Cow genome map

Conread name: Mixn-0010d11

Conread position: 1-161
Cow position: chr8:43986467-43986299 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 13

Conread position: 1-183
Cow position: chr8:29765000-29765200 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 11

Conread position: 2-138
Cow position: chr8:29947801-29947656 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 3-194
Cow position: chr8:54572391-54572598 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 35

Conread position: 3-198
Cow position: chr8:39845378-39845576 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 166

Conread position: 3-201
Cow position: chr8:10456216-10456425 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 10, 35

Conread position: 3-201
Cow position: chr8:32491303-32491516 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 42

Conread position: 3-201
Cow position: chr8:61123533-61123344 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 48

Conread position: 3-202
Cow position: chr8:24237502-24237713 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 167

Conread position: 3-457
Cow position: chr8:36505115-36505574 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 315
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 11, 26

Conread position: 4-194
Cow position: chr8:36858352-36858152 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 8

Conread position: 4-198
Cow position: chr8:26600311-26600508 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 106

Conread position: 4-377
Cow position: chr8:11606082-11606442 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 267
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 8

Conread position: 4-402
Cow position: chr8:21827000-21826597 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 274
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 8

Conread position: 4-457
Cow position: chr8:9131179-9130728 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 298
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 8

Conread position: 4-457
Cow position: chr8:13809959-13810402 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 320
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 31, 8

Conread position: 4-457
Cow position: chr8:49600168-49599732 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 8

Conread position: 5-191
Cow position: chr8:56824268-56824062 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 6-196
Cow position: chr8:4940559-4940354 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 31, 6

Conread position: 6-198
Cow position: chr8:31253560-31253769 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 37, 6

Conread position: 6-200
Cow position: chr8:42139294-42139087 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 31

Conread position: 6-205
Cow position: chr8:33974324-33974521 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 6

Conread position: 6-453
Cow position: chr8:1107442-1106997 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 317
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 7, 160

Conread position: 6-455
Cow position: chr8:58520052-58520502 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 322
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 28, 6

Conread position: 7-196
Cow position: chr8:44437516-44437721 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 6, 198

Conread position: 8-453
Cow position: chr8:55304825-55305277 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 331
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 6, 176

Conread position: 9-355
Cow position: chr8:22755775-22756114 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 242
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 5, 29

Conread position: 12-182
Cow position: chr8:21224312-21224128 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 137

Conread position: 12-198
Cow position: chr8:5450826-5450654 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 12-198
Cow position: chr8:20836882-20837082 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 25, 191

Conread position: 12-198
Cow position: chr8:21077353-21077544 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 25

Conread position: 12-199
Cow position: chr8:19642225-19642429 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 194

Conread position: 12-201
Cow position: chr8:3147783-3147582 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 25, 103

Conread position: 12-201
Cow position: chr8:9624520-9624719 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 146

Conread position: 12-201
Cow position: chr8:19430086-19429891 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 25, 135

Conread position: 12-201
Cow position: chr8:35436859-35436654 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 162

Conread position: 12-333
Cow position: chr8:20212752-20212429 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 235
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 21, 194

Conread position: 12-385
Cow position: chr8:6233143-6232768 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 261
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 189

Conread position: 12-405
Cow position: chr8:3891671-3891285 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 276
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 25, 150

Conread position: 12-411
Cow position: chr8:3015226-3015630 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 277
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 195

Conread position: 12-444
Cow position: chr8:13222087-13221669 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 295
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 21, 78

Conread position: 12-445
Cow position: chr8:53383160-53383601 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 304
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 22, 140

Conread position: 12-452
Cow position: chr8:8134753-8134306 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 332
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 25, 200

Conread position: 12-454
Cow position: chr8:26228713-26229143 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 155

Conread position: 16-201
Cow position: chr8:42575451-42575657 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 194

Conread position: 16-389
Cow position: chr8:3704381-3704749 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 265
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 21, 100

Conread position: 17-386
Cow position: chr8:8010664-8011028 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 265
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 19, 142

Conread position: 18-182
Cow position: chr8:1169507-1169339 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 143

Conread position: 18-196
Cow position: chr8:46214306-46214114 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 8

Conread position: 27-197
Cow position: chr8:11593842-11594027 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 9, 111

Conread position: 29-201
Cow position: chr8:41264082-41264266 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 11

Conread position: 32-432
Cow position: chr8:35504459-35504068 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 280
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 169

Conread position: 76-370
Cow position: chr8:11278287-11277996 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 198
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 82

Conread position: 78-457
Cow position: chr8:51695537-51695185 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 275
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 229, 8

Conread position: 80-445
Cow position: chr8:57387761-57388118 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 246
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 77, 15

Conread position: 94-452
Cow position: chr8:53633379-53633026 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 51

Conread position: 95-452
Cow position: chr8:21137414-21137088 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 251
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 65, 50

Conread position: 230-432
Cow position: chr8:47461821-47462032 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 22, 208

Conread position: 230-446
Cow position: chr8:42575649-42575870 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 23, 85

Conread position: 230-455
Cow position: chr8:15686442-15686204 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 184
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 19, 0

Conread position: 231-454
Cow position: chr8:31646055-31645825 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 30, 104

Conread position: 250-435
Cow position: chr8:55829359-55829171 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 13, 95

Conread position: 250-455
Cow position: chr8:29413879-29414085 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 165
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 17, 176

Conread position: 250-457
Cow position: chr8:27294716-27294924 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 13, 176

Conread position: 261-452
Cow position: chr8:39017704-39017899 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 79

Conread position: 261-453
Cow position: chr8:33510623-33510425 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 185

Conread position: 261-455
Cow position: chr8:46850364-46850164 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 151

Conread position: 261-456
Cow position: chr8:20892332-20892526 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 164

Conread position: 262-455
Cow position: chr8:6469166-6468971 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 46, 87

Conread position: 264-457
Cow position: chr8:15536995-15536798 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 44, 13

Conread position: 265-452
Cow position: chr8:11594040-11594232 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 152
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 43, 0

Conread position: 266-388
Cow position: chr8:10846243-10846366 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 266-455
Cow position: chr8:55348341-55348535 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 119, 41

Conread position: 267-450
Cow position: chr8:32827668-32827488 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 148
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 41, 135

Conread position: 268-456
Cow position: chr8:37709156-37709351 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 38, 161

Conread position: 269-420
Cow position: chr8:20832317-20832163 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 280-444
Cow position: chr8:16971358-16971200 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 104

Conread position: 282-437
Cow position: chr8:61216815-61216655 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 307-411
Cow position: chr8:22653344-22653448 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 332-445
Cow position: chr8:54195868-54195987 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 66, 0

Show alignments to all cow chromosomes.