Cow genome map

Conread name: Mixn-0015i14

Conread position: 2-348
Cow position: chr20:37154080-37153733 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 18

Conread position: 2-384
Cow position: chr20:34458387-34457998 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 18

Conread position: 2-390
Cow position: chr20:11350580-11350969 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 18

Conread position: 3-355
Cow position: chr20:19845649-19846009 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 17

Conread position: 3-366
Cow position: chr20:10538969-10539323 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 248
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 149, 17

Conread position: 3-367
Cow position: chr20:27339710-27340070 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 17

Conread position: 3-373
Cow position: chr20:29633364-29632987 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 258
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 120, 40

Conread position: 3-390
Cow position: chr20:4801042-4801428 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 17

Conread position: 3-393
Cow position: chr20:20778893-20778516 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 17

Conread position: 3-397
Cow position: chr20:35889119-35888728 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 17

Conread position: 3-417
Cow position: chr20:10919668-10919254 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 283
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 144, 17

Conread position: 3-432
Cow position: chr20:28439724-28440156 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 17

Conread position: 3-438
Cow position: chr20:8112461-8112891 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 17

Conread position: 3-496
Cow position: chr20:20983672-20984135 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 374, 17

Conread position: 3-511
Cow position: chr20:398643-398148 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 17

Conread position: 3-511
Cow position: chr20:28982349-28982857 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 15

Conread position: 3-513
Cow position: chr20:19363714-19363202 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 17

Conread position: 3-522
Cow position: chr20:13269274-13269785 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 17

Conread position: 3-522
Cow position: chr20:32847000-32847515 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 17

Conread position: 3-531
Cow position: chr20:13877062-13876532 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 17

Conread position: 3-584
Cow position: chr20:11453708-11453127 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 17

Conread position: 4-622
Cow position: chr20:1990089-1989497 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 5

Conread position: 4-622
Cow position: chr20:6238999-6238388 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 16

Conread position: 5-356
Cow position: chr20:39415404-39415741 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 241
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 289, 20

Conread position: 5-367
Cow position: chr20:9473964-9473607 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 15

Conread position: 5-367
Cow position: chr20:19146516-19146882 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 19

Conread position: 5-376
Cow position: chr20:30817185-30817552 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 15

Conread position: 5-377
Cow position: chr20:10468724-10469083 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 15

Conread position: 5-383
Cow position: chr20:25844418-25844040 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 265
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 138, 15

Conread position: 5-460
Cow position: chr20:9014699-9014240 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 19

Conread position: 5-505
Cow position: chr20:23792253-23792758 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 15

Conread position: 5-508
Cow position: chr20:33363163-33363672 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 15

Conread position: 5-510
Cow position: chr20:18321145-18320637 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 19

Conread position: 5-510
Cow position: chr20:31746974-31746479 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 15

Conread position: 5-516
Cow position: chr20:5702397-5702888 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 15

Conread position: 5-520
Cow position: chr20:20202864-20203387 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 16

Conread position: 5-531
Cow position: chr20:11550015-11550542 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 15

Conread position: 5-548
Cow position: chr20:12996364-12995815 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 15

Conread position: 6-457
Cow position: chr20:14011635-14012073 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 296
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 146, 14

Conread position: 8-345
Cow position: chr20:41119575-41119897 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 232
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 22, 0

Conread position: 8-367
Cow position: chr20:12334034-12334383 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 82

Conread position: 8-372
Cow position: chr20:3781780-3781414 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 12

Conread position: 8-372
Cow position: chr20:26469426-26469050 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 12

Conread position: 8-375
Cow position: chr20:23679496-23679132 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 158

Conread position: 8-382
Cow position: chr20:33176852-33177213 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 16

Conread position: 8-418
Cow position: chr20:17903811-17904226 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 12

Conread position: 8-434
Cow position: chr20:22445985-22445565 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 16

Conread position: 8-469
Cow position: chr20:6258410-6257942 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 12

Conread position: 8-500
Cow position: chr20:6096832-6096347 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 12

