Cow genome map

Conread name: Mixn-0015i14

Conread position: 1-533
Cow position: chr11:17860570-17860036 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 23

Conread position: 2-348
Cow position: chr11:28226244-28225899 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 241
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 138, 18

Conread position: 2-376
Cow position: chr11:74929364-74929739 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 164

Conread position: 2-390
Cow position: chr11:6343993-6344378 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 254
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 142, 18

Conread position: 2-390
Cow position: chr11:21620964-21621355 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 18

Conread position: 2-415
Cow position: chr11:15988830-15989243 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 18

Conread position: 2-415
Cow position: chr11:39032670-39033084 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 18

Conread position: 2-505
Cow position: chr11:64043834-64044326 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 18

Conread position: 2-509
Cow position: chr11:23128967-23128444 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 28

Conread position: 2-510
Cow position: chr11:10213971-10213472 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 18

Conread position: 2-512
Cow position: chr11:76114238-76114742 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 18

Conread position: 3-348
Cow position: chr11:31885098-31885446 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 17

Conread position: 3-348
Cow position: chr11:32076556-32076210 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 17

Conread position: 3-354
Cow position: chr11:66945058-66944717 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 244
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 40, 17

Conread position: 3-371
Cow position: chr11:45677694-45678055 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 17

Conread position: 3-376
Cow position: chr11:36929714-36929343 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 17

Conread position: 3-389
Cow position: chr11:26433080-26433469 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 256
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 144, 17

Conread position: 3-414
Cow position: chr11:67951361-67950969 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 17

Conread position: 3-415
Cow position: chr11:42491276-42490868 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 272
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 140, 19

Conread position: 3-415
Cow position: chr11:84199097-84198676 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 17

Conread position: 3-426
Cow position: chr11:5989783-5989356 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 290
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 137, 17

Conread position: 3-426
Cow position: chr11:58973253-58972826 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 17

Conread position: 3-429
Cow position: chr11:33601102-33600677 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 298
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 140, 17

Conread position: 3-448
Cow position: chr11:65430661-65431089 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 17

Conread position: 3-452
Cow position: chr11:42793373-42792934 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 17

Conread position: 3-469
Cow position: chr11:11534311-11533873 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 17

Conread position: 3-515
Cow position: chr11:76369933-76369419 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 17

Conread position: 4-522
Cow position: chr11:26067593-26067076 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 16

Conread position: 4-648
Cow position: chr11:48271787-48272453 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 51

Conread position: 5-367
Cow position: chr11:62979065-62979435 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 15

Conread position: 5-367
Cow position: chr11:68571084-68570719 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 15

Conread position: 5-376
Cow position: chr11:3703908-3704260 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 18

Conread position: 5-391
Cow position: chr11:81066994-81066613 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 15

Conread position: 5-400
Cow position: chr11:66897211-66896817 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 19

Conread position: 5-406
Cow position: chr11:85764547-85764930 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 275
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 356, 15

Conread position: 5-415
Cow position: chr11:47595901-47596298 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 274
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 147, 15

Conread position: 5-417
Cow position: chr11:4412432-4412016 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 25

Conread position: 5-427
Cow position: chr11:1486282-1485859 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 15

Conread position: 5-427
Cow position: chr11:18389271-18388857 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 11

Conread position: 5-432
Cow position: chr11:16251668-16251222 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 15

Conread position: 5-460
Cow position: chr11:8495625-8496079 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 5-460
Cow position: chr11:44818696-44819140 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 25

Conread position: 5-471
Cow position: chr11:43524211-43524666 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 25

Conread position: 5-474
Cow position: chr11:42358712-42359175 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 15

Conread position: 5-502
Cow position: chr11:40819055-40818537 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 15

Conread position: 5-502
Cow position: chr11:44036304-44036809 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 15

Conread position: 5-503
Cow position: chr11:50153227-50152723 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 16

Conread position: 5-505
Cow position: chr11:35363083-35363573 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 74

Conread position: 5-505
Cow position: chr11:63469475-63469968 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 15

Conread position: 5-511
Cow position: chr11:19890472-19890938 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 354
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 141, 15

Conread position: 5-512
Cow position: chr11:3393622-3393110 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 15

Conread position: 5-516
Cow position: chr11:15286030-15285511 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 15

Conread position: 5-527
Cow position: chr11:4731927-4732457 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 19

Conread position: 5-532
Cow position: chr11:59902486-59903008 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 15

Conread position: 5-560
Cow position: chr11:62151290-62150746 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 15

Conread position: 5-621
Cow position: chr11:43430872-43430255 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 122

Conread position: 5-635
Cow position: chr11:69118884-69119515 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 152

Conread position: 5-636
Cow position: chr11:18509422-18508810 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 168

Conread position: 5-656
Cow position: chr11:61454947-61454288 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 12

Conread position: 7-390
Cow position: chr11:68130925-68131308 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 13

Conread position: 8-349
Cow position: chr11:70838706-70838364 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 12

Conread position: 8-365
Cow position: chr11:67931885-67931546 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 136, 16

Conread position: 8-368
Cow position: chr11:32749698-32750062 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 22

Conread position: 8-372
Cow position: chr11:34412690-34413050 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 16

Conread position: 8-393
Cow position: chr11:62750159-62749774 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 12

Conread position: 8-432
Cow position: chr11:26535355-26535785 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 297
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 107, 166

Conread position: 8-433
Cow position: chr11:10076365-10076775 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 9

Conread position: 8-453
Cow position: chr11:8339814-8339366 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 12

Conread position: 8-471
Cow position: chr11:32198532-32199000 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 12

Conread position: 8-472
Cow position: chr11:39115093-39115552 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 12

Conread position: 8-500
Cow position: chr11:36986562-36987037 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 12

