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Cow genome map

           
Conread name:
           
Mixn-0015i14
        

               
Conread position:
               
2-348
               

               
Cow position:
               
chr19:18695522-18695175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
141, 18
               

               
Conread position:
               
2-415
               

               
Cow position:
               
chr19:2249560-2249145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
150, 18
               

               
Conread position:
               
2-415
               

               
Cow position:
               
chr19:4279359-4279775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 18
               

               
Conread position:
               
2-415
               

               
Cow position:
               
chr19:39924260-39924673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 18
               

               
Conread position:
               
2-428
               

               
Cow position:
               
chr19:50177422-50177847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 18
               

               
Conread position:
               
2-471
               

               
Cow position:
               
chr19:51267500-51267948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 23
               

               
Conread position:
               
2-512
               

               
Cow position:
               
chr19:27612588-27612063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 18
               

               
Conread position:
               
3-351
               

               
Cow position:
               
chr19:3249449-3249099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
3-354
               

               
Cow position:
               
chr19:35311044-35310705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
124, 17
               

               
Conread position:
               
3-366
               

               
Cow position:
               
chr19:8496707-8496344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 17
               

               
Conread position:
               
3-373
               

               
Cow position:
               
chr19:345317-345698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 13
               

               
Conread position:
               
3-386
               

               
Cow position:
               
chr19:22778797-22779179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 109
               

               
Conread position:
               
3-420
               

               
Cow position:
               
chr19:12233745-12234166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 17
               

               
Conread position:
               
3-502
               

               
Cow position:
               
chr19:20671311-20670810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
3-502
               

               
Cow position:
               
chr19:39751070-39751572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 17
               

               
Conread position:
               
3-509
               

               
Cow position:
               
chr19:39576976-39576465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 17
               

               
Conread position:
               
3-526
               

               
Cow position:
               
chr19:6688412-6687884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 20
               

               
Conread position:
               
3-623
               

               
Cow position:
               
chr19:2589109-2589703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 17
               

               
Conread position:
               
4-510
               

               
Cow position:
               
chr19:35539899-35540403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 41
               

               
Conread position:
               
4-637
               

               
Cow position:
               
chr19:43703100-43702486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 16
               

               
Conread position:
               
5-334
               

               
Cow position:
               
chr19:19499957-19499633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 15
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr19:13635634-13635973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
147, 15
               

               
Conread position:
               
5-366
               

               
Cow position:
               
chr19:33932548-33932196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 11
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr19:46918437-46918871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 15
               

               
Conread position:
               
5-431
               

               
Cow position:
               
chr19:32450659-32451111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 15
               

               
Conread position:
               
5-451
               

               
Cow position:
               
chr19:28014076-28014523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 19
               

               
Conread position:
               
5-451
               

               
Cow position:
               
chr19:37647245-37646792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 15
               

               
Conread position:
               
5-460
               

               
Cow position:
               
chr19:38842949-38842506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 12
               

               
Conread position:
               
5-462
               

               
Cow position:
               
chr19:36221531-36221989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
137, 15
               

               
Conread position:
               
5-469
               

               
Cow position:
               
chr19:42240694-42240233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 15
               

               
Conread position:
               
5-471
               

               
Cow position:
               
chr19:4446022-4445557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 15
               

               
Conread position:
               
5-506
               

               
Cow position:
               
chr19:55968092-55967602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
365, 15
               

               
Conread position:
               
5-512
               

               
Cow position:
               
chr19:18786729-18786216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 15
               

               
Conread position:
               
5-512
               

               
Cow position:
               
chr19:23222239-23222736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
360, 25
               

               
Conread position:
               
5-516
               

               
Cow position:
               
chr19:22765213-22765731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 15
               

               
Conread position:
               
5-518
               

               
Cow position:
               
chr19:33033857-33033327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 15
               

               
Conread position:
               
5-539
               

               
Cow position:
               
chr19:21198721-21199272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
5-659
               

               
Cow position:
               
chr19:17795490-17796129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 10
               

               
Conread position:
               
8-327
               

               
Cow position:
               
chr19:53463570-53463252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 12
               

               
Conread position:
               
8-340
               

               
Cow position:
               
chr19:24956830-24956518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 22
               

               
Conread position:
               
8-375
               

               
Cow position:
               
chr19:4448139-4448502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 12
               

               
Conread position:
               
8-376
               

               
Cow position:
               
chr19:56382747-56383100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 15
               

               
Conread position:
               
8-388
               

               
Cow position:
               
chr19:31873705-31874087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 12
               

               
Conread position:
               
8-411
               

               
Cow position:
               
chr19:36176338-36176755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 12
               

               
Conread position:
               
8-417
               

               
Cow position:
               
chr19:25086124-25086534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 12
               

               
Conread position:
               
