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Cow genome map

           
Conread name:
           
Mixn-0017o11
        

               
Conread position:
               
90-445
               

               
Cow position:
               
chr19:34000975-34001326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
79, 146
               

               
Conread position:
               
91-449
               

               
Cow position:
               
chr19:15068229-15067882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
23, 15
               

               
Conread position:
               
91-517
               

               
Cow position:
               
chr19:20935520-20935947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
33, 80
               

               
Conread position:
               
113-380
               

               
Cow position:
               
chr19:36125378-36125642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 24
               

               
Conread position:
               
113-517
               

               
Cow position:
               
chr19:26057755-26057357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
189, 109
               

               
Conread position:
               
120-378
               

               
Cow position:
               
chr19:4329251-4329000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 86
               

               
Conread position:
               
120-441
               

               
Cow position:
               
chr19:9542101-9541787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
25, 123
               

               
Conread position:
               
120-483
               

               
Cow position:
               
chr19:27612372-27612021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
45, 62
               

               
Conread position:
               
120-516
               

               
Cow position:
               
chr19:39576774-39576381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 123
               

               
Conread position:
               
122-476
               

               
Cow position:
               
chr19:11171423-11171066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 124
               

               
Conread position:
               
122-516
               

               
Cow position:
               
chr19:16621558-16621165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 125
               

               
Conread position:
               
123-250
               

               
Cow position:
               
chr19:24956643-24956518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 88
               

               
Conread position:
               
123-258
               

               
Cow position:
               
chr19:7612424-7612555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 36
               

               
Conread position:
               
123-268
               

               
Cow position:
               
chr19:53037355-53037208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
44, 122
               

               
Conread position:
               
123-277
               

               
Cow position:
               
chr19:32450877-32451035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 89
               

               
Conread position:
               
123-277
               

               
Cow position:
               
chr19:48409314-48409464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 24
               

               
Conread position:
               
123-280
               

               
Cow position:
               
chr19:23244721-23244564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 120
               

               
Conread position:
               
123-286
               

               
Cow position:
               
chr19:52773377-52773218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
123-288
               

               
Cow position:
               
chr19:46181015-46180852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 120
               

               
Conread position:
               
123-290
               

               
Cow position:
               
chr19:3246247-3246080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
123-342
               

               
Cow position:
               
chr19:36176544-36176766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
123-345
               

               
Cow position:
               
chr19:20693296-20693520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
45, 120
               

               
Conread position:
               
123-351
               

               
Cow position:
               
chr19:15767011-15767229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
156, 41
               

               
Conread position:
               
123-380
               

               
Cow position:
               
chr19:47118700-47118445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 124
               

               
Conread position:
               
123-381
               

               
Cow position:
               
chr19:17479161-17478903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 34
               

               
Conread position:
               
123-389
               

               
Cow position:
               
chr19:42240492-42240231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
45, 119
               

               
Conread position:
               
123-392
               

               
Cow position:
               
chr19:25999431-25999685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
45, 36
               

               
Conread position:
               
123-393
               

               
Cow position:
               
chr19:2734251-2734518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 46
               

               
Conread position:
               
123-393
               

               
Cow position:
               
chr19:4503019-4503288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
116, 37
               

               
Conread position:
               
123-400
               

               
Cow position:
               
chr19:31595098-31595376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
44, 110
               

               
Conread position:
               
123-421
               

               
Cow position:
               
chr19:20310831-20310543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
45, 106
               

               
Conread position:
               
123-422
               

               
Cow position:
               
chr19:43440962-43441265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
23, 55
               

               
Conread position:
               
123-432
               

               
Cow position:
               
chr19:15863239-15862943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
243, 47
               

               
Conread position:
               
123-433
               

               
Cow position:
               
chr19:33290281-33290592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 122
               

               
Conread position:
               
123-437
               

               
Cow position:
               
chr19:5656311-5656012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
24, 81
               

