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Cow genome map

           
Conread name:
           
Mixn-0015i14
        

               
Conread position:
               
2-348
               

               
Cow position:
               
chr18:52629340-52628993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
141, 18
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr18:3190662-3191050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 18
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr18:4432644-4433032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 18
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr18:22591554-22591164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 18
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr18:29387804-29388173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 18
               

               
Conread position:
               
2-415
               

               
Cow position:
               
chr18:19356441-19356854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 18
               

               
Conread position:
               
2-415
               

               
Cow position:
               
chr18:22181535-22181123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
143, 18
               

               
Conread position:
               
2-447
               

               
Cow position:
               
chr18:6103531-6103079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 18
               

               
Conread position:
               
2-502
               

               
Cow position:
               
chr18:9089277-9089773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 18
               

               
Conread position:
               
2-503
               

               
Cow position:
               
chr18:26938558-26939058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 18
               

               
Conread position:
               
2-511
               

               
Cow position:
               
chr18:3416744-3417238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 18
               

               
Conread position:
               
2-524
               

               
Cow position:
               
chr18:9974754-9974233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
2-530
               

               
Cow position:
               
chr18:31082768-31082245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 21
               

               
Conread position:
               
2-564
               

               
Cow position:
               
chr18:4796542-4797112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 18
               

               
Conread position:
               
3-354
               

               
Cow position:
               
chr18:37021498-37021854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 17
               

               
Conread position:
               
3-367
               

               
Cow position:
               
chr18:22275470-22275103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
131, 17
               

               
Conread position:
               
3-368
               

               
Cow position:
               
chr18:13293081-13293444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 17
               

               
Conread position:
               
3-373
               

               
Cow position:
               
chr18:26573065-26572695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 20
               

               
Conread position:
               
3-376
               

               
Cow position:
               
chr18:6665782-6665415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
154, 17
               

               
Conread position:
               
3-376
               

               
Cow position:
               
chr18:45979276-45979641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 17
               

               
Conread position:
               
3-407
               

               
Cow position:
               
chr18:44235770-44236179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 19
               

               
Conread position:
               
3-412
               

               
Cow position:
               
chr18:41238444-41238858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
155, 17
               

               
Conread position:
               
3-427
               

               
Cow position:
               
chr18:22092361-22092771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 17
               

               
Conread position:
               
3-511
               

               
Cow position:
               
chr18:22121308-22120802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 13
               

               
Conread position:
               
3-520
               

               
Cow position:
               
chr18:22790495-22789993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 17
               

               
Conread position:
               
3-526
               

               
Cow position:
               
chr18:6881757-6881257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
361, 27
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr18:16378544-16378804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr18:16045425-16045076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
140, 15
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr18:47314724-47314363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 15
               

               
Conread position:
               
5-363
               

               
Cow position:
               
chr18:33756465-33756804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 88
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr18:81337-81740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 19
               

               
Conread position:
               
5-435
               

               
Cow position:
               
chr18:7486826-7487256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 15
               

               
Conread position:
               
5-460
               

               
Cow position:
               
chr18:13172952-13172501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 163
               

               
Conread position:
               
5-484
               

               
Cow position:
               
chr18:11618056-11618523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 25
               

               
Conread position:
               
5-495
               

               
Cow position:
               
chr18:51211740-51212249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 15
               

               
Conread position:
               
5-501
               

               
Cow position:
               
chr18:28658334-28657838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 15
               

               
Conread position:
               
5-505
               

               
Cow position:
               
chr18:29357063-29356549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 15
               

               
Conread position:
               
5-508
               

               
Cow position:
               
chr18:23766846-23766329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 15
               

               
Conread position:
               
5-510
               

               
Cow position:
               
chr18:37002209-37002712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 15
               

               
Conread position:
               
5-511
               

               
Cow position:
               
chr18:38686676-38687160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 15
               

               
Conread position:
               
5-511
               

               
Cow position:
               
chr18:51691894-51691379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 15
               

               
Conread position:
               
5-513
               

               
Cow position:
               
chr18:50082659-50082172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 15
               

               
Conread position:
               
5-520
               

               
Cow position:
               
chr18:3179994-3180499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 15
               

               
Conread position:
               
5-528
               

               
Cow position:
               
chr18:7649566-7650083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 15
               

               
Conread position:
               
5-529
               

               
Cow position:
               
chr18:9010307-9010809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 14
               

               
Conread position:
               
5-534
               

               
Cow position:
               
chr18:28101200-28101737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 15
               

               
Conread position:
               
5-559
               

               
Cow position:
               
chr18:30794029-30794558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 15
               

               
Conread position:
               
6-482
               

               
Cow position:
               
chr18:55589900-55589439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 69
               

               
Conread position:
               
