Cow genome map

Conread name: Mixn-0017o11

Conread position: 88-277
Cow position: chr21:39450333-39450135 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 28, 164

Conread position: 90-298
Cow position: chr21:42023964-42024169 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 34, 84

Conread position: 90-515
Cow position: chr21:17183760-17184185 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 283
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 19, 54

Conread position: 98-449
Cow position: chr21:42841745-42841398 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 230
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 33, 66

Conread position: 117-517
Cow position: chr21:641450-641853 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 65

Conread position: 119-411
Cow position: chr21:20418813-20418521 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 196
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 52, 18

Conread position: 119-517
Cow position: chr21:47760651-47761040 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 254
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 18

Conread position: 120-286
Cow position: chr21:32535847-32536012 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 61

Conread position: 120-288
Cow position: chr21:3813612-3813444 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 47, 122

Conread position: 120-394
Cow position: chr21:28442615-28442877 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 188
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 45

Conread position: 120-476
Cow position: chr21:19258697-19259041 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 238
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 25, 39

Conread position: 120-510
Cow position: chr21:11645098-11644704 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 122

Conread position: 120-512
Cow position: chr21:6833923-6834314 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 254
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 47, 27

Conread position: 120-517
Cow position: chr21:33982938-33982545 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 83

Conread position: 121-442
Cow position: chr21:15976507-15976822 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 214
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 74, 9

Conread position: 121-511
Cow position: chr21:41620997-41621391 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 252
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 23

Conread position: 123-230
Cow position: chr21:14125919-14126030 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 123-269
Cow position: chr21:31511163-31511306 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 48, 62

Conread position: 123-277
Cow position: chr21:18494839-18494997 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 124

Conread position: 123-286
Cow position: chr21:1464102-1464268 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 125

Conread position: 123-286
Cow position: chr21:5636847-5636682 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 123

Conread position: 123-287
Cow position: chr21:27743615-27743785 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 24, 49

Conread position: 123-292
Cow position: chr21:393895-394062 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 24, 104

Conread position: 123-298
Cow position: chr21:41957300-41957128 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 45, 19

Conread position: 123-298
Cow position: chr21:48251156-48250978 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 80

Conread position: 123-300
Cow position: chr21:12617013-12617188 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 45, 32

Conread position: 123-306
Cow position: chr21:20925633-20925447 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 121

Conread position: 123-334
Cow position: chr21:16612503-16612709 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 44, 29

Conread position: 123-355
Cow position: chr21:11359911-11360141 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 20, 57

Conread position: 123-369
Cow position: chr21:23150146-23149902 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 22

Conread position: 123-374
Cow position: chr21:2367214-2367456 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 179, 39

Conread position: 123-378
Cow position: chr21:23192644-23192381 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 124

Conread position: 123-380
Cow position: chr21:13488393-13488657 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 122

Conread position: 123-384
Cow position: chr21:24642393-24642654 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 19

Conread position: 123-389
Cow position: chr21:725018-724746 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 24, 126

Conread position: 123-389
Cow position: chr21:5426817-5427079 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 180
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 76, 40

Conread position: 123-389
Cow position: chr21:19363590-19363320 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 25, 52

Conread position: 123-389
Cow position: chr21:35997047-35997310 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 121

Conread position: 123-392
Cow position: chr21:15611025-15611282 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 182
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 95

Conread position: 123-393
Cow position: chr21:30607214-30606943 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 175
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 76, 82

Conread position: 123-393
Cow position: chr21:34391097-34390832 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 44, 24

Conread position: 123-394
Cow position: chr21:4998613-4998350 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 124

Conread position: 123-400
Cow position: chr21:42540347-42540072 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 22, 104

Conread position: 123-401
Cow position: chr21:16187932-16187656 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 158, 48

Conread position: 123-404
Cow position: chr21:33210072-33210342 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 24, 123

Conread position: 123-411
Cow position: chr21:28626112-28626398 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 27, 124

Conread position: 123-411
Cow position: chr21:30990395-30990126 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 46, 19

Conread position: 123-429
Cow position: chr21:12723030-12723329 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 24, 103

Conread position: 123-429
Cow position: chr21:42348804-42348517 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 123

Conread position: 123-430
Cow position: chr21:45355710-45356013 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 193
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 45

Conread position: 123-433
Cow position: chr21:38120981-38121282 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 181, 49

Conread position: 123-441
Cow position: chr21:35569503-35569173 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 231
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 32

Conread position: 123-444
Cow position: chr21:4399673-4399997 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 216
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 36

Conread position: 123-447
Cow position: chr21:33595-33914 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 215
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 49

