Cow genome map

Conread name: Mixn-0015i14

Conread position: 1-405
Cow position: chr9:32236686-32236282 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 19

Conread position: 2-346
Cow position: chr9:44169826-44170171 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 240
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 147, 18

Conread position: 2-348
Cow position: chr9:6887300-6887651 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 50, 18

Conread position: 2-415
Cow position: chr9:4939772-4939358 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 18

Conread position: 2-425
Cow position: chr9:12379167-12379595 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 289
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 141, 18

Conread position: 2-429
Cow position: chr9:10566642-10566210 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 18

Conread position: 2-432
Cow position: chr9:28786063-28786492 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 288
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 138, 18

Conread position: 2-460
Cow position: chr9:35375847-35375391 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 18

Conread position: 3-348
Cow position: chr9:2287472-2287128 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 235
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 140, 17

Conread position: 3-354
Cow position: chr9:26064994-26065340 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 17

Conread position: 3-366
Cow position: chr9:62360804-62361169 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 251
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 137, 13

Conread position: 3-374
Cow position: chr9:53607969-53608337 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 17

Conread position: 3-381
Cow position: chr9:13221473-13221845 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 249
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 154, 17

Conread position: 3-390
Cow position: chr9:2676327-2675939 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 17

Conread position: 3-418
Cow position: chr9:34918858-34919255 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 291
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 36, 17

Conread position: 3-436
Cow position: chr9:33056246-33055809 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 284
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 35, 17

Conread position: 3-446
Cow position: chr9:22361438-22360989 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 17

Conread position: 3-460
Cow position: chr9:15982657-15983107 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 27

Conread position: 3-465
Cow position: chr9:31124498-31124969 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 17

Conread position: 3-503
Cow position: chr9:11299276-11299759 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 17

Conread position: 3-512
Cow position: chr9:21459737-21460239 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 17

Conread position: 3-525
Cow position: chr9:18381286-18380764 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 163

Conread position: 3-531
Cow position: chr9:17740523-17741045 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 20

Conread position: 3-531
Cow position: chr9:61023033-61022517 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 17

Conread position: 3-533
Cow position: chr9:20942188-20942723 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 17

Conread position: 3-535
Cow position: chr9:8937574-8937044 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 17

Conread position: 3-564
Cow position: chr9:1520304-1520879 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 17

Conread position: 4-361
Cow position: chr9:1855702-1855337 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 16

Conread position: 5-337
Cow position: chr9:22617041-22616719 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 5-353
Cow position: chr9:18121628-18121280 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 15

Conread position: 5-377
Cow position: chr9:1951847-1952214 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 25

Conread position: 5-378
Cow position: chr9:39971456-39971095 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 257
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 159, 15

Conread position: 5-383
Cow position: chr9:31639894-31640275 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 20

Conread position: 5-423
Cow position: chr9:9516348-9516765 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 13

Conread position: 5-448
Cow position: chr9:3411191-3410759 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 15

Conread position: 5-451
Cow position: chr9:24726256-24726691 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 25

Conread position: 5-470
Cow position: chr9:38961014-38961475 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 15

Conread position: 5-471
Cow position: chr9:1950341-1949871 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 15

Conread position: 5-501
Cow position: chr9:34696873-34697373 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 18

Conread position: 5-510
Cow position: chr9:33100732-33101201 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 15

Conread position: 5-511
Cow position: chr9:64092106-64091595 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 15

Conread position: 5-512
Cow position: chr9:6952507-6952013 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 71

Conread position: 5-513
Cow position: chr9:28747102-28747608 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 15

Conread position: 5-522
Cow position: chr9:20848360-20847838 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 15

Conread position: 5-524
Cow position: chr9:5393460-5392972 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 15

Conread position: 5-527
Cow position: chr9:6192041-6192561 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 15

Conread position: 5-535
Cow position: chr9:23388256-23388784 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 15

Conread position: 5-547
Cow position: chr9:56773508-56772953 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 15

Conread position: 5-561
Cow position: chr9:11313091-11313651 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 15

Conread position: 5-634
Cow position: chr9:64050138-64050781 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 15

Conread position: 6-427
Cow position: chr9:3004615-3004184 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 14

Conread position: 6-527
Cow position: chr9:29184714-29185240 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 157

Conread position: 6-635
Cow position: chr9:44466927-44467551 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 24

Conread position: 7-562
Cow position: chr9:16300147-16300707 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 13

Conread position: 8-139
Cow position: chr9:29825730-29825601 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 8-361
Cow position: chr9:9491209-9490863 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 118