7-520
               

               
Cow position:
               
chr18:34527531-34527000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 13
               

               
Conread position:
               
8-327
               

               
Cow position:
               
chr18:52632844-52632509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
12, 173
               

               
Conread position:
               
8-348
               

               
Cow position:
               
chr18:49161879-49161530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 10
               

               
Conread position:
               
8-367
               

               
Cow position:
               
chr18:7955724-7956075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
8-367
               

               
Cow position:
               
chr18:35057926-35058271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 32
               

               
Conread position:
               
8-367
               

               
Cow position:
               
chr18:42966415-42966796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 12
               

               
Conread position:
               
8-367
               

               
Cow position:
               
chr18:51713132-51712769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 12
               

               
Conread position:
               
8-373
               

               
Cow position:
               
chr18:56151077-56150712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 15
               

               
Conread position:
               
8-460
               

               
Cow position:
               
chr18:51406314-51405875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 17
               

               
Conread position:
               
8-465
               

               
Cow position:
               
chr18:4182621-4182151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
8-466
               

               
Cow position:
               
chr18:30248551-30248102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
8-496
               

               
Cow position:
               
chr18:55782849-55782363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
8-500
               

               
Cow position:
               
chr18:47183708-47183221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 12
               

               
Conread position:
               
8-502
               

               
Cow position:
               
chr18:45570605-45571086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 12
               

               
Conread position:
               
8-505
               

               
Cow position:
               
chr18:50637883-50637396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
8-510
               

               
Cow position:
               
chr18:30360546-30360067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 159
               

               
Conread position:
               
8-510
               

               
Cow position:
               
chr18:55787508-55788003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 12
               

               
Conread position:
               
8-511
               

               
Cow position:
               
chr18:17004831-17005341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 12
               

               
Conread position:
               
8-512
               

               
Cow position:
               
chr18:31672925-31672429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 74
               

               
Conread position:
               
8-512
               

               
Cow position:
               
chr18:37023979-37023466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 12
               

               
Conread position:
               
8-513
               

               
Cow position:
               
chr18:12118268-12117767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 12
               

               
Conread position:
               
8-524
               

               
Cow position:
               
chr18:11183512-11184036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
8-532
               

               
Cow position:
               
chr18:18919361-18918856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
278, 15
               

               
Conread position:
               
8-533
               

               
Cow position:
               
chr18:43284174-43283654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 12
               

               
Conread position:
               
8-620
               

               
Cow position:
               
chr18:35012728-35012113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 12
               

               
Conread position:
               
8-622
               

               
Cow position:
               
chr18:40758789-40759386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 12
               

               
Conread position:
               
9-346
               

               
Cow position:
               
chr18:19123754-19124090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
88, 154
               

               
Conread position:
               
9-372
               

               
Cow position:
               
chr18:33606208-33606568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 46
               

               
Conread position:
               
9-376
               

               
Cow position:
               
chr18:11368201-11367819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 241
               

               
Conread position:
               
9-376
               

               
Cow position:
               
chr18:16842495-16842122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
33, 152
               

               
Conread position:
               
9-383
               

               
Cow position:
               
chr18:22065784-22065406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 155
               

               
Conread position:
               
9-511
               

               
Cow position:
               
chr18:4540294-4539800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 11
               

               
Conread position:
               
10-376
               

               
Cow position:
               
chr18:21938933-21939299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
131, 117
               

               
Conread position:
               
10-511
               

               
Cow position:
               
chr18:15172624-15173096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
393, 10
               

               
Conread position:
               
11-361
               

               
Cow position:
               
chr18:3209303-3209639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
123, 9
               

               
Conread position:
               
11-367
               

               
Cow position:
               
chr18:24021971-24022308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
136, 9
               

               
Conread position:
               
11-377
               

               
Cow position:
               
chr18:43563808-43564172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 9
               

               
Conread position:
               
11-378
               

               
Cow position:
               
chr18:6290365-6290730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 19
               

               
Conread position:
               
11-398
               

               
Cow position:
               
chr18:26937306-26937692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
135, 213
               

               
Conread position:
               
11-448
               

               
Cow position:
               
chr18:20864567-20864999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 6
               

               
Conread position:
               
11-471
               

               
Cow position:
               
chr18:39002215-39001765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 9
               

               
Conread position:
               
11-485
               

               
Cow position:
               
chr18:26535919-26535451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
129, 6
               

               
Conread position:
               
11-500
               

               
Cow position:
               
chr18:11866935-11867412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 65
               

               
Conread position:
               
11-503
               

               
Cow position:
               
chr18:19193765-19193290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
12-367
               

               
Cow position:
               
chr18:19159382-19159040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 8
               

               
Conread position:
               