8-428
               

               
Cow position:
               
chr19:23785788-23786217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 12
               

               
Conread position:
               
8-459
               

               
Cow position:
               
chr19:39661944-39661490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 16
               

               
Conread position:
               
8-512
               

               
Cow position:
               
chr19:34956098-34955593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 12
               

               
Conread position:
               
8-513
               

               
Cow position:
               
chr19:43440772-43441275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
349, 103
               

               
Conread position:
               
8-524
               

               
Cow position:
               
chr19:24061896-24062395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 12
               

               
Conread position:
               
8-525
               

               
Cow position:
               
chr19:7637623-7637117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 12
               

               
Conread position:
               
8-531
               

               
Cow position:
               
chr19:56150459-56149940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 12
               

               
Conread position:
               
8-532
               

               
Cow position:
               
chr19:39056843-39057371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 12
               

               
Conread position:
               
8-533
               

               
Cow position:
               
chr19:14253233-14253757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 12
               

               
Conread position:
               
8-533
               

               
Cow position:
               
chr19:14473179-14472656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 15
               

               
Conread position:
               
8-542
               

               
Cow position:
               
chr19:29627769-29627259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
8-543
               

               
Cow position:
               
chr19:35018647-35018108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 12
               

               
Conread position:
               
8-616
               

               
Cow position:
               
chr19:27348662-27348086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 27
               

               
Conread position:
               
9-348
               

               
Cow position:
               
chr19:25054073-25053738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 85
               

               
Conread position:
               
9-392
               

               
Cow position:
               
chr19:25637893-25637515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
136, 88
               

               
Conread position:
               
9-417
               

               
Cow position:
               
chr19:38392398-38392817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 11
               

               
Conread position:
               
9-462
               

               
Cow position:
               
chr19:35380946-35380497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 11
               

               
Conread position:
               
9-474
               

               
Cow position:
               
chr19:47109630-47110108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 75
               

               
Conread position:
               
9-501
               

               
Cow position:
               
chr19:30232344-30232805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 11
               

               
Conread position:
               
9-510
               

               
Cow position:
               
chr19:15068394-15067903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 14
               

               
Conread position:
               
9-512
               

               
Cow position:
               
chr19:8375700-8375196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 14
               

               
Conread position:
               
9-618
               

               
Cow position:
               
chr19:8033338-8033972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 11
               

               
Conread position:
               
10-373
               

               
Cow position:
               
chr19:36977315-36976954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 7
               

               
Conread position:
               
10-461
               

               
Cow position:
               
chr19:31396290-31395843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 7
               

               
Conread position:
               
10-475
               

               
Cow position:
               
chr19:25999236-25999686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 20
               

               
Conread position:
               
10-509
               

               
Cow position:
               
chr19:5185653-5185152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 10
               

               
Conread position:
               
11-367
               

               
Cow position:
               
chr19:8839199-8839556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 6
               

               
Conread position:
               
11-368
               

               
Cow position:
               
chr19:3084599-3084254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
138, 6
               

               
Conread position:
               
11-428
               

               
Cow position:
               
chr19:14929072-14928633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 7
               

               
Conread position:
               
11-437
               

               
Cow position:
               
chr19:47727968-47727541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 150
               

               
Conread position:
               
11-464
               

               
Cow position:
               
chr19:42205532-42205983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 9
               

               
Conread position:
               
11-470
               

               
Cow position:
               
chr19:31825424-31824950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 19
               

               
Conread position:
               
11-471
               

               
Cow position:
               
chr19:21380316-21379877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 6
               

               
Conread position:
               
11-496
               

               
Cow position:
               
chr19:36125189-36125675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 9
               

               
Conread position:
               
11-501
               

               
Cow position:
               
chr19:5656509-5656029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 7
               

               
Conread position:
               
12-342
               

               
Cow position:
               
chr19:55210875-55210538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
120, 184
               

               
Conread position:
               
12-365
               

               
Cow position:
               
chr19:42725955-42726310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 163
               

               
Conread position:
               
12-367
               

               
Cow position:
               
chr19:48409118-48409464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 54
               

               
Conread position:
               
12-429
               

               
Cow position:
               
chr19:3246433-3246026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 177
               

               
Conread position:
               
12-512
               

               
Cow position:
               
chr19:24358624-24358140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 8
               

               
Conread position:
               
19-367
               

               
Cow position:
               
chr19:35621976-35622312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
128, 65
               

               
Conread position:
               
19-514
               

               
Cow position:
               
chr19:16566767-16567259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 162
               

               
Conread position:
               
20-372
               

               
Cow position:
               
chr19:2771402-2771054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
116, 150
               

               
Conread position:
               
20-390
               

               
Cow position:
               
chr19:29367469-29367826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
267, 129
               

               
Conread position:
               