Conread position: 8-365
Cow position: chr9:29330236-29330575 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 233
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 136, 25

Conread position: 8-367
Cow position: chr9:7410199-7409842 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 12

Conread position: 8-367
Cow position: chr9:34000192-34000557 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 12

Conread position: 8-368
Cow position: chr9:42585210-42585567 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 12

Conread position: 8-382
Cow position: chr9:8998773-8998406 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 9

Conread position: 8-384
Cow position: chr9:4929039-4928676 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 12

Conread position: 8-391
Cow position: chr9:30664362-30664748 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 12

Conread position: 8-434
Cow position: chr9:20900695-20901133 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 289
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 96, 12

Conread position: 8-458
Cow position: chr9:52504884-52505339 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 16

Conread position: 8-460
Cow position: chr9:648193-647742 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 16

Conread position: 8-469
Cow position: chr9:35904331-35904789 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 12

Conread position: 8-496
Cow position: chr9:23430729-23431218 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 12

Conread position: 8-500
Cow position: chr9:10308590-10309072 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 12

Conread position: 8-508
Cow position: chr9:20579175-20579678 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 341
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 124, 22

Conread position: 8-511
Cow position: chr9:61997185-61997687 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 12

Conread position: 8-513
Cow position: chr9:29006987-29006469 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 12

Conread position: 8-522
Cow position: chr9:55074714-55075227 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 165

Conread position: 8-524
Cow position: chr9:28726311-28726830 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 12

Conread position: 8-531
Cow position: chr9:9723464-9723983 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 11

Conread position: 8-531
Cow position: chr9:30401997-30402533 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 12

Conread position: 8-533
Cow position: chr9:9552505-9551986 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 12

Conread position: 8-533
Cow position: chr9:45285125-45285643 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 353, 12

Conread position: 8-559
Cow position: chr9:27697310-27697866 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 120

Conread position: 8-574
Cow position: chr9:17410769-17411344 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 12

Conread position: 8-575
Cow position: chr9:5510144-5509578 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 12

Conread position: 8-601
Cow position: chr9:46316368-46316954 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 12

Conread position: 8-618
Cow position: chr9:7634683-7634057 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 12

Conread position: 8-622
Cow position: chr9:39681778-39681132 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 12

Conread position: 9-376
Cow position: chr9:39428395-39428742 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 249
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 213, 123

Conread position: 9-384
Cow position: chr9:18110455-18110819 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 255
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 304, 21

Conread position: 9-465
Cow position: chr9:20989028-20989498 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 124

Conread position: 9-474
Cow position: chr9:28948272-28947813 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 11

Conread position: 10-310
Cow position: chr9:49544644-49544937 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 9

Conread position: 10-394
Cow position: chr9:12194499-12194116 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 157

Conread position: 11-361
Cow position: chr9:26057036-26057371 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 14

Conread position: 11-368
Cow position: chr9:27076846-27077182 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 252
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 89, 9

Conread position: 11-375
Cow position: chr9:1997545-1997199 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 263
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 136, 9

Conread position: 11-375
Cow position: chr9:30189529-30189153 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 266
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 86, 6

Conread position: 11-403
Cow position: chr9:53602826-53602447 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 274
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 121, 19

Conread position: 11-461
Cow position: chr9:32265978-32266424 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 299
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 131, 6

Conread position: 11-505
Cow position: chr9:62400372-62399883 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 9

Conread position: 11-512
Cow position: chr9:42498245-42497737 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 9

Conread position: 11-518
Cow position: chr9:22151687-22152179 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 346
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 122, 9

Conread position: 11-521
Cow position: chr9:62442697-62442193 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 345
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 136, 9

Conread position: 11-522
Cow position: chr9:31078667-31079177 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 9

Conread position: 11-548
Cow position: chr9:33682090-33681535 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 7

Conread position: 11-554
Cow position: chr9:50080628-50081170 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 167

Conread position: 11-618
Cow position: chr9:44831640-44832240 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 9

Conread position: 12-341
Cow position: chr9:35101290-35100958 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 75

Conread position: 12-345
Cow position: chr9:49279868-49279561 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 241
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 139, 0

Conread position: 12-371
Cow position: chr9:52724789-52725154 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 244
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 72, 305

Conread position: 12-407
Cow position: chr9:57950909-57951305 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 85

Conread position: 12-610
Cow position: chr9:24997088-24997710 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 18

Conread position: 18-461
Cow position: chr9:54205916-54206361 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 300
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 28, 12