12-367
               

               
Cow position:
               
chr18:36097798-36098135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 8
               

               
Conread position:
               
12-382
               

               
Cow position:
               
chr18:24342205-24342565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 96
               

               
Conread position:
               
12-526
               

               
Cow position:
               
chr18:11790522-11791019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
135, 8
               

               
Conread position:
               
12-531
               

               
Cow position:
               
chr18:5190099-5189590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 137
               

               
Conread position:
               
12-534
               

               
Cow position:
               
chr18:38606817-38607327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 8
               

               
Conread position:
               
13-459
               

               
Cow position:
               
chr18:7950693-7951145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 147
               

               
Conread position:
               
18-375
               

               
Cow position:
               
chr18:19850159-19849815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 146
               

               
Conread position:
               
19-356
               

               
Cow position:
               
chr18:5646830-5647169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
115, 27
               

               
Conread position:
               
19-464
               

               
Cow position:
               
chr18:55462121-55461671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 21
               

               
Conread position:
               
19-475
               

               
Cow position:
               
chr18:13508139-13507694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 142
               

               
Conread position:
               
20-348
               

               
Cow position:
               
chr18:43473512-43473841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
123, 155
               

               
Conread position:
               
20-425
               

               
Cow position:
               
chr18:42608741-42608326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 170
               

               
Conread position:
               
23-345
               

               
Cow position:
               
chr18:7946966-7947298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
120, 155
               

               
Conread position:
               
23-367
               

               
Cow position:
               
chr18:35636756-35636416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 147
               

               
Conread position:
               
23-451
               

               
Cow position:
               
chr18:16044558-16044129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
134, 43
               

               
Conread position:
               
23-505
               

               
Cow position:
               
chr18:20125897-20126382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 102
               

               
Conread position:
               
24-367
               

               
Cow position:
               
chr18:36445022-36445371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 68
               

               
Conread position:
               
24-382
               

               
Cow position:
               
chr18:28794473-28794121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
128, 32
               

               
Conread position:
               
24-471
               

               
Cow position:
               
chr18:55552557-55553009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 149
               

               
Conread position:
               
25-378
               

               
Cow position:
               
chr18:56362007-56361658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 86
               

               
Conread position:
               
25-415
               

               
Cow position:
               
chr18:11309005-11309400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
52, 151
               

               
Conread position:
               
26-367
               

               
Cow position:
               
chr18:35075980-35076317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 130
               

               
Conread position:
               
26-456
               

               
Cow position:
               
chr18:25003283-25002861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 140
               

               
Conread position:
               
26-456
               

               
Cow position:
               
chr18:33793298-33793721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 209
               

               
Conread position:
               
26-511
               

               
Cow position:
               
chr18:36458528-36459014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 139
               

               
Conread position:
               
27-390
               

               
Cow position:
               
chr18:36632314-36631951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
110, 5
               

               
Conread position:
               
27-415
               

               
Cow position:
               
chr18:215442-215051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
14, 164
               

               
Conread position:
               
28-383
               

               
Cow position:
               
chr18:18340356-18340020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 5
               

               
Conread position:
               
28-511
               

               
Cow position:
               
chr18:20641884-20641413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 113
               

               
Conread position:
               
28-512
               

               
Cow position:
               
chr18:45904295-45903813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 56
               

               
Conread position:
               
28-513
               

               
Cow position:
               
chr18:12241872-12242360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 33
               

               
Conread position:
               
31-459
               

               
Cow position:
               
chr18:3027766-3027330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 151
               

               
Conread position:
               
34-509
               

               
Cow position:
               
chr18:55505006-55505485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 128
               

               
Conread position:
               
37-357
               

               
Cow position:
               
chr18:4624824-4624509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 128
               

               
Conread position:
               
37-472
               

               
Cow position:
               
chr18:5486856-5487285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 118
               

               
Conread position:
               
37-513
               

               
Cow position:
               
chr18:47511599-47512091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 137
               

               
Conread position:
               
37-531
               

               
Cow position:
               
chr18:29796828-29796327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 91
               

               
Conread position:
               
39-504
               

               
Cow position:
               
chr18:33299512-33299980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 38
               

               
Conread position:
               
39-535
               

               
Cow position:
               
chr18:39662384-39662881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
107, 116
               

               
Conread position:
               
41-367
               

               
Cow position:
               
chr18:11191032-11191361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
48, 94
               

               
Conread position:
               
41-372
               

               
Cow position:
               
chr18:23447469-23447145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 89
               

               
Conread position:
               
45-348
               

               
Cow position:
               
chr18:49665544-49665246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 191
               

               
Conread position:
               
48-512
               

               
Cow position:
               
chr18:44262234-44262714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 132
               

               
Conread position:
               
