Cow genome map

Conread name: Mixn-0015i14

Conread position: 1-394
Cow position: chr12:38010490-38010106 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 19

Conread position: 2-348
Cow position: chr12:1885523-1885180 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 18

Conread position: 2-348
Cow position: chr12:22571825-22572172 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 240
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 141, 18

Conread position: 2-390
Cow position: chr12:42625807-42625417 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 18

Conread position: 2-390
Cow position: chr12:46124527-46124916 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 18

Conread position: 2-406
Cow position: chr12:35213652-35214057 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 18

Conread position: 2-415
Cow position: chr12:5813288-5813702 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 18

Conread position: 2-415
Cow position: chr12:12928092-12927691 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 273
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 285, 18

Conread position: 2-415
Cow position: chr12:21419712-21419296 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 18

Conread position: 2-415
Cow position: chr12:41710953-41710539 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 18

Conread position: 2-435
Cow position: chr12:14141088-14141519 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 286
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 141, 18

Conread position: 3-327
Cow position: chr12:4593661-4593990 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 17

Conread position: 3-348
Cow position: chr12:30011154-30010812 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 246
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 140, 17

Conread position: 3-348
Cow position: chr12:30016261-30015919 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 246
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 140, 17

Conread position: 3-384
Cow position: chr12:25259935-25259561 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 17

Conread position: 3-390
Cow position: chr12:31260617-31260229 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 17

Conread position: 3-415
Cow position: chr12:7873191-7873604 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 274
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 140, 17

Conread position: 3-428
Cow position: chr12:3578849-3579282 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 140

Conread position: 3-440
Cow position: chr12:37562819-37563259 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 287
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 138, 17

Conread position: 3-511
Cow position: chr12:17031172-17031690 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 17

Conread position: 3-526
Cow position: chr12:15089057-15089608 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 17

Conread position: 3-545
Cow position: chr12:8076127-8075585 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 17

Conread position: 4-345
Cow position: chr12:18011004-18011340 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 236
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 129, 16

Conread position: 5-367
Cow position: chr12:17472647-17472300 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 25

Conread position: 5-372
Cow position: chr12:19872008-19872358 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 120

Conread position: 5-393
Cow position: chr12:24440380-24440770 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 26

Conread position: 5-505
Cow position: chr12:30170230-30170740 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 15

Conread position: 5-511
Cow position: chr12:7977621-7978112 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 15

Conread position: 5-513
Cow position: chr12:7885081-7884601 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 15

Conread position: 5-513
Cow position: chr12:9142962-9143467 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 13

Conread position: 5-522
Cow position: chr12:18123256-18123758 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 15

Conread position: 5-535
Cow position: chr12:4008712-4008183 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 15

Conread position: 5-570
Cow position: chr12:29969147-29969721 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 15

Conread position: 5-635
Cow position: chr12:35368198-35368841 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 19

Conread position: 6-372
Cow position: chr12:5800601-5800964 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 24

Conread position: 7-513
Cow position: chr12:31429988-31429493 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 156

Conread position: 7-620
Cow position: chr12:11835816-11836421 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 133

Conread position: 8-363
Cow position: chr12:34385929-34385591 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 248
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 201, 12

Conread position: 8-367
Cow position: chr12:22047056-22047398 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 117

Conread position: 8-372
Cow position: chr12:17007770-17008134 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 12

Conread position: 8-465
Cow position: chr12:5658527-5658046 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 12

Conread position: 8-472
Cow position: chr12:18550468-18550919 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 22

Conread position: 8-481
Cow position: chr12:17079832-17080307 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 12

Conread position: 8-496
Cow position: chr12:8869321-8868820 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 44

Conread position: 8-496
Cow position: chr12:41083623-41084118 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 15

Conread position: 8-502
Cow position: chr12:19869042-19869529 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 108

Conread position: 8-512
Cow position: chr12:19691667-19691158 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 12

Conread position: 8-522
Cow position: chr12:11056464-11056963 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 15

Conread position: 8-535
Cow position: chr12:19865813-19866344 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 12

Conread position: 8-622
Cow position: chr12:6719895-6720508 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 15

Conread position: 8-657
Cow position: chr12:21045484-21044835 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 12

Conread position: 9-370
Cow position: chr12:45555846-45555491 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 10-510
Cow position: chr12:7310980-7311458 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 163