               
Conread position:
               
123-440
               

               
Cow position:
               
chr19:11376606-11376296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
44, 120
               

               
Conread position:
               
123-440
               

               
Cow position:
               
chr19:34620229-34619916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
45, 31
               

               
Conread position:
               
123-441
               

               
Cow position:
               
chr19:14592849-14593171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
24, 123
               

               
Conread position:
               
123-441
               

               
Cow position:
               
chr19:33468823-33469137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
44, 121
               

               
Conread position:
               
123-442
               

               
Cow position:
               
chr19:14347811-14348128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
44, 122
               

               
Conread position:
               
123-442
               

               
Cow position:
               
chr19:19919663-19919347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 121
               

               
Conread position:
               
123-444
               

               
Cow position:
               
chr19:8375502-8375185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
123-449
               

               
Cow position:
               
chr19:6516059-6516386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
47, 127
               

               
Conread position:
               
123-449
               

               
Cow position:
               
chr19:8033539-8033871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
42, 126
               

               
Conread position:
               
123-451
               

               
Cow position:
               
chr19:23222434-23222754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
32, 120
               

               
Conread position:
               
123-454
               

               
Cow position:
               
chr19:4445821-4445489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
47, 76
               

               
Conread position:
               
123-462
               

               
Cow position:
               
chr19:6079560-6079224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 36
               

               
Conread position:
               
123-466
               

               
Cow position:
               
chr19:38842756-38842417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
44, 116
               

               
Conread position:
               
123-476
               

               
Cow position:
               
chr19:25673720-25673374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
78, 120
               

               
Conread position:
               
123-483
               

               
Cow position:
               
chr19:10545910-10545549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 88
               

               
Conread position:
               
123-483
               

               
Cow position:
               
chr19:32457441-32457801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
123-483
               

               
Cow position:
               
chr19:39245699-39246062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
123-498
               

               
Cow position:
               
chr19:41584774-41585147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 121
               

               
Conread position:
               
123-499
               

               
Cow position:
               
chr19:21378666-21378290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 34
               

               
Conread position:
               
123-500
               

               
Cow position:
               
chr19:10213470-10213845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
45, 30
               

               
Conread position:
               
123-500
               

               
Cow position:
               
chr19:23784602-23784249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
24, 83
               

               
Conread position:
               
123-503
               

               
Cow position:
               
chr19:33903623-33903246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
123-503
               

               
Cow position:
               
chr19:46454649-46455021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
35, 102
               

               
Conread position:
               
123-508
               

               
Cow position:
               
chr19:38340177-38339790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
123-510
               

               
Cow position:
               
chr19:1968505-1968134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
46, 92
               

               
Conread position:
               
123-510
               

               
Cow position:
               
chr19:30232528-30232897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
46, 114
               

               
Conread position:
               
123-511
               

               
Cow position:
               
chr19:3621228-3621617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 122
               

               
Conread position:
               
123-511
               

               
Cow position:
               
chr19:24137057-24137453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
25, 124
               

               
Conread position:
               
123-511
               

               
Cow position:
               
chr19:24144816-24145209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 123
               

               
Conread position:
               
123-511
               

               
Cow position:
               
chr19:24358425-24358072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
123-511
               

               
Cow position:
               
chr19:25727079-25726697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 132
               

               
Conread position:
               
123-511
               

               
Cow position:
               
chr19:53791631-53791245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 127
               

               
Conread position:
               
123-512
               

               
Cow position:
               
chr19:10080868-10081277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 123
               

               
Conread position:
               
123-512
               

               
Cow position:
               
chr19:43035041-43035432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
45, 115
               

               
Conread position:
               
123-512
               

               
Cow position:
               
chr19:51621384-51620988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 120
               

               
Conread position:
               
123-513
               

               
Cow position:
               
chr19:5913151-5912767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 25
               

               
Conread position:
               
