Cow genome map
| Conread name: | Mixn-0017o11 |
| Conread position: | 89-517 |
| Cow position: | chr20:14433611-14433172 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 289 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 21, 158 |
| Conread position: | 90-421 |
| Cow position: | chr20:19363545-19363213 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 234 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 9, 45 |
| Conread position: | 118-381 |
| Cow position: | chr20:22313310-22313050 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 49, 122 |
| Conread position: | 120-288 |
| Cow position: | chr20:36331578-36331407 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 27, 127 |
| Conread position: | 120-441 |
| Cow position: | chr20:38768603-38768293 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 39 |
| Conread position: | 120-500 |
| Cow position: | chr20:7426339-7425967 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 268 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 26, 50 |
| Conread position: | 120-512 |
| Cow position: | chr20:29844905-29845298 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 45, 55 |
| Conread position: | 120-515 |
| Cow position: | chr20:3599540-3599156 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 267 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 47, 119 |
| Conread position: | 120-517 |
| Cow position: | chr20:27408028-27407647 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 129 |
| Conread position: | 120-517 |
| Cow position: | chr20:28296140-28296546 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 125 |
| Conread position: | 121-301 |
| Cow position: | chr20:39247760-39247942 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 26, 55 |
| Conread position: | 121-380 |
| Cow position: | chr20:7210887-7211148 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 23, 126 |
| Conread position: | 121-467 |
| Cow position: | chr20:22484714-22485057 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 238 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 46, 9 |
| Conread position: | 122-514 |
| Cow position: | chr20:23846820-23846420 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 123 |
| Conread position: | 123-283 |
| Cow position: | chr20:14735529-14735690 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 44, 120 |
| Conread position: | 123-286 |
| Cow position: | chr20:9379262-9379426 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 44, 121 |
| Conread position: | 123-286 |
| Cow position: | chr20:15312512-15312680 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 24, 127 |
| Conread position: | 123-289 |
| Cow position: | chr20:17904013-17904178 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 44, 119 |
| Conread position: | 123-290 |
| Cow position: | chr20:10468919-10469089 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 44, 85 |
| Conread position: | 123-292 |
| Cow position: | chr20:22445782-22445616 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 44, 87 |
| Conread position: | 123-295 |
| Cow position: | chr20:13967405-13967233 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 25 |
| Conread position: | 123-295 |
| Cow position: | chr20:18399613-18399789 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 124 |
| Conread position: | 123-333 |
| Cow position: | chr20:18618491-18618698 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 45, 32 |
| Conread position: | 123-374 |
| Cow position: | chr20:23505681-23505931 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 64 |
| Conread position: | 123-379 |
| Cow position: | chr20:35907194-35906942 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 72, 44 |
| Conread position: | 123-389 |
| Cow position: | chr20:6258211-6257940 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 22, 123 |
| Conread position: | 123-392 |
| Cow position: | chr20:3607101-3606840 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 20 |
| Conread position: | 123-393 |
| Cow position: | chr20:35797458-35797731 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 27, 67 |
| Conread position: | 123-401 |
| Cow position: | chr20:3740147-3739873 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 44, 123 |
| Conread position: | 123-403 |
| Cow position: | chr20:33363373-33363650 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 45, 24 |
| Conread position: | 123-427 |
| Cow position: | chr20:36207655-36207970 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 24, 80 |
| Conread position: | 123-427 |
| Cow position: | chr20:40511905-40511600 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 45, 78 |
| Conread position: | 123-436 |
| Cow position: | chr20:6096638-6096332 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 123-438 |
| Cow position: | chr20:13752093-13752391 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 45, 118 |
| Conread position: | 123-438 |
| Cow position: | chr20:23792460-23792770 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 101 |
| Conread position: | 123-441 |
| Cow position: | chr20:3321285-3320976 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 164, 47 |
| Conread position: | 123-442 |
| Cow position: | chr20:38578904-38578593 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 44, 61 |
| Conread position: | 123-443 |
| Cow position: | chr20:34777039-34777350 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 72, 43 |
| Conread position: | 123-445 |
| Cow position: | chr20:19751162-19751479 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 179, 118 |