Conread position: 8-508
Cow position: chr20:14806537-14807043 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 12

Conread position: 8-508
Cow position: chr20:19459988-19459509 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 12

Conread position: 8-513
Cow position: chr20:40176905-40177406 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 12

Conread position: 8-522
Cow position: chr20:28604867-28605379 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 12

Conread position: 8-531
Cow position: chr20:8577900-8578427 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 16

Conread position: 8-532
Cow position: chr20:2819219-2819721 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 12

Conread position: 8-533
Cow position: chr20:4945593-4945074 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 12

Conread position: 8-573
Cow position: chr20:9536789-9537355 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 12

Conread position: 9-509
Cow position: chr20:40423438-40422946 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 156

Conread position: 10-378
Cow position: chr20:19352107-19351734 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 7

Conread position: 10-504
Cow position: chr20:10235506-10235983 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 21

Conread position: 11-372
Cow position: chr20:13821927-13821569 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 6

Conread position: 11-377
Cow position: chr20:24391656-24391997 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 11-384
Cow position: chr20:17734117-17733748 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 102

Conread position: 11-408
Cow position: chr20:5104779-5104393 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 20

Conread position: 11-436
Cow position: chr20:23833792-23834214 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 6

Conread position: 11-459
Cow position: chr20:6501456-6501900 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 6

Conread position: 11-460
Cow position: chr20:31927802-31927355 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 6

Conread position: 11-467
Cow position: chr20:34001734-34001275 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 9

Conread position: 11-469
Cow position: chr20:26076743-26077198 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 6

Conread position: 11-508
Cow position: chr20:38817671-38818155 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 7

Conread position: 11-511
Cow position: chr20:19750967-19751463 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 350, 9

Conread position: 11-513
Cow position: chr20:34597461-34596936 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 340
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 21, 9

Conread position: 11-533
Cow position: chr20:29844698-29845231 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 248

Conread position: 11-564
Cow position: chr20:23065182-23064627 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 9

Conread position: 12-343
Cow position: chr20:41977079-41977398 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 230
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 145, 8

Conread position: 12-365
Cow position: chr20:14831965-14831609 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 123, 8

Conread position: 12-367
Cow position: chr20:18185234-18185574 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 219

Conread position: 12-391
Cow position: chr20:15068804-15069180 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 13

Conread position: 12-429
Cow position: chr20:7132014-7132419 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 54

Conread position: 12-524
Cow position: chr20:24069470-24069978 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 151

Conread position: 20-415
Cow position: chr20:14837089-14837487 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 169

Conread position: 20-500
Cow position: chr20:9433269-9433735 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 336
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 132, 10

Conread position: 20-512
Cow position: chr20:6423631-6424127 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 33

Conread position: 20-618
Cow position: chr20:581264-580660 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 37

Conread position: 22-471
Cow position: chr20:22313495-22313042 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 154

Conread position: 23-427
Cow position: chr20:40256651-40257046 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 289
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 30, 22

Conread position: 24-459
Cow position: chr20:20353247-20352806 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 149

Conread position: 25-469
Cow position: chr20:31740544-31740103 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 137

Conread position: 25-522
Cow position: chr20:9412164-9412658 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 140

Conread position: 26-451
Cow position: chr20:21019235-21019658 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 8

Conread position: 26-509
Cow position: chr20:33531979-33532459 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 141

Conread position: 29-511
Cow position: chr20:39418209-39417747 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 325
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 114, 34

Conread position: 30-367
Cow position: chr20:19410692-19410357 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 106

Conread position: 37-469
Cow position: chr20:33435482-33435039 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 90

Conread position: 37-511
Cow position: chr20:40781657-40782117 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 132

Conread position: 38-348
Cow position: chr20:1580964-1581275 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 107, 90

Conread position: 38-512
Cow position: chr20:33144872-33144393 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 108

Conread position: 39-415
Cow position: chr20:13450730-13450351 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 257
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 104, 150

Conread position: 40-327
Cow position: chr20:4781235-4781533 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 41-381
Cow position: chr20:7549941-7550260 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 244
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 6, 79

