Cow genome map

Conread name: Mixn-0014o22

Conread position: 1-112
Cow position: chr19:23488114-23488002 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 43

Conread position: 1-120
Cow position: chr19:10195768-10195646 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 1-140
Cow position: chr19:12652230-12652083 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 1-156
Cow position: chr19:12209578-12209737 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 1-160
Cow position: chr19:22391572-22391410 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 133
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 49, 0

Conread position: 1-167
Cow position: chr19:5026837-5027006 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 141
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 49, 0

Conread position: 1-175
Cow position: chr19:930174-930000 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 49, 84

Conread position: 1-182
Cow position: chr19:25571804-25571987 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 49, 168

Conread position: 1-229
Cow position: chr19:9118165-9117937 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-240
Cow position: chr19:16316852-16317094 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 172

Conread position: 1-247
Cow position: chr19:41204872-41205119 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-261
Cow position: chr19:20403639-20403376 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 1-262
Cow position: chr19:1564441-1564704 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-262
Cow position: chr19:5732850-5732589 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 106

Conread position: 1-262
Cow position: chr19:40849134-40849399 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 150

Conread position: 1-264
Cow position: chr19:175823-175558 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-264
Cow position: chr19:16478512-16478776 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 95

Conread position: 1-264
Cow position: chr19:33876771-33876506 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr19:374359-374626 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 49, 133

Conread position: 1-270
Cow position: chr19:405503-405233 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 172

Conread position: 1-270
Cow position: chr19:435983-436253 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 134

Conread position: 1-270
Cow position: chr19:730636-730906 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-270
Cow position: chr19:776868-776598 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 167

Conread position: 1-270
Cow position: chr19:5902382-5902111 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr19:7345389-7345118 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr19:8206654-8206913 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 40

Conread position: 1-270
Cow position: chr19:10613583-10613312 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr19:12776464-12776200 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 104

Conread position: 1-270
Cow position: chr19:19389189-19388918 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 171

Conread position: 1-270
Cow position: chr19:20611689-20611418 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr19:22512600-22512329 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr19:24734498-24734227 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr19:28596731-28596459 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-270
Cow position: chr19:30037552-30037823 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr19:33119369-33119640 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr19:33528202-33527931 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr19:33573365-33573633 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 42

Conread position: 1-270
Cow position: chr19:40016233-40016502 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 13

Conread position: 1-270
Cow position: chr19:43148936-43148665 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr19:48477924-48477658 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 61

Conread position: 1-270
Cow position: chr19:55164302-55164573 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr19:55421401-55421128 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 49, 76

Conread position: 1-271
Cow position: chr19:36351624-36351359 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 89

Conread position: 1-274
Cow position: chr19:2269946-2270220 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 173

Conread position: 1-274
Cow position: chr19:4388938-4388664 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr19:28794970-28795238 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 89

Conread position: 1-274
Cow position: chr19:39182185-39182459 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr19:45464489-45464227 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 106, 43

Conread position: 1-277
Cow position: chr19:207855-207578 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-297
Cow position: chr19:48626414-48626118 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-312
Cow position: chr19:743352-743661 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 220
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 95, 36

Conread position: 2-260
Cow position: chr19:39394555-39394295 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 167

Conread position: 3-270
Cow position: chr19:41686-41418 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 168

Conread position: 3-270
Cow position: chr19:39750566-39750307 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 47, 0

Conread position: 3-271
Cow position: chr19:39339715-39339984 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 112

Conread position: 4-270
Cow position: chr19:55843356-55843088 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 168

Conread position: 8-212
Cow position: chr19:32140345-32140142 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 51, 67

Conread position: 8-270
Cow position: chr19:5044338-5044590 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 52, 21

Conread position: 8-270
Cow position: chr19:55378243-55377979 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 164

Conread position: 14-270
Cow position: chr19:164790-165045 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 36, 158

Conread position: 16-275
Cow position: chr19:1585857-1585597 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 153

Show alignments to all cow chromosomes.