Cow genome map
| Conread name: | Mixn-0010d11 | 
| Conread position: | 2-143 | 
| Cow position: | chr3:3096635-3096481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 35, 10 | 
| Conread position: | 3-140 | 
| Cow position: | chr3:19822255-19822108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 10, 106 | 
| Conread position: | 3-182 | 
| Cow position: | chr3:54050308-54050112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 11, 165 | 
| Conread position: | 3-196 | 
| Cow position: | chr3:13330061-13329857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 11, 117 | 
| Conread position: | 3-198 | 
| Cow position: | chr3:56658-56454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 11, 109 | 
| Conread position: | 3-198 | 
| Cow position: | chr3:27285936-27286155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 11, 207 | 
| Conread position: | 3-198 | 
| Cow position: | chr3:65413564-65413357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 11, 198 | 
| Conread position: | 3-198 | 
| Cow position: | chr3:78946128-78945912 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 11, 207 | 
| Conread position: | 3-198 | 
| Cow position: | chr3:80581382-80581587 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 11, 114 | 
| Conread position: | 3-201 | 
| Cow position: | chr3:11949642-11949430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 11, 170 | 
| Conread position: | 3-201 | 
| Cow position: | chr3:32869860-32870074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 11, 172 | 
| Conread position: | 3-411 | 
| Cow position: | chr3:33327418-33327826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 12, 35 | 
| Conread position: | 3-455 | 
| Cow position: | chr3:9641275-9641736 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 11, 187 | 
| Conread position: | 4-196 | 
| Cow position: | chr3:52863471-52863263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 10, 44 | 
| Conread position: | 4-196 | 
| Cow position: | chr3:82460895-82461099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 10, 114 | 
| Conread position: | 4-198 | 
| Cow position: | chr3:20437933-20437729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 9, 143 | 
| Conread position: | 4-198 | 
| Cow position: | chr3:22872340-22872124 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 4-198 | 
| Cow position: | chr3:70401617-70401824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 34, 8 | 
| Conread position: | 4-201 | 
| Cow position: | chr3:55190036-55189831 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 30, 8 | 
| Conread position: | 4-206 | 
| Cow position: | chr3:67044381-67044170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 65, 8 | 
| Conread position: | 4-419 | 
| Cow position: | chr3:66708361-66707945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 14, 8 | 
| Conread position: | 4-455 | 
| Cow position: | chr3:48629872-48629432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 38, 8 | 
| Conread position: | 4-457 | 
| Cow position: | chr3:27532948-27532497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 38, 8 | 
| Conread position: | 6-194 | 
| Cow position: | chr3:75711035-75711230 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 31, 6 | 
| Conread position: | 6-198 | 
| Cow position: | chr3:41367267-41367063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 32, 6 | 
| Conread position: | 6-198 | 
| Cow position: | chr3:59596920-59597106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 31, 6 | 
| Conread position: | 6-206 | 
| Cow position: | chr3:36927412-36927213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 12, 101 | 
| Conread position: | 6-417 | 
| Cow position: | chr3:54782296-54781883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 31, 5 | 
| Conread position: | 6-453 | 
| Cow position: | chr3:54434690-54435147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 31, 6 | 
| Conread position: | 8-456 | 
| Cow position: | chr3:37186552-37186990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 6, 30 | 
| Conread position: | 9-375 | 
| Cow position: | chr3:27546116-27545740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 5, 51 | 
| Conread position: | 12-179 | 
| Cow position: | chr3:83369043-83369222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 12-196 | 
| Cow position: | chr3:8147942-8147747 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 52, 190 | 
| Conread position: | 12-196 | 
| Cow position: | chr3:56704816-56704623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 25, 69 | 
| Conread position: | 12-197 | 
| Cow position: | chr3:42483621-42483823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 22, 194 | 
| Conread position: | 12-197 | 
| Cow position: | chr3:48252618-48252806 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 65, 25 | 
| Conread position: | 12-198 | 
| Cow position: | chr3:210043-210239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 31, 106 | 
| Conread position: | 12-198 | 
| Cow position: | chr3:23876719-23876918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 25, 190 | 
| Conread position: | 12-198 | 
| Cow position: | chr3:42177881-42178081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 51, 98 | 
| Conread position: | 12-199 | 
| Cow position: | chr3:7678394-7678592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 55, 188 | 
| Conread position: | 12-199 | 
| Cow position: | chr3:59001024-59000828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 25, 161 | 
| Conread position: | 12-201 | 
| Cow position: | chr3:22170910-22171113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 25, 191 | 
| Conread position: | 12-201 | 
| Cow position: | chr3:26553987-26553788 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 8, 21 | 
| Conread position: | 12-205 | 
| Cow position: | chr3:19708378-19708174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 57, 47 | 
| Conread position: | 12-384 | 
| Cow position: | chr3:55124557-55124195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 25, 151 | 
| Conread position: | 12-403 | 
| Cow position: | chr3:1830842-1830469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 21, 152 | 
| Conread position: | 12-404 | 
| Cow position: | chr3:53046936-53046555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 22, 185 | 
| Conread position: | 12-442 | 
| Cow position: | chr3:52836181-52835731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 54, 160 | 
