Cow genome map

Conread name: Mixn-0015i14

Conread position: 1-348
Cow position: chr17:36499935-36499591 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 235
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 151, 19

Conread position: 1-544
Cow position: chr17:41394066-41393516 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 355
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 151, 22

Conread position: 2-332
Cow position: chr17:3386941-3387258 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 247
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 141, 18

Conread position: 2-348
Cow position: chr17:2265883-2266230 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 18

Conread position: 2-348
Cow position: chr17:17493985-17494332 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 241
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 141, 18

Conread position: 2-367
Cow position: chr17:41400325-41399966 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 150, 21

Conread position: 2-415
Cow position: chr17:29824265-29823859 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 265
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 285, 18

Conread position: 2-415
Cow position: chr17:34235555-34235141 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 275
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 141, 18

Conread position: 2-437
Cow position: chr17:33058914-33058477 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 278
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 150, 18

Conread position: 2-539
Cow position: chr17:26230583-26231139 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 18

Conread position: 2-539
Cow position: chr17:32365930-32366482 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 18

Conread position: 3-354
Cow position: chr17:6858747-6858395 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 17

Conread position: 3-361
Cow position: chr17:45881551-45881902 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 221
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 138, 34

Conread position: 3-367
Cow position: chr17:11056732-11056365 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 17

Conread position: 3-368
Cow position: chr17:1708058-1707696 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 248
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 122, 17

Conread position: 3-383
Cow position: chr17:31232295-31231910 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 264
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 101, 17

Conread position: 3-429
Cow position: chr17:29276877-29277298 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 286
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 149, 17

Conread position: 3-432
Cow position: chr17:31138-31566 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 17

Conread position: 3-482
Cow position: chr17:1568524-1568047 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 17

Conread position: 3-499
Cow position: chr17:21495022-21495515 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 17

Conread position: 3-502
Cow position: chr17:24823910-24824390 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 17

Conread position: 3-511
Cow position: chr17:29083850-29084331 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 163

Conread position: 3-535
Cow position: chr17:13940675-13940144 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 17

Conread position: 4-533
Cow position: chr17:17221991-17222518 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 16

Conread position: 5-135
Cow position: chr17:38628911-38629041 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 13, 30

Conread position: 5-318
Cow position: chr17:21038928-21039235 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 15

Conread position: 5-367
Cow position: chr17:24549816-24550182 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 15

Conread position: 5-375
Cow position: chr17:15188425-15188065 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 15

Conread position: 5-423
Cow position: chr17:5695296-5694882 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 154

Conread position: 5-460
Cow position: chr17:21960031-21959583 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 11

Conread position: 5-496
Cow position: chr17:33934099-33933602 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 15

Conread position: 5-502
Cow position: chr17:11216232-11215747 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 31

Conread position: 5-505
Cow position: chr17:5000930-5000437 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 15

Conread position: 5-510
Cow position: chr17:22775037-22775532 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 341
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 42, 128

Conread position: 5-511
Cow position: chr17:20022870-20022357 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 15

Conread position: 5-511
Cow position: chr17:20780166-20780670 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 19

Conread position: 5-512
Cow position: chr17:3684010-3683515 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 15

Conread position: 5-512
Cow position: chr17:36331315-36330801 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 15

Conread position: 5-513
Cow position: chr17:26764664-26765182 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 15

Conread position: 5-518
Cow position: chr17:13922126-13922653 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 15

Conread position: 5-518
Cow position: chr17:20800463-20800975 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 15

Conread position: 5-531
Cow position: chr17:30664922-30665446 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 15

Conread position: 5-533
Cow position: chr17:32027815-32027273 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 19

Conread position: 5-536
Cow position: chr17:25188930-25189467 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 11

Conread position: 5-622
Cow position: chr17:24553652-24554261 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 15

Conread position: 5-663
Cow position: chr17:15300217-15299575 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 15

Conread position: 6-389
Cow position: chr17:34005589-34005209 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 259
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 146, 14

Conread position: 6-510
Cow position: chr17:20848183-20848679 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 81

Conread position: 8-348
Cow position: chr17:27667544-27667202 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 9

Conread position: 8-363
Cow position: chr17:20093473-20093134 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 135, 22

Conread position: 8-366
Cow position: chr17:14003480-14003823 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 10