Conread position: 19-372
Cow position: chr9:5141483-5141137 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 244
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 121, 145

Conread position: 19-377
Cow position: chr9:32396358-32395998 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 243
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 85, 38

Conread position: 19-474
Cow position: chr9:17929166-17928708 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 106

Conread position: 19-513
Cow position: chr9:5501257-5500763 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 76

Conread position: 20-348
Cow position: chr9:45974612-45974275 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 231
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 49, 180

Conread position: 20-368
Cow position: chr9:34310443-34310090 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 145

Conread position: 20-425
Cow position: chr9:50519689-50519284 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 271
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 123, 51

Conread position: 20-425
Cow position: chr9:51104977-51105392 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 153

Conread position: 20-460
Cow position: chr9:22318747-22318314 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 133

Conread position: 20-465
Cow position: chr9:52407577-52407124 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 84

Conread position: 20-540
Cow position: chr9:33823500-33823005 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 146

Conread position: 21-459
Cow position: chr9:5161665-5162084 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 105

Conread position: 22-558
Cow position: chr9:36446031-36445484 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 147

Conread position: 23-511
Cow position: chr9:21888575-21888084 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 150

Conread position: 25-474
Cow position: chr9:5836553-5836100 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 95

Conread position: 26-373
Cow position: chr9:3932368-3932020 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 145

Conread position: 26-460
Cow position: chr9:53257667-53258089 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 304
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 126, 44

Conread position: 26-521
Cow position: chr9:22443211-22443723 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 99

Conread position: 26-522
Cow position: chr9:22440109-22440574 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 341
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 100, 30

Conread position: 26-527
Cow position: chr9:51566099-51566598 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 19

Conread position: 26-565
Cow position: chr9:9461256-9461794 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 69

Conread position: 27-348
Cow position: chr9:47171797-47172125 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 232
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 19, 151

Conread position: 27-376
Cow position: chr9:824358-824018 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 250
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 5, 151

Conread position: 27-435
Cow position: chr9:52448909-52449316 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 277
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 103, 93

Conread position: 27-500
Cow position: chr9:6880172-6879703 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 82

Conread position: 27-511
Cow position: chr9:13205170-13205650 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 28

Conread position: 27-541
Cow position: chr9:42445571-42446099 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 230

Conread position: 28-474
Cow position: chr9:47905879-47906331 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 162

Conread position: 29-535
Cow position: chr9:35167573-35167066 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 147

Conread position: 31-377
Cow position: chr9:32812743-32812399 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 37

Conread position: 34-524
Cow position: chr9:34957657-34958153 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 139

Conread position: 37-367
Cow position: chr9:42998070-42998403 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 182

Conread position: 37-376
Cow position: chr9:28983578-28983240 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 242
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 77, 133

Conread position: 37-388
Cow position: chr9:25964432-25964786 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 247
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 101, 136

Conread position: 39-422
Cow position: chr9:26391154-26390780 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 73

Conread position: 41-383
Cow position: chr9:18002563-18002904 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 133

Conread position: 45-390
Cow position: chr9:10761580-10761926 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 238
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 98, 144

Conread position: 45-532
Cow position: chr9:6397403-6397891 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 325
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 22, 120

Conread position: 54-377
Cow position: chr9:5621656-5621982 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 110

Conread position: 54-529
Cow position: chr9:55796125-55795654 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 28

Conread position: 55-469
Cow position: chr9:22114267-22114679 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 22

Conread position: 55-474
Cow position: chr9:3379485-3379090 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 56-367
Cow position: chr9:31626504-31626215 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 220
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 75, 0

Conread position: 57-622
Cow position: chr9:5763258-5763827 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 108

Conread position: 58-367
Cow position: chr9:10092025-10092327 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 229
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 82, 26

Conread position: 61-505
Cow position: chr9:50606585-50607026 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 104

Conread position: 63-348
Cow position: chr9:54672493-54672206 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 80, 126

Conread position: 63-458
Cow position: chr9:5433997-5433599 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 102

Conread position: 66-367
Cow position: chr9:54997663-54997965 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 77, 11

Conread position: 66-415
Cow position: chr9:42426679-42427029 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 238
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 77, 123

Conread position: 66-496
Cow position: chr9:33218590-33219020 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 18

Conread position: 70-469
Cow position: chr9:43871331-43870931 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 103

Conread position: 71-348
Cow position: chr9:1650383-1650103 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 186
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 81, 127

Conread position: 71-377
Cow position: chr9:38344253-38343944 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 95

