Cow genome map
| Conread name: | Mixn-0017o11 |
| Conread position: | 20-512 |
| Cow position: | chr12:42685277-42684773 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 280, 222 |
| Conread position: | 78-457 |
| Cow position: | chr12:27037715-27037345 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 257 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 90, 37 |
| Conread position: | 84-503 |
| Cow position: | chr12:5635716-5635299 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 41, 87 |
| Conread position: | 90-440 |
| Cow position: | chr12:6210421-6210071 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 17, 142 |
| Conread position: | 90-460 |
| Cow position: | chr12:45820621-45820259 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 16 |
| Conread position: | 90-517 |
| Cow position: | chr12:41083803-41084212 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 291 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 34, 159 |
| Conread position: | 106-351 |
| Cow position: | chr12:6164275-6164023 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 19, 141 |
| Conread position: | 111-288 |
| Cow position: | chr12:6117659-6117839 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 15, 135 |
| Conread position: | 117-500 |
| Cow position: | chr12:27563621-27563229 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 27, 70 |
| Conread position: | 120-266 |
| Cow position: | chr12:24032775-24032921 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 120-389 |
| Cow position: | chr12:18769305-18769034 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 51, 123 |
| Conread position: | 120-517 |
| Cow position: | chr12:9143162-9143553 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 108 |
| Conread position: | 121-295 |
| Cow position: | chr12:3994725-3994900 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 121-378 |
| Cow position: | chr12:731165-730910 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 46, 34 |
| Conread position: | 123-274 |
| Cow position: | chr12:29995689-29995537 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 48 |
| Conread position: | 123-280 |
| Cow position: | chr12:15240952-15240794 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 44, 122 |
| Conread position: | 123-281 |
| Cow position: | chr12:13156446-13156606 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 22, 124 |
| Conread position: | 123-281 |
| Cow position: | chr12:15162922-15163080 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 44, 81 |
| Conread position: | 123-284 |
| Cow position: | chr12:40270314-40270159 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 72, 6 |
| Conread position: | 123-284 |
| Cow position: | chr12:42167417-42167581 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 24, 65 |
| Conread position: | 123-286 |
| Cow position: | chr12:35984903-35985073 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 123-287 |
| Cow position: | chr12:28011127-28010963 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 44, 120 |
| Conread position: | 123-288 |
| Cow position: | chr12:32391617-32391789 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 124 |
| Conread position: | 123-294 |
| Cow position: | chr12:29162039-29161872 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 72, 25 |
| Conread position: | 123-345 |
| Cow position: | chr12:38454690-38454902 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 45, 19 |
| Conread position: | 123-356 |
| Cow position: | chr12:8710603-8710825 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 178, 44 |
| Conread position: | 123-389 |
| Cow position: | chr12:28471411-28471684 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 161, 119 |
| Conread position: | 123-394 |
| Cow position: | chr12:29484118-29483843 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 80 |
| Conread position: | 123-411 |
| Cow position: | chr12:18577621-18577899 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 179, 46 |
| Conread position: | 123-428 |
| Cow position: | chr12:17001030-17001334 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 27, 124 |
| Conread position: | 123-436 |
| Cow position: | chr12:28213290-28213593 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 46, 120 |
| Conread position: | 123-437 |
| Cow position: | chr12:19691464-19691151 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 224 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 27, 122 |
| Conread position: | 123-448 |
| Cow position: | chr12:19502648-19502332 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 27, 105 |
| Conread position: | 123-449 |
| Cow position: | chr12:31228346-31228669 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 44, 120 |
| Conread position: | 123-452 |
| Cow position: | chr12:29770801-29770481 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 120 |
| Conread position: | 123-453 |
| Cow position: | chr12:5905829-5906155 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 57 |
| Conread position: | 123-457 |
| Cow position: | chr12:25320695-25321017 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 94, 87 |
| Conread position: | 123-462 |
| Cow position: | chr12:18766209-18765864 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 24, 53 |
| Conread position: | 123-476 |
| Cow position: | chr12:24662887-24663243 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 254 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 42, 67 |
| Conread position: | 123-476 |
| Cow position: | chr12:30662177-30661826 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 45, 124 |
| Conread position: | 123-477 |
| Cow position: | chr12:5632102-5631760 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 46, 24 |
| Conread position: | 123-478 |
| Cow position: | chr12:4008509-4008155 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 248 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 27, 124 |
| Conread position: | 123-483 |
| Cow position: | chr12:18388510-18388157 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 44, 117 |
| Conread position: | 123-504 |
| Cow position: | chr12:35669694-35669318 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 45, 21 |
| Conread position: | 123-511 |
| Cow position: | chr12:6410956-6410575 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 179, 44 |
| Conread position: | 123-512 |
| Cow position: | chr12:17080030-17080428 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 15, 22 |
| Conread position: | 123-513 |
| Cow position: | chr12:11056648-11057029 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 277 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 24, 101 |
| Conread position: | 123-513 |