Conread position: 8-367
Cow position: chr17:32651266-32651625 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 12

Conread position: 8-378
Cow position: chr17:27305815-27306175 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 13

Conread position: 8-437
Cow position: chr17:8673759-8674176 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 282
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 135, 12

Conread position: 8-441
Cow position: chr17:15334071-15333624 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 132

Conread position: 8-463
Cow position: chr17:18861068-18860613 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 22

Conread position: 8-464
Cow position: chr17:20233877-20234320 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 12

Conread position: 8-465
Cow position: chr17:30539599-30539156 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 12

Conread position: 8-475
Cow position: chr17:34595588-34596061 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 12

Conread position: 8-498
Cow position: chr17:29715536-29715061 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 10

Conread position: 8-512
Cow position: chr17:33289004-33288499 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 12

Conread position: 8-515
Cow position: chr17:24580632-24580134 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 122

Conread position: 8-520
Cow position: chr17:5767551-5768070 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 15

Conread position: 8-524
Cow position: chr17:32989143-32989646 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 12

Conread position: 8-524
Cow position: chr17:32993963-32993454 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 12

Conread position: 8-526
Cow position: chr17:43717659-43717164 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 149

Conread position: 8-531
Cow position: chr17:12289769-12289234 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 16

Conread position: 8-533
Cow position: chr17:25608856-25608343 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 12

Conread position: 8-537
Cow position: chr17:32138747-32138242 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 12

Conread position: 8-547
Cow position: chr17:4213407-4213933 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 16

Conread position: 9-372
Cow position: chr17:25590574-25590224 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 67

Conread position: 9-377
Cow position: chr17:25542161-25541804 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 11

Conread position: 9-558
Cow position: chr17:15103228-15102693 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 11

Conread position: 10-367
Cow position: chr17:3843146-3843485 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 7

Conread position: 10-441
Cow position: chr17:12059440-12059007 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 13

Conread position: 10-511
Cow position: chr17:24077054-24077558 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 156

Conread position: 11-367
Cow position: chr17:1654028-1653686 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 252
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 124, 6

Conread position: 11-367
Cow position: chr17:5246538-5246897 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 9

Conread position: 11-368
Cow position: chr17:30204312-30204665 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 252
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 135, 6

Conread position: 11-382
Cow position: chr17:32457927-32457548 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 6

Conread position: 11-399
Cow position: chr17:5042029-5041641 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 6

Conread position: 11-424
Cow position: chr17:8690799-8690371 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 55

Conread position: 11-433
Cow position: chr17:22563848-22564253 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 19

Conread position: 11-471
Cow position: chr17:28539695-28540144 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 323
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 84, 118

Conread position: 11-500
Cow position: chr17:13144029-13143561 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 482, 9

Conread position: 11-514
Cow position: chr17:41029605-41030097 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 9

Conread position: 11-522
Cow position: chr17:23101554-23101051 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 9

Conread position: 11-535
Cow position: chr17:9853639-9854156 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 9

Conread position: 11-669
Cow position: chr17:21336044-21335378 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 20

Conread position: 12-332
Cow position: chr17:16117778-16117452 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 107

Conread position: 12-348
Cow position: chr17:16399143-16398806 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 230
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 140, 8

Conread position: 12-418
Cow position: chr17:5380640-5381023 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 275
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 36, 81

Conread position: 12-434
Cow position: chr17:11102130-11101721 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 94

Conread position: 12-465
Cow position: chr17:923533-923989 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 159

Conread position: 19-345
Cow position: chr17:23337354-23337033 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 155

Conread position: 19-348
Cow position: chr17:6566139-6566452 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 84

Conread position: 19-512
Cow position: chr17:979474-979009 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 112

Conread position: 19-618
Cow position: chr17:40289340-40288740 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 144

Conread position: 20-348
Cow position: chr17:18777129-18776804 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 132, 178

Conread position: 20-348
Cow position: chr17:27791083-27790753 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 224
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 137, 178

Conread position: 20-418
Cow position: chr17:6123495-6123895 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 259
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 132, 178

Conread position: 20-621
Cow position: chr17:17061011-17060411 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 84

Conread position: 21-365
Cow position: chr17:44561411-44561077 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 229
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 207, 18

