Cow genome map

Conread name: Mixn-0017o11

Conread position: 20-517
Cow position: chr15:21421327-21420831 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 293
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 87, 118

Conread position: 87-461
Cow position: chr15:51898544-51898170 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 245
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 25, 54

Conread position: 91-266
Cow position: chr15:14020785-14020608 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 16

Conread position: 106-269
Cow position: chr15:19403275-19403113 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 27

Conread position: 116-297
Cow position: chr15:5715838-5715653 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 178

Conread position: 120-357
Cow position: chr15:11646206-11646445 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 123

Conread position: 120-436
Cow position: chr15:16307698-16307390 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 128

Conread position: 120-448
Cow position: chr15:26573669-26573337 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 224
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 133

Conread position: 120-515
Cow position: chr15:12723368-12722970 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 272
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 47, 25

Conread position: 120-515
Cow position: chr15:20459018-20459425 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 265
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 47, 128

Conread position: 123-286
Cow position: chr15:12316203-12316041 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 44, 76

Conread position: 123-286
Cow position: chr15:23703052-23702891 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 119, 0

Conread position: 123-287
Cow position: chr15:41583189-41583025 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 120

Conread position: 123-334
Cow position: chr15:40009371-40009585 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 45, 121

Conread position: 123-351
Cow position: chr15:38103611-38103833 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 22, 62

Conread position: 123-374
Cow position: chr15:7456976-7456726 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 46, 120

Conread position: 123-382
Cow position: chr15:24044819-24045079 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 32, 120

Conread position: 123-384
Cow position: chr15:41360683-41360931 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 47

Conread position: 123-389
Cow position: chr15:50322874-50322608 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 44, 120

Conread position: 123-393
Cow position: chr15:4535186-4534921 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 72, 45

Conread position: 123-393
Cow position: chr15:22136961-22136700 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 98

Conread position: 123-393
Cow position: chr15:47842979-47843242 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 81

Conread position: 123-400
Cow position: chr15:21388886-21389161 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 189
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 124

Conread position: 123-407
Cow position: chr15:23567846-23568131 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 206
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 85, 47

Conread position: 123-411
Cow position: chr15:29340341-29340053 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 45, 19

Conread position: 123-420
Cow position: chr15:20352113-20351815 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 201
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 13, 87

Conread position: 123-427
Cow position: chr15:46868434-46868738 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 213
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 45, 38

Conread position: 123-437
Cow position: chr15:47822080-47821782 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 204
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 123-444
Cow position: chr15:5234725-5235036 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 219
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 44, 120

Conread position: 123-444
Cow position: chr15:29604438-29604739 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 211
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 44, 13

Conread position: 123-449
Cow position: chr15:1298016-1297693 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 210
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 54

Conread position: 123-449
Cow position: chr15:10336034-10335710 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 179, 118

Conread position: 123-478
Cow position: chr15:21908216-21907869 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 241
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 32, 121

Conread position: 123-483
Cow position: chr15:23696638-23696981 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 252
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 183, 39

Conread position: 123-483
Cow position: chr15:33306387-33306041 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 46

Conread position: 123-483
Cow position: chr15:33643365-33643012 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 44, 36

Conread position: 123-502
Cow position: chr15:5571357-5571730 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 242
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 44, 123

Conread position: 123-502
Cow position: chr15:24994246-24994612 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 268
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 34

Conread position: 123-503
Cow position: chr15:245053-244680 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 256
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 179, 43

Conread position: 123-504
Cow position: chr15:11011330-11011696 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 250
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 23

Conread position: 123-510
Cow position: chr15:20082039-20081665 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 268
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 26, 125

Conread position: 123-511
Cow position: chr15:20534171-20534563 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 259
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 85, 41

Conread position: 123-511
Cow position: chr15:30047260-30047664 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 275
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 24, 124

Conread position: 123-512
Cow position: chr15:39599719-39599337 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 249
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 179, 118

Conread position: 123-513
Cow position: chr15:22939054-22939436 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 254
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 145, 37

Conread position: 123-514
Cow position: chr15:17100435-17100817 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 261
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 44, 24