123-514
               

               
Cow position:
               
chr19:3812216-3811831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 124
               

               
Conread position:
               
123-515
               

               
Cow position:
               
chr19:5185451-5185066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 128
               

               
Conread position:
               
123-515
               

               
Cow position:
               
chr19:12601611-12601994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
89, 13
               

               
Conread position:
               
123-515
               

               
Cow position:
               
chr19:22765416-22765804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 124
               

               
Conread position:
               
123-515
               

               
Cow position:
               
chr19:48722824-48723225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 124
               

               
Conread position:
               
123-516
               

               
Cow position:
               
chr19:6531690-6532067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
44, 76
               

               
Conread position:
               
123-516
               

               
Cow position:
               
chr19:22043545-22043164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
152, 23
               

               
Conread position:
               
123-516
               

               
Cow position:
               
chr19:23785988-23786360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
22, 124
               

               
Conread position:
               
123-516
               

               
Cow position:
               
chr19:29368198-29368588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 121
               

               
Conread position:
               
123-516
               

               
Cow position:
               
chr19:29625703-29626093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 121
               

               
Conread position:
               
123-516
               

               
Cow position:
               
chr19:43058334-43058731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
8, 122
               

               
Conread position:
               
123-516
               

               
Cow position:
               
chr19:47671550-47671927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
123-517
               

               
Cow position:
               
chr19:4587921-4587534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
45, 120
               

               
Conread position:
               
123-517
               

               
Cow position:
               
chr19:7637437-7637041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
17, 62
               

               
Conread position:
               
123-517
               

               
Cow position:
               
chr19:20661617-20661218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 212
               

               
Conread position:
               
123-517
               

               
Cow position:
               
chr19:22039570-22039967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
46, 95
               

               
Conread position:
               
123-517
               

               
Cow position:
               
chr19:34166163-34166562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 122
               

               
Conread position:
               
123-517
               

               
Cow position:
               
chr19:34955898-34955520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 124
               

               
Conread position:
               
123-517
               

               
Cow position:
               
chr19:36845047-36845439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
44, 32
               

               
Conread position:
               
123-517
               

               
Cow position:
               
chr19:40051587-40051202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
123-517
               

               
Cow position:
               
chr19:41945988-41946374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 45
               

               
Conread position:
               
123-517
               

               
Cow position:
               
chr19:55952353-55951969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
124-301
               

               
Cow position:
               
chr19:4448333-4448518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 126
               

               
Conread position:
               
124-369
               

               
Cow position:
               
chr19:37647039-37646792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
124-377
               

               
Cow position:
               
chr19:33823117-33823371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
44, 120
               

               
Conread position:
               
124-438
               

               
Cow position:
               
chr19:18786524-18786209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
23, 98
               

               
Conread position:
               
124-511
               

               
Cow position:
               
chr19:21198927-21199338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 129
               

               
Conread position:
               
125-512
               

               
Cow position:
               
chr19:33033639-33033255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 10
               

               
Conread position:
               
125-517
               

               
Cow position:
               
chr19:729938-729554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 83
               

               
Conread position:
               
125-517
               

               
Cow position:
               
chr19:16566959-16567353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 90
               

               
Conread position:
               
126-288
               

               
Cow position:
               
chr19:6092573-6092735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
126-498
               

               
Cow position:
               
chr19:55688895-55688519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
126-513
               

               
Cow position:
               
chr19:2577377-2577750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
127-515
               

               
Cow position:
               
chr19:53623365-53623761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 116
               

               
Conread position:
               
128-511
               

               
Cow position:
               
chr19:10186306-10186695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 102
               

               
Conread position:
               
130-421
               

               
Cow position:
               
chr19:25628326-25628040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
148, 113
               

               
Conread position:
               
130-449
               

               
Cow position:
               
chr19:17795701-17796018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
20, 115
               

               
Conread position:
               