20-413
               

               
Cow position:
               
chr19:30540452-30540058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 169
               

               
Conread position:
               
20-511
               

               
Cow position:
               
chr19:9582915-9583393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
105, 87
               

               
Conread position:
               
20-522
               

               
Cow position:
               
chr19:44839284-44838821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 68
               

               
Conread position:
               
20-533
               

               
Cow position:
               
chr19:20661808-20661286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 168
               

               
Conread position:
               
25-474
               

               
Cow position:
               
chr19:2734066-2734517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 117
               

               
Conread position:
               
26-377
               

               
Cow position:
               
chr19:18788486-18788141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 160
               

               
Conread position:
               
26-426
               

               
Cow position:
               
chr19:46822058-46822477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 63
               

               
Conread position:
               
26-562
               

               
Cow position:
               
chr19:12697942-12698475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 101
               

               
Conread position:
               
26-618
               

               
Cow position:
               
chr19:7612245-7612832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 18
               

               
Conread position:
               
27-387
               

               
Cow position:
               
chr19:46181193-46180842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 76
               

               
Conread position:
               
29-531
               

               
Cow position:
               
chr19:730112-729623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
114, 144
               

               
Conread position:
               
31-474
               

               
Cow position:
               
chr19:17274095-17273673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 15
               

               
Conread position:
               
34-383
               

               
Cow position:
               
chr19:7136586-7136935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
118, 43
               

               
Conread position:
               
37-618
               

               
Cow position:
               
chr19:34620405-34619816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 55
               

               
Conread position:
               
39-376
               

               
Cow position:
               
chr19:1504774-1505089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
94, 131
               

               
Conread position:
               
40-612
               

               
Cow position:
               
chr19:25696576-25696029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 137
               

               
Conread position:
               
41-376
               

               
Cow position:
               
chr19:11171587-11171256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
106, 9
               

               
Conread position:
               
43-417
               

               
Cow position:
               
chr19:20693116-20693512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 137
               

               
Conread position:
               
45-367
               

               
Cow position:
               
chr19:25025851-25025541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
102, 71
               

               
Conread position:
               
46-413
               

               
Cow position:
               
chr19:8212207-8211838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 217
               

               
Conread position:
               
51-535
               

               
Cow position:
               
chr19:25727238-25726751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 123
               

               
Conread position:
               
54-393
               

               
Cow position:
               
chr19:11232284-11231941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
90, 109
               

               
Conread position:
               
54-510
               

               
Cow position:
               
chr19:15863400-15862946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 116
               

               
Conread position:
               
54-512
               

               
Cow position:
               
chr19:56063785-56063323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
65, 51
               

               
Conread position:
               
55-358
               

               
Cow position:
               
chr19:7978914-7978615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 118
               

               
Conread position:
               
55-471
               

               
Cow position:
               
chr19:39245544-39245964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 118
               

               
Conread position:
               
56-368
               

               
Cow position:
               
chr19:35416321-35416010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
77, 106
               

               
Conread position:
               
57-348
               

               
Cow position:
               
chr19:40875729-40875430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 147
               

               
Conread position:
               
58-415
               

               
Cow position:
               
chr19:24801917-24801558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
80, 114
               

               
Conread position:
               
58-474
               

               
Cow position:
               
chr19:38340324-38339917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 67
               

               
Conread position:
               
58-511
               

               
Cow position:
               
chr19:43058179-43058632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 25
               

               
Conread position:
               
58-515
               

               
Cow position:
               
chr19:14592701-14593165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 67
               

               
Conread position:
               
59-390
               

               
Cow position:
               
chr19:15499160-15499492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
84, 130
               

               
Conread position:
               
61-496
               

               
Cow position:
               
chr19:31594949-31595390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 112
               

               
Conread position:
               
61-532
               

               
Cow position:
               
chr19:6515911-6516392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 105
               

               
Conread position:
               
62-387
               

               
Cow position:
               
chr19:2138451-2138130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
90, 38
               

               
Conread position:
               
63-348
               

               
Cow position:
               
chr19:23005713-23005426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 110
               

               
Conread position:
               
66-358
               

               
Cow position:
               
chr19:56043181-56043476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
154, 85
               

               
Conread position:
               
67-348
               

               
Cow position:
               
chr19:22513498-22513780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
76, 8
               

               
Conread position:
               
67-520
               

               
Cow position:
               
chr19:46454506-46454962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 8
               

               
Conread position:
               
71-354
               

               
Cow position:
               
chr19:43358290-43358010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
76, 95
               

               
Conread position:
               
74-348
               

               
Cow position:
               
chr19:29755243-29754972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
75-378
               

               
Cow position:
               
chr19:52773512-52773215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 98
               

               
Conread position:
               
79-373
               

               
Cow position:
               
chr19:28921500-28921783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
234, 13
               

