Cow genome map

Conread name: Mixn-0010d11

Conread position: 1-198
Cow position: chr4:2141473-2141684 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 11

Conread position: 2-201
Cow position: chr4:23494659-23494866 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 153

Conread position: 2-422
Cow position: chr4:242952-243375 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 298
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 21, 127

Conread position: 2-449
Cow position: chr4:22115332-22115779 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 325
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 12, 206

Conread position: 3-139
Cow position: chr4:59976573-59976428 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 13

Conread position: 3-182
Cow position: chr4:11201544-11201743 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 3-182
Cow position: chr4:36755476-36755671 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 172

Conread position: 3-198
Cow position: chr4:43370123-43369913 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 3-198
Cow position: chr4:44612730-44612943 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 3-198
Cow position: chr4:51739976-51739770 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 12, 118

Conread position: 3-198
Cow position: chr4:63349747-63349536 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 105

Conread position: 3-201
Cow position: chr4:9845651-9845859 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 11, 30

Conread position: 3-201
Cow position: chr4:21392077-21391871 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 11, 194

Conread position: 3-361
Cow position: chr4:30574183-30574550 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 246
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 11, 98

Conread position: 3-376
Cow position: chr4:62772208-62771822 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 279
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 11, 215

Conread position: 3-453
Cow position: chr4:22528660-22528211 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 324
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 11, 217

Conread position: 3-456
Cow position: chr4:3440133-3440591 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 314
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 17, 168

Conread position: 4-205
Cow position: chr4:48499578-48499783 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 63, 8

Conread position: 4-385
Cow position: chr4:39128257-39128643 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 280
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 10, 207

Conread position: 4-394
Cow position: chr4:33433528-33433144 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 262
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 8

Conread position: 6-198
Cow position: chr4:22073577-22073376 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 6

Conread position: 6-198
Cow position: chr4:29237418-29237219 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 6

Conread position: 6-385
Cow position: chr4:27276809-27276438 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 270
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 6

Conread position: 6-386
Cow position: chr4:59785048-59785429 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 271
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 6

Conread position: 6-404
Cow position: chr4:23509319-23509718 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 277
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 205

Conread position: 8-457
Cow position: chr4:37935549-37935103 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 320
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 5, 196

Conread position: 12-171
Cow position: chr4:7704570-7704410 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 22, 86

Conread position: 12-195
Cow position: chr4:49629234-49629417 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 21, 93

Conread position: 12-196
Cow position: chr4:22236738-22236543 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 105

Conread position: 12-196
Cow position: chr4:52748721-52748521 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 25, 193

Conread position: 12-198
Cow position: chr4:11901826-11901622 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 21, 196

Conread position: 12-198
Cow position: chr4:19561432-19561623 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 10

Conread position: 12-198
Cow position: chr4:21064267-21064066 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 25, 145

Conread position: 12-198
Cow position: chr4:45662763-45662570 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 71

Conread position: 12-198
Cow position: chr4:46060683-46060883 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 21, 191

Conread position: 12-198
Cow position: chr4:66548016-66547830 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 148
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 21, 76

Conread position: 12-201
Cow position: chr4:2609975-2610173 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 155

Conread position: 12-201
Cow position: chr4:16339855-16339657 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 137

Conread position: 12-201
Cow position: chr4:65919355-65919555 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 188

Conread position: 12-202
Cow position: chr4:11090949-11090753 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 103

Conread position: 12-370
Cow position: chr4:33395951-33395607 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 248
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 56, 132

Conread position: 12-385
Cow position: chr4:32725961-32726330 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 266
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 56, 204

Conread position: 12-389
Cow position: chr4:47348569-47348936 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 263
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 21, 190

Conread position: 12-404
Cow position: chr4:44782111-44782497 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 281
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 30, 193

Conread position: 12-404
Cow position: chr4:54190837-54191212 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 264
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 26, 64

Conread position: 12-412
Cow position: chr4:31136492-31136885 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 276
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 98

Conread position: 12-412
Cow position: chr4:35981726-35982129 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 282
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 197

Conread position: 12-412
Cow position: chr4:37915592-37915207 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 270
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 184

Conread position: 12-438
Cow position: chr4:21365151-21365564 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 299
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 21, 64