Conread position: 22-537
Cow position: chr17:20993377-20992864 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 208

Conread position: 23-398
Cow position: chr17:44924511-44924153 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 261
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 122, 143

Conread position: 23-476
Cow position: chr17:29472146-29472588 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 306
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 118, 80

Conread position: 23-500
Cow position: chr17:40771493-40771976 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 25

Conread position: 23-511
Cow position: chr17:11618244-11618738 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 152

Conread position: 25-390
Cow position: chr17:42398101-42398464 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 141

Conread position: 25-584
Cow position: chr17:12929877-12929305 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 134

Conread position: 25-618
Cow position: chr17:1410580-1409956 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 145

Conread position: 26-346
Cow position: chr17:3498997-3498679 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 139

Conread position: 26-348
Cow position: chr17:35388346-35388028 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 217
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 150, 13

Conread position: 26-371
Cow position: chr17:19455627-19455302 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 242
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 50, 0

Conread position: 26-390
Cow position: chr17:20361531-20361894 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 251
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 112, 47

Conread position: 26-522
Cow position: chr17:14033980-14033474 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 151

Conread position: 26-533
Cow position: chr17:24883896-24883396 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 66

Conread position: 27-372
Cow position: chr17:21680436-21680775 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 264

Conread position: 27-425
Cow position: chr17:26182890-26183287 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 138

Conread position: 27-448
Cow position: chr17:2034219-2034622 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 291
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 117, 19

Conread position: 27-462
Cow position: chr17:20083844-20083415 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 146

Conread position: 30-371
Cow position: chr17:16895623-16895295 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 230
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 113, 135

Conread position: 31-367
Cow position: chr17:33272001-33271677 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 95

Conread position: 31-513
Cow position: chr17:27795320-27795811 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 134

Conread position: 33-367
Cow position: chr17:37693787-37694119 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 226
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 105, 94

Conread position: 34-355
Cow position: chr17:242314-242631 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 97, 108

Conread position: 35-376
Cow position: chr17:1061382-1061045 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 78

Conread position: 40-367
Cow position: chr17:10473516-10473837 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 150

Conread position: 41-420
Cow position: chr17:3306551-3306925 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 75

Conread position: 42-505
Cow position: chr17:40421352-40421822 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 124

Conread position: 44-448
Cow position: chr17:34079413-34079018 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 122

Conread position: 45-429
Cow position: chr17:2517153-2516771 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 252
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 102, 110

Conread position: 45-429
Cow position: chr17:2520372-2519990 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 253
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 102, 110

Conread position: 45-518
Cow position: chr17:25900885-25901364 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 127

Conread position: 45-531
Cow position: chr17:14026229-14025733 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 143

Conread position: 45-554
Cow position: chr17:38832730-38833242 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 18

Conread position: 46-340
Cow position: chr17:29951230-29951525 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 97, 119

Conread position: 46-634
Cow position: chr17:9117335-9117933 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 34

Conread position: 51-376
Cow position: chr17:11171488-11171807 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 114

Conread position: 54-512
Cow position: chr17:30718721-30718262 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 105

Conread position: 54-622
Cow position: chr17:40331464-40332018 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 111

Conread position: 55-372
Cow position: chr17:1295875-1295559 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 118

Conread position: 55-531
Cow position: chr17:2810312-2810809 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 325
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 82, 42

Conread position: 58-423
Cow position: chr17:3471115-3471488 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 13

Conread position: 60-403
Cow position: chr17:12216370-12216033 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 73

Conread position: 60-512
Cow position: chr17:18109385-18108929 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 113

Conread position: 61-452
Cow position: chr17:5688645-5688264 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 271
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 65, 51

Conread position: 61-459
Cow position: chr17:5224105-5224503 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 104

Conread position: 61-466
Cow position: chr17:28285317-28284917 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 285
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 96, 34

Conread position: 61-522
Cow position: chr17:24973652-24974114 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 113

Conread position: 63-460
Cow position: chr17:38614664-38615065 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 48

Conread position: 64-425
Cow position: chr17:33291092-33290739 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 77

Conread position: 66-509
Cow position: chr17:13244313-13243895 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 300
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 81, 40

Conread position: 73-513
Cow position: chr17:18720730-18720288 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 311
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 70, 43