Conread position: 74-341
Cow position: chr9:3192323-3192592 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 69, 99

Conread position: 74-471
Cow position: chr9:21030672-21030262 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 100

Conread position: 75-367
Cow position: chr9:22227729-22228018 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 15, 91

Conread position: 77-511
Cow position: chr9:5218828-5219259 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 95

Conread position: 77-530
Cow position: chr9:34666760-34666340 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 85

Conread position: 78-384
Cow position: chr9:19542259-19541954 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 69, 94

Conread position: 78-509
Cow position: chr9:62357177-62357613 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 289
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 90

Conread position: 78-618
Cow position: chr9:4267642-4268168 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 71

Conread position: 82-367
Cow position: chr9:5319977-5319698 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 74

Conread position: 82-373
Cow position: chr9:39152340-39152620 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 61, 83

Conread position: 82-509
Cow position: chr9:45141280-45141682 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 50

Conread position: 84-411
Cow position: chr9:5442334-5442001 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 78

Conread position: 84-502
Cow position: chr9:5226820-5227253 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 82

Conread position: 84-514
Cow position: chr9:19714415-19713990 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 82

Conread position: 85-531
Cow position: chr9:13169331-13169769 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 7

Conread position: 87-371
Cow position: chr9:6933730-6934013 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 135

Conread position: 87-393
Cow position: chr9:3924960-3924664 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 225
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 45, 93

Conread position: 87-410
Cow position: chr9:37528798-37528478 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 78

Conread position: 89-621
Cow position: chr9:33093284-33092754 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 84

Conread position: 92-390
Cow position: chr9:61224178-61223878 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 201
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 55, 73

Conread position: 92-460
Cow position: chr9:15805584-15805958 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 81

Conread position: 92-696
Cow position: chr9:32371430-32372021 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 40

Conread position: 98-372
Cow position: chr9:48343930-48343661 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 5, 66

Conread position: 98-659
Cow position: chr9:53412919-53413489 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 22

Conread position: 100-539
Cow position: chr9:10118337-10118768 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 72

Conread position: 105-371
Cow position: chr9:41416674-41416412 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 61

Conread position: 105-525
Cow position: chr9:64155532-64155952 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 250

Conread position: 107-348
Cow position: chr9:11317797-11317555 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 40, 75

Conread position: 114-557
Cow position: chr9:36490580-36491035 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 59

Conread position: 116-480
Cow position: chr9:26344672-26345023 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 39

Conread position: 116-522
Cow position: chr9:55256237-55256650 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 90

Conread position: 117-337
Cow position: chr9:1350134-1350352 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 35, 61

Conread position: 117-518
Cow position: chr9:54681813-54681417 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 58

Conread position: 120-351
Cow position: chr9:27289972-27290205 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 120-369
Cow position: chr9:20318769-20319017 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 27, 52

Conread position: 125-460
Cow position: chr9:10011106-10010775 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 237
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 32, 117

Conread position: 127-360
Cow position: chr9:16745976-16745747 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 20, 35

Conread position: 127-382
Cow position: chr9:31587800-31588050 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 176
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 5, 13

Conread position: 131-465
Cow position: chr9:34468301-34468618 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 232
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 238, 8

Conread position: 131-510
Cow position: chr9:50076363-50075978 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 255
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 114, 297

Conread position: 132-360
Cow position: chr9:10666732-10666954 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 8, 30

Conread position: 132-367
Cow position: chr9:4127017-4126786 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 155, 7

Conread position: 132-367
Cow position: chr9:35305826-35306053 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 160, 9

Conread position: 132-367
Cow position: chr9:36410059-36410293 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 9, 30

Conread position: 132-373
Cow position: chr9:36067198-36066967 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 9, 18

Conread position: 132-373
Cow position: chr9:50295727-50295968 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 20, 40

Conread position: 132-373
Cow position: chr9:58669671-58669433 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 166, 29

Conread position: 132-376
Cow position: chr9:8600629-8600384 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 37

Conread position: 132-388
Cow position: chr9:45384046-45384300 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 54, 7

Conread position: 132-451
Cow position: chr9:35533659-35533979 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 232
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 9, 30

Conread position: 132-462
Cow position: chr9:35850191-35849866 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 9, 29

Conread position: 132-465
Cow position: chr9:29684438-29684104 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 233
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 12, 30

Conread position: 132-566
Cow position: chr9:33940900-33940466 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 37

Conread position: 133-520
Cow position: chr9:40542407-40542040 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 272
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 13, 37