| Conread position: | 123-447 |
| Cow position: | chr20:5826790-5827114 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 24, 124 |
| Conread position: | 123-448 |
| Cow position: | chr20:9412345-9412664 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 181, 47 |
| Conread position: | 123-448 |
| Cow position: | chr20:11550220-11550542 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 163, 122 |
| Conread position: | 123-449 |
| Cow position: | chr20:9536987-9537312 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 44, 123 |
| Conread position: | 123-450 |
| Cow position: | chr20:32988979-32988655 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 109, 34 |
| Conread position: | 123-450 |
| Cow position: | chr20:42469617-42469936 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 71, 19 |
| Conread position: | 123-454 |
| Cow position: | chr20:23064976-23064652 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 44, 85 |
| Conread position: | 123-455 |
| Cow position: | chr20:28067573-28067240 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 44, 120 |
| Conread position: | 123-457 |
| Cow position: | chr20:20241953-20242267 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 45, 92 |
| Conread position: | 123-469 |
| Cow position: | chr20:22959489-22959148 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 44, 119 |
| Conread position: | 123-474 |
| Cow position: | chr20:16935450-16935114 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 126 |
| Conread position: | 123-476 |
| Cow position: | chr20:20203069-20203418 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 118 |
| Conread position: | 123-477 |
| Cow position: | chr20:12239827-12239481 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 19, 77 |
| Conread position: | 123-483 |
| Cow position: | chr20:31746772-31746425 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 241 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 46, 16 |
| Conread position: | 123-500 |
| Cow position: | chr20:5998811-5998430 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 272 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 181, 32 |
| Conread position: | 123-511 |
| Cow position: | chr20:7659362-7658983 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 267 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 179, 46 |
| Conread position: | 123-512 |
| Cow position: | chr20:22064923-22065304 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 272 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 32, 102 |
| Conread position: | 123-512 |
| Cow position: | chr20:32847206-32847586 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 27, 138 |
| Conread position: | 123-513 |
| Cow position: | chr20:7442270-7441898 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 44, 36 |
| Conread position: | 123-514 |
| Cow position: | chr20:4334667-4334293 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 253 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 179, 37 |
| Conread position: | 123-514 |
| Cow position: | chr20:8578097-8578500 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 124 |
| Conread position: | 123-515 |
| Cow position: | chr20:4205816-4206200 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 263 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 25, 125 |
| Conread position: | 123-515 |
| Cow position: | chr20:12420768-12420373 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 37 |
| Conread position: | 123-515 |
| Cow position: | chr20:14572503-14572130 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 207, 45 |
| Conread position: | 123-515 |
| Cow position: | chr20:14806739-14807129 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 121 |
| Conread position: | 123-515 |
| Cow position: | chr20:26996383-26996780 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 124 |
| Conread position: | 123-516 |
| Cow position: | chr20:12582094-12581709 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 19 |
| Conread position: | 123-516 |
| Cow position: | chr20:22235168-22235546 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 45, 122 |
| Conread position: | 123-517 |
| Cow position: | chr20:3141436-3141823 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 72, 44 |
| Conread position: | 123-517 |
| Cow position: | chr20:6602894-6603277 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 258 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 123-517 |
| Cow position: | chr20:10200200-10200598 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 45, 108 |
| Conread position: | 123-517 |
| Cow position: | chr20:12996155-12995745 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 44, 51 |
| Conread position: | 123-517 |
| Cow position: | chr20:13269476-13269863 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 124 |
| Conread position: | 123-517 |
| Cow position: | chr20:38817863-38818237 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 44, 25 |
| Conread position: | 123-517 |
| Cow position: | chr20:39418041-39417655 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 74, 19 |
| Conread position: | 124-400 |
| Cow position: | chr20:21928758-21929034 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 43, 120 |
| Conread position: | 124-435 |
| Cow position: | chr20:18320941-18320630 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 23, 123 |
| Conread position: | 124-517 |
| Cow position: | chr20:7438997-7438609 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 45, 20 |
| Conread position: | 125-290 |
| Cow position: | chr20:11923384-11923222 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 42, 23 |