Conread position: 123-447
Cow position: chr21:33263724-33264039 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 214
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 7

Conread position: 123-449
Cow position: chr21:12801873-12801548 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 222
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 85

Conread position: 123-449
Cow position: chr21:13128220-13127902 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 212
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 44, 76

Conread position: 123-449
Cow position: chr21:18790682-18790367 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 218
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 44, 25

Conread position: 123-449
Cow position: chr21:33350616-33350938 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 225
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 23, 117

Conread position: 123-449
Cow position: chr21:33562887-33563202 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 213
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 119

Conread position: 123-449
Cow position: chr21:37345228-37344903 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 218
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 21, 51

Conread position: 123-449
Cow position: chr21:39401468-39401793 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 216
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 120

Conread position: 123-449
Cow position: chr21:42384379-42384708 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 221
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 126

Conread position: 123-450
Cow position: chr21:27624585-27624897 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 226
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 16

Conread position: 123-450
Cow position: chr21:29484857-29485176 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 37

Conread position: 123-457
Cow position: chr21:13365218-13365551 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 228
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 120, 39

Conread position: 123-467
Cow position: chr21:9990386-9990727 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 243
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 24, 105

Conread position: 123-477
Cow position: chr21:22860875-22861218 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 241
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 48, 36

Conread position: 123-477
Cow position: chr21:31691352-31691699 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 250
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 24, 123

Conread position: 123-483
Cow position: chr21:42135750-42135387 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 251
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 23, 124

Conread position: 123-497
Cow position: chr21:7825302-7824941 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 257
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 266, 119

Conread position: 123-500
Cow position: chr21:18800655-18800278 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 263
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 45, 121

Conread position: 123-501
Cow position: chr21:46912-47300 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 249
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 179, 280

Conread position: 123-501
Cow position: chr21:17193886-17193495 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 253
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 44, 127

Conread position: 123-503
Cow position: chr21:20160557-20160933 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 263
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 45, 75

Conread position: 123-503
Cow position: chr21:23822041-23822407 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 262
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 45, 119

Conread position: 123-503
Cow position: chr21:24858185-24858571 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 266
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 24, 119

Conread position: 123-507
Cow position: chr21:24598535-24598902 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 265
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 45, 122

Conread position: 123-509
Cow position: chr21:42007586-42007207 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 249
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 25

Conread position: 123-510
Cow position: chr21:29069455-29069061 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 120

Conread position: 123-511
Cow position: chr21:81944-82322 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 277
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 24, 129

Conread position: 123-511
Cow position: chr21:10263914-10264298 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 258
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 179, 24

Conread position: 123-511
Cow position: chr21:20152821-20153220 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 265
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 44, 127

Conread position: 123-511
Cow position: chr21:20262460-20262084 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 265
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 42, 102

Conread position: 123-511
Cow position: chr21:27229921-27229540 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 269
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 46, 121

Conread position: 123-511
Cow position: chr21:30592430-30592051 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 262
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 46, 115

Conread position: 123-512
Cow position: chr21:3585485-3585100 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 265
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 148, 22

Conread position: 123-512
Cow position: chr21:28244349-28244731 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 251
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 148, 40

Conread position: 123-514
Cow position: chr21:32297637-32297242 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 277
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 21, 125

Conread position: 123-514
Cow position: chr21:34010517-34010130 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 276
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 45, 19

Conread position: 123-514
Cow position: chr21:46264048-46264457 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 288
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 44, 32

Conread position: 123-515
Cow position: chr21:12462097-12461702 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 264
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 19, 119

Conread position: 123-515
Cow position: chr21:29214275-29213892 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 32

Conread position: 123-515
Cow position: chr21:34653955-34654337 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 25

Conread position: 123-515
Cow position: chr21:37299343-37299727 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 74

Conread position: 123-515
Cow position: chr21:41590683-41590299 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 267
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 179, 37

Conread position: 123-516
Cow position: chr21:14464450-14464854 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 265
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 128

Conread position: 123-516
Cow position: chr21:15911274-15911646 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 266
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 25

Conread position: 123-516
Cow position: chr21:38449578-38449183 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 279
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 21, 52

Conread position: 123-517
Cow position: chr21:643207-643589 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 44

Conread position: 123-517
Cow position: chr21:4281994-4281615 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 256
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 24

Conread position: 123-517
Cow position: chr21:6051380-6051774 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 269
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 43, 123

Conread position: 123-517
Cow position: chr21:7673006-7673382 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 266
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 163, 37

Conread position: 123-517
Cow position: chr21:9416116-9416510 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 276
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 22, 126