Conread position: 133-531
Cow position: chr9:24887487-24887101 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 12

Conread position: 135-414
Cow position: chr9:1712199-1712467 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 226, 25

Conread position: 135-508
Cow position: chr9:59013045-59013423 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 275
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 6, 26

Conread position: 135-511
Cow position: chr9:64559597-64559966 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 255
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 159, 23

Conread position: 135-512
Cow position: chr9:55287603-55287977 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 257
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 64, 10

Conread position: 137-371
Cow position: chr9:19637352-19637575 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 138-348
Cow position: chr9:10877579-10877788 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 6, 23

Conread position: 139-539
Cow position: chr9:9753111-9753507 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 278
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 21, 6

Conread position: 139-539
Cow position: chr9:10144187-10144589 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 29

Conread position: 139-543
Cow position: chr9:29825314-29824912 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 291
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 221, 22

Conread position: 141-348
Cow position: chr9:13321765-13321966 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 21

Conread position: 142-440
Cow position: chr9:6225165-6225470 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 33, 112

Conread position: 144-364
Cow position: chr9:30749305-30749520 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 154, 13

Conread position: 145-319
Cow position: chr9:58131445-58131615 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 15, 0

Conread position: 145-372
Cow position: chr9:60037934-60037713 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 46, 25

Conread position: 145-376
Cow position: chr9:54924905-54924677 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 168, 15

Conread position: 145-395
Cow position: chr9:49404033-49403794 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 55, 22

Conread position: 145-419
Cow position: chr9:64516818-64517087 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 141, 16

Conread position: 145-451
Cow position: chr9:9416128-9416421 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 154, 23

Conread position: 145-465
Cow position: chr9:25546912-25546600 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 219
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 84, 16

Conread position: 145-465
Cow position: chr9:29191619-29191307 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 217
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 142, 24

Conread position: 145-466
Cow position: chr9:3070144-3070453 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 233
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 151, 15

Conread position: 145-466
Cow position: chr9:41513898-41513590 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 221
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 153, 15

Conread position: 145-475
Cow position: chr9:52578254-52578588 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 23

Conread position: 145-510
Cow position: chr9:13670916-13670546 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 16

Conread position: 145-510
Cow position: chr9:56453612-56453253 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 16

Conread position: 145-511
Cow position: chr9:9624749-9625096 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 258
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 110, 15

Conread position: 145-516
Cow position: chr9:18072839-18073188 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 23

Conread position: 145-536
Cow position: chr9:1751614-1751225 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 272
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 216, 16

Conread position: 145-543
Cow position: chr9:19068076-19067665 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 292
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 100, 16

Conread position: 145-551
Cow position: chr9:37069290-37069687 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 23

Conread position: 145-634
Cow position: chr9:55084018-55084518 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 23

Conread position: 146-343
Cow position: chr9:41412033-41412223 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 145, 15

Conread position: 146-512
Cow position: chr9:20091316-20090960 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 14

Conread position: 147-618
Cow position: chr9:8288895-8288421 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 316
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 214, 14

Conread position: 148-372
Cow position: chr9:4128507-4128725 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 217, 13

Conread position: 148-373
Cow position: chr9:34903826-34903606 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 150
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 148-377
Cow position: chr9:47875672-47875900 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 118, 13

Conread position: 148-415
Cow position: chr9:30735995-30735729 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 175
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 40, 32

Conread position: 149-376
Cow position: chr9:27052058-27052282 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 164, 11

Conread position: 149-423
Cow position: chr9:40105751-40105468 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 137, 11

Conread position: 149-533
Cow position: chr9:41283303-41282908 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 273
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 137, 21

Conread position: 150-465
Cow position: chr9:32732411-32732719 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 147, 10

Conread position: 157-384
Cow position: chr9:44108559-44108782 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 157-512
Cow position: chr9:8546589-8546242 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 209
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 338, 90

Conread position: 162-561
Cow position: chr9:17310296-17310694 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 273
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 199, 60

Conread position: 163-363
Cow position: chr9:41653054-41652854 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 164-623
Cow position: chr9:28391761-28392217 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 311
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 17, 58

Conread position: 171-376
Cow position: chr9:62134365-62134571 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 152, 7

Conread position: 173-348
Cow position: chr9:16182235-16182406 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 173-448
Cow position: chr9:34742473-34742747 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 194, 86

Conread position: 173-471
Cow position: chr9:3186395-3186080 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 122, 10

Conread position: 173-474
Cow position: chr9:5209838-5209531 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 218
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 206, 6