| Conread position: | 126-504 |
| Cow position: | chr20:14879643-14880021 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 21, 80 |
| Conread position: | 130-517 |
| Cow position: | chr20:8703048-8702682 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 268 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 172, 80 |
| Conread position: | 131-517 |
| Cow position: | chr20:40177111-40177493 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 173, 29 |
| Conread position: | 134-299 |
| Cow position: | chr20:10235721-10235884 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 8 |
| Conread position: | 134-401 |
| Cow position: | chr20:26076948-26077212 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 69 |
| Conread position: | 134-437 |
| Cow position: | chr20:31080907-31081204 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 11, 31 |
| Conread position: | 134-508 |
| Cow position: | chr20:28441195-28441558 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 245 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 34, 8 |
| Conread position: | 135-264 |
| Cow position: | chr20:40256834-40256965 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 7 |
| Conread position: | 135-295 |
| Cow position: | chr20:3781561-3781400 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 33, 108 |
| Conread position: | 135-301 |
| Cow position: | chr20:19410499-19410332 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 135-380 |
| Cow position: | chr20:40446194-40446438 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 15, 111 |
| Conread position: | 135-439 |
| Cow position: | chr20:33532173-33532469 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 32, 50 |
| Conread position: | 135-513 |
| Cow position: | chr20:21019433-21019802 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 33, 13 |
| Conread position: | 135-517 |
| Cow position: | chr20:39398352-39398730 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 107 |
| Conread position: | 136-483 |
| Cow position: | chr20:34597233-34596893 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 135, 106 |
| Conread position: | 136-499 |
| Cow position: | chr20:2298911-2298565 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 31, 125 |
| Conread position: | 137-282 |
| Cow position: | chr20:22704160-22704304 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 137-300 |
| Cow position: | chr20:28831836-28831999 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 137-348 |
| Cow position: | chr20:18837289-18837079 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 18, 5 |
| Conread position: | 137-402 |
| Cow position: | chr20:32084213-32083951 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 137-448 |
| Cow position: | chr20:17845831-17846133 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 64, 5 |
| Conread position: | 137-449 |
| Cow position: | chr20:5636352-5636660 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 137-511 |
| Cow position: | chr20:8556402-8556028 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 137-513 |
| Cow position: | chr20:10208674-10209051 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 137-513 |
| Cow position: | chr20:39517875-39518255 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 31, 7 |
| Conread position: | 137-516 |
| Cow position: | chr20:11741432-11741069 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 30, 5 |
| Conread position: | 137-517 |
| Cow position: | chr20:34098091-34097700 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 31, 155 |
| Conread position: | 137-517 |
| Cow position: | chr20:39325257-39325640 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 259 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 33, 5 |
| Conread position: | 140-483 |
| Cow position: | chr20:4892952-4892609 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 106 |
| Conread position: | 142-380 |
| Cow position: | chr20:36010665-36010905 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 103 |
| Conread position: | 142-450 |
| Cow position: | chr20:22978194-22978506 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 25, 14 |
| Conread position: | 142-511 |
| Cow position: | chr20:398430-398070 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 249 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 26, 43 |
| Conread position: | 142-512 |
| Cow position: | chr20:15569074-15568720 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 103 |
| Conread position: | 142-517 |
| Cow position: | chr20:3254925-3255282 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 270 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 27, 71 |
| Conread position: | 142-517 |
| Cow position: | chr20:8307889-8308252 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 26, 102 |
| Conread position: | 142-517 |
| Cow position: | chr20:28605081-28605454 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 26 |
| Conread position: | 143-374 |
| Cow position: | chr20:19146747-19146981 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 26, 101 |
| Conread position: | 143-440 |
| Cow position: | chr20:581044-580749 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 151, 22 |
| Conread position: | 144-502 |
| Cow position: | chr20:25162254-25161898 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 254 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 24, 100 |
| Conread position: | 144-516 |
| Cow position: | chr20:6240647-6240273 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 244 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 23, 99 |