Conread position: 8-503
Cow position: chr11:43361199-43360693 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 12

Conread position: 8-505
Cow position: chr11:13061628-13061142 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 12

Conread position: 8-510
Cow position: chr11:44637170-44636656 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 12

Conread position: 8-510
Cow position: chr11:59872517-59873026 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 12

Conread position: 8-511
Cow position: chr11:58587932-58588441 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 159

Conread position: 8-512
Cow position: chr11:17279066-17278576 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 15

Conread position: 8-522
Cow position: chr11:43897726-43898248 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 12

Conread position: 8-526
Cow position: chr11:67746872-67747393 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 12

Conread position: 8-528
Cow position: chr11:1625627-1625108 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 12

Conread position: 8-528
Cow position: chr11:35579845-35580375 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 15

Conread position: 8-531
Cow position: chr11:7589783-7590303 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 12

Conread position: 8-531
Cow position: chr11:75480444-75479905 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 12

Conread position: 8-532
Cow position: chr11:44031589-44032131 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 12

Conread position: 8-534
Cow position: chr11:42292244-42291724 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 12

Conread position: 8-539
Cow position: chr11:17321252-17321779 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 12

Conread position: 8-545
Cow position: chr11:17831642-17831090 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 12

Conread position: 8-552
Cow position: chr11:77759166-77758622 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 12

Conread position: 8-554
Cow position: chr11:25386661-25387207 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 12

Conread position: 8-622
Cow position: chr11:951865-952468 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 12

Conread position: 8-622
Cow position: chr11:59702075-59702697 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 12

Conread position: 8-623
Cow position: chr11:44233957-44234558 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 11

Conread position: 9-372
Cow position: chr11:58614245-58614615 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 25

Conread position: 9-377
Cow position: chr11:7334124-7333763 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 253
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 115, 24

Conread position: 9-432
Cow position: chr11:17968984-17968562 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 11

Conread position: 9-439
Cow position: chr11:2309463-2309899 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 165

Conread position: 9-445
Cow position: chr11:6154007-6154440 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 11

Conread position: 9-471
Cow position: chr11:3769696-3769251 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 116

Conread position: 9-522
Cow position: chr11:64334449-64334947 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 14

Conread position: 9-523
Cow position: chr11:74316277-74316819 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 11

Conread position: 9-534
Cow position: chr11:8525510-8524994 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 11

Conread position: 10-364
Cow position: chr11:65694245-65693894 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 112

Conread position: 10-474
Cow position: chr11:16262458-16261964 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 320
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 126, 274

Conread position: 11-366
Cow position: chr11:22932376-22932033 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 254
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 122, 7

Conread position: 11-377
Cow position: chr11:29916141-29916487 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 260
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 110, 19

Conread position: 11-377
Cow position: chr11:48901476-48901124 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 11-383
Cow position: chr11:31866193-31866562 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 251
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 132, 9

Conread position: 11-461
Cow position: chr11:47193126-47193562 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 121

Conread position: 11-471
Cow position: chr11:65409564-65409096 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 9

Conread position: 11-512
Cow position: chr11:52297630-52297121 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 125

Conread position: 11-513
Cow position: chr11:38638719-38639212 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 9

Conread position: 11-538
Cow position: chr11:7924991-7924468 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 9

Conread position: 11-545
Cow position: chr11:21894555-21894032 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 6

Conread position: 11-618
Cow position: chr11:23138477-23137848 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 9

Conread position: 11-643
Cow position: chr11:62225573-62226216 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 9

Conread position: 12-361
Cow position: chr11:71846754-71846405 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 6

Conread position: 12-368
Cow position: chr11:77240956-77241318 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 8

Conread position: 12-371
Cow position: chr11:56797134-56796791 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 246
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 115, 5

Conread position: 12-372
Cow position: chr11:27386745-27386390 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 8

Conread position: 12-376
Cow position: chr11:11752921-11752562 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 150

Conread position: 12-376
Cow position: chr11:83196096-83196454 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 10

Conread position: 12-407
Cow position: chr11:41577411-41577024 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 153

Conread position: 12-430
Cow position: chr11:50197850-50197414 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 33

Conread position: 12-466
Cow position: chr11:8841148-8840695 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 8

Conread position: 12-475
Cow position: chr11:35881503-35881972 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 42

Conread position: 12-525
Cow position: chr11:77705358-77705863 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 162

Conread position: 13-390
Cow position: chr11:38843158-38843532 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 174

Conread position: 13-462
Cow position: chr11:6835140-6835582 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 347, 11

Conread position: 13-558
Cow position: chr11:28643683-28644233 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 33

Conread position: 16-376
Cow position: chr11:42232210-42232561 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 243
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 297, 119

Conread position: 17-376
Cow position: chr11:29947341-29946974 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 264
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 5, 244

Conread position: 17-523
Cow position: chr11:27248092-27248601 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 27

Conread position: 18-344
Cow position: chr11:46413170-46413500 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 128, 193

Conread position: 19-322
Cow position: chr11:10294197-10294493 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 104, 140

Conread position: 19-371
Cow position: chr11:71455409-71455744 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 251
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 258, 96

Conread position: 19-465
Cow position: chr11:33754318-33753857 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 319
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 115, 240

Conread position: 19-502
Cow position: chr11:34112864-34113355 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 122

Conread position: 19-533
Cow position: chr11:30191764-30192296 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 152

Conread position: 19-538
Cow position: chr11:4206899-4207434 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 248

Conread position: 19-541
Cow position: chr11:73512818-73512317 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 26

Conread position: 19-560
Cow position: chr11:44576138-44575605 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 107

Conread position: 20-348
Cow position: chr11:26592227-26591898 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 16