               
Conread position:
               
79-502
               

               
Cow position:
               
chr19:30533610-30534024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 93
               

               
Conread position:
               
79-512
               

               
Cow position:
               
chr19:12601480-12601908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
68, 94
               

               
Conread position:
               
82-372
               

               
Cow position:
               
chr19:32955561-32955846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
83-548
               

               
Cow position:
               
chr19:4588048-4587600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 93
               

               
Conread position:
               
87-357
               

               
Cow position:
               
chr19:23340712-23340980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
60, 33
               

               
Conread position:
               
88-471
               

               
Cow position:
               
chr19:33912955-33912560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
89-322
               

               
Cow position:
               
chr19:12019135-12019360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
54, 77
               

               
Conread position:
               
89-509
               

               
Cow position:
               
chr19:7668382-7668796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
52, 35
               

               
Conread position:
               
90-381
               

               
Cow position:
               
chr19:11066129-11065839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
53, 75
               

               
Conread position:
               
94-460
               

               
Cow position:
               
chr19:26086876-26087248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
7, 160
               

               
Conread position:
               
96-414
               

               
Cow position:
               
chr19:21216968-21217288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
56, 102
               

               
Conread position:
               
98-512
               

               
Cow position:
               
chr19:6417287-6417715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
47, 68
               

               
Conread position:
               
104-521
               

               
Cow position:
               
chr19:9542204-9541786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
104-629
               

               
Cow position:
               
chr19:35741850-35742382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 62
               

               
Conread position:
               
105-429
               

               
Cow position:
               
chr19:12327701-12327366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
39, 106
               

               
Conread position:
               
105-551
               

               
Cow position:
               
chr19:16694351-16693889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
25, 59
               

               
Conread position:
               
106-367
               

               
Cow position:
               
chr19:44397198-44397457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
106-513
               

               
Cow position:
               
chr19:40051690-40051286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
29, 67
               

               
Conread position:
               
107-607
               

               
Cow position:
               
chr19:48474840-48475336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
110-358
               

               
Cow position:
               
chr19:53037451-53037208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 53
               

               
Conread position:
               
110-362
               

               
Cow position:
               
chr19:30925616-30925373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
24, 54
               

               
Conread position:
               
115-368
               

               
Cow position:
               
chr19:6966691-6966437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
37, 234
               

               
Conread position:
               
116-368
               

               
Cow position:
               
chr19:4252267-4252017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
27, 57
               

               
Conread position:
               
116-536
               

               
Cow position:
               
chr19:6610296-6609864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
36, 321
               

               
Conread position:
               
119-465
               

               
Cow position:
               
chr19:28451113-28451447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
23, 54
               

               
Conread position:
               
125-466
               

               
Cow position:
               
chr19:17664355-17664699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 30
               

               
Conread position:
               
127-407
               

               
Cow position:
               
chr19:1933730-1933449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
127-537
               

               
Cow position:
               
chr19:15887603-15887193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 35
               

               
Conread position:
               
129-365
               

               
Cow position:
               
chr19:39794679-39794916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
129-460
               

               
Cow position:
               
chr19:33468747-33469074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 39
               

               
Conread position:
               
130-524
               

               
Cow position:
               
chr19:29368124-29368514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 9
               

               
Conread position:
               
131-469
               

               
Cow position:
               
chr19:9387358-9387696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
132-375
               

               
Cow position:
               
chr19:1898506-1898273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 37
               

               
Conread position:
               
132-376
               

               
Cow position:
               
chr19:19661767-19662008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
133-373
               

               
Cow position:
               
chr19:990683-990462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
8, 28
               

               
Conread position:
               
133-511
               

               
Cow position:
               
chr19:14347738-14348116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 6
               

               
Conread position:
               
136-386
               

               
Cow position:
               
chr19:419607-419862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
105, 32
               

               
Conread position:
               
138-373
               

               
Cow position:
               
chr19:10093027-10093254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
150, 22
               

               
Conread position:
               
138-428
               

               
Cow position:
               
chr19:1968572-1968282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
229, 22
               

               
Conread position:
               
139-466
               

               
Cow position:
               
chr19:38638068-38637759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
139-511
               

               
Cow position:
               
chr19:48722759-48723125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 18
               

               
Conread position:
               
139-541
               

               
Cow position:
               
chr19:21378733-21378338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 22
               

               
Conread position:
               
139-585
               

               
Cow position:
               
chr19:51185160-51185597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
250, 7
               

               
Conread position:
               
143-334
               

               
Cow position:
               
chr19:7492177-7492355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
145-364
               

               
Cow position:
               
chr19:4537673-4537466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
151, 16
               

               
Conread position:
               
145-366
               

               
Cow position:
               
chr19:12154588-12154802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
142, 23
               

