Cow genome map

Conread name: Mixn-0017o11

Conread position: 88-385
Cow position: chr11:30120908-30120608 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 202
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 82

Conread position: 90-511
Cow position: chr11:78381291-78380886 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 277
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 61

Conread position: 99-449
Cow position: chr11:61958982-61958629 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 227
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 150

Conread position: 103-517
Cow position: chr11:71493092-71492675 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 284
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 11, 150

Conread position: 120-269
Cow position: chr11:71846560-71846407 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 27, 127

Conread position: 120-295
Cow position: chr11:2309662-2309835 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 49

Conread position: 120-372
Cow position: chr11:42793187-42792932 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 194
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 28, 127

Conread position: 120-411
Cow position: chr11:23128751-23128460 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 163, 52

Conread position: 120-461
Cow position: chr11:43897926-43898267 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 238
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 22, 102

Conread position: 120-512
Cow position: chr11:65157619-65157221 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 260
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 48, 20

Conread position: 122-288
Cow position: chr11:36672260-36672082 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 131

Conread position: 122-392
Cow position: chr11:67747072-67747345 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 25, 127

Conread position: 122-511
Cow position: chr11:30830822-30830440 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 19

Conread position: 123-261
Cow position: chr11:44642494-44642356 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 45, 120

Conread position: 123-274
Cow position: chr11:19508089-19508239 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 125
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 45, 21

Conread position: 123-277
Cow position: chr11:62155418-62155574 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 44, 14

Conread position: 123-277
Cow position: chr11:75748226-75748380 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 97

Conread position: 123-286
Cow position: chr11:36799507-36799347 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 78, 42

Conread position: 123-286
Cow position: chr11:77207840-77208002 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 97

Conread position: 123-286
Cow position: chr11:81174681-81174847 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 34, 121

Conread position: 123-288
Cow position: chr11:37347265-37347436 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 126

Conread position: 123-288
Cow position: chr11:48932792-48932625 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 44, 120

Conread position: 123-288
Cow position: chr11:63516615-63516785 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 25, 122

Conread position: 123-288
Cow position: chr11:75355402-75355566 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 118

Conread position: 123-290
Cow position: chr11:62808857-62808689 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 44, 121

Conread position: 123-295
Cow position: chr11:10992073-10992246 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 121

Conread position: 123-301
Cow position: chr11:63520564-63520743 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 50

Conread position: 123-306
Cow position: chr11:47165346-47165166 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 23

Conread position: 123-331
Cow position: chr11:59156080-59155877 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 159, 39

Conread position: 123-334
Cow position: chr11:17968784-17968579 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 44, 100

Conread position: 123-352
Cow position: chr11:16251457-16251223 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 24, 123

Conread position: 123-368
Cow position: chr11:65430853-65431091 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 46, 61

Conread position: 123-371
Cow position: chr11:2811932-2811690 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 25

Conread position: 123-380
Cow position: chr11:34032406-34032154 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 178
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 23

Conread position: 123-390
Cow position: chr11:39115285-39115552 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 49

Conread position: 123-392
Cow position: chr11:67550573-67550317 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 123-392
Cow position: chr11:81162640-81162372 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 26, 49

Conread position: 123-393
Cow position: chr11:42044199-42043934 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 28, 97

Conread position: 123-400
Cow position: chr11:5031986-5031707 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 24, 124

Conread position: 123-400
Cow position: chr11:50778162-50778436 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 124

Conread position: 123-400
Cow position: chr11:58588136-58588413 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 184
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 122

Conread position: 123-404
Cow position: chr11:47544919-47545204 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 124

Conread position: 123-427
Cow position: chr11:35684706-35684405 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 124

Conread position: 123-436
Cow position: chr11:16342450-16342124 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 42

Conread position: 123-443
Cow position: chr11:59702276-59702601 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 225
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 121

Conread position: 123-444
Cow position: chr11:44036507-44036832 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 219
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 27, 95

Conread position: 123-444
Cow position: chr11:69119091-69119407 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 231
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 24, 108

Conread position: 123-445
Cow position: chr11:952060-952378 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 217
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 92

Conread position: 123-445
Cow position: chr11:2092132-2092439 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 102

Conread position: 123-445
Cow position: chr11:7589982-7590302 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 220
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 122

Conread position: 123-445
Cow position: chr11:83230596-83230289 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 211
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 156, 29

Conread position: 123-449
Cow position: chr11:1071300-1070975 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 217
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 46, 77