| Cow position: | chr12:42181369-42180965 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 275 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 24, 66 |
| Conread position: | 123-514 |
| Cow position: | chr12:18421155-18420757 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 123 |
| Conread position: | 123-514 |
| Cow position: | chr12:39486201-39486594 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 27, 106 |
| Conread position: | 123-515 |
| Cow position: | chr12:18123458-18123831 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 98 |
| Conread position: | 123-515 |
| Cow position: | chr12:25561142-25561531 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 90 |
| Conread position: | 123-516 |
| Cow position: | chr12:5714400-5714784 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 260 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 46, 122 |
| Conread position: | 123-516 |
| Cow position: | chr12:30745485-30745882 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 108 |
| Conread position: | 123-517 |
| Cow position: | chr12:15429828-15429430 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 122 |
| Conread position: | 123-517 |
| Cow position: | chr12:20777159-20776762 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 285 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 26, 85 |
| Conread position: | 123-517 |
| Cow position: | chr12:30590548-30590936 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 80 |
| Conread position: | 123-517 |
| Cow position: | chr12:30805630-30806020 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 44, 25 |
| Conread position: | 123-517 |
| Cow position: | chr12:35368415-35368811 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 257 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 44, 25 |
| Conread position: | 124-449 |
| Cow position: | chr12:32714815-32715141 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 31, 123 |
| Conread position: | 124-515 |
| Cow position: | chr12:25805337-25804980 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 261 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 44, 121 |
| Conread position: | 125-400 |
| Cow position: | chr12:18964155-18963880 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 23, 122 |
| Conread position: | 125-454 |
| Cow position: | chr12:30753496-30753821 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 73, 42 |
| Conread position: | 125-517 |
| Cow position: | chr12:16605872-16605502 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 268, 37 |
| Conread position: | 126-285 |
| Cow position: | chr12:38512067-38511904 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 41, 120 |
| Conread position: | 126-288 |
| Cow position: | chr12:18021368-18021533 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 129-476 |
| Cow position: | chr12:43942258-43942595 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 154, 31 |
| Conread position: | 130-326 |
| Cow position: | chr12:4116272-4116463 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 89 |
| Conread position: | 130-392 |
| Cow position: | chr12:19869250-19869502 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 38, 29 |
| Conread position: | 130-512 |
| Cow position: | chr12:31947902-31948274 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 153, 35 |
| Conread position: | 133-411 |
| Cow position: | chr12:35377986-35378260 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 34, 9 |
| Conread position: | 134-433 |
| Cow position: | chr12:30170455-30170753 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 170, 8 |
| Conread position: | 135-264 |
| Cow position: | chr12:5940131-5940261 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 111 |
| Conread position: | 135-449 |
| Cow position: | chr12:6720103-6720422 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 112 |
| Conread position: | 135-476 |
| Cow position: | chr12:42966784-42967118 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 32, 64 |
| Conread position: | 135-514 |
| Cow position: | chr12:36544865-36544480 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 77 |
| Conread position: | 137-258 |
| Cow position: | chr12:3510354-3510474 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 30, 7 |
| Conread position: | 137-288 |
| Cow position: | chr12:4182905-4182754 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 107 |
| Conread position: | 137-288 |
| Cow position: | chr12:20326561-20326713 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 7 |
| Conread position: | 137-354 |
| Cow position: | chr12:3579071-3579288 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 31, 8 |
| Conread position: | 137-503 |
| Cow position: | chr12:33851146-33851509 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 31, 8 |
| Conread position: | 137-510 |
| Cow position: | chr12:44602294-44602666 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 30, 7 |
| Conread position: | 137-512 |
| Cow position: | chr12:37770666-37771021 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 264 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 147, 5 |
| Conread position: | 137-514 |
| Cow position: | chr12:40910500-40910121 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 263 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 167, 34 |
| Conread position: | 137-517 |
| Cow position: | chr12:19508781-19508397 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 138-259 |
| Cow position: | chr12:5134931-5135053 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 30, 106 |
| Conread position: | 142-277 |
| Cow position: | chr12:8869085-8868951 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 16 |
| Conread position: | 142-298 |
| Cow position: | chr12:4809100-4809253 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 25, 66 |
| Conread position: | 142-392 |
| Cow position: | chr12:29969371-29969619 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 26, 70 |
| Conread position: | 142-393 |
| Cow position: | chr12:3906263-3906514 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 25, 102 |
| Conread position: | 142-400 |
| Cow position: | chr12:25452653-25452399 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 50 |
| Conread position: | 142-427 |
| Cow position: | chr12:39465373-39465654 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 26, 98 |
| Conread position: | 142-437 |
| Cow position: | chr12:25177792-25177515 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 32, 101 |
| Conread position: | 142-461 |
| Cow position: | chr12:33323704-33323388 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 103 |
| Conread position: | 142-502 |