Conread position: 123-517
Cow position: chr21:20260447-20260027 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 119

Conread position: 123-517
Cow position: chr21:32339863-32339476 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 254
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 44, 19

Conread position: 123-517
Cow position: chr21:38692063-38692464 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 275
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 32

Conread position: 124-265
Cow position: chr21:949794-949659 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 124-301
Cow position: chr21:20192777-20192947 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 124-450
Cow position: chr21:7582035-7581707 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 226
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 24, 123

Conread position: 124-503
Cow position: chr21:30849065-30848693 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 257
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 195, 18

Conread position: 124-513
Cow position: chr21:14452111-14452498 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 260
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 44, 119

Conread position: 124-514
Cow position: chr21:27569286-27568893 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 282
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 27, 88

Conread position: 125-386
Cow position: chr21:33997346-33997091 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 43, 32

Conread position: 126-334
Cow position: chr21:12961020-12960813 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 42, 9

Conread position: 126-376
Cow position: chr21:17856426-17856670 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 39, 11

Conread position: 126-392
Cow position: chr21:18845137-18844870 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 187
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 41, 11

Conread position: 126-513
Cow position: chr21:957550-957933 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 273
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 42, 11

Conread position: 127-293
Cow position: chr21:912089-911923 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 40, 115

Conread position: 130-483
Cow position: chr21:13840202-13840560 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 238
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 37, 117

Conread position: 130-515
Cow position: chr21:44826003-44825608 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 19

Conread position: 133-508
Cow position: chr21:23672630-23673005 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 248
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 35, 77

Conread position: 134-266
Cow position: chr21:4568170-4568301 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 83

Conread position: 134-285
Cow position: chr21:31253428-31253579 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 33, 109

Conread position: 134-294
Cow position: chr21:27810294-27810454 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 8

Conread position: 134-326
Cow position: chr21:21077212-21077402 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 34, 8

Conread position: 134-392
Cow position: chr21:18828420-18828160 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 33, 8

Conread position: 134-441
Cow position: chr21:36297375-36297683 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 215
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 34, 108

Conread position: 135-384
Cow position: chr21:35354420-35354665 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 10

Conread position: 135-444
Cow position: chr21:45921173-45920867 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 208
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 109

Conread position: 136-517
Cow position: chr21:6713639-6713255 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 272
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 84

Conread position: 137-298
Cow position: chr21:43357371-43357211 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 5

Conread position: 137-334
Cow position: chr21:28443485-28443288 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 5

Conread position: 137-393
Cow position: chr21:25382904-25383169 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 61, 5

Conread position: 137-400
Cow position: chr21:1058969-1059225 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 5

Conread position: 137-437
Cow position: chr21:28190921-28191217 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 209
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 31, 5

Conread position: 137-450
Cow position: chr21:5392650-5392339 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 220
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 31, 5

Conread position: 137-500
Cow position: chr21:29002269-29001894 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 264
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 31, 5

Conread position: 137-502
Cow position: chr21:41198518-41198143 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 240
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 5

Conread position: 137-512
Cow position: chr21:30222234-30222606 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 5

Conread position: 137-515
Cow position: chr21:23586769-23587139 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 254
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 30, 5

Conread position: 137-516
Cow position: chr21:32559466-32559103 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 5

Conread position: 137-517
Cow position: chr21:18155681-18155295 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 254
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 30, 5

Conread position: 137-517
Cow position: chr21:41974486-41974098 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 258
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 31, 5

Conread position: 138-469
Cow position: chr21:21169602-21169275 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 214
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 63, 28

Conread position: 138-514
Cow position: chr21:37479849-37480230 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 105

Conread position: 139-379
Cow position: chr21:47067003-47066772 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 18

Conread position: 139-513
Cow position: chr21:23980292-23979914 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 263
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 28, 106

Conread position: 141-266
Cow position: chr21:9998827-9998700 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 104

Conread position: 141-284
Cow position: chr21:14515741-14515886 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 24, 104

Conread position: 142-345
Cow position: chr21:18041955-18041752 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 100

Conread position: 142-393
Cow position: chr21:1591443-1591697 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 168
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 26, 103

Conread position: 142-404
Cow position: chr21:395763-396020 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 183
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 101

Conread position: 142-510
Cow position: chr21:22718884-22718521 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 250
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 63, 28

Conread position: 142-515
Cow position: chr21:38900671-38901030 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 240
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 101

Conread position: 142-517
Cow position: chr21:5898501-5898140 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 250
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 158, 23

Conread position: 143-380
Cow position: chr21:10601480-10601245 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 24, 78