Conread position: 74-367
Cow position: chr17:21313100-21312805 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 73, 184

Conread position: 75-545
Cow position: chr17:22032967-22032505 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 91

Conread position: 78-388
Cow position: chr17:1080723-1081020 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 209
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 79, 94

Conread position: 82-410
Cow position: chr17:21620437-21620770 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 91

Conread position: 82-526
Cow position: chr17:18472910-18473334 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 34

Conread position: 82-618
Cow position: chr17:8544031-8544563 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 54

Conread position: 83-460
Cow position: chr17:37163805-37163426 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 92

Conread position: 85-381
Cow position: chr17:11296364-11296660 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 215
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 58, 35

Conread position: 86-460
Cow position: chr17:11278295-11277923 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 265
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 203, 59

Conread position: 87-527
Cow position: chr17:20126349-20126768 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 411, 64

Conread position: 88-579
Cow position: chr17:25796611-25796110 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 77

Conread position: 92-354
Cow position: chr17:14051369-14051105 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 73

Conread position: 92-510
Cow position: chr17:18495773-18495366 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 20

Conread position: 93-494
Cow position: chr17:3503312-3503720 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 146

Conread position: 93-624
Cow position: chr17:8079051-8079589 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 72

Conread position: 94-367
Cow position: chr17:42347486-42347221 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 63, 161

Conread position: 94-470
Cow position: chr17:26818717-26818343 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 72

Conread position: 98-513
Cow position: chr17:21115206-21114795 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 77

Conread position: 106-530
Cow position: chr17:17059187-17059599 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 68

Conread position: 108-496
Cow position: chr17:21004082-21003689 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 148

Conread position: 111-361
Cow position: chr17:21031540-21031782 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 36, 44

Conread position: 116-505
Cow position: chr17:20839800-20839417 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 242
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 27, 10

Conread position: 121-426
Cow position: chr17:26627881-26627580 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 201
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 230

Conread position: 121-537
Cow position: chr17:11664826-11664403 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 49

Conread position: 125-539
Cow position: chr17:31481276-31480856 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 286
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 27, 37

Conread position: 126-401
Cow position: chr17:33999277-33999011 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 32, 116

Conread position: 127-367
Cow position: chr17:4721255-4721497 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 102

Conread position: 131-368
Cow position: chr17:21017570-21017803 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 38

Conread position: 131-512
Cow position: chr17:23245989-23246356 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 261
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 285, 37

Conread position: 132-375
Cow position: chr17:7132676-7132438 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 160, 7

Conread position: 132-496
Cow position: chr17:14848744-14848405 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 249
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 206, 7

Conread position: 132-499
Cow position: chr17:6423540-6423908 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 7

Conread position: 132-508
Cow position: chr17:9697926-9697528 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 21

Conread position: 132-523
Cow position: chr17:21755664-21755267 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 275
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 14, 42

Conread position: 132-537
Cow position: chr17:7810964-7810573 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 39

Conread position: 133-511
Cow position: chr17:11832358-11831958 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 281
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 7, 28

Conread position: 139-384
Cow position: chr17:8279922-8279686 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 174, 21

Conread position: 139-469
Cow position: chr17:21739099-21738760 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 21

Conread position: 139-516
Cow position: chr17:11156708-11156335 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 21

Conread position: 140-433
Cow position: chr17:6624043-6624334 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 10, 21

Conread position: 143-334
Cow position: chr17:21710294-21710478 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 143-355
Cow position: chr17:30999565-30999760 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 143-471
Cow position: chr17:11172826-11172499 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 169, 17

Conread position: 143-513
Cow position: chr17:33792971-33793322 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 260
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 157, 17

Conread position: 144-502
Cow position: chr17:27429368-27429713 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 16

Conread position: 144-528
Cow position: chr17:1035814-1035423 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 16

Conread position: 145-341
Cow position: chr17:1359006-1358822 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 145-358
Cow position: chr17:29040675-29040469 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 142, 16

Conread position: 145-363
Cow position: chr17:27765072-27765271 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 145-366
Cow position: chr17:16307171-16307383 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 168, 23

Conread position: 145-373
Cow position: chr17:39012509-39012737 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 144, 26

Conread position: 145-376
Cow position: chr17:18245866-18246092 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 156
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 168, 15