Conread position: 123-449
Cow position: chr11:23138270-23137935 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 219
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 18, 124

Conread position: 123-449
Cow position: chr11:54334126-54334446 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 217
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 17, 60

Conread position: 123-449
Cow position: chr11:63847641-63847960 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 217
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 83

Conread position: 123-449
Cow position: chr11:73924767-73924445 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 232
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 45, 88

Conread position: 123-457
Cow position: chr11:377857-377517 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 236
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 24, 127

Conread position: 123-457
Cow position: chr11:44234146-44234479 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 231
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 45, 88

Conread position: 123-476
Cow position: chr11:68207046-68206701 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 241
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 120

Conread position: 123-499
Cow position: chr11:45872527-45872139 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 269
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 44, 123

Conread position: 123-501
Cow position: chr11:62620176-62620549 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 107

Conread position: 123-501
Cow position: chr11:77750976-77750588 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 250
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 148, 44

Conread position: 123-503
Cow position: chr11:48544234-48544611 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 267
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 108, 42

Conread position: 123-511
Cow position: chr11:29960096-29960475 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 83

Conread position: 123-511
Cow position: chr11:44031791-44032189 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 123

Conread position: 123-512
Cow position: chr11:27248283-27248672 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 121

Conread position: 123-512
Cow position: chr11:35154036-35153636 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 124

Conread position: 123-512
Cow position: chr11:79728882-79728488 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 264
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 126

Conread position: 123-513
Cow position: chr11:1849374-1848980 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 270
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 104

Conread position: 123-513
Cow position: chr11:11469842-11469472 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 272
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 45, 69

Conread position: 123-513
Cow position: chr11:57725037-57724638 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 261
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 128

Conread position: 123-513
Cow position: chr11:81138017-81138397 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 254
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 201, 119

Conread position: 123-514
Cow position: chr11:1625423-1625036 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 24

Conread position: 123-514
Cow position: chr11:65762805-65762399 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 32

Conread position: 123-514
Cow position: chr11:77745459-77745063 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 261
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 44, 25

Conread position: 123-515
Cow position: chr11:40972-41357 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 272
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 108

Conread position: 123-515
Cow position: chr11:4207104-4207498 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 262
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 127

Conread position: 123-515
Cow position: chr11:20761636-20762039 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 122

Conread position: 123-515
Cow position: chr11:30191961-30192365 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 127

Conread position: 123-515
Cow position: chr11:36182480-36182878 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 50

Conread position: 123-515
Cow position: chr11:47899068-47899437 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 278
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 24, 124

Conread position: 123-515
Cow position: chr11:50153027-50152626 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 124

Conread position: 123-515
Cow position: chr11:53778404-53778807 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 271
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 27, 126

Conread position: 123-515
Cow position: chr11:85723493-85723881 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 258
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 72, 122

Conread position: 123-516
Cow position: chr11:52381079-52380684 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 46

Conread position: 123-517
Cow position: chr11:11125455-11125854 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 119

Conread position: 123-517
Cow position: chr11:11557960-11558357 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 120

Conread position: 123-517
Cow position: chr11:15016837-15017247 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 44

Conread position: 123-517
Cow position: chr11:27405277-27404882 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 278
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 24, 104

Conread position: 123-517
Cow position: chr11:27746712-27747107 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 275
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 25, 124

Conread position: 123-517
Cow position: chr11:33348393-33348010 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 263
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 44, 123

Conread position: 123-517
Cow position: chr11:83043569-83043178 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 32

Conread position: 124-295
Cow position: chr11:25165236-25165407 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 144
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 44, 119

Conread position: 124-392
Cow position: chr11:8428287-8428572 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 137

Conread position: 124-428
Cow position: chr11:17660887-17661180 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 214
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 14, 120

Conread position: 124-437
Cow position: chr11:45631972-45631662 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 210
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 18, 123

Conread position: 124-439
Cow position: chr11:29947134-29946807 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 219
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 62

Conread position: 124-445
Cow position: chr11:23586427-23586750 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 224
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 26, 124

Conread position: 124-448
Cow position: chr11:25386858-25387186 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 231
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 44, 18

Conread position: 124-502
Cow position: chr11:24601763-24602132 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 257
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 23, 122

Conread position: 124-515
Cow position: chr11:20238466-20238863 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 118

Conread position: 124-515
Cow position: chr11:46746427-46746823 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 275
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 118, 43

Conread position: 124-517
Cow position: chr11:40818846-40818444 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 121