               
Conread position:
               
145-376
               

               
Cow position:
               
chr19:25572185-25572410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
156, 15
               

               
Conread position:
               
145-376
               

               
Cow position:
               
chr19:39777431-39777201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
142, 15
               

               
Conread position:
               
145-382
               

               
Cow position:
               
chr19:904722-904946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
39, 44
               

               
Conread position:
               
145-459
               

               
Cow position:
               
chr19:33823056-33823371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 23
               

               
Conread position:
               
145-463
               

               
Cow position:
               
chr19:50646846-50646538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 15
               

               
Conread position:
               
145-464
               

               
Cow position:
               
chr19:24144757-24145075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 25
               

               
Conread position:
               
145-471
               

               
Cow position:
               
chr19:11376666-11376339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 23
               

               
Conread position:
               
145-474
               

               
Cow position:
               
chr19:52381271-52381589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
221, 15
               

               
Conread position:
               
145-505
               

               
Cow position:
               
chr19:6049922-6049577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
221, 15
               

               
Conread position:
               
145-511
               

               
Cow position:
               
chr19:36844988-36845352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
133, 15
               

               
Conread position:
               
145-511
               

               
Cow position:
               
chr19:42694727-42695098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
118, 15
               

               
Conread position:
               
145-511
               

               
Cow position:
               
chr19:47671491-47671849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 25
               

               
Conread position:
               
145-512
               

               
Cow position:
               
chr19:3812276-3811913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
228, 15
               

               
Conread position:
               
145-522
               

               
Cow position:
               
chr19:8332034-8332415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 16
               

               
Conread position:
               
145-524
               

               
Cow position:
               
chr19:10213410-10213787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 15
               

               
Conread position:
               
145-537
               

               
Cow position:
               
chr19:39360879-39361275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
142, 23
               

               
Conread position:
               
145-622
               

               
Cow position:
               
chr19:36059671-36060141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 15
               

               
Conread position:
               
146-463
               

               
Cow position:
               
chr19:17479220-17478903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
207, 14
               

               
Conread position:
               
146-524
               

               
Cow position:
               
chr19:3621168-3621547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 15
               

               
Conread position:
               
147-376
               

               
Cow position:
               
chr19:41212311-41212086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
150, 13
               

               
Conread position:
               
147-494
               

               
Cow position:
               
chr19:5116126-5115792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
148-531
               

               
Cow position:
               
chr19:10186242-10186629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 12
               

               
Conread position:
               
152-458
               

               
Cow position:
               
chr19:9209248-9209553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
152-524
               

               
Cow position:
               
chr19:11191880-11191502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 279
               

               
Conread position:
               
153-466
               

               
Cow position:
               
chr19:20935499-20935813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
208, 26
               

               
Conread position:
               
171-376
               

               
Cow position:
               
chr19:2349496-2349291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
121, 74
               

               
Conread position:
               
171-524
               

               
Cow position:
               
chr19:11758840-11758510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
326, 48
               

               
Conread position:
               
171-524
               

               
Cow position:
               
chr19:53791669-53791312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
121, 254
               

               
Conread position:
               
172-447
               

               
Cow position:
               
chr19:32754276-32754567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
172-524
               

               
Cow position:
               
chr19:29625666-29626019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 71
               

               
Conread position:
               
172-530
               

               
Cow position:
               
chr19:25653000-25652635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 187
               

               
Conread position:
               
173-432
               

               
Cow position:
               
chr19:34911648-34911904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
173-545
               

               
Cow position:
               
chr19:30471574-30471214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
172, 55
               

               
Conread position:
               
174-327
               

               
Cow position:
               
chr19:33882396-33882247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
174-365
               

               
Cow position:
               
chr19:31762788-31762980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
174-376
               

               
Cow position:
               
chr19:44489856-44490058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
139, 30
               

               
Conread position:
               
174-428
               

               
Cow position:
               
chr19:15766976-15767226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
193, 56
               

               
Conread position:
               
174-428
               

               
Cow position:
               
chr19:47187288-47187032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
125, 73
               

               
Conread position:
               
174-456
               

               
Cow position:
               
chr19:10706046-10706323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 163
               

               
Conread position:
               
174-459
               

               
Cow position:
               
chr19:11534453-11534725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
226, 22
               

               
Conread position:
               
174-460
               

               
Cow position:
               
chr19:10964836-10964543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
114, 230
               

               
Conread position:
               
174-462
               

               
Cow position:
               
chr19:433363-433074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
171, 17
               

               
Conread position:
               
174-474
               

               
Cow position:
               
chr19:1152986-1153273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
226, 67
               

               
Conread position:
               
174-474
               

               
Cow position:
               
chr19:19919697-19919394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 26
               

               
Conread position:
               