Conread position: 20-348
Cow position: chr11:46692598-46692923 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 235
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 21, 146

Conread position: 20-348
Cow position: chr11:65407628-65407950 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 229
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 127, 68

Conread position: 20-384
Cow position: chr11:76205991-76206349 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 145

Conread position: 20-390
Cow position: chr11:34278633-34279005 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 169

Conread position: 20-390
Cow position: chr11:38599173-38598801 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 169

Conread position: 20-415
Cow position: chr11:52424680-52425072 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 262
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 57, 173

Conread position: 20-415
Cow position: chr11:66389464-66389067 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 266
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 122, 169

Conread position: 22-372
Cow position: chr11:17981012-17981364 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 251
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 112, 143

Conread position: 22-446
Cow position: chr11:81174494-81174918 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 144

Conread position: 23-326
Cow position: chr11:55117078-55117388 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 96

Conread position: 23-401
Cow position: chr11:21819848-21819464 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 262
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 19, 237

Conread position: 24-390
Cow position: chr11:68632089-68631721 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 174

Conread position: 24-460
Cow position: chr11:25336677-25337112 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 153

Conread position: 25-358
Cow position: chr11:41239665-41239333 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 141

Conread position: 25-361
Cow position: chr11:44642674-44642348 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 109

Conread position: 26-457
Cow position: chr11:53778224-53778660 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 89

Conread position: 26-462
Cow position: chr11:85390318-85389880 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 280
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 128, 66

Conread position: 26-471
Cow position: chr11:61202761-61203223 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 156

Conread position: 26-509
Cow position: chr11:49152548-49153044 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 90

Conread position: 26-513
Cow position: chr11:80923727-80923222 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 19

Conread position: 26-538
Cow position: chr11:33413841-33414362 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 156

Conread position: 27-437
Cow position: chr11:87147661-87147245 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 163

Conread position: 27-459
Cow position: chr11:10302594-10302157 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 295
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 5, 54

Conread position: 27-467
Cow position: chr11:3833739-3833309 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 146

Conread position: 27-508
Cow position: chr11:23251995-23251498 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 139

Conread position: 28-531
Cow position: chr11:84386027-84385520 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 115

Conread position: 31-372
Cow position: chr11:49105667-49106009 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 35

Conread position: 31-507
Cow position: chr11:34467223-34467661 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 14

Conread position: 31-512
Cow position: chr11:83397541-83398005 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 323
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 264, 71

Conread position: 33-376
Cow position: chr11:5032162-5031818 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 133

Conread position: 34-364
Cow position: chr11:47586731-47586405 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 73

Conread position: 34-367
Cow position: chr11:57047347-57047023 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 227
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 113, 121

Conread position: 34-375
Cow position: chr11:3174997-3175337 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 231
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 111, 85

Conread position: 34-378
Cow position: chr11:61137582-61137245 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 245
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 108, 131

Conread position: 34-384
Cow position: chr11:31352955-31352604 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 131

Conread position: 34-502
Cow position: chr11:68207232-68206752 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 206

Conread position: 37-367
Cow position: chr11:30110572-30110909 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 245
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 109, 235

Conread position: 37-510
Cow position: chr11:20601858-20602322 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 194

Conread position: 38-496
Cow position: chr11:259564-259089 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 7

Conread position: 39-395
Cow position: chr11:5197454-5197097 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 108, 86

Conread position: 39-508
Cow position: chr11:8428104-8428608 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 231

Conread position: 39-541
Cow position: chr11:6594627-6594112 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 140

Conread position: 40-372
Cow position: chr11:15503723-15504058 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 132

Conread position: 42-345
Cow position: chr11:10875646-10875951 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 123

Conread position: 42-465
Cow position: chr11:62490058-62490490 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 40

Conread position: 44-546
Cow position: chr11:2091973-2092461 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 121

Conread position: 45-377
Cow position: chr11:41599101-41598768 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 133

Conread position: 45-527
Cow position: chr11:10094969-10095456 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 121

Conread position: 46-384
Cow position: chr11:33256092-33255754 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 238
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 97, 21

Conread position: 46-553
Cow position: chr11:48649583-48650111 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 58

Conread position: 54-376
Cow position: chr11:37974561-37974881 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 177

Conread position: 54-433
Cow position: chr11:73478259-73478631 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 261
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 65, 58

Conread position: 55-502
Cow position: chr11:35874337-35873913 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 72

Conread position: 56-462
Cow position: chr11:16910731-16910311 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 416

Conread position: 56-531
Cow position: chr11:38235875-38236370 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 209

Conread position: 57-497
Cow position: chr11:64638882-64638442 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 318
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 87, 11

Conread position: 58-460
Cow position: chr11:26483361-26483758 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 52

Conread position: 58-591
Cow position: chr11:63847493-63848016 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 17

Conread position: 60-513
Cow position: chr11:64090444-64089997 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 75

Conread position: 61-471
Cow position: chr11:4323009-4323416 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 112

Conread position: 61-533
Cow position: chr11:35684856-35684383 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 113

Conread position: 62-407
Cow position: chr11:37068660-37068329 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 104

Conread position: 63-428
Cow position: chr11:65591522-65591889 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 244
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 89, 139

Conread position: 63-474
Cow position: chr11:54333977-54334389 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 104

Conread position: 63-509
Cow position: chr11:68905405-68904982 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 294
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 304, 77

Conread position: 64-419
Cow position: chr11:82232069-82232418 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 221
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 80, 100

Conread position: 66-451
Cow position: chr11:48042405-48041995 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 288
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 131, 66

Conread position: 67-451
Cow position: chr11:14649649-14649276 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 275
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 219, 40

Conread position: 68-344
Cow position: chr11:81614979-81614713 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 60, 74

Conread position: 71-372
Cow position: chr11:47165481-47165192 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 101