Conread position: 41-511
Cow position: chr20:19328086-19328544 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 68

Conread position: 45-551
Cow position: chr20:39398168-39398679 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 185

Conread position: 48-372
Cow position: chr20:18399452-18399777 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 118

Conread position: 48-373
Cow position: chr20:42138067-42138387 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 211
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 103, 29

Conread position: 49-474
Cow position: chr20:35797299-35797730 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 23

Conread position: 54-354
Cow position: chr20:207326-207025 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 207
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 89, 109

Conread position: 54-364
Cow position: chr20:3034794-3035108 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 233
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 93, 71

Conread position: 54-612
Cow position: chr20:5998977-5998430 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 129

Conread position: 56-500
Cow position: chr20:13751945-13752373 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 84

Conread position: 60-410
Cow position: chr20:15761244-15760890 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 112

Conread position: 61-533
Cow position: chr20:6240825-6240344 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 112

Conread position: 66-513
Cow position: chr20:12582238-12581794 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 67-513
Cow position: chr20:7426479-7426036 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 20

Conread position: 67-539
Cow position: chr20:42469478-42469946 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 331
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 8

Conread position: 67-553
Cow position: chr20:39728161-39728647 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 106

Conread position: 68-545
Cow position: chr20:38579025-38578571 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 59

Conread position: 70-524
Cow position: chr20:25009927-25009460 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 55

Conread position: 71-358
Cow position: chr20:10884652-10884360 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 280

Conread position: 82-376
Cow position: chr20:32636839-32636552 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 61, 19

Conread position: 82-658
Cow position: chr20:21714477-21715062 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 95

Conread position: 84-460
Cow position: chr20:35999415-35999800 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 254
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 16, 6

Conread position: 88-447
Cow position: chr20:31464647-31464280 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 255
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 45, 82

Conread position: 89-425
Cow position: chr20:14803993-14804335 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 233
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 54, 100

Conread position: 91-414
Cow position: chr20:7659475-7659161 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 61, 71

Conread position: 92-505
Cow position: chr20:8703174-8702758 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 302
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 29, 83

Conread position: 92-622
Cow position: chr20:31799458-31798923 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 351
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 60, 12

Conread position: 93-475
Cow position: chr20:3607216-3606839 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 78

Conread position: 94-373
Cow position: chr20:13967522-13967246 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 72

Conread position: 96-524
Cow position: chr20:22064812-22065234 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 74

Conread position: 98-368
Cow position: chr20:15582294-15582029 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 49, 74

Conread position: 101-408
Cow position: chr20:20312994-20312690 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 231
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 9, 18

Conread position: 107-505
Cow position: chr20:22235062-22235465 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 61

Conread position: 110-348
Cow position: chr20:10372544-10372305 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 42, 10

Conread position: 110-464
Cow position: chr20:39517765-39518118 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 7, 54

Conread position: 116-518
Cow position: chr20:40127577-40127177 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 277
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 26, 57

Conread position: 122-363
Cow position: chr20:3331528-3331284 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 25, 5

Conread position: 125-460
Cow position: chr20:11341037-11340697 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 280

Conread position: 127-515
Cow position: chr20:38873239-38872840 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 275
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 18, 35

Conread position: 131-460
Cow position: chr20:11741525-11741198 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 228
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 10, 40

Conread position: 131-474
Cow position: chr20:15549117-15548775 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 8

Conread position: 132-372
Cow position: chr20:29805882-29805649 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 20, 29

Conread position: 132-373
Cow position: chr20:25686572-25686337 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 14, 30

Conread position: 132-469
Cow position: chr20:4205742-4206088 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 29

Conread position: 132-469
Cow position: chr20:14572577-14572247 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 40

Conread position: 132-622
Cow position: chr20:5826718-5827204 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 8

Conread position: 134-368
Cow position: chr20:19265940-19266163 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 136-373
Cow position: chr20:34918063-34918286 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 154, 24