174-508
               

               
Cow position:
               
chr19:6531655-6531988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 67
               

               
Conread position:
               
174-512
               

               
Cow position:
               
chr19:41584739-41585073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 56
               

               
Conread position:
               
174-513
               

               
Cow position:
               
chr19:21363679-21363330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 156
               

               
Conread position:
               
174-522
               

               
Cow position:
               
chr19:41945953-41946299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 73
               

               
Conread position:
               
174-533
               

               
Cow position:
               
chr19:13129646-13129995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 44
               

               
Conread position:
               
174-547
               

               
Cow position:
               
chr19:21065540-21065905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
185, 65
               

               
Conread position:
               
174-553
               

               
Cow position:
               
chr19:21335852-21335450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 179
               

               
Conread position:
               
175-373
               

               
Cow position:
               
chr19:33306069-33306268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
175-513
               

               
Cow position:
               
chr19:4502985-4503327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
154, 80
               

               
Conread position:
               
175-531
               

               
Cow position:
               
chr19:5913185-5912835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
124, 72
               

               
Conread position:
               
176-373
               

               
Cow position:
               
chr19:36380011-36380203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
180-368
               

               
Cow position:
               
chr19:23244750-23244566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
180-524
               

               
Cow position:
               
chr19:10545938-10545587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 18
               

               
Conread position:
               
180-533
               

               
Cow position:
               
chr19:25382935-25382560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
116, 261
               

               
Conread position:
               
182-531
               

               
Cow position:
               
chr19:35762484-35762125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 165
               

               
Conread position:
               
183-358
               

               
Cow position:
               
chr19:25835583-25835408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
156, 58
               

               
Conread position:
               
185-348
               

               
Cow position:
               
chr19:40832025-40832190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
92, 11
               

               
Conread position:
               
185-415
               

               
Cow position:
               
chr19:8683088-8683318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
185-460
               

               
Cow position:
               
chr19:7158958-7158667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
86, 253
               

               
Conread position:
               
189-457
               

               
Cow position:
               
chr19:24137037-24137313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 241
               

               
Conread position:
               
190-414
               

               
Cow position:
               
chr19:37423496-37423266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
104, 57
               

               
Conread position:
               
190-510
               

               
Cow position:
               
chr19:33903642-33903323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
180, 37
               

               
Conread position:
               
190-512
               

               
Cow position:
               
chr19:34000990-34001313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 14
               

               
Conread position:
               
190-524
               

               
Cow position:
               
chr19:11565371-11565036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 88
               

               
Conread position:
               
190-531
               

               
Cow position:
               
chr19:43035022-43035365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
99, 51
               

               
Conread position:
               
190-533
               

               
Cow position:
               
chr19:8864529-8864865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
109, 51
               

               
Conread position:
               
191-460
               

               
Cow position:
               
chr19:8270826-8270547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
95, 212
               

               
Conread position:
               
192-364
               

               
Cow position:
               
chr19:1552015-1552182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 49
               

               
Conread position:
               
193-348
               

               
Cow position:
               
chr19:52136913-52136758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
193-504
               

               
Cow position:
               
chr19:42903802-42904107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
177, 49
               

               
Conread position:
               
193-511
               

               
Cow position:
               
chr19:36245703-36245389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
172, 78
               

               
Conread position:
               
193-531
               

               
Cow position:
               
chr19:51621400-51621055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
93, 48
               

               
Conread position:
               
194-372
               

               
Cow position:
               
chr19:56094324-56094495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
196-354
               

               
Cow position:
               
chr19:38502103-38501943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
197-495
               

               
Cow position:
               
chr19:3496387-3496086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
157, 122
               

               
Conread position:
               
198-524
               

               
Cow position:
               
chr19:16621567-16621239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 11
               

               
Conread position:
               
198-528
               

               
Cow position:
               
chr19:43291836-43292176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
198-534
               

               
Cow position:
               
chr19:22043555-22043228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
167, 8
               

               
Conread position:
               
198-631
               

               
Cow position:
               
chr19:20984982-20984550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 24
               

               
Conread position:
               
199-376
               

               
Cow position:
               
chr19:38724061-38723885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
34, 44
               

               
Conread position:
               
199-524
               

               
Cow position:
               
chr19:48960179-48960512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 229
               

               
Conread position:
               
200-348
               

               
Cow position:
               
chr19:51334457-51334610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
200-365
               

               
Cow position:
               
chr19:51285416-51285585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
22, 147
               

               
Conread position:
               
200-508
               

               
Cow position:
               
chr19:23784611-23784317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
165, 92
               

               
Conread position:
               
200-531
               

               
Cow position:
               
chr19:25673729-25673402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
89, 51
               

               
Conread position:
               
201-372
               

               
Cow position:
               
chr19:25769452-25769622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
201-514
               