Conread position: 71-651
Cow position: chr11:41812259-41811674 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 102

Conread position: 72-367
Cow position: chr11:53130469-53130758 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 53

Conread position: 75-371
Cow position: chr11:955021-955316 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 91

Conread position: 75-496
Cow position: chr11:70619711-70620127 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 305
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 58, 99

Conread position: 78-395
Cow position: chr11:44004509-44004827 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 214
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 74, 94

Conread position: 78-539
Cow position: chr11:56518650-56518188 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 55

Conread position: 80-533
Cow position: chr11:42836298-42835832 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 306
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 53, 83

Conread position: 82-432
Cow position: chr11:59156211-59155859 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 265
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 51, 98

Conread position: 85-415
Cow position: chr11:15836502-15836832 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 222
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 58, 88

Conread position: 85-510
Cow position: chr11:39499043-39499453 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 311
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 60, 80

Conread position: 87-345
Cow position: chr11:86926253-86926002 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 197
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 28, 146

Conread position: 87-662
Cow position: chr11:73924890-73924313 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 78

Conread position: 91-367
Cow position: chr11:43913895-43914160 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 56, 64

Conread position: 93-469
Cow position: chr11:80761702-80761322 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 265
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 77

Conread position: 93-471
Cow position: chr11:51755990-51756357 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 264
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 52, 83

Conread position: 93-512
Cow position: chr11:30934094-30934516 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 276
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 39, 107

Conread position: 94-503
Cow position: chr11:18698548-18698970 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 21

Conread position: 95-429
Cow position: chr11:31413127-31413467 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 235
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 50, 70

Conread position: 95-467
Cow position: chr11:30120986-30120608 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 266
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 52, 79

Conread position: 98-622
Cow position: chr11:36848622-36849139 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 359
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 188, 48

Conread position: 100-376
Cow position: chr11:9837419-9837144 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 211
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 16, 21

Conread position: 103-513
Cow position: chr11:49935055-49934630 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 284
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 23, 59

Conread position: 104-500
Cow position: chr11:41986358-41985958 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 266
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 41, 51

Conread position: 105-343
Cow position: chr11:60302271-60302038 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 181
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 60

Conread position: 105-459
Cow position: chr11:287647-287290 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 248
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 61

Conread position: 105-460
Cow position: chr11:50111878-50112225 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 42, 68

Conread position: 105-512
Cow position: chr11:34962749-34963169 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 287
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 61

Conread position: 105-531
Cow position: chr11:23232826-23232405 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 59

Conread position: 106-377
Cow position: chr11:62019913-62019636 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 20, 0

Conread position: 106-498
Cow position: chr11:32595154-32595541 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 197

Conread position: 106-511
Cow position: chr11:18572494-18572896 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 272
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 27, 56

Conread position: 108-531
Cow position: chr11:71868914-71868484 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 299
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 35, 65

Conread position: 108-532
Cow position: chr11:8988540-8988112 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 57

Conread position: 109-502
Cow position: chr11:36182379-36182784 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 143

Conread position: 110-414
Cow position: chr11:32609686-32610001 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 226
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 41, 21

Conread position: 111-510
Cow position: chr11:12111769-12111361 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 272
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 22

Conread position: 113-524
Cow position: chr11:78381350-78380953 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 277
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 12, 50

Conread position: 116-371
Cow position: chr11:25319748-25320004 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 116-471
Cow position: chr11:70273001-70273364 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 264
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 27, 47

Conread position: 116-510
Cow position: chr11:1071396-1070992 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 140

Conread position: 120-372
Cow position: chr11:65857559-65857812 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 32, 111

Conread position: 120-629
Cow position: chr11:84724353-84724866 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 326
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 37, 287

Conread position: 121-410
Cow position: chr11:1485658-1485360 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 31, 228

Conread position: 122-327
Cow position: chr11:6639215-6639416 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 44

Conread position: 125-460
Cow position: chr11:3719958-3720300 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 237
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 22, 28

Conread position: 126-355
Cow position: chr11:7315419-7315192 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 47

Conread position: 126-462
Cow position: chr11:13190927-13191283 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 251
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 17, 40

Conread position: 129-460
Cow position: chr11:81300900-81300574 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 237
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 13, 42

Conread position: 130-348
Cow position: chr11:39162988-39163208 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 22, 68

Conread position: 131-372
Cow position: chr11:41983730-41983501 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 38

Conread position: 131-502
Cow position: chr11:17083579-17083220 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 8

Conread position: 132-372
Cow position: chr11:41549622-41549380 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 14

Conread position: 132-372
Cow position: chr11:57111590-57111355 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 9, 30

Conread position: 132-450
Cow position: chr11:63518731-63519041 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 221
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 7, 31

Conread position: 132-465
Cow position: chr11:65827016-65826699 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 227
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 31

Conread position: 132-500
Cow position: chr11:73354336-73353972 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 7

Conread position: 132-513
Cow position: chr11:60470462-60470098 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 257
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 29

Conread position: 132-560
Cow position: chr11:21497258-21497669 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 272
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 9, 37

Conread position: 133-376
Cow position: chr11:20491292-20491526 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 29

Conread position: 133-496
Cow position: chr11:50778088-50778450 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 29

Conread position: 134-469
Cow position: chr11:50951270-50951612 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 244
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 10, 27

Conread position: 134-538
Cow position: chr11:30475721-30476125 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 272
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 130, 5

Conread position: 134-544
Cow position: chr11:377930-377509 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 36

Conread position: 135-376
Cow position: chr11:75355330-75355564 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 190
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 6, 34

Conread position: 135-509
Cow position: chr11:41271859-41272234 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 260
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 219, 26

Conread position: 135-512
Cow position: chr11:45632044-45631666 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 26