Conread position: 11-451
Cow position: chr12:16359449-16359881 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 6

Conread position: 11-512
Cow position: chr12:1890014-1889499 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 338
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 127, 9

Conread position: 11-512
Cow position: chr12:42181564-42181050 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 6

Conread position: 11-559
Cow position: chr12:15530620-15531179 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 6

Conread position: 11-622
Cow position: chr12:7001030-7000423 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 9

Conread position: 12-326
Cow position: chr12:13965197-13964885 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 211
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 145, 32

Conread position: 12-367
Cow position: chr12:27563802-27563453 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 8

Conread position: 12-384
Cow position: chr12:541673-541302 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 249
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 129, 83

Conread position: 12-524
Cow position: chr12:37770446-37770959 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 11

Conread position: 12-548
Cow position: chr12:34474026-34473514 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 80

Conread position: 12-629
Cow position: chr12:1223755-1223153 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 391
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 141, 72

Conread position: 19-361
Cow position: chr12:21486177-21486505 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 92

Conread position: 19-361
Cow position: chr12:40158655-40158318 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 108

Conread position: 19-471
Cow position: chr12:15173400-15173860 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 326
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 115, 155

Conread position: 19-502
Cow position: chr12:6489392-6488924 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 144

Conread position: 19-511
Cow position: chr12:5632293-5631807 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 155

Conread position: 19-519
Cow position: chr12:29484306-29483802 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 26

Conread position: 19-535
Cow position: chr12:18421345-18420830 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 147

Conread position: 20-373
Cow position: chr12:47486115-47486452 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 237
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 125, 159

Conread position: 20-384
Cow position: chr12:35807266-35807623 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 258
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 123, 75

Conread position: 20-390
Cow position: chr12:22932981-22932610 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 86

Conread position: 23-366
Cow position: chr12:38041168-38040833 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 233
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 129, 69

Conread position: 24-383
Cow position: chr12:45802113-45801766 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 192, 127

Conread position: 25-367
Cow position: chr12:2669843-2670190 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 233
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 107, 122

Conread position: 25-435
Cow position: chr12:30143376-30143788 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 275
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 118, 164

Conread position: 25-512
Cow position: chr12:30605556-30605087 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 69

Conread position: 25-671
Cow position: chr12:31959479-31960108 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 67

Conread position: 26-345
Cow position: chr12:3880664-3880348 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 25

Conread position: 26-351
Cow position: chr12:180559-180233 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 220
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 121, 129

Conread position: 27-367
Cow position: chr12:7147269-7147611 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 236
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 111, 52

Conread position: 27-469
Cow position: chr12:19508980-19508524 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 143

Conread position: 27-531
Cow position: chr12:41159173-41159685 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 52

Conread position: 27-618
Cow position: chr12:39486022-39486585 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 61

Conread position: 28-330
Cow position: chr12:19420341-19420040 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 47

Conread position: 28-417
Cow position: chr12:4116102-4116474 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 284
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 115, 29

Conread position: 31-538
Cow position: chr12:31228180-31228677 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 53

Conread position: 32-460
Cow position: chr12:20326369-20326800 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 65

Conread position: 34-496
Cow position: chr12:45814668-45814200 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 141

Conread position: 34-623
Cow position: chr12:36013025-36012446 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 381
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 70, 144

Conread position: 37-448
Cow position: chr12:30596065-30596481 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 95

Conread position: 38-512
Cow position: chr12:31532813-31532325 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 326
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 108, 217

Conread position: 38-560
Cow position: chr12:30753326-30753847 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 114

Conread position: 39-425
Cow position: chr12:1245895-1246292 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 276
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 20, 33

Conread position: 39-474
Cow position: chr12:16543975-16543540 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 294
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 69, 40

Conread position: 44-448
Cow position: chr12:40910684-40910275 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 128

Conread position: 45-512
Cow position: chr12:30437858-30438316 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 130

Conread position: 46-522
Cow position: chr12:1774055-1773572 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 323
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 99, 119

Conread position: 47-513
Cow position: chr12:15429991-15429519 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 118

Conread position: 48-433
Cow position: chr12:3568560-3568943 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 260
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 321, 77

Conread position: 52-367
Cow position: chr12:6227017-6226723 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 224
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 240, 90