               
Cow position:
               
chr19:42563923-42564253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 135
               

               
Conread position:
               
206-343
               

               
Cow position:
               
chr19:2735172-2735036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
206-364
               

               
Cow position:
               
chr19:6092561-6092720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
206-367
               

               
Cow position:
               
chr19:55899446-55899284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
206-555
               

               
Cow position:
               
chr19:53840312-53840666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
90, 134
               

               
Conread position:
               
206-618
               

               
Cow position:
               
chr19:35233854-35233449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
89, 37
               

               
Conread position:
               
207-465
               

               
Cow position:
               
chr19:4329250-4328995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
168, 83
               

               
Conread position:
               
207-502
               

               
Cow position:
               
chr19:25655441-25655130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
133, 236
               

               
Conread position:
               
212-358
               

               
Cow position:
               
chr19:50298167-50298313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
213-509
               

               
Cow position:
               
chr19:2690395-2690103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 38
               

               
Conread position:
               
215-524
               

               
Cow position:
               
chr19:24760079-24759766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 8
               

               
Conread position:
               
218-354
               

               
Cow position:
               
chr19:18325481-18325347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 40
               

               
Conread position:
               
219-336
               

               
Cow position:
               
chr19:10556848-10556963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
219-471
               

               
Cow position:
               
chr19:52675299-52675049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 158
               

               
Conread position:
               
220-393
               

               
Cow position:
               
chr19:20331996-20331828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
152, 30
               

               
Conread position:
               
221-533
               

               
Cow position:
               
chr19:12747969-12747650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
75, 208
               

               
Conread position:
               
223-460
               

               
Cow position:
               
chr19:43658-43896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
146, 67
               

               
Conread position:
               
224-373
               

               
Cow position:
               
chr19:6881064-6880915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
92, 48
               

               
Conread position:
               
224-376
               

               
Cow position:
               
chr19:9531042-9531203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
224-513
               

               
Cow position:
               
chr19:6849390-6849090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 217
               

               
Conread position:
               
231-457
               

               
Cow position:
               
chr19:53086099-53086322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
188, 54
               

               
Conread position:
               
232-367
               

               
Cow position:
               
chr19:41518093-41517955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
59, 116
               

               
Conread position:
               
232-376
               

               
Cow position:
               
chr19:35457482-35457626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
137, 68
               

               
Conread position:
               
232-418
               

               
Cow position:
               
chr19:15442584-15442774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
54, 46
               

               
Conread position:
               
232-502
               

               
Cow position:
               
chr19:25628314-25628040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
112, 23
               

               
Conread position:
               
232-544
               

               
Cow position:
               
chr19:25526103-25526423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
137, 58
               

               
Conread position:
               
235-367
               

               
Cow position:
               
chr19:42070122-42069993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
236-408
               

               
Cow position:
               
chr19:10698051-10698231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
131, 53
               

               
Conread position:
               
237-391
               

               
Cow position:
               
chr19:25271593-25271436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
239-533
               

               
Cow position:
               
chr19:41497804-41497520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
241-361
               

               
Cow position:
               
chr19:11442808-11442930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
241-382
               

               
Cow position:
               
chr19:4722208-4722066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 24
               

               
Conread position:
               
241-518
               

               
Cow position:
               
chr19:47453262-47453544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
243-512
               

               
Cow position:
               
chr19:38499997-38500270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
121, 35
               

               
Conread position:
               
243-524
               

               
Cow position:
               
chr19:34287854-34288132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
125, 47
               

               
Conread position:
               
244-513
               

               
Cow position:
               
chr19:15719787-15719511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 23
               

               
Conread position:
               
245-537
               

               
Cow position:
               
chr19:55394737-55395031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
42, 179
               

               
Conread position:
               
246-511
               

               
Cow position:
               
chr19:40449847-40450123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 187
               

               
Conread position:
               
246-512
               

               
Cow position:
               
chr19:31535961-31536234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
117, 12
               

               
Conread position:
               
247-510
               

               
Cow position:
               
chr19:26976225-26975963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
114, 7
               

               
Conread position:
               
248-496
               

               
Cow position:
               
chr19:52158370-52158629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
115, 17
               

               
Conread position:
               
249-516
               

               
Cow position:
               
chr19:35107364-35107636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
115, 36
               

               
Conread position:
               
250-442
               

               
Cow position:
               
chr19:18153008-18153200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
250-531
               

               
Cow position:
               
chr19:21816798-21817088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
49, 99
               

               
Conread position:
               
251-460
               

               
Cow position:
               
chr19:9408521-9408740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 58
               

               
Conread position:
               
251-513
               

               
Cow position:
               
chr19:39385200-39384934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 69
               

               
Conread position:
               
251-558
               

               
Cow position:
               
chr19:25807465-25807155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
110, 150
               