Conread position: 173-512
Cow position: chr9:34374674-34375012 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 45

Conread position: 174-364
Cow position: chr9:38875320-38875509 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 150
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 113, 67

Conread position: 174-367
Cow position: chr9:5532207-5532012 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 125, 0

Conread position: 174-367
Cow position: chr9:41995968-41995774 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 155
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 117, 0

Conread position: 174-368
Cow position: chr9:45170915-45171104 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 187, 54

Conread position: 174-370
Cow position: chr9:25958668-25958482 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 174-376
Cow position: chr9:8951157-8950962 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 56

Conread position: 174-376
Cow position: chr9:29034785-29034976 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 187, 62

Conread position: 174-466
Cow position: chr9:11068215-11068512 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 207
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 82, 44

Conread position: 174-473
Cow position: chr9:52001261-52000969 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 212
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 118, 17

Conread position: 174-474
Cow position: chr9:58204920-58204624 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 71, 119

Conread position: 174-474
Cow position: chr9:58979655-58979352 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 0

Conread position: 174-502
Cow position: chr9:26278919-26279247 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 118

Conread position: 174-510
Cow position: chr9:34901861-34902187 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 226
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 186, 44

Conread position: 174-511
Cow position: chr9:17871853-17872194 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 67

Conread position: 174-518
Cow position: chr9:32306982-32307325 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 236
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 184, 61

Conread position: 174-522
Cow position: chr9:9595700-9596051 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 83

Conread position: 174-531
Cow position: chr9:51620690-51620339 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 56

Conread position: 174-533
Cow position: chr9:33598235-33597877 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 73

Conread position: 174-533
Cow position: chr9:55118332-55117978 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 245
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 167, 26

Conread position: 174-539
Cow position: chr9:51204979-51204617 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 247

Conread position: 174-540
Cow position: chr9:38846095-38846446 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 113

Conread position: 174-560
Cow position: chr9:22696471-22696087 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 57

Conread position: 174-621
Cow position: chr9:34287048-34286610 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 41

Conread position: 174-622
Cow position: chr9:3782617-3782171 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 52

Conread position: 175-512
Cow position: chr9:61846897-61847212 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 227
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 124, 55

Conread position: 175-548
Cow position: chr9:23541165-23541505 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 263
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 50, 0

Conread position: 175-548
Cow position: chr9:30138379-30137997 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 264
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 189, 72

Conread position: 175-597
Cow position: chr9:31814125-31814556 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 303
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 146, 53

Conread position: 180-448
Cow position: chr9:28735726-28735465 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 220, 59

Conread position: 180-623
Cow position: chr9:18216852-18217293 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 139

Conread position: 181-388
Cow position: chr9:49206152-49206359 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 106, 180

Conread position: 181-428
Cow position: chr9:22754024-22753786 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 181-510
Cow position: chr9:62859922-62859599 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 223
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 106, 42

Conread position: 183-344
Cow position: chr9:31823156-31823313 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 183-460
Cow position: chr9:61493272-61492997 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 113, 180

Conread position: 183-512
Cow position: chr9:50139526-50139197 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 116, 56

Conread position: 183-524
Cow position: chr9:9573580-9573225 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 237
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 104, 56

Conread position: 185-367
Cow position: chr9:6840254-6840066 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 90, 0

Conread position: 185-390
Cow position: chr9:4192198-4192403 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 11

Conread position: 188-424
Cow position: chr9:12175940-12175694 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 99, 212

Conread position: 190-342
Cow position: chr9:52131256-52131107 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 100, 28

Conread position: 190-367
Cow position: chr9:35128732-35128560 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 97, 64

Conread position: 190-386
Cow position: chr9:51005125-51004938 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 193, 16

Conread position: 190-462
Cow position: chr9:32815876-32815615 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 208, 95

Conread position: 190-512
Cow position: chr9:33119644-33119973 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 239

Conread position: 190-524
Cow position: chr9:43757761-43757440 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 148, 57

Conread position: 190-537
Cow position: chr9:766912-767263 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 44

Conread position: 190-560
Cow position: chr9:11319394-11319766 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 41

Conread position: 190-618
Cow position: chr9:8563079-8562638 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 330

Conread position: 193-407
Cow position: chr9:40604185-40603961 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 99, 63

Conread position: 193-443
Cow position: chr9:50702877-50703129 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 181

Conread position: 193-532
Cow position: chr9:15225055-15225403 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 237
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 82, 65