Conread position: 124-517
Cow position: chr11:62239541-62239930 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 272
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 44, 21

Conread position: 125-444
Cow position: chr11:64090293-64089986 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 218
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 120

Conread position: 125-483
Cow position: chr11:83066289-83066644 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 239
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 45

Conread position: 125-510
Cow position: chr11:45646800-45646416 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 118

Conread position: 125-512
Cow position: chr11:77758967-77758577 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 254
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 69

Conread position: 126-301
Cow position: chr11:25319851-25320025 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 42, 11

Conread position: 126-393
Cow position: chr11:49934947-49934669 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 190
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 19, 125

Conread position: 126-453
Cow position: chr11:55761678-55761985 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 218
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 178, 11

Conread position: 126-475
Cow position: chr11:17083500-17083171 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 249
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 42, 9

Conread position: 126-495
Cow position: chr11:34120998-34121362 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 9

Conread position: 126-513
Cow position: chr11:15632759-15632375 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 255
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 41, 9

Conread position: 126-515
Cow position: chr11:21728473-21728102 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 262
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 42, 118

Conread position: 126-517
Cow position: chr11:2907721-2907345 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 5

Conread position: 127-445
Cow position: chr11:33341351-33341032 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 74

Conread position: 127-517
Cow position: chr11:27913070-27913475 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 261
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 112

Conread position: 131-515
Cow position: chr11:70484058-70483664 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 252
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 7, 12

Conread position: 134-289
Cow position: chr11:50197637-50197470 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 8

Conread position: 134-449
Cow position: chr11:48272002-48272318 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 8

Conread position: 135-450
Cow position: chr11:66425084-66424763 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 211
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 116

Conread position: 135-451
Cow position: chr11:76114459-76114758 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 211
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 108

Conread position: 135-457
Cow position: chr11:70609591-70609921 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 221
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 32, 21

Conread position: 135-501
Cow position: chr11:34113075-34113426 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 149, 10

Conread position: 135-517
Cow position: chr11:259373-258984 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 268
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 33, 115

Conread position: 135-517
Cow position: chr11:15338878-15339244 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 254
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 40, 33

Conread position: 135-517
Cow position: chr11:36940794-36940405 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 256
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 60, 33

Conread position: 136-294
Cow position: chr11:7333917-7333758 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 108

Conread position: 137-269
Cow position: chr11:35363305-35363437 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 5

Conread position: 137-269
Cow position: chr11:84890942-84890811 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 5

Conread position: 137-287
Cow position: chr11:47586538-47586394 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 5

Conread position: 137-288
Cow position: chr11:47850832-47850988 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 128
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 137-292
Cow position: chr11:78543740-78543897 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 108

Conread position: 137-294
Cow position: chr11:67951152-67951000 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 5

Conread position: 137-333
Cow position: chr11:8936678-8936488 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 98

Conread position: 137-389
Cow position: chr11:50951361-50951614 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 8

Conread position: 137-434
Cow position: chr11:10213755-10213466 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 216
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 30, 44

Conread position: 137-441
Cow position: chr11:36238591-36238885 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 211
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 30, 8

Conread position: 137-442
Cow position: chr11:48496775-48496480 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 216
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 165, 30

Conread position: 137-447
Cow position: chr11:44636950-44636641 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 5

Conread position: 137-449
Cow position: chr11:28643889-28644205 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 216
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 45, 5

Conread position: 137-461
Cow position: chr11:13191030-13191364 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 222
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 30, 5

Conread position: 137-476
Cow position: chr11:8988418-8988091 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 223
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 5

Conread position: 137-497
Cow position: chr11:34145106-34144750 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 245
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 5

Conread position: 137-511
Cow position: chr11:64044049-64044400 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 258
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 5

Conread position: 137-511
Cow position: chr11:80820188-80819842 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 252
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 165, 5

Conread position: 137-512
Cow position: chr11:13592544-13592923 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 266
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 30, 5

Conread position: 137-512
Cow position: chr11:19592187-19591812 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 256
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 30, 5

Conread position: 137-512
Cow position: chr11:35580064-35580445 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 5

Conread position: 137-513
Cow position: chr11:42016828-42016454 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 255
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 5

Conread position: 137-513
Cow position: chr11:74316521-74316891 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 261
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 325, 5

Conread position: 137-514
Cow position: chr11:52297413-52297037 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 5

Conread position: 137-514
Cow position: chr11:61454724-61454317 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 277
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 30, 5