| Conread position: | 12-449 | 
| Cow position: | chr3:28908474-28908041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 27, 184 | 
| Conread position: | 12-453 | 
| Cow position: | chr3:16343337-16343770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 22, 146 | 
| Conread position: | 12-453 | 
| Cow position: | chr3:45647858-45648283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 12, 114 | 
| Conread position: | 12-456 | 
| Cow position: | chr3:26903836-26904281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 23, 142 | 
| Conread position: | 12-457 | 
| Cow position: | chr3:64172166-64172605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 25, 139 | 
| Conread position: | 13-187 | 
| Cow position: | chr3:42367767-42367585 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 24, 59 | 
| Conread position: | 13-454 | 
| Cow position: | chr3:5374057-5374489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 51, 190 | 
| Conread position: | 14-353 | 
| Cow position: | chr3:66610115-66609787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 28, 92 | 
| Conread position: | 15-457 | 
| Cow position: | chr3:73764469-73764032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 52, 22 | 
| Conread position: | 16-457 | 
| Cow position: | chr3:15052212-15051769 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 55, 21 | 
| Conread position: | 20-198 | 
| Cow position: | chr3:84000341-84000536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 17, 186 | 
| Conread position: | 21-196 | 
| Cow position: | chr3:13577453-13577268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 48, 5 | 
| Conread position: | 41-453 | 
| Cow position: | chr3:18686668-18687080 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 29, 69 | 
| Conread position: | 70-444 | 
| Cow position: | chr3:83845694-83846061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 33, 89 | 
| Conread position: | 76-456 | 
| Cow position: | chr3:41718184-41718553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 21, 66 | 
| Conread position: | 80-416 | 
| Cow position: | chr3:8457464-8457776 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 94, 15 | 
| Conread position: | 80-447 | 
| Cow position: | chr3:74846929-74846552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 78, 15 | 
| Conread position: | 81-369 | 
| Cow position: | chr3:70334902-70334622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 16, 75 | 
| Conread position: | 82-453 | 
| Cow position: | chr3:8393741-8394092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 15, 28 | 
| Conread position: | 97-456 | 
| Cow position: | chr3:11920210-11919875 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 327, 48 | 
| Conread position: | 114-457 | 
| Cow position: | chr3:58765239-58764903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 60, 28 | 
| Conread position: | 139-454 | 
| Cow position: | chr3:61116995-61116692 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 25, 53 | 
| Conread position: | 214-450 | 
| Cow position: | chr3:18214219-18213981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 77, 29 | 
| Conread position: | 214-451 | 
| Cow position: | chr3:57830165-57829926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 40, 28 | 
| Conread position: | 214-456 | 
| Cow position: | chr3:3037005-3036759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 50, 17 | 
| Conread position: | 216-369 | 
| Cow position: | chr3:84175900-84175750 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 91, 20 | 
| Conread position: | 230-457 | 
| Cow position: | chr3:3818712-3818947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 41, 23 | 
| Conread position: | 230-457 | 
| Cow position: | chr3:18725722-18725480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 230-457 | 
| Cow position: | chr3:40100791-40100546 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 232-445 | 
| Cow position: | chr3:22271515-22271304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 192, 71 | 
| Conread position: | 232-452 | 
| Cow position: | chr3:73741941-73741710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 248-451 | 
| Cow position: | chr3:59608454-59608655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 62, 92 | 
| Conread position: | 248-453 | 
| Cow position: | chr3:5601215-5601008 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 60, 141 | 
| Conread position: | 257-453 | 
| Cow position: | chr3:9074386-9074185 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 9, 84 | 
| Conread position: | 257-457 | 
| Cow position: | chr3:15221558-15221354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 15, 84 | 
| Conread position: | 257-457 | 
| Cow position: | chr3:25076207-25076002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 7, 84 | 
| Conread position: | 265-451 | 
| Cow position: | chr3:909665-909472 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 265-457 | 
| Cow position: | chr3:37485828-37485636 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 43, 51 | 
| Conread position: | 266-406 | 
| Cow position: | chr3:48810676-48810536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 41, 113 | 
| Conread position: | 266-412 | 
| Cow position: | chr3:15153660-15153803 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 42, 117 | 
| Conread position: | 268-383 | 
| Cow position: | chr3:11705222-11705338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 117 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 268-453 | 
| Cow position: | chr3:38347164-38347340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 156, 39 | 
| Conread position: | 269-457 | 
| Cow position: | chr3:24300333-24300530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 39, 71 | 
| Conread position: | 269-457 | 
| Cow position: | chr3:57634233-57634429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 39, 17 | 
| Conread position: | 280-452 | 
| Cow position: | chr3:6900898-6901074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 28, 92 | 
| Conread position: | 280-456 | 
| Cow position: | chr3:36204536-36204708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 30, 60 | 
| Conread position: | 283-455 | 
| Cow position: | chr3:31247654-31247823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 115, 22 | 
| Conread position: | 300-454 | 
| Cow position: | chr3:62798781-62798627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 8, 124 | 
Show alignments to all cow chromosomes.