Conread position: 139-367
Cow position: chr20:11923453-11923235 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 150, 21

Conread position: 140-531
Cow position: chr20:34251890-34251493 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 273
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 148, 20

Conread position: 142-367
Cow position: chr20:9379199-9379417 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 150, 18

Conread position: 143-510
Cow position: chr20:34776977-34777336 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 257
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 143, 25

Conread position: 145-367
Cow position: chr20:28296083-28296299 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 147, 23

Conread position: 145-374
Cow position: chr20:22704081-22704306 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 145-376
Cow position: chr20:35897311-35897535 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 168, 15

Conread position: 145-377
Cow position: chr20:33831660-33831893 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 142, 15

Conread position: 145-447
Cow position: chr20:39019489-39019790 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 230
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 218, 25

Conread position: 145-456
Cow position: chr20:23505622-23505931 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 16

Conread position: 145-469
Cow position: chr20:7442331-7442020 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 217, 15

Conread position: 145-475
Cow position: chr20:11482346-11482012 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 147, 13

Conread position: 145-500
Cow position: chr20:15235557-15235900 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 16

Conread position: 145-502
Cow position: chr20:14759871-14759515 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 251
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 155, 13

Conread position: 145-505
Cow position: chr20:18618432-18618772 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 245
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 263, 25

Conread position: 145-508
Cow position: chr20:40511964-40511600 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 263
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 118, 16

Conread position: 145-511
Cow position: chr20:14879579-14879945 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 16

Conread position: 145-512
Cow position: chr20:382334-381972 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 268
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 105, 26

Conread position: 146-510
Cow position: chr20:38768659-38768305 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 14

Conread position: 148-434
Cow position: chr20:38415176-38414903 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 274, 8

Conread position: 148-460
Cow position: chr20:39325181-39325498 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 224
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 158, 20

Conread position: 149-325
Cow position: chr20:24902675-24902497 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 32, 144

Conread position: 150-512
Cow position: chr20:6602835-6603198 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 87

Conread position: 161-576
Cow position: chr20:34107921-34108330 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 273
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 222, 40

Conread position: 162-504
Cow position: chr20:11542477-11542135 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 102

Conread position: 171-356
Cow position: chr20:35760486-35760666 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 85, 0

Conread position: 171-383
Cow position: chr20:22345700-22345908 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 116, 11

Conread position: 173-367
Cow position: chr20:37200170-37200366 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 110, 49

Conread position: 173-466
Cow position: chr20:21928722-21929018 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 121, 18

Conread position: 174-344
Cow position: chr20:9988405-9988572 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 138, 73

Conread position: 174-345
Cow position: chr20:32069039-32068867 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 118, 0

Conread position: 174-348
Cow position: chr20:11043678-11043514 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 174-367
Cow position: chr20:26679941-26680133 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 127, 7

Conread position: 174-439
Cow position: chr20:11864318-11864047 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 117, 70

Conread position: 174-442
Cow position: chr20:14735494-14735758 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 67

Conread position: 174-496
Cow position: chr20:15593114-15593429 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 223
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 241, 67

Conread position: 174-502
Cow position: chr20:36207620-36207964 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 115

Conread position: 174-505
Cow position: chr20:32084266-32083929 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 17

Conread position: 174-510
Cow position: chr20:23846854-23846505 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 89

Conread position: 174-511
Cow position: chr20:8556456-8556113 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 263

Conread position: 174-512
Cow position: chr20:35907229-35906890 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 240
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 112, 56

Conread position: 174-522
Cow position: chr20:12239862-12239513 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 253
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 176, 112

Conread position: 174-533
Cow position: chr20:26996348-26996710 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 246

Conread position: 174-638
Cow position: chr20:34098140-34097674 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 54

Conread position: 175-367
Cow position: chr20:15312474-15312671 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 156
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 7, 0

Conread position: 175-526
Cow position: chr20:12420802-12420444 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 76

Conread position: 180-364
Cow position: chr20:11045502-11045679 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 52

Conread position: 180-364
Cow position: chr20:34240349-34240539 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 112, 0