49-415
               

               
Cow position:
               
chr18:56045790-56046158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
94, 136
               

               
Conread position:
               
49-622
               

               
Cow position:
               
chr18:15881237-15880663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 78
               

               
Conread position:
               
53-510
               

               
Cow position:
               
chr18:54974368-54973925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 18
               

               
Conread position:
               
54-383
               

               
Cow position:
               
chr18:55396939-55397252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 108
               

               
Conread position:
               
54-451
               

               
Cow position:
               
chr18:33407244-33407639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 79
               

               
Conread position:
               
55-361
               

               
Cow position:
               
chr18:9818463-9818764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
102, 65
               

               
Conread position:
               
55-451
               

               
Cow position:
               
chr18:11831766-11832142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 32
               

               
Conread position:
               
56-469
               

               
Cow position:
               
chr18:20174506-20174089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 109
               

               
Conread position:
               
59-381
               

               
Cow position:
               
chr18:18627701-18627374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 97
               

               
Conread position:
               
60-538
               

               
Cow position:
               
chr18:29058864-29058391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 65
               

               
Conread position:
               
61-499
               

               
Cow position:
               
chr18:10575741-10576181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 104
               

               
Conread position:
               
61-544
               

               
Cow position:
               
chr18:45104818-45104322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 106
               

               
Conread position:
               
63-348
               

               
Cow position:
               
chr18:30843910-30843616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
80, 142
               

               
Conread position:
               
63-367
               

               
Cow position:
               
chr18:35537579-35537302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
224, 62
               

               
Conread position:
               
64-347
               

               
Cow position:
               
chr18:48407422-48407703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
64-524
               

               
Cow position:
               
chr18:10954114-10954561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 6
               

               
Conread position:
               
67-427
               

               
Cow position:
               
chr18:32121425-32121067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
60, 8
               

               
Conread position:
               
71-407
               

               
Cow position:
               
chr18:18562899-18562556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
81, 187
               

               
Conread position:
               
71-497
               

               
Cow position:
               
chr18:4666569-4666149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 91
               

               
Conread position:
               
73-470
               

               
Cow position:
               
chr18:11811619-11811989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
76-469
               

               
Cow position:
               
chr18:35797265-35797659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
58, 103
               

               
Conread position:
               
83-511
               

               
Cow position:
               
chr18:56159110-56159541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
21, 99
               

               
Conread position:
               
84-416
               

               
Cow position:
               
chr18:47745704-47746041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
59, 105
               

               
Conread position:
               
85-505
               

               
Cow position:
               
chr18:49100717-49100291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
86-523
               

               
Cow position:
               
chr18:56181801-56181363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
57, 79
               

               
Conread position:
               
87-366
               

               
Cow position:
               
chr18:24956951-24957232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
87-471
               

               
Cow position:
               
chr18:4749226-4748840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 84
               

               
Conread position:
               
89-511
               

               
Cow position:
               
chr18:19619607-19620023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 53
               

               
Conread position:
               
90-415
               

               
Cow position:
               
chr18:47709498-47709829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
51, 103
               

               
Conread position:
               
91-502
               

               
Cow position:
               
chr18:44802224-44801815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 74
               

               
Conread position:
               
92-373
               

               
Cow position:
               
chr18:18958129-18957857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
92-377
               

               
Cow position:
               
chr18:51298140-51298421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
92-451
               

               
Cow position:
               
chr18:8105283-8104917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 83
               

               
Conread position:
               
93-526
               

               
Cow position:
               
chr18:9365576-9366019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 10
               

               
Conread position:
               
101-348
               

               
Cow position:
               
chr18:238675-238430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
102-469
               

               
Cow position:
               
chr18:29958476-29958124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 64
               

               
Conread position:
               
105-623
               

               
Cow position:
               
chr18:11233104-11233607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
107-531
               

               
Cow position:
               
chr18:55001061-55000637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
109-327
               

               
Cow position:
               
chr18:1733514-1733301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
187, 119
               

               
Conread position:
               
111-533
               

               
Cow position:
               
chr18:4884836-4884419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 43
               

               
Conread position:
               
113-491
               

               
Cow position:
               
chr18:44484077-44483711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 42
               

               
Conread position:
               
125-428
               

               
Cow position:
               
chr18:44549214-44548911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
32, 106
               

               
Conread position:
               
126-463
               

               
Cow position:
               
chr18:2592472-2592134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 6
               

               
Conread position:
               
126-505
               

               
Cow position:
               
chr18:11684686-11685059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 38
               

               
Conread position:
               
128-561
               

               
Cow position:
               
chr18:46727289-46727721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
132-345
               

               
Cow position:
               
chr18:50700369-50700581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
132-367
               