Conread position: 54-344
Cow position: chr12:5863195-5863469 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 82

Conread position: 54-348
Cow position: chr12:26871596-26871303 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 207
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 222, 89

Conread position: 54-457
Cow position: chr12:28011283-28010886 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 122

Conread position: 54-513
Cow position: chr12:17000878-17001338 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 115

Conread position: 58-356
Cow position: chr12:15938645-15938351 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 217
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 17, 113

Conread position: 59-373
Cow position: chr12:27039143-27038824 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 224
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 5, 73

Conread position: 60-348
Cow position: chr12:18055720-18055432 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 83, 129

Conread position: 61-522
Cow position: chr12:25560994-25561458 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 188

Conread position: 67-451
Cow position: chr12:31060350-31059966 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 17

Conread position: 71-510
Cow position: chr12:47803788-47804233 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 116

Conread position: 71-512
Cow position: chr12:17881505-17881940 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 119

Conread position: 71-539
Cow position: chr12:41580750-41581214 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 104

Conread position: 73-410
Cow position: chr12:6698413-6698754 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 242
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 59, 94

Conread position: 74-429
Cow position: chr12:26233011-26232660 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 236
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 73, 46

Conread position: 78-457
Cow position: chr12:6765656-6766029 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 252
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 69, 95

Conread position: 79-367
Cow position: chr12:18937030-18937328 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 80-372
Cow position: chr12:41979658-41979367 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 8, 86

Conread position: 83-511
Cow position: chr12:33323853-33323420 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 89

Conread position: 85-330
Cow position: chr12:9465813-9465565 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 58, 96

Conread position: 85-549
Cow position: chr12:18020499-18020973 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 81

Conread position: 86-504
Cow position: chr12:18577494-18577911 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 57

Conread position: 88-322
Cow position: chr12:12976536-12976296 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 64, 0

Conread position: 88-442
Cow position: chr12:18076186-18076529 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 237
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 55, 75

Conread position: 90-368
Cow position: chr12:9710553-9710282 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 77

Conread position: 91-509
Cow position: chr12:2812880-2813302 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 78

Conread position: 92-384
Cow position: chr12:1518644-1518346 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 194
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 12

Conread position: 96-354
Cow position: chr12:20377213-20377473 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 47, 69

Conread position: 96-466
Cow position: chr12:731277-730904 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 259
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 31, 51

Conread position: 102-375
Cow position: chr12:32399859-32400133 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 187
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 37, 64

Conread position: 103-367
Cow position: chr12:22261149-22260897 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 112

Conread position: 107-531
Cow position: chr12:42685282-42684847 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 204
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 152, 317

Conread position: 111-634
Cow position: chr12:34148678-34148168 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 54

Conread position: 114-353
Cow position: chr12:5134815-5135057 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 51

Conread position: 120-502
Cow position: chr12:44622039-44622417 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 37

Conread position: 120-510
Cow position: chr12:9229796-9229425 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 267
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 21, 41

Conread position: 125-528
Cow position: chr12:26782568-26782966 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 283
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 53

Conread position: 127-348
Cow position: chr12:21246837-21246614 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 71

Conread position: 127-459
Cow position: chr12:30728551-30728221 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 225
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 18, 170

Conread position: 129-526
Cow position: chr12:15358023-15358430 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 276
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 8, 32

Conread position: 131-474
Cow position: chr12:19664818-19664492 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 239
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 10, 31

Conread position: 132-382
Cow position: chr12:18769376-18769132 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 19, 7

Conread position: 132-512
Cow position: chr12:33457848-33458226 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 265
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 264, 29

Conread position: 132-524
Cow position: chr12:18518369-18518764 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 29

Conread position: 132-528
Cow position: chr12:6411028-6410639 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 7

Conread position: 134-354
Cow position: chr12:30036236-30036018 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 27

Conread position: 134-359
Cow position: chr12:30688038-30688260 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 6, 27

Conread position: 136-395
Cow position: chr12:34274162-34274421 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 110

Conread position: 136-512
Cow position: chr12:9914492-9914868 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 264
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 62, 24

Conread position: 143-512
Cow position: chr12:25805400-25805054 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 17

Conread position: 143-512
Cow position: chr12:30805565-30805937 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 28