Conread position: 135-526
Cow position: chr11:52381149-52380758 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 25

Conread position: 136-348
Cow position: chr11:65159725-65159521 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 23

Conread position: 137-482
Cow position: chr11:45898333-45897981 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 24

Conread position: 141-532
Cow position: chr11:70836644-70836256 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 253
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 120, 77

Conread position: 142-396
Cow position: chr11:58155816-58156068 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 145, 18

Conread position: 143-554
Cow position: chr11:34032466-34032057 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 17

Conread position: 143-560
Cow position: chr11:5790186-5789752 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 282
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 108, 187

Conread position: 144-368
Cow position: chr11:62045129-62045344 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 155, 16

Conread position: 145-348
Cow position: chr11:38193883-38194082 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 162
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 15, 0

Conread position: 145-350
Cow position: chr11:2788111-2788312 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 129, 23

Conread position: 145-367
Cow position: chr11:1362749-1362529 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 144, 23

Conread position: 145-371
Cow position: chr11:19508028-19508246 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 145-372
Cow position: chr11:51687994-51687772 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 142, 23

Conread position: 145-375
Cow position: chr11:32377919-32378143 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 144, 15

Conread position: 145-382
Cow position: chr11:48650526-48650756 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 168, 16

Conread position: 145-394
Cow position: chr11:10388865-10388623 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 144, 25

Conread position: 145-408
Cow position: chr11:1668406-1668667 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 165, 35

Conread position: 145-415
Cow position: chr11:57946210-57945943 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 182
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 142, 39

Conread position: 145-418
Cow position: chr11:80530102-80530373 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 142, 16

Conread position: 145-460
Cow position: chr11:81137953-81138257 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 245, 102

Conread position: 145-465
Cow position: chr11:55761611-55761920 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 216, 25

Conread position: 145-465
Cow position: chr11:63482694-63482378 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 227
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 147, 15

Conread position: 145-469
Cow position: chr11:6234147-6233824 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 228
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 156, 23

Conread position: 145-475
Cow position: chr11:24937394-24937727 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 25

Conread position: 145-501
Cow position: chr11:34830048-34829697 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 64, 15

Conread position: 145-502
Cow position: chr11:62663501-62663145 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 15

Conread position: 145-508
Cow position: chr11:11232723-11232360 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 16

Conread position: 145-510
Cow position: chr11:83066227-83066583 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 15

Conread position: 145-512
Cow position: chr11:67600499-67600884 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 269
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 112, 15

Conread position: 145-513
Cow position: chr11:83043629-83043262 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 23

Conread position: 145-521
Cow position: chr11:10992011-10992375 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 263
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 122, 33

Conread position: 145-531
Cow position: chr11:53773404-53773798 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 273
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 128, 15

Conread position: 145-542
Cow position: chr11:20761577-20761972 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 16

Conread position: 145-622
Cow position: chr11:10620594-10620110 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 15

Conread position: 145-660
Cow position: chr11:33341414-33340901 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 15

Conread position: 146-512
Cow position: chr11:11125395-11125762 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 14

Conread position: 148-334
Cow position: chr11:18484428-18484252 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 148-349
Cow position: chr11:73474039-73473841 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 165, 12

Conread position: 148-367
Cow position: chr11:70459309-70459508 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 148-396
Cow position: chr11:59370749-59370992 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 222, 20

Conread position: 148-512
Cow position: chr11:24601704-24602070 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 12

Conread position: 149-510
Cow position: chr11:34120929-34121296 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 276

Conread position: 149-513
Cow position: chr11:27746653-27747024 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 24

Conread position: 150-510
Cow position: chr11:22499614-22499269 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 143, 11

Conread position: 155-611
Cow position: chr11:30596734-30597206 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 321
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 141, 67

Conread position: 156-372
Cow position: chr11:58103036-58102825 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 136, 155

Conread position: 162-367
Cow position: chr11:63516568-63516773 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 163-364
Cow position: chr11:18341293-18341096 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 161
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 195, 127

Conread position: 167-377
Cow position: chr11:77682921-77683124 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 135, 37

Conread position: 171-372
Cow position: chr11:62808895-62808697 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 121, 70

Conread position: 171-524
Cow position: chr11:18707060-18706715 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 97

Conread position: 173-321
Cow position: chr11:26277335-26277190 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 88, 0

Conread position: 173-401
Cow position: chr11:41438469-41438235 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 117, 78

Conread position: 173-461
Cow position: chr11:45889710-45890007 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 195
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 124, 7

Conread position: 173-474
Cow position: chr11:64904751-64905059 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 114, 61

Conread position: 173-519
Cow position: chr11:47544883-47545239 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 267

Conread position: 173-524
Cow position: chr11:20238428-20238790 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 85

Conread position: 173-531
Cow position: chr11:45646838-45646476 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 74

Conread position: 173-618
Cow position: chr11:33310727-33311187 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 55

Conread position: 174-367
Cow position: chr11:8105539-8105727 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 118, 56

Conread position: 174-367
Cow position: chr11:34121514-34121710 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 79, 141

Conread position: 174-367
Cow position: chr11:62155383-62155574 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 158
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 112, 49

Conread position: 174-370
Cow position: chr11:12555664-12555461 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 114, 76

Conread position: 174-371
Cow position: chr11:84924342-84924144 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 51, 167

Conread position: 174-372
Cow position: chr11:81281701-81281899 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 174-376
Cow position: chr11:15016802-15016997 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 174-377
Cow position: chr11:37347231-37347436 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 122, 33

Conread position: 174-377
Cow position: chr11:63520529-63520729 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 89, 0

Conread position: 174-405
Cow position: chr11:25165200-25165420 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 174-407
Cow position: chr11:62016514-62016285 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 173, 65