Conread position: 123-515
Cow position: chr15:12304920-12304525 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 120

Conread position: 123-515
Cow position: chr15:20486938-20487315 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 252
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 24

Conread position: 123-515
Cow position: chr15:36773415-36773795 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 261
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 167

Conread position: 123-515
Cow position: chr15:40957858-40957464 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 267
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 109

Conread position: 123-516
Cow position: chr15:8665303-8665722 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 278
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 44, 130

Conread position: 123-516
Cow position: chr15:16823215-16822836 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 265
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 45, 22

Conread position: 123-516
Cow position: chr15:20370184-20370567 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 254
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 142, 25

Conread position: 123-516
Cow position: chr15:43626741-43626349 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 269
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 72, 24

Conread position: 123-516
Cow position: chr15:50341394-50341003 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 263
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 34, 19

Conread position: 123-517
Cow position: chr15:794734-795133 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 266
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 24, 100

Conread position: 123-517
Cow position: chr15:1722571-1722957 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 274
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 120

Conread position: 123-517
Cow position: chr15:21894061-21893663 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 264
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 44, 121

Conread position: 123-517
Cow position: chr15:25208486-25208875 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 104

Conread position: 123-517
Cow position: chr15:33285161-33284760 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 259
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 29, 125

Conread position: 123-517
Cow position: chr15:43913805-43914214 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 270
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 24, 127

Conread position: 123-517
Cow position: chr15:47042358-47042759 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 284
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 24, 74

Conread position: 123-517
Cow position: chr15:51427544-51427942 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 264
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 46, 66

Conread position: 124-286
Cow position: chr15:34144877-34145040 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 122

Conread position: 124-290
Cow position: chr15:23332603-23332764 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 44, 88

Conread position: 124-302
Cow position: chr15:22751729-22751554 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 97

Conread position: 124-315
Cow position: chr15:23486893-23487080 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 178, 43

Conread position: 124-392
Cow position: chr15:6530565-6530837 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 23, 93

Conread position: 124-443
Cow position: chr15:50302461-50302142 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 220
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 43, 119

Conread position: 124-512
Cow position: chr15:29810387-29810014 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 254
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 180, 36

Conread position: 125-266
Cow position: chr15:1128274-1128130 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 90

Conread position: 125-306
Cow position: chr15:10845999-10845816 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 120

Conread position: 125-515
Cow position: chr15:26158340-26158713 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 274
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 43, 118

Conread position: 125-517
Cow position: chr15:1083095-1083486 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 265
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 22, 122

Conread position: 126-411
Cow position: chr15:24128300-24128023 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 11

Conread position: 132-511
Cow position: chr15:47843842-47844198 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 260
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 35, 10

Conread position: 132-514
Cow position: chr15:16112670-16112281 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 254
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 35, 10

Conread position: 134-367
Cow position: chr15:38877040-38877268 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 34, 8

Conread position: 134-512
Cow position: chr15:275910-275532 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 263
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 34, 10

Conread position: 134-515
Cow position: chr15:3700019-3700399 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 267
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 34, 10

Conread position: 134-517
Cow position: chr15:11560247-11560631 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 248
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 24

Conread position: 134-517
Cow position: chr15:27900238-27900621 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 257
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 8

Conread position: 135-286
Cow position: chr15:44641165-44641012 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 20, 117

Conread position: 135-400
Cow position: chr15:9928625-9928362 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 51

Conread position: 135-483
Cow position: chr15:21582652-21583006 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 233
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 33, 112

Conread position: 136-448
Cow position: chr15:33625214-33624909 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 207
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 6

Conread position: 136-450
Cow position: chr15:52611575-52611258 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 212
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 33, 107

Conread position: 137-234
Cow position: chr15:24822115-24822212 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 5

Conread position: 137-277
Cow position: chr15:21523051-21522911 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 5

Conread position: 137-288
Cow position: chr15:36422917-36422768 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 5

Conread position: 137-289
Cow position: chr15:9871150-9871304 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 5

Conread position: 137-392
Cow position: chr15:13515632-13515377 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 5

Conread position: 137-393
Cow position: chr15:35417361-35417615 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 76, 5