Conread position: 144-466
Cow position: chr12:28582781-28582476 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 231
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 219, 16

Conread position: 145-335
Cow position: chr12:46635233-46635050 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 149, 28

Conread position: 145-343
Cow position: chr12:5899239-5899429 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 23

Conread position: 145-372
Cow position: chr12:40270374-40270161 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 142, 15

Conread position: 145-377
Cow position: chr12:25455826-25456056 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 145, 23

Conread position: 145-448
Cow position: chr12:6164317-6164008 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 220, 10

Conread position: 145-469
Cow position: chr12:3076911-3076592 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 233
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 146, 23

Conread position: 145-475
Cow position: chr12:16605934-16605632 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 32, 0

Conread position: 145-484
Cow position: chr12:3055848-3056182 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 247
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 225, 16

Conread position: 145-503
Cow position: chr12:8943508-8943154 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 14

Conread position: 145-504
Cow position: chr12:26223273-26222920 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 65, 15

Conread position: 145-509
Cow position: chr12:20777217-20776850 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 258
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 88, 15

Conread position: 145-511
Cow position: chr12:5714341-5714704 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 264
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 224, 16

Conread position: 145-511
Cow position: chr12:30745425-30745794 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 13

Conread position: 145-511
Cow position: chr12:41473807-41474164 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 255
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 223, 23

Conread position: 145-511
Cow position: chr12:44518023-44517663 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 254
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 149, 12

Conread position: 145-528
Cow position: chr12:41091241-41091627 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 263
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 141, 15

Conread position: 145-553
Cow position: chr12:32714753-32715164 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 28

Conread position: 147-366
Cow position: chr12:22617267-22617049 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 149, 83

Conread position: 147-476
Cow position: chr12:22285386-22285080 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 239
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 222, 14

Conread position: 147-668
Cow position: chr12:5905771-5906295 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 13

Conread position: 148-365
Cow position: chr12:1284743-1284536 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 150, 12

Conread position: 148-373
Cow position: chr12:18417278-18417502 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 153, 13

Conread position: 148-451
Cow position: chr12:941347-941657 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 219
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 146, 20

Conread position: 148-451
Cow position: chr12:12178636-12178940 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 199, 12

Conread position: 149-467
Cow position: chr12:18388566-18388256 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 22

Conread position: 161-372
Cow position: chr12:30585440-30585651 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 36

Conread position: 165-365
Cow position: chr12:31530012-31530213 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 122, 0

Conread position: 171-377
Cow position: chr12:31841171-31841378 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 121, 201

Conread position: 171-523
Cow position: chr12:5635714-5635363 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 85

Conread position: 171-622
Cow position: chr12:45820623-45820167 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 32

Conread position: 173-382
Cow position: chr12:28559031-28559237 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 131, 0

Conread position: 173-439
Cow position: chr12:8710567-8710826 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 68

Conread position: 173-460
Cow position: chr12:42160821-42160533 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 33, 176

Conread position: 173-510
Cow position: chr12:42879442-42879769 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 244
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 197, 55

Conread position: 173-521
Cow position: chr12:30662214-30661864 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 250
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 18, 81

Conread position: 174-356
Cow position: chr12:4134401-4134586 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 32, 63

Conread position: 174-367
Cow position: chr12:3994686-3994882 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 117, 0

Conread position: 174-367
Cow position: chr12:12700038-12699839 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 38, 30

Conread position: 174-368
Cow position: chr12:24107801-24107618 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 174-376
Cow position: chr12:17702496-17702293 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 162
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 114, 127

Conread position: 174-390
Cow position: chr12:28804730-28804945 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 180, 116

Conread position: 174-417
Cow position: chr12:29411752-29411504 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 188
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 195, 94

Conread position: 174-432
Cow position: chr12:44846130-44846385 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 184, 54

Conread position: 174-460
Cow position: chr12:11109506-11109780 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 114, 67

Conread position: 174-465
Cow position: chr12:37993989-37993701 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 134

Conread position: 174-501
Cow position: chr12:30590513-30590835 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 195, 116

Conread position: 174-502
Cow position: chr12:35771295-35770952 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 237
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 130, 269

Conread position: 174-505
Cow position: chr12:32169273-32169612 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 166

Conread position: 174-512
Cow position: chr12:4866551-4866896 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 234
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 127, 73