               
Cow position:
               
chr18:48290734-48290510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
132-461
               

               
Cow position:
               
chr18:23424628-23424951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
132-465
               

               
Cow position:
               
chr18:13359768-13360090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 7
               

               
Conread position:
               
132-634
               

               
Cow position:
               
chr18:39875554-39875067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 29
               

               
Conread position:
               
134-361
               

               
Cow position:
               
chr18:26586959-26586731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
5, 27
               

               
Conread position:
               
137-376
               

               
Cow position:
               
chr18:19831007-19831249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
104, 23
               

               
Conread position:
               
138-348
               

               
Cow position:
               
chr18:16642697-16642904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 22
               

               
Conread position:
               
139-367
               

               
Cow position:
               
chr18:25970920-25970701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
223, 29
               

               
Conread position:
               
139-393
               

               
Cow position:
               
chr18:37703132-37702901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
139-502
               

               
Cow position:
               
chr18:38985399-38985773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 21
               

               
Conread position:
               
139-511
               

               
Cow position:
               
chr18:10891239-10891597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
228, 32
               

               
Conread position:
               
139-512
               

               
Cow position:
               
chr18:25282843-25282471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 29
               

               
Conread position:
               
139-559
               

               
Cow position:
               
chr18:28924120-28923719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
140-469
               

               
Cow position:
               
chr18:6610145-6609817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 27
               

               
Conread position:
               
143-415
               

               
Cow position:
               
chr18:12122953-12122685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
144, 44
               

               
Conread position:
               
145-322
               

               
Cow position:
               
chr18:56163305-56163474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
145-355
               

               
Cow position:
               
chr18:11680438-11680644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
145-367
               

               
Cow position:
               
chr18:54658019-54658242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
148, 16
               

               
Conread position:
               
145-376
               

               
Cow position:
               
chr18:11166697-11166921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
141, 15
               

               
Conread position:
               
145-376
               

               
Cow position:
               
chr18:21175898-21176128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
168, 13
               

               
Conread position:
               
145-382
               

               
Cow position:
               
chr18:42455302-42455083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
167, 23
               

               
Conread position:
               
145-428
               

               
Cow position:
               
chr18:4649017-4648746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
151, 23
               

               
Conread position:
               
145-447
               

               
Cow position:
               
chr18:268093-267801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
147, 15
               

               
Conread position:
               
145-460
               

               
Cow position:
               
chr18:51656335-51656011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
148, 23
               

               
Conread position:
               
145-478
               

               
Cow position:
               
chr18:25206474-25206139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
233, 23
               

               
Conread position:
               
145-510
               

               
Cow position:
               
chr18:55789274-55788915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
107, 16
               

               
Conread position:
               
145-512
               

               
Cow position:
               
chr18:3422438-3422782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
350, 15
               

               
Conread position:
               
145-512
               

               
Cow position:
               
chr18:33158672-33159026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 82
               

               
Conread position:
               
145-558
               

               
Cow position:
               
chr18:31586646-31586246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
143, 15
               

               
Conread position:
               
149-356
               

               
Cow position:
               
chr18:39115422-39115219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
137, 19
               

               
Conread position:
               
149-367
               

               
Cow position:
               
chr18:35827693-35827478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
84, 11
               

               
Conread position:
               
149-528
               

               
Cow position:
               
chr18:10904568-10904944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 11
               

               
Conread position:
               
152-343
               

               
Cow position:
               
chr18:5711943-5711759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
140, 9
               

               
Conread position:
               
152-550
               

               
Cow position:
               
chr18:3044155-3044564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
134, 18
               

               
Conread position:
               
155-368
               

               
Cow position:
               
chr18:17670078-17669870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
158-509
               

               
Cow position:
               
chr18:7952373-7952718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
129, 98
               

               
Conread position:
               
160-376
               

               
Cow position:
               
chr18:34818048-34818264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
204, 193
               

               
Conread position:
               
160-524
               

               
Cow position:
               
chr18:42432361-42431995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
167-561
               

               
Cow position:
               
chr18:21103031-21102640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
132, 20
               

               
Conread position:
               
170-513
               

               
Cow position:
               
chr18:10977469-10977126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 18
               

               
Conread position:
               
171-437
               

               
Cow position:
               
chr18:48453433-48453696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
218, 86
               

               
Conread position:
               
171-481
               

               
Cow position:
               
chr18:5578042-5578359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 248
               

               
Conread position:
               
171-528
               

               
Cow position:
               
chr18:11691672-11691309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 178
               

               
Conread position:
               
173-367
               

               
Cow position:
               
chr18:35582360-35582169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
174-368
               

               
Cow position:
               
chr18:8164297-8164103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
147, 106
               

               
Conread position:
               