Conread position: 174-413
Cow position: chr11:77207805-77208044 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 195, 73

Conread position: 174-427
Cow position: chr11:48932827-48932571 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 195, 69

Conread position: 174-433
Cow position: chr11:6400316-6400052 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 113, 94

Conread position: 174-460
Cow position: chr11:8148130-8147852 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 188, 19

Conread position: 174-460
Cow position: chr11:31525621-31525925 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 122, 32

Conread position: 174-460
Cow position: chr11:42003200-42002901 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 212
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 112, 65

Conread position: 174-460
Cow position: chr11:46580123-46580404 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 190, 43

Conread position: 174-460
Cow position: chr11:56728703-56728996 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 201, 116

Conread position: 174-465
Cow position: chr11:30912236-30911952 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 140

Conread position: 174-465
Cow position: chr11:36799542-36799255 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 118, 67

Conread position: 174-469
Cow position: chr11:45872562-45872255 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 224
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 117, 67

Conread position: 174-474
Cow position: chr11:9221969-9221671 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 194, 68

Conread position: 174-475
Cow position: chr11:81162675-81162371 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 224
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 196, 60

Conread position: 174-510
Cow position: chr11:16342485-16342131 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 77

Conread position: 174-510
Cow position: chr11:36647117-36647441 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 236
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 205, 173

Conread position: 174-512
Cow position: chr11:17227883-17227545 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 170, 54

Conread position: 174-512
Cow position: chr11:21844379-21844039 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 172

Conread position: 174-512
Cow position: chr11:47899033-47899368 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 195

Conread position: 174-513
Cow position: chr11:2917823-2917486 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 51

Conread position: 174-522
Cow position: chr11:17036796-17036418 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 275

Conread position: 174-531
Cow position: chr11:66188565-66188202 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 21, 59

Conread position: 174-533
Cow position: chr11:35154071-35153704 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 267

Conread position: 174-535
Cow position: chr11:55333665-55334036 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 260

Conread position: 175-345
Cow position: chr11:10127857-10127699 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 175-367
Cow position: chr11:53719702-53719890 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 82, 0

Conread position: 175-460
Cow position: chr11:57725071-57724778 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 116, 171

Conread position: 175-465
Cow position: chr11:30764237-30764542 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 216
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 114, 262

Conread position: 175-512
Cow position: chr11:65157650-65157308 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 240
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 141, 51

Conread position: 175-533
Cow position: chr11:35348000-35347634 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 239
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 112, 256

Conread position: 180-315
Cow position: chr11:44575461-44575597 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 76, 86

Conread position: 180-512
Cow position: chr11:48544205-48544540 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 142, 50

Conread position: 180-588
Cow position: chr11:36659050-36658649 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 281
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 182, 58

Conread position: 181-340
Cow position: chr11:49396288-49396128 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 181-348
Cow position: chr11:52466583-52466415 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 5, 16

Conread position: 181-351
Cow position: chr11:30455398-30455230 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 37

Conread position: 182-376
Cow position: chr11:7631322-7631517 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 133
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 182-376
Cow position: chr11:35668954-35668758 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 131, 0

Conread position: 182-383
Cow position: chr11:8714245-8714447 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 138
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 183-371
Cow position: chr11:30866908-30867091 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 19, 0

Conread position: 183-524
Cow position: chr11:11469868-11469539 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 185-390
Cow position: chr11:39440541-39440338 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 102, 11

Conread position: 185-435
Cow position: chr11:6364416-6364166 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 167
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 102, 11

Conread position: 186-513
Cow position: chr11:29960072-29960396 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 49

Conread position: 189-366
Cow position: chr11:61246685-61246513 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 98, 6

Conread position: 190-344
Cow position: chr11:19755429-19755585 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 101, 141

Conread position: 190-363
Cow position: chr11:6329018-6329192 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 108, 51

Conread position: 190-448
Cow position: chr11:18591661-18591399 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 35

Conread position: 190-469
Cow position: chr11:42519514-42519789 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 123, 57

Conread position: 190-474
Cow position: chr11:83323346-83323624 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 175, 36

Conread position: 190-509
Cow position: chr11:4663266-4662952 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 221
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 178, 53

Conread position: 190-510
Cow position: chr11:21728495-21728183 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 146, 40

Conread position: 190-548
Cow position: chr11:66425118-66424744 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 65

Conread position: 190-622
Cow position: chr11:83230615-83230188 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 46

Conread position: 192-372
Cow position: chr11:21830577-21830401 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 162, 5

Conread position: 192-548
Cow position: chr11:36238556-36238908 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 33

Conread position: 193-373
Cow position: chr11:14308413-14308589 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 95, 103

Conread position: 193-432
Cow position: chr11:83767988-83768229 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 94, 208

Conread position: 193-469
Cow position: chr11:33348409-33348131 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 37

Conread position: 193-535
Cow position: chr11:32436104-32436455 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 250
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 93, 129

Conread position: 194-512
Cow position: chr11:19501001-19500694 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 34

Conread position: 196-370
Cow position: chr11:24719418-24719591 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 91, 164

Conread position: 196-510
Cow position: chr11:35723755-35724064 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 215
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 91, 109

Conread position: 197-345
Cow position: chr11:27722141-27722288 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 197-348
Cow position: chr11:68828152-68828304 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 197-368
Cow position: chr11:28691977-28691811 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 14, 6

Conread position: 197-512
Cow position: chr11:55052655-55052971 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 125

Conread position: 197-513
Cow position: chr11:17660874-17661184 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 30

Conread position: 197-526
Cow position: chr11:2907743-2907415 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 227

Conread position: 197-532
Cow position: chr11:14470146-14470485 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 231
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 86, 158