131-511
               

               
Cow position:
               
chr19:24760073-24759699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
131-517
               

               
Cow position:
               
chr19:6601900-6601523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 70
               

               
Conread position:
               
134-291
               

               
Cow position:
               
chr19:4722225-4722068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
42, 35
               

               
Conread position:
               
134-306
               

               
Cow position:
               
chr19:46918656-46918831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
134-444
               

               
Cow position:
               
chr19:10242394-10242694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 111
               

               
Conread position:
               
134-509
               

               
Cow position:
               
chr19:39751296-39751657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
135-268
               

               
Cow position:
               
chr19:25835545-25835408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
135-515
               

               
Cow position:
               
chr19:17972447-17972077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 94
               

               
Conread position:
               
137-288
               

               
Cow position:
               
chr19:15442579-15442730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 51
               

               
Conread position:
               
137-301
               

               
Cow position:
               
chr19:38724032-38723870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
137-389
               

               
Cow position:
               
chr19:22799265-22799013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 5
               

               
Conread position:
               
137-406
               

               
Cow position:
               
chr19:25655420-25655146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
30, 5
               

               
Conread position:
               
137-409
               

               
Cow position:
               
chr19:30533759-30534012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 5
               

               
Conread position:
               
137-448
               

               
Cow position:
               
chr19:8270789-8270475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
30, 5
               

               
Conread position:
               
137-483
               

               
Cow position:
               
chr19:33912815-33912469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
32, 5
               

               
Conread position:
               
137-501
               

               
Cow position:
               
chr19:35762438-35762077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 5
               

               
Conread position:
               
137-510
               

               
Cow position:
               
chr19:39057060-39057431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 5
               

               
Conread position:
               
137-512
               

               
Cow position:
               
chr19:42563950-42564336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
30, 5
               

               
Conread position:
               
137-512
               

               
Cow position:
               
chr19:48960208-48960582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 5
               

               
Conread position:
               
137-514
               

               
Cow position:
               
chr19:16096734-16096362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
31, 7
               

               
Conread position:
               
137-515
               

               
Cow position:
               
chr19:36059750-36060146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
30, 5
               

               
Conread position:
               
137-515
               

               
Cow position:
               
chr19:38392616-38393000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
31, 5
               

               
Conread position:
               
137-517
               

               
Cow position:
               
chr19:52456943-52456560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
30, 5
               

               
Conread position:
               
139-428
               

               
Cow position:
               
chr19:56063619-56063326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
29, 105
               

               
Conread position:
               
139-511
               

               
Cow position:
               
chr19:6049851-6049505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
29, 102
               

               
Conread position:
               
141-457
               

               
Cow position:
               
chr19:35018427-35018115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
27, 81
               

               
Conread position:
               
142-262
               

               
Cow position:
               
chr19:52136874-52136754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 101
               

               
Conread position:
               
142-288
               

               
Cow position:
               
chr19:19673231-19673378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
27, 102
               

               
Conread position:
               
142-380
               

               
Cow position:
               
chr19:53418446-53418694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
25, 105
               

               
Conread position:
               
142-444
               

               
Cow position:
               
chr19:8332115-8332420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
142-476
               

               
Cow position:
               
chr19:1664372-1664033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
26, 72
               

               
Conread position:
               
142-511
               

               
Cow position:
               
chr19:25769483-25769862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
27, 101
               

               
Conread position:
               
142-513
               

               
Cow position:
               
chr19:268175-268538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
160, 23
               

               
Conread position:
               
142-515
               

               
Cow position:
               
chr19:15887504-15887124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
26, 87
               

               
Conread position:
               
142-515
               

               
Cow position:
               
chr19:24062110-24062466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
25, 81
               

               
Conread position:
               
142-517
               

               
Cow position:
               
chr19:7668521-7668889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 50
               

               
Conread position:
               
143-447
               

               
Cow position:
               
chr19:20984950-20984653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
25, 70
               