| Conread position: | 145-281 |
| Cow position: | chr20:35407738-35407874 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 98 |
| Conread position: | 145-499 |
| Cow position: | chr20:9267222-9266870 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 123, 20 |
| Conread position: | 148-448 |
| Cow position: | chr20:11542400-11542106 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 21 |
| Conread position: | 149-439 |
| Cow position: | chr20:7362848-7363128 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 19, 92 |
| Conread position: | 151-337 |
| Cow position: | chr20:20312865-20312681 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 91 |
| Conread position: | 151-427 |
| Cow position: | chr20:19459775-19459509 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 114, 18 |
| Conread position: | 151-474 |
| Cow position: | chr20:32463640-32463323 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 91 |
| Conread position: | 151-475 |
| Cow position: | chr20:9433469-9433785 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 43, 61 |
| Conread position: | 151-517 |
| Cow position: | chr20:2819424-2819796 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 257 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 17, 113 |
| Conread position: | 153-510 |
| Cow position: | chr20:24069687-24070043 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 90 |
| Conread position: | 153-514 |
| Cow position: | chr20:8546949-8547305 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 255 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 15, 77 |
| Conread position: | 155-512 |
| Cow position: | chr20:20099708-20099359 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 46, 12 |
| Conread position: | 155-516 |
| Cow position: | chr20:28982584-28982945 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 88 |
| Conread position: | 161-404 |
| Cow position: | chr20:39267068-39266825 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 7, 84 |
| Conread position: | 163-380 |
| Cow position: | chr20:23103114-23103332 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 139, 79 |
| Conread position: | 166-513 |
| Cow position: | chr20:11611578-11611925 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 29, 80 |
| Conread position: | 166-517 |
| Cow position: | chr20:24711732-24712088 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 34, 77 |
| Conread position: | 169-515 |
| Cow position: | chr20:18379282-18379623 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 55 |
| Conread position: | 169-517 |
| Cow position: | chr20:28594183-28594540 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 235 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 133, 72 |
| Conread position: | 171-502 |
| Cow position: | chr20:34787041-34786709 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 102, 75 |
| Conread position: | 172-380 |
| Cow position: | chr20:35710075-35710283 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 104, 70 |
| Conread position: | 173-411 |
| Cow position: | chr20:22265341-22265112 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 181-457 |
| Cow position: | chr20:41883648-41883920 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 80, 20 |
| Conread position: | 192-369 |
| Cow position: | chr20:21204283-21204456 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 110, 50 |
| Conread position: | 199-517 |
| Cow position: | chr20:33819150-33819477 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 43 |
| Conread position: | 203-514 |
| Cow position: | chr20:7624312-7624014 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 100, 40 |
| Conread position: | 204-515 |
| Cow position: | chr20:21345363-21345685 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 98, 38 |
| Conread position: | 204-517 |
| Cow position: | chr20:38089847-38090165 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 100, 39 |
| Conread position: | 208-480 |
| Cow position: | chr20:17100300-17100567 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 96, 36 |
| Conread position: | 215-517 |
| Cow position: | chr20:16818362-16818666 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 32, 27 |
| Conread position: | 215-517 |
| Cow position: | chr20:38514728-38515037 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 215, 28 |
| Conread position: | 263-478 |
| Cow position: | chr20:5702716-5702928 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 271-511 |
| Cow position: | chr20:15529860-15530102 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 33, 94 |
| Conread position: | 274-503 |
| Cow position: | chr20:3148686-3148915 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 30, 152 |
| Conread position: | 285-513 |
| Cow position: | chr20:24097014-24097239 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 141 |
| Conread position: | 300-481 |
| Cow position: | chr20:630555-630733 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 162, 14 |
| Conread position: | 315-516 |
| Cow position: | chr20:26041054-26040850 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 150, 121 |
| Conread position: | 318-511 |
| Cow position: | chr20:19834783-19834589 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 114, 107 |
| Conread position: | 325-511 |
| Cow position: | chr20:4892065-4891876 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 138, 114 |
| Conread position: | 359-497 |
| Cow position: | chr20:12033534-12033398 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 104, 66 |
Show alignments to all cow chromosomes.