Conread position: 12-441
Cow position: chr4:51122794-51123230 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 319
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 25, 166

Conread position: 12-444
Cow position: chr4:65842021-65841605 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 316
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 59, 16

Conread position: 12-455
Cow position: chr4:12560777-12561216 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 311
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 57, 17

Conread position: 12-455
Cow position: chr4:40823378-40822933 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 193

Conread position: 12-457
Cow position: chr4:961926-961466 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 206

Conread position: 13-196
Cow position: chr4:43495640-43495839 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 185

Conread position: 14-198
Cow position: chr4:46597122-46597317 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 186

Conread position: 14-201
Cow position: chr4:34310716-34310508 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 23, 196

Conread position: 14-454
Cow position: chr4:56570544-56570982 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 312
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 192

Conread position: 15-201
Cow position: chr4:51408225-51408031 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 92

Conread position: 15-213
Cow position: chr4:42267002-42266798 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 89

Conread position: 16-198
Cow position: chr4:35940270-35940067 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 21, 194

Conread position: 18-369
Cow position: chr4:59008626-59008265 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 253
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 15, 185

Conread position: 19-385
Cow position: chr4:19322335-19321972 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 264
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 18, 196

Conread position: 21-333
Cow position: chr4:26549209-26549536 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 225
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 227

Conread position: 32-198
Cow position: chr4:29291281-29291458 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 38, 168

Conread position: 47-198
Cow position: chr4:25359392-25359549 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 50, 23

Conread position: 76-198
Cow position: chr4:22860894-22860774 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 112, 21

Conread position: 76-453
Cow position: chr4:41602660-41603019 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 275
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 21, 113

Conread position: 79-442
Cow position: chr4:17774537-17774181 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 243
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 97

Conread position: 81-386
Cow position: chr4:51768934-51769210 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 210
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 91-453
Cow position: chr4:51605776-51605443 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 219, 9

Conread position: 95-456
Cow position: chr4:23758639-23758981 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 252
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 69, 97

Conread position: 97-457
Cow position: chr4:23166741-23167078 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 263
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 46, 95

Conread position: 127-455
Cow position: chr4:5913482-5913167 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 243
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 16, 65

Conread position: 212-386
Cow position: chr4:13026240-13026408 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 96, 23

Conread position: 230-453
Cow position: chr4:24432929-24433156 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 38

Conread position: 230-457
Cow position: chr4:26373725-26373499 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 23, 112

Conread position: 231-421
Cow position: chr4:21862927-21862727 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 34, 85

Conread position: 231-456
Cow position: chr4:39616919-39617141 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 23, 48

Conread position: 240-457
Cow position: chr4:63262248-63262025 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 151

Conread position: 246-383
Cow position: chr4:21874766-21874906 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 255-405
Cow position: chr4:24481696-24481546 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 54

Conread position: 259-454
Cow position: chr4:52087907-52088104 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 156
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 139, 75

Conread position: 263-446
Cow position: chr4:58858185-58858008 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 119, 0

Conread position: 265-447
Cow position: chr4:45234888-45234701 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 265-456
Cow position: chr4:63472090-63471892 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 265-457
Cow position: chr4:21063805-21063607 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 266-384
Cow position: chr4:20898-21017 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 266-404
Cow position: chr4:56239874-56239736 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 127

Conread position: 266-413
Cow position: chr4:59377895-59378043 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 117

Conread position: 266-432
Cow position: chr4:45636152-45636315 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 125

Conread position: 266-457
Cow position: chr4:64029103-64029292 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 132, 27

Conread position: 269-386
Cow position: chr4:46702669-46702551 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 271-386
Cow position: chr4:51708056-51708170 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 108

Conread position: 283-454
Cow position: chr4:18956655-18956487 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 25, 116

Conread position: 283-457
Cow position: chr4:10836179-10836357 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 287-453
Cow position: chr4:43369622-43369451 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 22, 95

Conread position: 289-453
Cow position: chr4:45115770-45115602 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 51

Conread position: 295-455
Cow position: chr4:34762319-34762157 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 13, 45

Conread position: 303-457
Cow position: chr4:20599957-20600116 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 318-457
Cow position: chr4:63955107-63954970 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 64

Show alignments to all cow chromosomes.