174-370
               

               
Cow position:
               
chr18:23360372-23360569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
174-373
               

               
Cow position:
               
chr18:34325217-34325015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
174-382
               

               
Cow position:
               
chr18:12113624-12113428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
192, 27
               

               
Conread position:
               
174-382
               

               
Cow position:
               
chr18:36477938-36478146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
139, 104
               

               
Conread position:
               
174-460
               

               
Cow position:
               
chr18:56145420-56145701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
46, 87
               

               
Conread position:
               
174-465
               

               
Cow position:
               
chr18:32773622-32773915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
188, 22
               

               
Conread position:
               
174-469
               

               
Cow position:
               
chr18:22411874-22411571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
138, 67
               

               
Conread position:
               
174-500
               

               
Cow position:
               
chr18:50382000-50382317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
34, 74
               

               
Conread position:
               
174-502
               

               
Cow position:
               
chr18:15614105-15613786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
165, 54
               

               
Conread position:
               
174-509
               

               
Cow position:
               
chr18:10322543-10322887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
118, 180
               

               
Conread position:
               
174-509
               

               
Cow position:
               
chr18:12023890-12023557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 56
               

               
Conread position:
               
174-526
               

               
Cow position:
               
chr18:46048504-46048850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 73
               

               
Conread position:
               
174-527
               

               
Cow position:
               
chr18:20271277-20270915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
188, 77
               

               
Conread position:
               
174-527
               

               
Cow position:
               
chr18:47517466-47517106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
125, 67
               

               
Conread position:
               
174-533
               

               
Cow position:
               
chr18:54572553-54572188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
113, 46
               

               
Conread position:
               
174-538
               

               
Cow position:
               
chr18:21768370-21768723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 90
               

               
Conread position:
               
175-459
               

               
Cow position:
               
chr18:9557722-9558008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 221
               

               
Conread position:
               
176-524
               

               
Cow position:
               
chr18:46453133-46452784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 74
               

               
Conread position:
               
177-622
               

               
Cow position:
               
chr18:25647504-25647053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 68
               

               
Conread position:
               
180-460
               

               
Cow position:
               
chr18:17649987-17649707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
186, 61
               

               
Conread position:
               
181-407
               

               
Cow position:
               
chr18:5549346-5549579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
181-429
               

               
Cow position:
               
chr18:5783357-5783115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
5, 16
               

               
Conread position:
               
181-513
               

               
Cow position:
               
chr18:47828570-47828903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
182-364
               

               
Cow position:
               
chr18:52864565-52864381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
182-471
               

               
Cow position:
               
chr18:43806202-43806494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
105, 72
               

               
Conread position:
               
183-373
               

               
Cow position:
               
chr18:26335064-26334875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
106, 59
               

               
Conread position:
               
183-465
               

               
Cow position:
               
chr18:32883053-32883340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 255
               

               
Conread position:
               
183-531
               

               
Cow position:
               
chr18:55498814-55499170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
113, 80
               

               
Conread position:
               
187-520
               

               
Cow position:
               
chr18:2864243-2863898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
108, 43
               

               
Conread position:
               
190-336
               

               
Cow position:
               
chr18:2354653-2354801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
190-471
               

               
Cow position:
               
chr18:3018320-3018044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
230, 70
               

               
Conread position:
               
190-537
               

               
Cow position:
               
chr18:17391215-17390889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
193-360
               

               
Cow position:
               
chr18:9806172-9806342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
193-375
               

               
Cow position:
               
chr18:34021152-34021325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
193-415
               

               
Cow position:
               
chr18:16462232-16462009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
193-512
               

               
Cow position:
               
chr18:18592234-18592557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 98
               

               
Conread position:
               
194-624
               

               
Cow position:
               
chr18:33007819-33008251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 269
               

               
Conread position:
               
195-518
               

               
Cow position:
               
chr18:48713317-48713641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 44
               

               
Conread position:
               
196-427
               

               
Cow position:
               
chr18:2480415-2480656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
92, 59
               

               
Conread position:
               
196-428
               

               
Cow position:
               
chr18:47722381-47722614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
91, 174
               

               
Conread position:
               
196-550
               

               
Cow position:
               
chr18:48829022-48828649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
47, 186
               

               
Conread position:
               
197-321
               

               
Cow position:
               
chr18:33882892-33882770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
197-365
               

               
Cow position:
               
chr18:15340674-15340516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
146, 33
               

               
Conread position:
               
197-451
               

               
Cow position:
               
chr18:895793-896052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
147, 72
               

               
Conread position:
               
197-464
               

               
Cow position:
               
chr18:24856079-24855808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
164, 50
               

               
Conread position:
               
197-469
               

               
Cow position:
               
chr18:25984807-25984531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
164, 40
               