               
Conread position:
               
143-475
               

               
Cow position:
               
chr19:35846718-35847053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 58
               

               
Conread position:
               
148-502
               

               
Cow position:
               
chr19:25855070-25854700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 101
               

               
Conread position:
               
151-318
               

               
Cow position:
               
chr19:35457491-35457660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 57
               

               
Conread position:
               
151-333
               

               
Cow position:
               
chr19:56140825-56141004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
17, 92
               

               
Conread position:
               
153-483
               

               
Cow position:
               
chr19:34287854-34288170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
153-503
               

               
Cow position:
               
chr19:13129702-13130044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 89
               

               
Conread position:
               
153-511
               

               
Cow position:
               
chr19:38499997-38500344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
154-517
               

               
Cow position:
               
chr19:15719787-15719434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
157-515
               

               
Cow position:
               
chr19:35107362-35107709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
160-499
               

               
Cow position:
               
chr19:21816798-21817142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
7, 86
               

               
Conread position:
               
161-457
               

               
Cow position:
               
chr19:25807465-25807177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
7, 82
               

               
Conread position:
               
161-514
               

               
Cow position:
               
chr19:39385200-39384856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
6, 69
               

               
Conread position:
               
162-476
               

               
Cow position:
               
chr19:54121118-54121415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
115, 37
               

               
Conread position:
               
162-503
               

               
Cow position:
               
chr19:26976221-26975891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
5, 79
               

               
Conread position:
               
162-517
               

               
Cow position:
               
chr19:46094799-46094433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
106, 5
               

               
Conread position:
               
163-517
               

               
Cow position:
               
chr19:41498165-41497804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
166-380
               

               
Cow position:
               
chr19:9408527-9408742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
34, 52
               

               
Conread position:
               
167-443
               

               
Cow position:
               
chr19:39485163-39485435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
135, 75
               

               
Conread position:
               
167-449
               

               
Cow position:
               
chr19:7404536-7404253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
167-517
               

               
Cow position:
               
chr19:31127522-31127157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
168-452
               

               
Cow position:
               
chr19:33237021-33237299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
168-517
               

               
Cow position:
               
chr19:11724672-11724325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
33, 75
               

               
Conread position:
               
169-500
               

               
Cow position:
               
chr19:47453282-47453608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
113, 52
               

               
Conread position:
               
169-506
               

               
Cow position:
               
chr19:18129406-18129742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
31, 75
               

               
Conread position:
               
172-513
               

               
Cow position:
               
chr19:42903857-42904182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
109, 69
               

               
Conread position:
               
172-517
               

               
Cow position:
               
chr19:52185920-52185563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
36, 46
               

               
Conread position:
               
173-449
               

               
Cow position:
               
chr19:4800593-4800869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
26, 8
               

               
Conread position:
               
174-514
               

               
Cow position:
               
chr19:52158386-52158733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
99, 68
               

               
Conread position:
               
185-457
               

               
Cow position:
               
chr19:25035348-25035613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
185-515
               

               
Cow position:
               
chr19:6334019-6334323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
298, 44
               

               
Conread position:
               
185-517
               

               
Cow position:
               
chr19:52750898-52750565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
189-511
               

               
Cow position:
               
chr19:28924625-28924948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
98, 53
               

               
Conread position:
               
192-499
               

               
Cow position:
               
chr19:42517388-42517078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
112, 51
               

               
Conread position:
               
195-517
               

               
Cow position:
               
chr19:24005539-24005845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
289, 46
               

               
Conread position:
               
198-481
               

               
Cow position:
               
chr19:23394661-23394940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
264, 28
               

               
Conread position:
               
198-513
               

               
Cow position:
               
chr19:11110857-11110539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
106, 42
               

               
Conread position:
               
199-517
               

               
Cow position:
               
chr19:2221202-2220878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 44
               

               
Conread position:
               