               
Conread position:
               
251-622
               

               
Cow position:
               
chr19:4800580-4800950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
39, 19
               

               
Conread position:
               
253-535
               

               
Cow position:
               
chr19:47859476-47859189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
43, 183
               

               
Conread position:
               
254-575
               

               
Cow position:
               
chr19:43203149-43202827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
42, 161
               

               
Conread position:
               
258-469
               

               
Cow position:
               
chr19:42274003-42273788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
55, 168
               

               
Conread position:
               
258-510
               

               
Cow position:
               
chr19:39485163-39485421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
107, 170
               

               
Conread position:
               
258-541
               

               
Cow position:
               
chr19:46094795-46094505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
111, 174
               

               
Conread position:
               
258-618
               

               
Cow position:
               
chr19:7404536-7404173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
41, 175
               

               
Conread position:
               
259-615
               

               
Cow position:
               
chr19:50682594-50682247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
166, 58
               

               
Conread position:
               
260-532
               

               
Cow position:
               
chr19:18129406-18129681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
31, 163
               

               
Conread position:
               
261-513
               

               
Cow position:
               
chr19:15852795-15853034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
114, 75
               

               
Conread position:
               
265-534
               

               
Cow position:
               
chr19:30927671-30927923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
107, 63
               

               
Conread position:
               
266-500
               

               
Cow position:
               
chr19:30551880-30552111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
229, 76
               

               
Conread position:
               
268-559
               

               
Cow position:
               
chr19:31690888-31691184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 167
               

               
Conread position:
               
269-511
               

               
Cow position:
               
chr19:15092272-15092034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
81, 155
               

               
Conread position:
               
274-539
               

               
Cow position:
               
chr19:44571965-44572210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
215, 92
               

               
Conread position:
               
276-634
               

               
Cow position:
               
chr19:25035348-25035699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
94, 35
               

               
Conread position:
               
279-615
               

               
Cow position:
               
chr19:20093120-20092782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
218, 141
               

               
Conread position:
               
283-533
               

               
Cow position:
               
chr19:42517388-42517132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
87, 146
               

               
Conread position:
               
284-511
               

               
Cow position:
               
chr19:23378557-23378780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
211, 79
               

               
Conread position:
               
284-539
               

               
Cow position:
               
chr19:19489948-19489696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
289-531
               

               
Cow position:
               
chr19:23394661-23394907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
77, 28
               

               
Conread position:
               
295-508
               

               
Cow position:
               
chr19:750091-750308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 128
               

               
Conread position:
               
297-496
               

               
Cow position:
               
chr19:13757132-13757340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
69, 128
               

               
Conread position:
               
298-502
               

               
Cow position:
               
chr19:14632151-14631943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
68, 109
               

               
Conread position:
               
307-622
               

               
Cow position:
               
chr19:52711465-52711149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 24
               

               
Conread position:
               
315-513
               

               
Cow position:
               
chr19:16105181-16104975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
52, 123
               

               
Conread position:
               
319-524
               

               
Cow position:
               
chr19:18054340-18054138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
174, 50
               

               
Conread position:
               
320-531
               

               
Cow position:
               
chr19:49221710-49221500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 115
               

               
Conread position:
               
324-526
               

               
Cow position:
               
chr19:23889571-23889367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
43, 106
               

               
Conread position:
               
329-510
               

               
Cow position:
               
chr19:12052932-12052746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
329-510
               

               
Cow position:
               
chr19:12067659-12067845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
331-510
               

               
Cow position:
               
chr19:11646489-11646669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
47, 93
               

               
Conread position:
               
336-524
               

               
Cow position:
               
chr19:28810387-28810198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
350-512
               

               
Cow position:
               
chr19:25763060-25763217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
143, 18
               

               
Conread position:
               
355-502
               

               
Cow position:
               
chr19:23756792-23756646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
140, 72
               

               
Conread position:
               
362-512
               

               
Cow position:
               
chr19:42768141-42767992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 59
               

               
Conread position:
               
362-513
               

               
Cow position:
               
chr19:23087941-23088091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
133, 65
               

               
Conread position:
               
362-559
               

               
Cow position:
               
chr19:28135519-28135714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 49
               

               
Conread position:
               
365-524
               

               
Cow position:
               
chr19:38732099-38732257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
130, 62
               

               
Conread position:
               
365-531
               

               
Cow position:
               
chr19:33988028-33988191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
54, 60
               

               
Conread position:
               
370-527
               

               
Cow position:
               
chr19:10238702-10238858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
125, 50
               

               
Conread position:
               
372-622
               

               
Cow position:
               
chr19:22438613-22438872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
126, 55
               

               
Conread position:
               
456-647
               

               
Cow position:
               
chr19:22218512-22218319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 59
               
Show alignments to all cow chromosomes.