Conread position: 145-383
Cow position: chr17:33403149-33402916 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 143, 15

Conread position: 145-414
Cow position: chr17:20835384-20835642 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 145-417
Cow position: chr17:9778042-9778307 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 154, 15

Conread position: 145-435
Cow position: chr17:966948-966661 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 143, 15

Conread position: 145-459
Cow position: chr17:34948431-34948738 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 215
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 161, 16

Conread position: 145-466
Cow position: chr17:1275310-1275634 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 15

Conread position: 145-512
Cow position: chr17:17405929-17406290 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 23

Conread position: 145-521
Cow position: chr17:1020776-1020396 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 243
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 15

Conread position: 145-522
Cow position: chr17:10446707-10447078 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 253
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 253, 23

Conread position: 145-522
Cow position: chr17:24587409-24587792 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 23

Conread position: 145-523
Cow position: chr17:25097254-25097623 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 16

Conread position: 145-525
Cow position: chr17:38200975-38200594 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 256
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 142, 24

Conread position: 145-530
Cow position: chr17:12325955-12325589 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 353, 15

Conread position: 145-531
Cow position: chr17:25128558-25128180 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 15

Conread position: 145-531
Cow position: chr17:40741438-40741829 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 275
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 141, 23

Conread position: 145-532
Cow position: chr17:7436957-7437343 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 254
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 151, 16

Conread position: 145-538
Cow position: chr17:35126505-35126889 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 277
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 220, 23

Conread position: 146-512
Cow position: chr17:12220146-12219781 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 242
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 208, 14

Conread position: 148-355
Cow position: chr17:10220275-10220469 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 148-355
Cow position: chr17:38994179-38994384 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 152, 36

Conread position: 148-523
Cow position: chr17:24004188-24004542 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 266
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 202, 20

Conread position: 149-367
Cow position: chr17:21628277-21628485 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 147, 11

Conread position: 149-384
Cow position: chr17:41892276-41892043 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 28, 0

Conread position: 150-377
Cow position: chr17:44232924-44232699 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 139, 8

Conread position: 155-531
Cow position: chr17:32279110-32278730 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 257
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 209, 107

Conread position: 158-367
Cow position: chr17:35311223-35311432 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 92, 12

Conread position: 159-365
Cow position: chr17:25141261-25141450 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 160-372
Cow position: chr17:32950074-32950284 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 129, 101

Conread position: 161-367
Cow position: chr17:26881532-26881328 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 25

Conread position: 161-414
Cow position: chr17:21207332-21207080 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 140

Conread position: 161-512
Cow position: chr17:33275943-33275592 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 229
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 125, 91

Conread position: 163-511
Cow position: chr17:9911568-9911914 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 246
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 43, 86

Conread position: 167-447
Cow position: chr17:20870292-20870006 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 25, 70

Conread position: 169-466
Cow position: chr17:8837140-8836837 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 12, 61

Conread position: 171-321
Cow position: chr17:36533474-36533616 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 171-351
Cow position: chr17:26515923-26515744 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 79, 0

Conread position: 171-465
Cow position: chr17:553158-552860 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 213
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 96

Conread position: 171-483
Cow position: chr17:18824603-18824914 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 212
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 140, 76

Conread position: 171-513
Cow position: chr17:27047976-27048314 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 244
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 121, 31

Conread position: 171-532
Cow position: chr17:21599869-21599507 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 248
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 122, 32

Conread position: 173-371
Cow position: chr17:22781502-22781701 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 116, 0

Conread position: 173-502
Cow position: chr17:12536653-12536317 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 74

Conread position: 174-345
Cow position: chr17:3182769-3182601 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 140
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 61, 0

Conread position: 174-364
Cow position: chr17:5514575-5514762 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 118, 28

Conread position: 174-372
Cow position: chr17:24490337-24490538 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 122, 0

Conread position: 174-387
Cow position: chr17:21697548-21697766 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 118, 0

Conread position: 174-388
Cow position: chr17:4824310-4824524 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 188, 46

Conread position: 174-448
Cow position: chr17:7648036-7648305 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 118, 67

Conread position: 174-469
Cow position: chr17:20157431-20157721 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 190, 56

Conread position: 174-475
Cow position: chr17:38646880-38647181 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 67