204-483
               

               
Cow position:
               
chr19:10929322-10929603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
98, 39
               

               
Conread position:
               
204-517
               

               
Cow position:
               
chr19:6278064-6278382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
69, 39
               

               
Conread position:
               
204-517
               

               
Cow position:
               
chr19:14632154-14631847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
98, 39
               

               
Conread position:
               
206-512
               

               
Cow position:
               
chr19:26753922-26754227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
98, 30
               

               
Conread position:
               
215-412
               

               
Cow position:
               
chr19:13757141-13757338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
87, 28
               

               
Conread position:
               
215-476
               

               
Cow position:
               
chr19:47986748-47987007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
70, 28
               

               
Conread position:
               
215-499
               

               
Cow position:
               
chr19:26022573-26022284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
215-511
               

               
Cow position:
               
chr19:41024116-41024409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
216-511
               

               
Cow position:
               
chr19:43413673-43413967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
219-517
               

               
Cow position:
               
chr19:20666175-20665873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
224-461
               

               
Cow position:
               
chr19:16105181-16104950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
80, 20
               

               
Conread position:
               
227-512
               

               
Cow position:
               
chr19:55583432-55583725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
228-517
               

               
Cow position:
               
chr19:40127261-40126970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
229-516
               

               
Cow position:
               
chr19:49221710-49221429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
75, 14
               

               
Conread position:
               
230-515
               

               
Cow position:
               
chr19:23832692-23832406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 255
               

               
Conread position:
               
233-507
               

               
Cow position:
               
chr19:23889571-23889303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
230, 11
               

               
Conread position:
               
233-517
               

               
Cow position:
               
chr19:33575433-33575712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
71, 10
               

               
Conread position:
               
236-517
               

               
Cow position:
               
chr19:12052934-12052653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
236-517
               

               
Cow position:
               
chr19:12067657-12067938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
242-511
               

               
Cow position:
               
chr19:11646490-11646752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
243, 29
               

               
Conread position:
               
242-517
               

               
Cow position:
               
chr19:34420331-34420603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
62, 80
               

               
Conread position:
               
243-499
               

               
Cow position:
               
chr19:13488586-13488330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
31, 186
               

               
Conread position:
               
245-512
               

               
Cow position:
               
chr19:47185161-47184891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 46
               

               
Conread position:
               
249-513
               

               
Cow position:
               
chr19:42768174-42767913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
55, 36
               

               
Conread position:
               
249-517
               

               
Cow position:
               
chr19:11560118-11559841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
251-497
               

               
Cow position:
               
chr19:33913451-33913704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
252-512
               

               
Cow position:
               
chr19:24692935-24693193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
209, 173
               

               
Conread position:
               
255-515
               

               
Cow position:
               
chr19:10238667-10238928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
30, 7
               

               
Conread position:
               
255-515
               

               
Cow position:
               
chr19:34758068-34757800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
266-516
               

               
Cow position:
               
chr19:23087926-23088174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
281-517
               

               
Cow position:
               
chr19:23756787-23756557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 145
               

               
Conread position:
               
295-514
               

               
Cow position:
               
chr19:34654641-34654419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
8, 60
               

               
Conread position:
               
301-517
               

               
Cow position:
               
chr19:39981713-39981934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
161, 80
               

               
Conread position:
               
344-511
               

               
Cow position:
               
chr19:22871236-22871068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
118, 81
               

               
Conread position:
               
345-517
               

               
Cow position:
               
chr19:27968676-27968500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
91, 80
               

               
Conread position:
               
349-512
               

               
Cow position:
               
chr19:4602670-4602507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
134, 74
               

               
Conread position:
               
354-517
               

               
Cow position:
               
chr19:6854947-6855111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
108, 69
               

               
Conread position:
               
354-517
               

               
Cow position:
               
chr19:25572800-25572967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               
Show alignments to all cow chromosomes.