Conread position: 197-371
Cow position: chr9:44408271-44408102 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 117, 44

Conread position: 197-372
Cow position: chr9:31292919-31292747 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 144
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 169, 27

Conread position: 197-389
Cow position: chr9:33038227-33038418 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 113, 121

Conread position: 197-428
Cow position: chr9:32711163-32710924 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 23, 61

Conread position: 197-465
Cow position: chr9:62724777-62724495 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 189
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 227

Conread position: 197-528
Cow position: chr9:43623491-43623164 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 221
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 300, 93

Conread position: 198-460
Cow position: chr9:6339032-6338758 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 193
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 98, 236

Conread position: 199-367
Cow position: chr9:50667653-50667487 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 87, 41

Conread position: 201-513
Cow position: chr9:53762928-53762605 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 125

Conread position: 202-336
Cow position: chr9:6117920-6118057 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 6, 34

Conread position: 202-664
Cow position: chr9:1938352-1937897 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 325
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 164, 54

Conread position: 204-373
Cow position: chr9:32829792-32829948 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 204-383
Cow position: chr9:30162387-30162206 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 204-383
Cow position: chr9:35303068-35303249 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 204-393
Cow position: chr9:41469634-41469830 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 206-334
Cow position: chr9:18827948-18827818 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 206-361
Cow position: chr9:58734597-58734439 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 206-367
Cow position: chr9:29092026-29091859 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 206-428
Cow position: chr9:43048404-43048624 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 80, 47

Conread position: 206-535
Cow position: chr9:27279540-27279202 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 239
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 60, 228

Conread position: 206-554
Cow position: chr9:1973164-1972822 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 39

Conread position: 207-511
Cow position: chr9:30652489-30652794 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 214
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 160, 9

Conread position: 207-524
Cow position: chr9:48628251-48627928 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 6

Conread position: 208-372
Cow position: chr9:1879596-1879440 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 33

Conread position: 208-471
Cow position: chr9:44833745-44834009 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 91, 55

Conread position: 208-476
Cow position: chr9:17799850-17799574 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 152, 23

Conread position: 208-520
Cow position: chr9:6686089-6685803 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 224
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 281, 20

Conread position: 211-460
Cow position: chr9:43207156-43207409 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 80, 185

Conread position: 212-383
Cow position: chr9:30195429-30195264 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 138
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 102, 0

Conread position: 213-505
Cow position: chr9:19493244-19493547 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 219

Conread position: 219-513
Cow position: chr9:61303216-61302911 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 220

Conread position: 219-519
Cow position: chr9:58614702-58614398 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 221
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 59, 196

Conread position: 219-533
Cow position: chr9:52637947-52638274 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 221
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 68, 277

Conread position: 221-534
Cow position: chr9:4512698-4512378 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 217
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 139, 69

Conread position: 223-649
Cow position: chr9:3738013-3738462 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 303
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 146, 133

Conread position: 225-429
Cow position: chr9:2135397-2135600 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 167

Conread position: 230-360
Cow position: chr9:54437462-54437337 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 230-384
Cow position: chr9:42037855-42037703 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 61

Conread position: 231-418
Cow position: chr9:8525037-8524847 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 9, 34

Conread position: 231-522
Cow position: chr9:37678088-37677796 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 202
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 57, 77

Conread position: 231-622
Cow position: chr9:9654112-9654508 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 7

Conread position: 232-360
Cow position: chr9:40543122-40543252 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 232-376
Cow position: chr9:46242064-46242212 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 232-512
Cow position: chr9:4340970-4341247 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 137

Conread position: 232-549
Cow position: chr9:50543224-50543552 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 223
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 107, 50

Conread position: 235-366
Cow position: chr9:35890727-35890859 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 235-511
Cow position: chr9:12910202-12910487 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 213
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 32, 203

Conread position: 235-564
Cow position: chr9:49292952-49293284 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 28

Conread position: 238-497
Cow position: chr9:21080754-21080491 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 33

Conread position: 239-509
Cow position: chr9:41728448-41728175 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 15

Conread position: 240-372
Cow position: chr9:31270970-31270839 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 241-372
Cow position: chr9:14358353-14358220 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 241-513
Cow position: chr9:19555565-19555288 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 35, 113

Conread position: 241-513
Cow position: chr9:30124111-30123840 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 102

Conread position: 243-418
Cow position: chr9:25469223-25469051 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 119, 27

Conread position: 243-503
Cow position: chr9:60027386-60027118 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 133, 60

Conread position: 243-513
Cow position: chr9:9402987-9403269 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 191