Conread position: 137-515
Cow position: chr11:55333719-55334106 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 263
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 30, 5

Conread position: 137-515
Cow position: chr11:72375878-72375479 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 263
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 5

Conread position: 137-516
Cow position: chr11:65607883-65607502 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 266
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 30, 5

Conread position: 137-517
Cow position: chr11:55052692-55053052 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 258
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 31, 86

Conread position: 139-427
Cow position: chr11:18572611-18572896 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 183
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 163, 103

Conread position: 139-513
Cow position: chr11:37804746-37804367 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 248
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 30, 96

Conread position: 141-342
Cow position: chr11:4412204-4412011 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 102

Conread position: 141-385
Cow position: chr11:3833543-3833309 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 53

Conread position: 141-517
Cow position: chr11:13061419-13061064 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 101

Conread position: 142-288
Cow position: chr11:2514778-2514636 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 66

Conread position: 142-316
Cow position: chr11:62749936-62749770 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 25, 85

Conread position: 142-356
Cow position: chr11:955177-955392 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 26, 103

Conread position: 142-380
Cow position: chr11:10620511-10620279 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 27, 39

Conread position: 142-385
Cow position: chr11:18591620-18591379 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 28, 100

Conread position: 142-388
Cow position: chr11:63157098-63156861 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 102

Conread position: 142-393
Cow position: chr11:63434244-63433996 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 101

Conread position: 142-422
Cow position: chr11:35874180-35873912 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 101

Conread position: 142-449
Cow position: chr11:59872745-59873047 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 204
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 155, 27

Conread position: 142-457
Cow position: chr11:3233895-3234199 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 213
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 71

Conread position: 142-478
Cow position: chr11:3393397-3393067 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 239
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 26, 42

Conread position: 142-499
Cow position: chr11:8525299-8524947 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 103

Conread position: 142-514
Cow position: chr11:17227834-17227466 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 245
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 25, 111

Conread position: 142-516
Cow position: chr11:21844321-21843951 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 259
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 29, 100

Conread position: 142-516
Cow position: chr11:34646403-34646783 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 86

Conread position: 142-517
Cow position: chr11:4732153-4732533 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 244
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 43

Conread position: 143-384
Cow position: chr11:45898240-45897997 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 25, 102

Conread position: 144-511
Cow position: chr11:2917772-2917410 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 99

Conread position: 144-517
Cow position: chr11:77705573-77705938 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 249
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 24, 54

Conread position: 148-403
Cow position: chr11:82796468-82796217 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 101

Conread position: 148-517
Cow position: chr11:80923506-80923137 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 95

Conread position: 149-457
Cow position: chr11:26845762-26845471 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 155, 54

Conread position: 149-516
Cow position: chr11:67600601-67600966 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 252
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 19, 93

Conread position: 150-437
Cow position: chr11:5286-5569 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 210
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 16, 36

Conread position: 150-476
Cow position: chr11:71868789-71868458 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 212
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 100

Conread position: 150-513
Cow position: chr11:26144279-26143914 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 251
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 17, 96

Conread position: 152-449
Cow position: chr11:30954820-30955116 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 92

Conread position: 152-513
Cow position: chr11:18698699-18699055 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 237
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 16, 90

Conread position: 153-441
Cow position: chr11:71501312-71501024 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 186
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 93

Conread position: 153-450
Cow position: chr11:62225810-62226106 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 195
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 155, 89

Conread position: 153-514
Cow position: chr11:46580182-46580534 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 237
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 149, 16

Conread position: 160-445
Cow position: chr11:16907213-16906937 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 7, 42

Conread position: 160-499
Cow position: chr11:77319242-77319583 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 226
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 8, 84

Conread position: 161-517
Cow position: chr11:75874921-75874583 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 235
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 7, 82

Conread position: 166-508
Cow position: chr11:81135325-81134989 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 242
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 107, 18

Conread position: 166-512
Cow position: chr11:76889885-76890225 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 232
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 35, 77

Conread position: 166-514
Cow position: chr11:80556057-80556404 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 74

Conread position: 166-515
Cow position: chr11:48295869-48296212 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 62

Conread position: 167-476
Cow position: chr11:17493316-17493628 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 213
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 104, 75

Conread position: 167-482
Cow position: chr11:56187457-56187758 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 213
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 135, 70

Conread position: 167-499
Cow position: chr11:42296780-42296456 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 226
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 137, 76

Conread position: 167-517
Cow position: chr11:11646907-11647286 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 259
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 115, 74