Conread position: 198-377
Cow position: chr11:40860936-40860752 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 198-524
Cow position: chr11:39462398-39462735 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 224
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 69, 234

Conread position: 198-535
Cow position: chr11:15772942-15772596 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 245
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 93, 210

Conread position: 199-347
Cow position: chr11:38071133-38071285 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 199-395
Cow position: chr11:5526793-5526593 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 88, 187

Conread position: 199-547
Cow position: chr11:3282833-3283158 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 238
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 295, 44

Conread position: 200-518
Cow position: chr11:65762814-65762486 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 45

Conread position: 201-348
Cow position: chr11:53644617-53644468 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 201-474
Cow position: chr11:42044207-42043935 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 95, 107

Conread position: 201-510
Cow position: chr11:11557952-11558269 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 46

Conread position: 201-542
Cow position: chr11:34145133-34144799 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 236
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 177, 90

Conread position: 203-372
Cow position: chr11:36301296-36301124 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 6, 0

Conread position: 204-469
Cow position: chr11:38874616-38874346 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 88, 38

Conread position: 204-475
Cow position: chr11:67550578-67550316 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 174, 26

Conread position: 204-600
Cow position: chr11:70114259-70114660 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 272
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 87, 47

Conread position: 206-367
Cow position: chr11:7458495-7458337 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 80, 10

Conread position: 206-368
Cow position: chr11:18372866-18373025 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 206-383
Cow position: chr11:7574111-7574289 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 78

Conread position: 206-474
Cow position: chr11:65607905-65607628 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 0

Conread position: 206-500
Cow position: chr11:69810692-69810991 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 129, 211

Conread position: 206-515
Cow position: chr11:5485796-5486114 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 81, 33

Conread position: 207-491
Cow position: chr11:36286488-36286772 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 85, 50

Conread position: 208-532
Cow position: chr11:47639242-47638908 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 220
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 13, 72

Conread position: 208-591
Cow position: chr11:61958959-61958565 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 231

Conread position: 209-347
Cow position: chr11:16843214-16843077 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 114
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 88, 0

Conread position: 209-418
Cow position: chr11:36672259-36672036 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 210-466
Cow position: chr11:63434268-63434005 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 13, 219

Conread position: 210-530
Cow position: chr11:71493068-71492744 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 142

Conread position: 210-634
Cow position: chr11:72375896-72375472 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 293
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 159, 222

Conread position: 211-530
Cow position: chr11:9463622-9463953 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 227
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 80, 223

Conread position: 213-522
Cow position: chr11:38334310-38334630 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 216
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 131

Conread position: 219-537
Cow position: chr11:6245115-6245438 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 221
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 28, 211

Conread position: 221-471
Cow position: chr11:25331936-25331688 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 65, 22

Conread position: 224-383
Cow position: chr11:79960985-79960823 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 224-526
Cow position: chr11:64077696-64077392 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 206
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 33

Conread position: 224-533
Cow position: chr11:2874192-2874519 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 220
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 63, 217

Conread position: 227-460
Cow position: chr11:20684770-20684525 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 59, 207

Conread position: 230-532
Cow position: chr11:68841014-68841325 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 39

Conread position: 230-539
Cow position: chr11:66572691-66572375 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 218
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 20

Conread position: 231-376
Cow position: chr11:12896813-12896950 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 231-451
Cow position: chr11:57171016-57170792 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 123, 27

Conread position: 231-524
Cow position: chr11:48496771-48496481 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 216
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 139, 32

Conread position: 231-549
Cow position: chr11:71501318-71500998 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 226
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 25

Conread position: 231-621
Cow position: chr11:34646402-34646797 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 87

Conread position: 234-471
Cow position: chr11:7497831-7497589 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 52, 17

Conread position: 235-517
Cow position: chr11:1157459-1157746 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 195
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 55, 201

Conread position: 236-372
Cow position: chr11:47850842-47850981 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 120
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 97, 0

Conread position: 237-471
Cow position: chr11:35791992-35791764 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 237-540
Cow position: chr11:30954815-30955124 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 189

Conread position: 239-519
Cow position: chr11:42296799-42296513 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 130, 195

Conread position: 239-622
Cow position: chr11:26845762-26845387 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 23

Conread position: 240-498
Cow position: chr11:5286-5549 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 16, 36

Conread position: 240-512
Cow position: chr11:26144279-26143996 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 108

Conread position: 241-344
Cow position: chr11:47109790-47109893 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 241-362
Cow position: chr11:38670503-38670625 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 241-383
Cow position: chr11:78543755-78543898 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 241-458
Cow position: chr11:36058625-36058841 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 129, 49

Conread position: 241-511
Cow position: chr11:70086145-70086431 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 198

Conread position: 241-512
Cow position: chr11:9270907-9270629 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 58, 191

Conread position: 243-460
Cow position: chr11:77118534-77118746 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 14

Conread position: 245-500
Cow position: chr11:85294072-85294329 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 174
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 10

Conread position: 245-505
Cow position: chr11:28993904-28993647 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 123, 19

Conread position: 245-509
Cow position: chr11:30830791-30830518 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 193

Conread position: 246-474
Cow position: chr11:71008961-71009189 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 40, 180

Conread position: 247-417
Cow position: chr11:75918170-75918339 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 125, 21

Conread position: 248-618
Cow position: chr11:16907215-16906853 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 47

Conread position: 249-384
Cow position: chr11:53511910-53512047 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 249-451
Cow position: chr11:67207568-67207767 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 114

Conread position: 250-382
Cow position: chr11:29266370-29266503 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 250-441
Cow position: chr11:85986341-85986144 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 120, 189

Conread position: 251-460
Cow position: chr11:70950713-70950917 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 39

Conread position: 251-511
Cow position: chr11:75874921-75874657 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 192
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 96, 109