Conread position: 137-400
Cow position: chr15:4093668-4093930 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 12, 105

Conread position: 137-498
Cow position: chr15:23275798-23275436 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 261
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 31, 5

Conread position: 137-499
Cow position: chr15:5420622-5420980 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 257
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 32, 9

Conread position: 137-499
Cow position: chr15:25907172-25906820 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 263
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 31, 5

Conread position: 137-499
Cow position: chr15:31857852-31857491 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 5

Conread position: 137-502
Cow position: chr15:16667239-16667599 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 247
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 30, 5

Conread position: 137-509
Cow position: chr15:11658305-11658691 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 267
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 31, 5

Conread position: 137-511
Cow position: chr15:43827510-43827882 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 248
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 5

Conread position: 137-512
Cow position: chr15:10456749-10457139 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 265
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 33, 5

Conread position: 137-512
Cow position: chr15:20391018-20391388 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 5

Conread position: 137-513
Cow position: chr15:14871006-14870643 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 5

Conread position: 137-513
Cow position: chr15:17084472-17084094 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 261
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 30, 7

Conread position: 137-513
Cow position: chr15:36259341-36259709 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 21

Conread position: 137-514
Cow position: chr15:22532501-22532140 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 5

Conread position: 137-515
Cow position: chr15:11995762-11996142 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 256
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 31, 12

Conread position: 137-516
Cow position: chr15:38883416-38883031 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 259
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 30, 5

Conread position: 137-517
Cow position: chr15:14505689-14505330 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 258
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 30, 5

Conread position: 137-517
Cow position: chr15:20390438-20390826 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 252
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 30, 7

Conread position: 137-517
Cow position: chr15:20472285-20472660 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 237
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 5

Conread position: 137-517
Cow position: chr15:36391932-36391555 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 250
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 62

Conread position: 138-417
Cow position: chr15:47279876-47280153 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 106

Conread position: 138-483
Cow position: chr15:26903458-26903114 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 230
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 31

Conread position: 138-511
Cow position: chr15:23572415-23572799 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 254
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 29, 111

Conread position: 142-325
Cow position: chr15:6586457-6586639 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 101

Conread position: 142-393
Cow position: chr15:13387339-13387087 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 167
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 101

Conread position: 142-452
Cow position: chr15:42788894-42789195 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 224
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 162, 25

Conread position: 142-457
Cow position: chr15:40999809-41000125 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 198
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 101

Conread position: 142-483
Cow position: chr15:17763165-17762829 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 242
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 25, 10

Conread position: 142-503
Cow position: chr15:1329843-1330211 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 251
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 28, 101

Conread position: 142-513
Cow position: chr15:6970242-6969873 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 251
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 13

Conread position: 142-513
Cow position: chr15:19771391-19771025 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 246
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 53, 27

Conread position: 142-513
Cow position: chr15:46563234-46563589 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 256
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 25, 50

Conread position: 142-515
Cow position: chr15:41125311-41125672 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 259
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 26, 103

Conread position: 142-517
Cow position: chr15:36888083-36887723 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 265
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 25, 89

Conread position: 145-411
Cow position: chr15:26404531-26404275 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 23, 93

Conread position: 148-504
Cow position: chr15:18671194-18671552 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 240
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 19, 100

Conread position: 148-516
Cow position: chr15:22553292-22553656 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 241
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 123, 21

Conread position: 148-516
Cow position: chr15:39598496-39598129 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 94

Conread position: 148-517
Cow position: chr15:4296018-4295644 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 241
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 19, 91

Conread position: 149-427
Cow position: chr15:34206936-34207211 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 95

Conread position: 149-447
Cow position: chr15:29331257-29330964 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 200
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 6, 63

Conread position: 151-269
Cow position: chr15:33770868-33770749 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 17, 93

Conread position: 151-449
Cow position: chr15:12655661-12655963 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 199
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 17, 90

Conread position: 151-449
Cow position: chr15:39316584-39316886 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 203
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 96

Conread position: 151-495
Cow position: chr15:10608055-10608403 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 225
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 92