Conread position: 174-511
Cow position: chr17:5423256-5422912 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 26

Conread position: 174-512
Cow position: chr17:9746334-9746670 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 73

Conread position: 174-520
Cow position: chr17:32471978-32471615 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 271

Conread position: 174-524
Cow position: chr17:24773499-24773849 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 243
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 176, 77

Conread position: 174-526
Cow position: chr17:908562-908912 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 73

Conread position: 174-527
Cow position: chr17:37480177-37479831 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 235
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 122, 83

Conread position: 174-531
Cow position: chr17:1063005-1063345 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 187, 65

Conread position: 174-531
Cow position: chr17:25999932-26000293 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 240
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 199, 83

Conread position: 174-535
Cow position: chr17:10459119-10458753 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 187, 9

Conread position: 174-545
Cow position: chr17:4225675-4225312 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 71

Conread position: 174-562
Cow position: chr17:32554210-32553850 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 274
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 294, 123

Conread position: 176-512
Cow position: chr17:3577356-3577695 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 162

Conread position: 177-376
Cow position: chr17:33926306-33926112 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 58, 0

Conread position: 177-428
Cow position: chr17:41290199-41289947 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 192, 43

Conread position: 177-526
Cow position: chr17:24787202-24786854 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 112

Conread position: 180-461
Cow position: chr17:27819122-27819401 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 188
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 51

Conread position: 180-530
Cow position: chr17:33052685-33053026 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 239
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 112, 50

Conread position: 181-376
Cow position: chr17:12270092-12269901 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 106, 42

Conread position: 181-376
Cow position: chr17:12278313-12278510 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 181-390
Cow position: chr17:1522715-1522505 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 106, 0

Conread position: 181-415
Cow position: chr17:14724461-14724226 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 5, 16

Conread position: 181-502
Cow position: chr17:39771219-39771545 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 219
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 185, 109

Conread position: 181-511
Cow position: chr17:12590986-12591328 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 334

Conread position: 183-364
Cow position: chr17:24149002-24149186 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 108, 0

Conread position: 183-509
Cow position: chr17:15684330-15684665 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 72

Conread position: 185-348
Cow position: chr17:27262554-27262717 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 102, 11

Conread position: 185-376
Cow position: chr17:12946538-12946345 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 74

Conread position: 188-581
Cow position: chr17:21918044-21917654 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 276
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 103, 54

Conread position: 190-421
Cow position: chr17:34207988-34207747 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 63

Conread position: 190-464
Cow position: chr17:12447567-12447283 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 215
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 177, 40

Conread position: 190-511
Cow position: chr17:24821698-24822018 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 51

Conread position: 190-512
Cow position: chr17:20932161-20932489 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 50

Conread position: 190-513
Cow position: chr17:20990362-20990031 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 51

Conread position: 193-357
Cow position: chr17:34650278-34650444 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 103, 13

Conread position: 193-417
Cow position: chr17:10510827-10510593 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 0

Conread position: 193-439
Cow position: chr17:18419507-18419754 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 110, 194

Conread position: 193-496
Cow position: chr17:32018053-32017751 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 209
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 19, 29

Conread position: 193-545
Cow position: chr17:32273849-32273496 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 26

Conread position: 194-511
Cow position: chr17:25032636-25032328 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 221
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 153, 88

Conread position: 194-562
Cow position: chr17:5398600-5398236 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 248
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 102, 58

Conread position: 196-440
Cow position: chr17:24031854-24032106 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 167
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 197-367
Cow position: chr17:33121930-33122100 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 197-373
Cow position: chr17:21298063-21298243 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 92, 31

Conread position: 197-412
Cow position: chr17:1353235-1353456 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 172, 64

Conread position: 197-442
Cow position: chr17:25916731-25916982 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 94, 231

Conread position: 197-465
Cow position: chr17:7142703-7142971 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 102, 50

Conread position: 197-512
Cow position: chr17:1562935-1562629 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 221
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 298, 65

Conread position: 197-512
Cow position: chr17:27058714-27058401 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 221
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 172, 54

Conread position: 198-528
Cow position: chr17:44147136-44146800 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 227
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 94, 229

Conread position: 198-533
Cow position: chr17:26631976-26631635 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 227
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 96, 203