Conread position: 169-508
Cow position: chr11:45434926-45435255 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 236
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 134, 71

Conread position: 170-450
Cow position: chr11:35775179-35775456 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 183
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 101, 72

Conread position: 170-476
Cow position: chr11:2576063-2575763 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 212
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 113, 73

Conread position: 170-503
Cow position: chr11:71390723-71390399 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 231
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 116, 72

Conread position: 170-517
Cow position: chr11:3175531-3175857 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 244
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 293, 65

Conread position: 172-433
Cow position: chr11:55494522-55494781 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 130, 71

Conread position: 172-483
Cow position: chr11:39499201-39499507 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 224
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 121, 49

Conread position: 172-516
Cow position: chr11:51729131-51729462 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 232
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 130, 65

Conread position: 173-516
Cow position: chr11:44222734-44223069 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 238
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 109, 57

Conread position: 174-326
Cow position: chr11:70741131-70740982 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 128, 68

Conread position: 174-497
Cow position: chr11:63435362-63435691 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 220
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 97, 68

Conread position: 174-517
Cow position: chr11:35213316-35212982 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 226
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 139, 24

Conread position: 177-448
Cow position: chr11:69075756-69076025 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 107, 66

Conread position: 177-498
Cow position: chr11:18851766-18852073 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 224
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 285, 65

Conread position: 177-511
Cow position: chr11:32254371-32254033 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 222
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 44

Conread position: 181-511
Cow position: chr11:23407313-23407643 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 222
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 102, 61

Conread position: 185-478
Cow position: chr11:62663365-62663094 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 277, 57

Conread position: 185-515
Cow position: chr11:63999234-63998903 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 232
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 21, 29

Conread position: 190-511
Cow position: chr11:67615382-67615069 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 216
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 94, 30

Conread position: 190-513
Cow position: chr11:69977838-69978150 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 216
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 272, 45

Conread position: 191-517
Cow position: chr11:52690661-52690336 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 214
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 9, 52

Conread position: 194-511
Cow position: chr11:62788993-62789310 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 220
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 82, 51

Conread position: 198-387
Cow position: chr11:21497390-21497578 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 45

Conread position: 198-498
Cow position: chr11:47772523-47772212 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 216
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 86, 29

Conread position: 199-517
Cow position: chr11:67615059-67614736 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 227
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 77, 44

Conread position: 200-448
Cow position: chr11:41293948-41293701 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 164
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 44

Conread position: 204-503
Cow position: chr11:17036654-17036357 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 216
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 98, 9

Conread position: 204-517
Cow position: chr11:40608722-40608404 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 222
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 69, 39

Conread position: 215-515
Cow position: chr11:39060715-39060418 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 213
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 32, 27

Conread position: 219-483
Cow position: chr11:76652908-76653173 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 179
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 85, 24

Conread position: 219-516
Cow position: chr11:42066750-42067052 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 202
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 75, 22

Conread position: 220-400
Cow position: chr11:69392448-69392631 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 23

Conread position: 224-516
Cow position: chr11:30493893-30494176 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 239, 19

Conread position: 225-517
Cow position: chr11:31227864-31228142 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 200
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 18

Conread position: 231-503
Cow position: chr11:42160159-42159887 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 12

Conread position: 234-511
Cow position: chr11:62813045-62812769 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 37, 9

Conread position: 235-503
Cow position: chr11:80564198-80564472 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 69, 8

Conread position: 243-514
Cow position: chr11:8437777-8437504 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 188, 36

Conread position: 244-510
Cow position: chr11:33409347-33409084 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 59, 32

Conread position: 248-517
Cow position: chr11:30867099-30867366 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 184
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 5

Conread position: 250-514
Cow position: chr11:17721885-17721615 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 33, 177

Conread position: 267-516
Cow position: chr11:25119997-25119748 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 59

Conread position: 284-511
Cow position: chr11:21885784-21886013 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 90

Conread position: 285-517
Cow position: chr11:46922933-46922698 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 19, 142

Conread position: 291-517
Cow position: chr11:897632-897853 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 133

Conread position: 323-516
Cow position: chr11:2484804-2484608 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 32

Conread position: 339-502
Cow position: chr11:15279005-15278844 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 123, 73

Conread position: 339-516
Cow position: chr11:42206429-42206604 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 123, 85

Conread position: 340-516
Cow position: chr11:80296844-80296671 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 90

Show alignments to all cow chromosomes.