| Cow position: | chr12:36501157-36500795 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 240 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 53, 24 |
| Conread position: | 142-514 |
| Cow position: | chr12:17031406-17031773 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 100 |
| Conread position: | 142-514 |
| Cow position: | chr12:41159385-41159745 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 58, 27 |
| Conread position: | 142-515 |
| Cow position: | chr12:44622145-44622525 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 101 |
| Conread position: | 142-516 |
| Cow position: | chr12:30210273-30210637 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 25, 100 |
| Conread position: | 142-517 |
| Cow position: | chr12:18518457-18518839 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 92 |
| Conread position: | 143-503 |
| Cow position: | chr12:32169332-32169699 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 102 |
| Conread position: | 143-517 |
| Cow position: | chr12:25917471-25917111 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 254 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 26, 81 |
| Conread position: | 144-400 |
| Cow position: | chr12:34673547-34673292 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 23, 64 |
| Conread position: | 144-449 |
| Cow position: | chr12:34148555-34148263 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 277, 98 |
| Conread position: | 149-440 |
| Cow position: | chr12:6485408-6485126 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 19, 12 |
| Conread position: | 150-444 |
| Cow position: | chr12:15530857-15531145 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 19, 93 |
| Conread position: | 150-500 |
| Cow position: | chr12:42879496-42879849 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 11, 20 |
| Conread position: | 151-433 |
| Cow position: | chr12:31429770-31429490 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 17, 92 |
| Conread position: | 151-501 |
| Cow position: | chr12:45965452-45965119 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 92 |
| Conread position: | 151-514 |
| Cow position: | chr12:11836033-11836392 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 16, 78 |
| Conread position: | 153-359 |
| Cow position: | chr12:26317265-26317472 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 53 |
| Conread position: | 160-517 |
| Cow position: | chr12:11587576-11587936 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 241 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 7, 99 |
| Conread position: | 161-517 |
| Cow position: | chr12:12637376-12637018 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 232 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 163-512 |
| Cow position: | chr12:15089327-15089678 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 166-517 |
| Cow position: | chr12:46714185-46714544 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 24, 80 |
| Conread position: | 169-404 |
| Cow position: | chr12:19507451-19507689 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 108, 47 |
| Conread position: | 172-499 |
| Cow position: | chr12:15122142-15122474 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 73 |
| Conread position: | 173-513 |
| Cow position: | chr12:1998977-1998635 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 22, 48 |
| Conread position: | 173-517 |
| Cow position: | chr12:4719768-4720111 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 70 |
| Conread position: | 174-516 |
| Cow position: | chr12:15703673-15703328 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 99, 48 |
| Conread position: | 183-517 |
| Cow position: | chr12:42784140-42784474 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 130, 57 |
| Conread position: | 184-511 |
| Cow position: | chr12:15050784-15050464 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 60 |
| Conread position: | 187-517 |
| Cow position: | chr12:41658886-41658554 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 133, 55 |
| Conread position: | 189-517 |
| Cow position: | chr12:37170104-37169782 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 54 |
| Conread position: | 192-503 |
| Cow position: | chr12:24032343-24032641 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 108, 51 |
| Conread position: | 192-511 |
| Cow position: | chr12:22285277-22284961 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 202, 51 |
| Conread position: | 194-445 |
| Cow position: | chr12:46120986-46120740 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 136, 49 |
| Conread position: | 204-438 |
| Cow position: | chr12:24116510-24116278 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 13, 38 |
| Conread position: | 204-511 |
| Cow position: | chr12:26217972-26217666 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 98, 39 |
| Conread position: | 204-517 |
| Cow position: | chr12:19258133-19258443 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 237, 39 |
| Conread position: | 213-517 |
| Cow position: | chr12:16670128-16670433 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 218 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 79, 31 |
| Conread position: | 223-517 |
| Cow position: | chr12:7884809-7884513 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 240, 22 |
| Conread position: | 226-511 |
| Cow position: | chr12:19261074-19261356 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 78, 17 |
| Conread position: | 229-517 |
| Cow position: | chr12:9767001-9766714 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 242-511 |
| Cow position: | chr12:18583102-18582838 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 221, 112 |
| Conread position: | 242-517 |
| Cow position: | chr12:3371653-3371381 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 61, 72 |
| Conread position: | 262-517 |
| Cow position: | chr12:5554425-5554170 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 33, 164 |
| Conread position: | 279-511 |
| Cow position: | chr12:17252272-17252042 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 63 |
| Conread position: | 280-510 |
| Cow position: | chr12:12232810-12233041 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 24, 74 |
| Conread position: | 291-511 |
| Cow position: | chr12:36261627-36261855 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 318-511 |
| Cow position: | chr12:29316496-29316301 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 75, 146 |
| Conread position: | 338-515 |
| Cow position: | chr12:38679035-38679213 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 124, 87 |
| Conread position: | 364-515 |
| Cow position: | chr12:2964059-2964211 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 98, 61 |
Show alignments to all cow chromosomes.