Conread position: 252-505
Cow position: chr11:55494514-55494772 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 112, 11

Conread position: 253-523
Cow position: chr11:80556053-80556331 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 109, 141

Conread position: 253-525
Cow position: chr11:8545180-8544905 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 54

Conread position: 253-531
Cow position: chr11:76889881-76890164 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 193
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 39, 95

Conread position: 253-556
Cow position: chr11:40479022-40478714 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 178

Conread position: 254-526
Cow position: chr11:81135328-81135055 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 113, 17

Conread position: 255-512
Cow position: chr11:48295867-48296130 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 89, 65

Conread position: 257-433
Cow position: chr11:56125311-56125482 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 38, 65

Conread position: 258-442
Cow position: chr11:17493316-17493507 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 110, 79

Conread position: 258-452
Cow position: chr11:56349178-56348984 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 29, 136

Conread position: 258-474
Cow position: chr11:80756946-80756720 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 174

Conread position: 258-511
Cow position: chr11:56187457-56187705 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 102, 70

Conread position: 258-533
Cow position: chr11:11646907-11647204 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 215
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 107, 142

Conread position: 259-460
Cow position: chr11:66289398-66289598 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 27, 105

Conread position: 260-524
Cow position: chr11:45434926-45435193 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 84, 78

Conread position: 261-512
Cow position: chr11:71390723-71390466 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 108, 178

Conread position: 262-547
Cow position: chr11:6202288-6202573 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 193
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 106, 163

Conread position: 264-525
Cow position: chr11:44222734-44222997 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 105, 57

Conread position: 265-410
Cow position: chr11:70741131-70740978 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 125
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 97, 0

Conread position: 265-518
Cow position: chr11:35213316-35213062 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 24

Conread position: 265-531
Cow position: chr11:63435362-63435639 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 104, 164

Conread position: 265-537
Cow position: chr11:5201805-5201528 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 40, 162

Conread position: 266-557
Cow position: chr11:70278263-70277970 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 200
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 23, 129

Conread position: 268-509
Cow position: chr11:32254371-32254122 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 44

Conread position: 268-513
Cow position: chr11:48306496-48306246 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 100, 36

Conread position: 268-529
Cow position: chr11:18851766-18852024 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 228, 81

Conread position: 268-621
Cow position: chr11:69075756-69076114 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 161

Conread position: 269-510
Cow position: chr11:70250774-70251017 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 97, 53

Conread position: 270-537
Cow position: chr11:71806294-71806028 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 120, 104

Conread position: 271-511
Cow position: chr11:86720561-86720322 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 90, 47

Conread position: 274-512
Cow position: chr11:49057256-49057491 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 161
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 142, 100

Conread position: 276-531
Cow position: chr11:63999234-63998973 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 92, 149

Conread position: 279-515
Cow position: chr11:65767056-65767302 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 91, 150

Conread position: 281-516
Cow position: chr11:69977838-69978074 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 87, 45

Conread position: 281-522
Cow position: chr11:67615382-67615137 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 86, 30

Conread position: 281-543
Cow position: chr11:47772531-47772260 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 81, 37

Conread position: 284-530
Cow position: chr11:261399-261150 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 82, 147

Conread position: 285-509
Cow position: chr11:62788993-62789226 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 78, 153

Conread position: 290-614
Cow position: chr11:64868145-64867819 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 232
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 55, 59

Conread position: 294-511
Cow position: chr11:63035302-63035074 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 125, 26

Conread position: 294-556
Cow position: chr11:41293945-41293680 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 30, 136

Conread position: 297-504
Cow position: chr11:83032560-83032772 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 70, 25

Conread position: 297-505
Cow position: chr11:49873011-49872795 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 116

Conread position: 297-510
Cow position: chr11:6194082-6194303 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 145

Conread position: 298-530
Cow position: chr11:8461893-8462121 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 195, 63

Conread position: 299-622
Cow position: chr11:36635159-36634816 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 233
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 145

Conread position: 300-497
Cow position: chr11:84490610-84490415 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 62, 120

Conread position: 300-524
Cow position: chr11:26275078-26274851 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 97

Conread position: 306-526
Cow position: chr11:39060715-39060489 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 32, 122

Conread position: 314-611
Cow position: chr11:14466595-14466285 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 216
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 132

Conread position: 315-524
Cow position: chr11:30493893-30494105 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 55, 114

Conread position: 317-512
Cow position: chr11:32691067-32690871 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 54, 17

Conread position: 330-524
Cow position: chr11:17676461-17676261 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 95

Conread position: 333-537
Cow position: chr11:8437777-8437570 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 43, 92

Conread position: 340-530
Cow position: chr11:28168505-28168305 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 91

Conread position: 341-618
Cow position: chr11:42453000-42452728 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 136, 31

Conread position: 353-524
Cow position: chr11:46922944-46922773 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 137, 67

Conread position: 362-618
Cow position: chr11:10363434-10363170 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 134, 12

Conread position: 364-513
Cow position: chr11:21885785-21885933 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 64

Conread position: 364-528
Cow position: chr11:15017011-15017172 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 137, 17

Conread position: 365-526
Cow position: chr11:42160101-42159946 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 56

Conread position: 370-513
Cow position: chr11:897632-897775 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 125, 57

Conread position: 371-542
Cow position: chr11:48248256-48248088 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 124, 49

Conread position: 382-607
Cow position: chr11:79019088-79018847 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 113, 38

Conread position: 400-634
Cow position: chr11:62749480-62749255 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 30

Conread position: 401-636
Cow position: chr11:17195841-17195619 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 176, 31

Conread position: 432-610
Cow position: chr11:45437297-45437478 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 66, 118

Show alignments to all cow chromosomes.