Conread position: 243-514
Cow position: chr9:32115422-32115688 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 117, 15

Conread position: 245-460
Cow position: chr9:34106909-34106682 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 245-474
Cow position: chr9:9823319-9823555 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 125, 0

Conread position: 245-512
Cow position: chr9:51720715-51720985 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 198
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 47, 173

Conread position: 245-543
Cow position: chr9:9405864-9406168 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 219
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 130, 90

Conread position: 248-377
Cow position: chr9:4323974-4324103 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 248-500
Cow position: chr9:11168914-11168654 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 44, 181

Conread position: 250-511
Cow position: chr9:8901042-8901310 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 23

Conread position: 251-372
Cow position: chr9:44921210-44921331 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 252-517
Cow position: chr9:47445847-47446104 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 91

Conread position: 253-509
Cow position: chr9:40215422-40215162 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 41, 176

Conread position: 256-521
Cow position: chr9:54493299-54493038 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 177
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 110, 7

Conread position: 258-505
Cow position: chr9:25557139-25556891 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 82, 76

Conread position: 258-622
Cow position: chr9:17518315-17518692 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 254
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 28, 96

Conread position: 260-516
Cow position: chr9:60394879-60395140 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 110, 170

Conread position: 261-474
Cow position: chr9:43937110-43936896 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 169

Conread position: 261-512
Cow position: chr9:39011306-39011557 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 68, 109

Conread position: 263-524
Cow position: chr9:5263669-5263401 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 107, 43

Conread position: 269-371
Cow position: chr9:9694860-9694758 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 95, 80

Conread position: 270-545
Cow position: chr9:36843949-36843674 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 22, 100

Conread position: 271-410
Cow position: chr9:42509275-42509129 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 56

Conread position: 274-535
Cow position: chr9:52267599-52267866 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 88, 164

Conread position: 281-508
Cow position: chr9:1867604-1867367 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 9, 121

Conread position: 283-533
Cow position: chr9:32669799-32670054 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 85, 145

Conread position: 284-614
Cow position: chr9:52839739-52840063 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 220
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 85, 139

Conread position: 285-498
Cow position: chr9:34284094-34283880 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 145
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 138

Conread position: 287-520
Cow position: chr9:6596090-6596326 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 78, 141

Conread position: 290-511
Cow position: chr9:10819691-10819915 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 127

Conread position: 292-520
Cow position: chr9:36628243-36628023 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 53

Conread position: 295-618
Cow position: chr9:52513316-52513631 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 217
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 136

Conread position: 297-467
Cow position: chr9:41486106-41486285 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 141

Conread position: 297-524
Cow position: chr9:6189237-6189465 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 87, 120

Conread position: 299-534
Cow position: chr9:13743800-13744037 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 127

Conread position: 314-509
Cow position: chr9:58131846-58132036 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 139, 54

Conread position: 318-533
Cow position: chr9:23955870-23956081 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 53, 114

Conread position: 318-634
Cow position: chr9:46664935-46664609 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 216
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 56, 110

Conread position: 323-547
Cow position: chr9:32981963-32982200 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 55, 113

Conread position: 329-513
Cow position: chr9:43159844-43159663 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 90, 40

Conread position: 329-560
Cow position: chr9:19758811-19758583 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 166, 41

Conread position: 331-521
Cow position: chr9:9460076-9459887 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 36

Conread position: 332-505
Cow position: chr9:29194923-29195105 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 18

Conread position: 336-531
Cow position: chr9:17840579-17840783 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 96

Conread position: 337-524
Cow position: chr9:37199218-37199028 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 83

Conread position: 360-526
Cow position: chr9:57131560-57131393 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 9, 80

Conread position: 361-560
Cow position: chr9:39758580-39758386 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 365-501
Cow position: chr9:63361661-63361796 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 129, 62

Conread position: 369-622
Cow position: chr9:36634714-36634964 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 129, 8

Conread position: 371-647
Cow position: chr9:16137290-16137573 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 127, 56

Conread position: 375-623
Cow position: chr9:55354659-55354423 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 118, 45

Conread position: 392-671
Cow position: chr9:34065517-34065811 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 196
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 106, 274

Conread position: 413-622
Cow position: chr9:46190154-46189946 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 85, 92

Conread position: 421-621
Cow position: chr9:8122494-8122280 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 432-560
Cow position: chr9:31354075-31354206 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 499-673
Cow position: chr9:25627935-25627763 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 70

Show alignments to all cow chromosomes.