Conread position: 180-373
Cow position: chr20:14471725-14471531 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 112, 29

Conread position: 180-373
Cow position: chr20:23936594-23936393 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 180-523
Cow position: chr20:27408054-27407722 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 190

Conread position: 181-524
Cow position: chr20:16935478-16935142 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 171

Conread position: 183-371
Cow position: chr20:2913790-2913976 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 104, 62

Conread position: 184-556
Cow position: chr20:15566003-15565630 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 260
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 113, 165

Conread position: 185-348
Cow position: chr20:33279883-33279720 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 102, 11

Conread position: 187-376
Cow position: chr20:41403399-41403593 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 7, 65

Conread position: 190-367
Cow position: chr20:28831797-28831976 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 0

Conread position: 190-469
Cow position: chr20:3740166-3739888 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 100, 40

Conread position: 193-500
Cow position: chr20:3321301-3320996 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 175, 48

Conread position: 193-513
Cow position: chr20:7439012-7438688 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 241
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 172, 20

Conread position: 194-344
Cow position: chr20:35995307-35995458 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 194-364
Cow position: chr20:283091-282922 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 96, 0

Conread position: 196-397
Cow position: chr20:576445-576240 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 197-339
Cow position: chr20:9701734-9701597 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 120
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 96, 18

Conread position: 197-368
Cow position: chr20:27977869-27977699 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 45

Conread position: 197-376
Cow position: chr20:18837320-18837140 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 149
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 0

Conread position: 197-471
Cow position: chr20:7210877-7211159 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 227

Conread position: 197-522
Cow position: chr20:3254889-3255207 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 105

Conread position: 198-447
Cow position: chr20:10789024-10788796 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 190
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 36, 0

Conread position: 199-367
Cow position: chr20:37272555-37272721 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 85, 34

Conread position: 199-376
Cow position: chr20:32988989-32988823 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 124, 31

Conread position: 200-509
Cow position: chr20:31080887-31081195 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 161, 33

Conread position: 201-503
Cow position: chr20:8307858-8308167 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 227
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 113, 239

Conread position: 201-560
Cow position: chr20:5636325-5636690 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 227

Conread position: 202-326
Cow position: chr20:9729932-9730052 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 6, 0

Conread position: 202-531
Cow position: chr20:30710804-30710458 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 237
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 90, 314

Conread position: 203-514
Cow position: chr20:14917147-14917447 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 93, 36

Conread position: 204-415
Cow position: chr20:24567122-24566910 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 139
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 204-512
Cow position: chr20:13025760-13025448 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 87, 17

Conread position: 204-531
Cow position: chr20:14433580-14433244 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 232
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 94, 43

Conread position: 206-367
Cow position: chr20:41309386-41309545 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 148, 78

Conread position: 206-375
Cow position: chr20:20471637-20471797 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 206-460
Cow position: chr20:36010639-36010903 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 85, 200

Conread position: 207-496
Cow position: chr20:28441177-28441470 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 107

Conread position: 208-377
Cow position: chr20:40449859-40450030 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 65, 15

Conread position: 208-469
Cow position: chr20:14679470-14679733 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 29

Conread position: 208-508
Cow position: chr20:42197179-42197467 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 208
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 154, 87

Conread position: 209-376
Cow position: chr20:41089941-41089779 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 209-516
Cow position: chr20:4334667-4334365 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 212
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 145, 44

Conread position: 210-360
Cow position: chr20:39247763-39247911 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 212-512
Cow position: chr20:2298926-2298630 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 143

Conread position: 215-500
Cow position: chr20:22484719-22485007 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 81, 26

Conread position: 219-529
Cow position: chr20:40446192-40446507 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 211
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 68, 22

Conread position: 220-383
Cow position: chr20:7600918-7600758 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 93, 33

Conread position: 221-376
Cow position: chr20:16585773-16585617 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 73, 151

Conread position: 221-500
Cow position: chr20:20099732-20099452 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 11

Conread position: 222-618
Cow position: chr20:36633679-36634071 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 268
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 64, 202