Conread position: 143-516
Cow position: chr21:39403641-39403260 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 258
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 58, 23

Conread position: 144-517
Cow position: chr21:25127499-25127880 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 253
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 54, 14

Conread position: 147-389
Cow position: chr21:22465096-22465330 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 20, 6

Conread position: 149-449
Cow position: chr21:30250290-30250005 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 19, 74

Conread position: 149-517
Cow position: chr21:29978856-29978491 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 236
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 62

Conread position: 150-496
Cow position: chr21:10410120-10410471 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 223
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 47, 95

Conread position: 151-449
Cow position: chr21:26244825-26245113 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 17, 0

Conread position: 151-476
Cow position: chr21:10561682-10561360 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 218
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 16, 94

Conread position: 153-447
Cow position: chr21:36795505-36795800 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 194
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 118, 89

Conread position: 153-515
Cow position: chr21:11740212-11739854 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 58

Conread position: 154-510
Cow position: chr21:44658487-44658823 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 236
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 15, 89

Conread position: 155-288
Cow position: chr21:45375529-45375661 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 12, 44

Conread position: 156-513
Cow position: chr21:45906714-45906356 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 244
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 12, 87

Conread position: 157-389
Cow position: chr21:44515172-44515403 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 55, 71

Conread position: 157-503
Cow position: chr21:30835270-30835621 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 232
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 88

Conread position: 160-503
Cow position: chr21:22210333-22209988 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 221
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 83

Conread position: 161-428
Cow position: chr21:45262899-45262632 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 63, 83

Conread position: 163-410
Cow position: chr21:35899757-35900001 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 167
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 81

Conread position: 164-380
Cow position: chr21:46140957-46141178 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 82

Conread position: 167-517
Cow position: chr21:16152350-16152710 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 235
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 30, 79

Conread position: 172-478
Cow position: chr21:36909858-36910157 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 201
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 72

Conread position: 172-510
Cow position: chr21:16569825-16570151 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 232
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 132, 71

Conread position: 172-517
Cow position: chr21:44214048-44214380 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 239
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 101, 69

Conread position: 173-472
Cow position: chr21:4280747-4280454 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 108, 57

Conread position: 174-511
Cow position: chr21:47719373-47719042 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 237
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 99, 46

Conread position: 174-517
Cow position: chr21:24343339-24342996 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 235
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 25, 71

Conread position: 176-517
Cow position: chr21:40266049-40266393 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 230
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 68

Conread position: 184-515
Cow position: chr21:12339575-12339884 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 225
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 26

Conread position: 185-392
Cow position: chr21:297689-297896 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 5, 45

Conread position: 186-511
Cow position: chr21:8426379-8426706 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 235
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 37, 69

Conread position: 187-509
Cow position: chr21:8349267-8349583 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 224
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 94, 55

Conread position: 198-512
Cow position: chr21:41522457-41522149 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 224
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 227, 47

Conread position: 199-512
Cow position: chr21:28919573-28919267 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 205
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 103, 44

Conread position: 199-517
Cow position: chr21:19060136-19059822 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 221
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 43

Conread position: 203-511
Cow position: chr21:22014142-22014454 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 208
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 71, 40

Conread position: 213-475
Cow position: chr21:29014595-29014334 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 174
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 28

Conread position: 215-516
Cow position: chr21:868958-868651 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 203
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 89, 28

Conread position: 223-510
Cow position: chr21:28030263-28030541 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 79, 20

Conread position: 229-515
Cow position: chr21:742266-742541 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 75, 15

Conread position: 242-514
Cow position: chr21:21615767-21616042 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 192
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 190

Conread position: 262-515
Cow position: chr21:36682334-36682593 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 169
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 274-513
Cow position: chr21:22850945-22851180 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 43

Conread position: 276-511
Cow position: chr21:20163734-20163971 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 15

Conread position: 281-516
Cow position: chr21:16498550-16498783 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 32, 10

Conread position: 289-508
Cow position: chr21:24875390-24875612 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 15, 138

Conread position: 291-517
Cow position: chr21:39393788-39394018 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 13, 136

Conread position: 303-513
Cow position: chr21:40820800-40820586 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 130, 105

Conread position: 309-517
Cow position: chr21:8506487-8506278 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 153, 114

Conread position: 309-517
Cow position: chr21:8509375-8509166 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 153, 114

Conread position: 318-515
Cow position: chr21:15012507-15012698 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 107, 0

Conread position: 343-517
Cow position: chr21:44732950-44732773 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 120, 11

Show alignments to all cow chromosomes.