Conread position: 174-513
Cow position: chr12:25177857-25177518 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 195

Conread position: 174-531
Cow position: chr12:43942217-43942567 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 249
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 194, 77

Conread position: 174-535
Cow position: chr12:37733040-37732680 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 248
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 208, 32

Conread position: 174-620
Cow position: chr12:25320660-25321104 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 89

Conread position: 174-635
Cow position: chr12:22881788-22882254 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 316
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 94, 19

Conread position: 175-392
Cow position: chr12:29162073-29161863 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 116, 70

Conread position: 175-399
Cow position: chr12:32391583-32391807 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 79, 90

Conread position: 175-445
Cow position: chr12:3510301-3510572 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 197

Conread position: 175-510
Cow position: chr12:42167383-42167707 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 98

Conread position: 175-619
Cow position: chr12:18766243-18765788 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 87

Conread position: 176-383
Cow position: chr12:4182957-4182748 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 56, 0

Conread position: 178-367
Cow position: chr12:28650693-28650881 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 109, 93

Conread position: 179-496
Cow position: chr12:24024050-24023740 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 209
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 5, 26

Conread position: 181-430
Cow position: chr12:35780183-35779926 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 181, 0

Conread position: 183-615
Cow position: chr12:6275358-6274922 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 281
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 104, 221

Conread position: 187-513
Cow position: chr12:24211166-24211484 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 225
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 174, 103

Conread position: 190-499
Cow position: chr12:27563084-27562776 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 216
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 105, 52

Conread position: 190-512
Cow position: chr12:28213271-28213586 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 176, 51

Conread position: 192-615
Cow position: chr12:29770818-29770399 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 44

Conread position: 193-511
Cow position: chr12:5940099-5940419 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 185

Conread position: 194-345
Cow position: chr12:42412463-42412310 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 101, 75

Conread position: 196-354
Cow position: chr12:9622678-9622839 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 197-392
Cow position: chr12:4809065-4809263 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 158
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 170, 105

Conread position: 197-442
Cow position: chr12:26317226-26317473 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 197
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 167, 23

Conread position: 197-469
Cow position: chr12:28471399-28471682 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 31

Conread position: 199-356
Cow position: chr12:24180659-24180811 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 84, 49

Conread position: 199-432
Cow position: chr12:30476239-30476481 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 93, 235

Conread position: 199-496
Cow position: chr12:35377961-35378263 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 155, 93

Conread position: 199-509
Cow position: chr12:23797865-23798173 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 42, 91

Conread position: 199-612
Cow position: chr12:27037686-27037266 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 10

Conread position: 200-343
Cow position: chr12:20071822-20071673 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 200-467
Cow position: chr12:13156436-13156701 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 8, 144

Conread position: 200-512
Cow position: chr12:25917509-25917199 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 230
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 21, 121

Conread position: 201-528
Cow position: chr12:5459027-5459344 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 223
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 90, 40

Conread position: 205-535
Cow position: chr12:24662883-24663215 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 46

Conread position: 206-456
Cow position: chr12:4162602-4162341 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 183
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 86, 113

Conread position: 206-533
Cow position: chr12:29899668-29899325 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 225
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 81, 185

Conread position: 206-618
Cow position: chr12:38454687-38455097 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 298
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 158, 22

Conread position: 207-376
Cow position: chr12:31369893-31370064 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 207-413
Cow position: chr12:38512072-38511863 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 83, 44

Conread position: 208-388
Cow position: chr12:25820662-25820482 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 91, 48

Conread position: 208-465
Cow position: chr12:18964158-18963897 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 146, 28

Conread position: 208-474
Cow position: chr12:3906239-3906513 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 86, 226

Conread position: 209-376
Cow position: chr12:27495778-27495946 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 92, 9

Conread position: 210-450
Cow position: chr12:15763137-15762895 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 31

Conread position: 210-502
Cow position: chr12:30210252-30210552 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 7

Conread position: 211-343
Cow position: chr12:16310203-16310338 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 212-407
Cow position: chr12:18021368-18021567 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 80, 45

Conread position: 212-533
Cow position: chr12:4596224-4596564 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 237
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 74, 213

Conread position: 214-522
Cow position: chr12:33129041-33129344 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 114