Conread position: 223-557
Cow position: chr20:22978185-22978532 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 27

Conread position: 224-386
Cow position: chr20:36439467-36439304 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 147

Conread position: 227-535
Cow position: chr20:38847368-38847051 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 214
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 59, 170

Conread position: 230-520
Cow position: chr20:25162258-25161957 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 214

Conread position: 232-384
Cow position: chr20:4892950-4892797 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 55, 116

Conread position: 232-461
Cow position: chr20:10188147-10188383 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 129, 58

Conread position: 232-465
Cow position: chr20:28955827-28955589 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 54, 25

Conread position: 235-502
Cow position: chr20:35407738-35408001 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 195
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 255, 135

Conread position: 237-564
Cow position: chr20:40691934-40692269 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 231
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 57, 13

Conread position: 239-529
Cow position: chr20:24833973-24834267 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 196
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 126, 166

Conread position: 241-334
Cow position: chr20:5633477-5633382 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 241-366
Cow position: chr20:22721902-22722030 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 241-376
Cow position: chr20:361440-361301 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 241-524
Cow position: chr20:32463640-32463352 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 128, 159

Conread position: 242-376
Cow position: chr20:39154675-39154805 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 243-511
Cow position: chr20:8546949-8547222 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 126, 77

Conread position: 244-459
Cow position: chr20:13794873-13795087 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 64

Conread position: 245-367
Cow position: chr20:11188920-11188791 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 246-344
Cow position: chr20:11392582-11392680 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 247-508
Cow position: chr20:11548834-11548569 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 30

Conread position: 251-611
Cow position: chr20:39267068-39266706 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 179

Conread position: 257-457
Cow position: chr20:24000902-24000693 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 174

Conread position: 257-531
Cow position: chr20:24711732-24712020 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 246

Conread position: 259-372
Cow position: chr20:38935337-38935223 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 89

Conread position: 260-498
Cow position: chr20:23286423-23286190 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 109, 64

Conread position: 260-524
Cow position: chr20:18379282-18379550 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 81, 164

Conread position: 263-451
Cow position: chr20:23103123-23103321 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 105, 0

Conread position: 263-510
Cow position: chr20:7738323-7738075 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 102, 168

Conread position: 264-496
Cow position: chr20:22265341-22265109 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 98, 119

Conread position: 271-517
Cow position: chr20:23541246-23540999 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 156

Conread position: 271-550
Cow position: chr20:41883647-41883924 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 190
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 97, 23

Conread position: 272-500
Cow position: chr20:26077745-26077520 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 223, 87

Conread position: 272-509
Cow position: chr20:38868557-38868790 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 94, 10

Conread position: 274-547
Cow position: chr20:18392347-18392080 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 188
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 12, 133

Conread position: 280-465
Cow position: chr20:16548356-16548166 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 10

Conread position: 283-510
Cow position: chr20:21204283-21204510 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 79, 73

Conread position: 285-467
Cow position: chr20:35192703-35192886 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 91, 84

Conread position: 285-505
Cow position: chr20:38670684-38670903 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 80, 64

Conread position: 285-536
Cow position: chr20:19091194-19090956 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 210, 84

Conread position: 286-509
Cow position: chr20:17100287-17100518 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 75, 152

Conread position: 289-474
Cow position: chr20:23506540-23506349 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 146

Conread position: 297-511
Cow position: chr20:38089849-38090069 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 73, 145

Conread position: 302-542
Cow position: chr20:38514724-38514968 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 64, 131

Conread position: 324-656
Cow position: chr20:7709821-7709478 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 230
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 109

Conread position: 330-537
Cow position: chr20:21815531-21815742 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 106

Conread position: 337-531
Cow position: chr20:15529845-15530039 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 83

Conread position: 367-526
Cow position: chr20:15766127-15766287 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 128, 10

Conread position: 428-658
Cow position: chr20:36023325-36023079 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 494-622
Cow position: chr20:38618005-38618138 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 0

Show alignments to all cow chromosomes.