Conread position: 199-367
Cow position: chr17:38613087-38613252 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 90, 39

Conread position: 199-516
Cow position: chr17:28467977-28468281 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 217, 52

Conread position: 200-367
Cow position: chr17:40792065-40792225 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 200-481
Cow position: chr17:14762277-14761996 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 88, 28

Conread position: 200-513
Cow position: chr17:31037538-31037218 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 47

Conread position: 202-481
Cow position: chr17:4967954-4968238 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 119

Conread position: 203-367
Cow position: chr17:267739-267580 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 33

Conread position: 204-535
Cow position: chr17:9966187-9965848 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 229
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 226

Conread position: 206-356
Cow position: chr17:37857879-37857729 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 89, 39

Conread position: 206-460
Cow position: chr17:31701285-31701536 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 85, 45

Conread position: 206-509
Cow position: chr17:21414991-21414677 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 213
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 81, 158

Conread position: 206-509
Cow position: chr17:21437474-21437160 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 210
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 81, 289

Conread position: 207-526
Cow position: chr17:3467618-3467924 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 232
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 166, 38

Conread position: 210-514
Cow position: chr17:1634633-1634332 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 227
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 128, 35

Conread position: 210-535
Cow position: chr17:25117742-25118061 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 220
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 13

Conread position: 211-465
Cow position: chr17:6328961-6329225 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 81, 221

Conread position: 211-465
Cow position: chr17:36500654-36500912 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 170
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 156, 222

Conread position: 216-376
Cow position: chr17:34834362-34834200 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 219-460
Cow position: chr17:24928340-24928580 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 22

Conread position: 221-364
Cow position: chr17:31581343-31581485 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 70

Conread position: 224-355
Cow position: chr17:11962687-11962556 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 110

Conread position: 224-383
Cow position: chr17:6897082-6896924 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 63, 126

Conread position: 224-465
Cow position: chr17:26233964-26233720 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 150, 66

Conread position: 224-531
Cow position: chr17:32280531-32280842 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 214
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 140, 38

Conread position: 227-465
Cow position: chr17:40673251-40673480 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 72, 111

Conread position: 230-561
Cow position: chr17:27833493-27833152 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 231
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 56, 175

Conread position: 231-533
Cow position: chr17:1113754-1114066 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 208
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 55, 212

Conread position: 232-367
Cow position: chr17:11921412-11921276 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 101
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 232-460
Cow position: chr17:14060906-14060669 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 66, 166

Conread position: 233-531
Cow position: chr17:27184069-27183767 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 207
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 66, 23

Conread position: 233-537
Cow position: chr17:10432102-10431792 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 209
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 128, 25

Conread position: 235-505
Cow position: chr17:4300045-4299778 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 129, 18

Conread position: 237-384
Cow position: chr17:33411147-33410998 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 59, 127

Conread position: 237-443
Cow position: chr17:27564997-27565209 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 166

Conread position: 237-542
Cow position: chr17:20874266-20874583 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 213
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 51, 8

Conread position: 238-615
Cow position: chr17:6848681-6849058 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 263
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 35, 110

Conread position: 238-622
Cow position: chr17:33658190-33657790 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 15

Conread position: 243-471
Cow position: chr17:32348955-32349183 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 103, 47

Conread position: 244-469
Cow position: chr17:36275228-36275447 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 136, 14

Conread position: 244-528
Cow position: chr17:31856545-31856843 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 208
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 195

Conread position: 245-474
Cow position: chr17:39857276-39857509 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 53, 45

Conread position: 245-505
Cow position: chr17:1040629-1040895 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 190

Conread position: 246-527
Cow position: chr17:25616145-25616420 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 110, 15

Conread position: 249-361
Cow position: chr17:25122521-25122408 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 43, 100

Conread position: 249-367
Cow position: chr17:14883197-14883078 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 249-373
Cow position: chr17:12768893-12768769 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 249-471
Cow position: chr17:23798169-23798397 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 119, 11

Conread position: 249-505
Cow position: chr17:23563902-23563644 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 101, 23

Conread position: 249-511
Cow position: chr17:10561517-10561788 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 180
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 114, 176

Conread position: 249-527
Cow position: chr17:24559180-24559463 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 43, 99

Conread position: 249-553
Cow position: chr17:11215342-11215036 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 59