Conread position: 151-517
Cow position: chr15:23115095-23114718 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 249
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 11, 98

Conread position: 153-334
Cow position: chr15:15707862-15708045 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 90

Conread position: 153-500
Cow position: chr15:26079115-26079445 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 236
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 76

Conread position: 153-509
Cow position: chr15:5726573-5726207 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 237
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 92

Conread position: 153-510
Cow position: chr15:16261562-16261221 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 248
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 15, 30

Conread position: 155-516
Cow position: chr15:34897010-34896645 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 241
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 84

Conread position: 156-497
Cow position: chr15:8354289-8353945 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 89

Conread position: 156-512
Cow position: chr15:16543212-16543548 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 253
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 11, 75

Conread position: 161-512
Cow position: chr15:4178698-4179050 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 228
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 112, 11

Conread position: 162-502
Cow position: chr15:23865829-23866170 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 228
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 34, 83

Conread position: 166-382
Cow position: chr15:10512036-10512251 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 93, 68

Conread position: 166-452
Cow position: chr15:49258097-49257811 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 192
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 117, 76

Conread position: 167-515
Cow position: chr15:9879162-9879494 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 245
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 211, 60

Conread position: 168-514
Cow position: chr15:38036706-38037058 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 227
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 77

Conread position: 168-517
Cow position: chr15:22930107-22930466 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 234
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 78

Conread position: 169-448
Cow position: chr15:13554586-13554307 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 185
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 74

Conread position: 171-512
Cow position: chr15:14576564-14576219 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 237
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 111, 71

Conread position: 172-499
Cow position: chr15:17337587-17337274 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 220
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 111, 71

Conread position: 172-516
Cow position: chr15:53716661-53716319 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 70

Conread position: 172-517
Cow position: chr15:17870057-17870408 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 245
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 165, 70

Conread position: 172-517
Cow position: chr15:36353897-36353550 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 245
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 129, 70

Conread position: 174-513
Cow position: chr15:2380583-2380253 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 231
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 105, 68

Conread position: 174-517
Cow position: chr15:49274178-49273846 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 230
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 128, 68

Conread position: 180-515
Cow position: chr15:30470749-30471093 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 62

Conread position: 185-509
Cow position: chr15:51307464-51307778 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 222
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 118, 58

Conread position: 204-497
Cow position: chr15:14888444-14888733 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 198
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 71, 39

Conread position: 212-437
Cow position: chr15:35425625-35425843 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 31

Conread position: 215-457
Cow position: chr15:35440890-35441130 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 28

Conread position: 219-445
Cow position: chr15:21821170-21820949 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 152
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 81, 24

Conread position: 224-394
Cow position: chr15:18647554-18647389 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 19

Conread position: 229-427
Cow position: chr15:16908603-16908409 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 53, 14

Conread position: 243-447
Cow position: chr15:26718762-26718964 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 66

Conread position: 243-516
Cow position: chr15:41056046-41056324 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 186
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 24

Conread position: 244-517
Cow position: chr15:4694903-4694635 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 184
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 76

Conread position: 249-435
Cow position: chr15:44237571-44237386 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 64, 42

Conread position: 254-445
Cow position: chr15:34751233-34751047 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 50, 25

Conread position: 282-516
Cow position: chr15:21903290-21903522 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 8

Conread position: 285-514
Cow position: chr15:49132176-49131946 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 19, 6

Conread position: 318-515
Cow position: chr15:34223951-34223753 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 145, 107

Conread position: 319-516
Cow position: chr15:28099196-28098996 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 144, 106

Conread position: 329-516
Cow position: chr15:2931494-2931686 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 113, 36

Conread position: 331-517
Cow position: chr15:46283845-46284032 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 131, 99

Conread position: 338-514
Cow position: chr15:46059427-46059243 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 339-516
Cow position: chr15:8331138-8331312 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 124, 86

Conread position: 350-512
Cow position: chr15:848696-848536 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 114, 75

Conread position: 364-517
Cow position: chr15:840109-840263 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 98, 65

Conread position: 370-515
Cow position: chr15:47920117-47920261 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 114, 55

Show alignments to all cow chromosomes.