               
Conread position:
               
197-553
               

               
Cow position:
               
chr18:43020624-43020279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
172, 60
               

               
Conread position:
               
198-513
               

               
Cow position:
               
chr18:42479825-42479501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 230
               

               
Conread position:
               
198-533
               

               
Cow position:
               
chr18:33896656-33896311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 43
               

               
Conread position:
               
199-373
               

               
Cow position:
               
chr18:28823201-28823029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
99, 42
               

               
Conread position:
               
199-376
               

               
Cow position:
               
chr18:219100-219275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
93, 36
               

               
Conread position:
               
199-376
               

               
Cow position:
               
chr18:35777726-35777897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
88, 44
               

               
Conread position:
               
201-531
               

               
Cow position:
               
chr18:42431835-42431509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
168, 40
               

               
Conread position:
               
203-548
               

               
Cow position:
               
chr18:51392874-51392523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
91, 135
               

               
Conread position:
               
206-348
               

               
Cow position:
               
chr18:306289-306153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
206-376
               

               
Cow position:
               
chr18:1582508-1582338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
80, 120
               

               
Conread position:
               
208-383
               

               
Cow position:
               
chr18:14085238-14085406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
84, 22
               

               
Conread position:
               
209-469
               

               
Cow position:
               
chr18:52583773-52584029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
132, 45
               

               
Conread position:
               
210-570
               

               
Cow position:
               
chr18:39434602-39434967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
86, 74
               

               
Conread position:
               
211-377
               

               
Cow position:
               
chr18:16847469-16847635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
212-451
               

               
Cow position:
               
chr18:47812249-47812492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
8, 26
               

               
Conread position:
               
214-443
               

               
Cow position:
               
chr18:54056341-54056564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
156, 44
               

               
Conread position:
               
216-511
               

               
Cow position:
               
chr18:30341394-30341104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
80, 6
               

               
Conread position:
               
219-539
               

               
Cow position:
               
chr18:1954806-1954478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 119
               

               
Conread position:
               
221-526
               

               
Cow position:
               
chr18:3211658-3211977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
65, 23
               

               
Conread position:
               
222-668
               

               
Cow position:
               
chr18:36230931-36230490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 23
               

               
Conread position:
               
223-348
               

               
Cow position:
               
chr18:15677427-15677553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
225-531
               

               
Cow position:
               
chr18:1399562-1399252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
148, 186
               

               
Conread position:
               
226-361
               

               
Cow position:
               
chr18:1594149-1594014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
129, 69
               

               
Conread position:
               
226-471
               

               
Cow position:
               
chr18:179236-178998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
65, 31
               

               
Conread position:
               
229-524
               

               
Cow position:
               
chr18:48451846-48452164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
59, 191
               

               
Conread position:
               
231-372
               

               
Cow position:
               
chr18:15810110-15809975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
231-456
               

               
Cow position:
               
chr18:7415233-7415004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
65, 180
               

               
Conread position:
               
231-535
               

               
Cow position:
               
chr18:39623594-39623904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
58, 76
               

               
Conread position:
               
232-482
               

               
Cow position:
               
chr18:3193501-3193758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
130, 192
               

               
Conread position:
               
232-502
               

               
Cow position:
               
chr18:18369566-18369288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
137, 202
               

               
Conread position:
               
232-531
               

               
Cow position:
               
chr18:7108922-7109231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
23, 201
               

               
Conread position:
               
234-469
               

               
Cow position:
               
chr18:55806833-55806593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
65, 21
               

               
Conread position:
               
236-368
               

               
Cow position:
               
chr18:35419611-35419743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
237-372
               

               
Cow position:
               
chr18:18815875-18815736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
237-508
               

               
Cow position:
               
chr18:52877181-52877442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
259, 104
               

               
Conread position:
               
238-348
               

               
Cow position:
               
chr18:4529315-4529423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
240-425
               

               
Cow position:
               
chr18:5072606-5072425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
160, 21
               

               
Conread position:
               
240-561
               

               
Cow position:
               
chr18:19896651-19896318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
52, 208
               

               
Conread position:
               
241-515
               

               
Cow position:
               
chr18:41005262-41004993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
46, 139
               

               
Conread position:
               
243-341
               

               
Cow position:
               
chr18:47963483-47963582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
244-513
               

               
Cow position:
               
chr18:8299822-8300102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
65, 185
               

               
Conread position:
               
245-471
               

               
Cow position:
               
chr18:5766225-5766451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
247-509
               

               
Cow position:
               
chr18:8171272-8171006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
126, 12
               

               
Conread position:
               
248-566
               

               
Cow position:
               
chr18:51190778-51190461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 77
               

               
Conread position:
               