Conread position: 219-343
Cow position: chr12:19243903-19243777 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 94

Conread position: 219-382
Cow position: chr12:38484621-38484451 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 222-348
Cow position: chr12:42477534-42477661 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 222-528
Cow position: chr12:33851140-33851450 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 215
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 145, 104

Conread position: 224-383
Cow position: chr12:37088713-37088872 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 7

Conread position: 224-409
Cow position: chr12:42421438-42421255 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 63, 140

Conread position: 232-501
Cow position: chr12:30194500-30194769 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 179
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 24

Conread position: 232-513
Cow position: chr12:36544858-36544562 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 68

Conread position: 235-388
Cow position: chr12:38692389-38692236 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 135

Conread position: 238-350
Cow position: chr12:32334211-32334098 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 241-367
Cow position: chr12:29694247-29694120 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 58, 27

Conread position: 241-390
Cow position: chr12:37536689-37536540 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 109
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 55, 121

Conread position: 241-527
Cow position: chr12:4768726-4769018 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 198
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 178

Conread position: 242-500
Cow position: chr12:12300730-12300986 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 110, 29

Conread position: 243-427
Cow position: chr12:13066318-13066505 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 136

Conread position: 243-522
Cow position: chr12:7299666-7299369 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 194

Conread position: 247-510
Cow position: chr12:6242372-6242104 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 182
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 151

Conread position: 250-499
Cow position: chr12:38774431-38774177 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 174
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 44, 183

Conread position: 251-428
Cow position: chr12:29921973-29921789 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 48

Conread position: 253-524
Cow position: chr12:6485395-6485121 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 201
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 88, 67

Conread position: 255-383
Cow position: chr12:38678912-38679036 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 260-561
Cow position: chr12:19507451-19507763 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 224
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 107, 40

Conread position: 263-513
Cow position: chr12:15122142-15122406 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 175

Conread position: 263-531
Cow position: chr12:15050798-15050527 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 109

Conread position: 266-615
Cow position: chr12:44919859-44920211 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 244
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 103, 156

Conread position: 267-465
Cow position: chr12:20636333-20636121 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 24, 169

Conread position: 278-526
Cow position: chr12:36790974-36790719 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 69

Conread position: 279-511
Cow position: chr12:41216046-41215810 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 153

Conread position: 280-522
Cow position: chr12:37170104-37169856 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 68

Conread position: 283-510
Cow position: chr12:24032343-24032572 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 78, 52

Conread position: 284-528
Cow position: chr12:19258122-19258371 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 77, 146

Conread position: 285-509
Cow position: chr12:46120986-46120756 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 84, 146

Conread position: 292-513
Cow position: chr12:24116513-24116282 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 16, 109

Conread position: 292-541
Cow position: chr12:7110051-7110303 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 141

Conread position: 297-524
Cow position: chr12:9767018-9766786 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 26

Conread position: 300-531
Cow position: chr12:16670124-16670364 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 70, 138

Conread position: 301-513
Cow position: chr12:17269659-17269882 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 63, 129

Conread position: 301-540
Cow position: chr12:38184457-38184697 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 95

Conread position: 309-502
Cow position: chr12:3092705-3092512 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 56, 111

Conread position: 317-513
Cow position: chr12:19261074-19261275 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 33, 121

Conread position: 320-513
Cow position: chr12:23644919-23644723 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 25

Conread position: 333-510
Cow position: chr12:19274494-19274323 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 162, 37

Conread position: 341-522
Cow position: chr12:27357299-27357476 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 154, 25

Conread position: 351-522
Cow position: chr12:26777270-26777102 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 142, 81

Conread position: 357-524
Cow position: chr12:5839729-5839564 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 115, 12

Conread position: 363-500
Cow position: chr12:15641178-15641040 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 58

Conread position: 363-637
Cow position: chr12:33319735-33319463 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 214, 15

Conread position: 370-527
Cow position: chr12:15260701-15260855 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 125, 57

Conread position: 387-524
Cow position: chr12:14986704-14986839 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 388-615
Cow position: chr12:27572284-27572056 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 107, 32

Conread position: 394-622
Cow position: chr12:23696198-23695977 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 104, 26

Conread position: 462-621
Cow position: chr12:17712787-17712622 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 36, 0

Show alignments to all cow chromosomes.