Conread position: 251-622
Cow position: chr17:21758257-21757880 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 178

Conread position: 252-581
Cow position: chr17:7136872-7137197 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 221
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 150

Conread position: 255-518
Cow position: chr17:35339022-35338757 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 122, 166

Conread position: 258-570
Cow position: chr17:34751509-34751194 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 213
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 103, 163

Conread position: 258-624
Cow position: chr17:15340856-15340483 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 72

Conread position: 259-428
Cow position: chr17:32009540-32009365 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 106, 14

Conread position: 260-634
Cow position: chr17:21325231-21325596 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 273
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 107, 89

Conread position: 262-524
Cow position: chr17:35573663-35573922 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 108, 62

Conread position: 263-509
Cow position: chr17:3353782-3354037 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 203

Conread position: 263-512
Cow position: chr17:11912596-11912348 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 59, 89

Conread position: 264-533
Cow position: chr17:25514221-25513944 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 100, 160

Conread position: 266-474
Cow position: chr17:36864535-36864749 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 80, 162

Conread position: 267-496
Cow position: chr17:27203139-27202905 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 160

Conread position: 267-561
Cow position: chr17:23517037-23516737 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 155

Conread position: 270-534
Cow position: chr17:21489716-21489448 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 158

Conread position: 274-533
Cow position: chr17:25342828-25342566 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 124

Conread position: 277-554
Cow position: chr17:5850431-5850149 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 137, 92

Conread position: 280-495
Cow position: chr17:11368932-11368710 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 93, 31

Conread position: 283-510
Cow position: chr17:9824590-9824825 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 79, 104

Conread position: 283-612
Cow position: chr17:39715079-39715415 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 236
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 84, 148

Conread position: 284-523
Cow position: chr17:40406366-40406616 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 65

Conread position: 285-512
Cow position: chr17:2275398-2275625 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 139

Conread position: 285-532
Cow position: chr17:29025991-29026248 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 147

Conread position: 288-513
Cow position: chr17:12511049-12510822 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 17, 140

Conread position: 289-469
Cow position: chr17:21478995-21478808 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 80, 151

Conread position: 293-508
Cow position: chr17:40638881-40639100 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 71, 140

Conread position: 296-512
Cow position: chr17:1025886-1025667 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 70, 127

Conread position: 297-510
Cow position: chr17:24750852-24751065 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 68, 120

Conread position: 297-527
Cow position: chr17:34791131-34790891 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 72, 126

Conread position: 300-519
Cow position: chr17:39606367-39606595 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 7, 45

Conread position: 303-523
Cow position: chr17:5372588-5372358 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 66, 135

Conread position: 310-513
Cow position: chr17:22051644-22051431 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 133

Conread position: 310-531
Cow position: chr17:32333144-32332915 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 59, 120

Conread position: 313-510
Cow position: chr17:11306169-11306361 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 58

Conread position: 314-513
Cow position: chr17:21039516-21039716 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 61, 18

Conread position: 314-618
Cow position: chr17:22017135-22016829 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 231
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 57, 116

Conread position: 319-526
Cow position: chr17:25800925-25800711 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 45, 108

Conread position: 330-622
Cow position: chr17:6082477-6082776 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 211
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 24, 182

Conread position: 362-524
Cow position: chr17:42150400-42150559 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 127, 56

Conread position: 363-634
Cow position: chr17:22048777-22048507 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 214, 7

Conread position: 364-525
Cow position: chr17:29995425-29995265 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 131, 54

Conread position: 367-511
Cow position: chr17:18848144-18848002 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 374-511
Cow position: chr17:11478790-11478924 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 378-523
Cow position: chr17:18109524-18109379 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 117, 42

Conread position: 380-622
Cow position: chr17:42697320-42697566 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 5, 54

Conread position: 382-618
Cow position: chr17:5743262-5743021 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 116, 50

Conread position: 382-621
Cow position: chr17:9713313-9713083 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 115, 38

Conread position: 385-622
Cow position: chr17:42744488-42744732 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 122, 48

Conread position: 428-622
Cow position: chr17:10510399-10510197 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 190

Conread position: 428-648
Cow position: chr17:21206430-21206201 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 70, 220

Show alignments to all cow chromosomes.