249-411
               

               
Cow position:
               
chr18:4602196-4602029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
120, 35
               

               
Conread position:
               
249-512
               

               
Cow position:
               
chr18:16686523-16686251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
120, 176
               

               
Conread position:
               
251-533
               

               
Cow position:
               
chr18:47835642-47835927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 98
               

               
Conread position:
               
253-550
               

               
Cow position:
               
chr18:36201808-36201507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
111, 46
               

               
Conread position:
               
255-499
               

               
Cow position:
               
chr18:21740990-21740744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
99, 95
               

               
Conread position:
               
255-500
               

               
Cow position:
               
chr18:28930810-28930564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
38, 79
               

               
Conread position:
               
256-496
               

               
Cow position:
               
chr18:43555704-43555457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
112, 165
               

               
Conread position:
               
256-561
               

               
Cow position:
               
chr18:7076773-7077087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
32, 7
               

               
Conread position:
               
259-465
               

               
Cow position:
               
chr18:40268869-40268664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
32, 113
               

               
Conread position:
               
266-538
               

               
Cow position:
               
chr18:48633623-48633883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
95, 62
               

               
Conread position:
               
274-503
               

               
Cow position:
               
chr18:11577927-11578149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
221, 63
               

               
Conread position:
               
278-484
               

               
Cow position:
               
chr18:52642271-52642067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 70
               

               
Conread position:
               
278-500
               

               
Cow position:
               
chr18:20462851-20462622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 30
               

               
Conread position:
               
282-461
               

               
Cow position:
               
chr18:50095547-50095367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 52
               

               
Conread position:
               
284-512
               

               
Cow position:
               
chr18:1571388-1571153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
81, 147
               

               
Conread position:
               
284-529
               

               
Cow position:
               
chr18:46135591-46135841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
77, 61
               

               
Conread position:
               
285-511
               

               
Cow position:
               
chr18:7963294-7963510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
83, 48
               

               
Conread position:
               
285-511
               

               
Cow position:
               
chr18:16378794-16379006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
210, 65
               

               
Conread position:
               
285-512
               

               
Cow position:
               
chr18:36768955-36768727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
76, 137
               

               
Conread position:
               
285-512
               

               
Cow position:
               
chr18:51594952-51594720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
84, 38
               

               
Conread position:
               
286-536
               

               
Cow position:
               
chr18:34220070-34219806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
288-513
               

               
Cow position:
               
chr18:23630746-23630521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
289-501
               

               
Cow position:
               
chr18:54130480-54130257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 137
               

               
Conread position:
               
297-505
               

               
Cow position:
               
chr18:42751750-42751526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 181
               

               
Conread position:
               
299-505
               

               
Cow position:
               
chr18:25006625-25006416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
60, 123
               

               
Conread position:
               
299-535
               

               
Cow position:
               
chr18:49841142-49841384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
70, 131
               

               
Conread position:
               
307-520
               

               
Cow position:
               
chr18:4490024-4489816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
189, 40
               

               
Conread position:
               
307-533
               

               
Cow position:
               
chr18:34834362-34834596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
32, 108
               

               
Conread position:
               
308-526
               

               
Cow position:
               
chr18:49038334-49038556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
314-612
               

               
Cow position:
               
chr18:47967045-47966731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
47, 105
               

               
Conread position:
               
322-545
               

               
Cow position:
               
chr18:4535129-4534906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
59, 45
               

               
Conread position:
               
324-499
               

               
Cow position:
               
chr18:43797065-43796885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 101
               

               
Conread position:
               
330-509
               

               
Cow position:
               
chr18:35367292-35367114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
37, 92
               

               
Conread position:
               
331-629
               

               
Cow position:
               
chr18:49324528-49324229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
164, 39
               

               
Conread position:
               
351-505
               

               
Cow position:
               
chr18:49981514-49981362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
144, 6
               

               
Conread position:
               
364-531
               

               
Cow position:
               
chr18:47705172-47705334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
364-545
               

               
Cow position:
               
chr18:53038767-53038949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
117, 51
               

               
Conread position:
               
366-548
               

               
Cow position:
               
chr18:23505270-23505452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
130, 61
               

               
Conread position:
               
367-627
               

               
Cow position:
               
chr18:21081951-21081709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
253, 68
               

               
Conread position:
               
369-547
               

               
Cow position:
               
chr18:44917699-44917875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
169, 49
               

               
Conread position:
               
370-539
               

               
Cow position:
               
chr18:52649404-52649239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
370-622
               

               
Cow position:
               
chr18:9176846-9177091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
123, 46
               

               
Conread position:
               
379-524
               

               
Cow position:
               
chr18:50632490-50632347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               
Show alignments to all cow chromosomes.