Cow genome map
| Conread name: | Mixn-0017o11 |
| Conread position: | 84-430 |
| Cow position: | chr23:36309197-36309539 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 41, 65 |
| Conread position: | 100-291 |
| Cow position: | chr23:11434468-11434280 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 20, 49 |
| Conread position: | 110-442 |
| Cow position: | chr23:2488186-2487862 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 40, 107 |
| Conread position: | 111-461 |
| Cow position: | chr23:21445915-21446260 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 13, 72 |
| Conread position: | 115-483 |
| Cow position: | chr23:3394692-3394329 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 32, 8 |
| Conread position: | 115-512 |
| Cow position: | chr23:1337496-1337104 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 265 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 119-283 |
| Cow position: | chr23:1068505-1068341 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 48, 124 |
| Conread position: | 120-393 |
| Cow position: | chr23:25378463-25378728 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 48, 124 |
| Conread position: | 120-511 |
| Cow position: | chr23:2502040-2501655 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 28 |
| Conread position: | 123-264 |
| Cow position: | chr23:221883-222022 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 45, 18 |
| Conread position: | 123-273 |
| Cow position: | chr23:1878059-1877911 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 45, 99 |
| Conread position: | 123-277 |
| Cow position: | chr23:3208807-3208654 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 115 |
| Conread position: | 123-284 |
| Cow position: | chr23:20057055-20056893 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 48 |
| Conread position: | 123-288 |
| Cow position: | chr23:808978-809146 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 123-288 |
| Cow position: | chr23:9595018-9594851 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 45, 85 |
| Conread position: | 123-288 |
| Cow position: | chr23:26632611-26632786 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 19, 124 |
| Conread position: | 123-292 |
| Cow position: | chr23:406349-406191 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 123-326 |
| Cow position: | chr23:14191361-14191569 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 26, 124 |
| Conread position: | 123-334 |
| Cow position: | chr23:15056830-15056619 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 44, 120 |
| Conread position: | 123-380 |
| Cow position: | chr23:4980732-4980478 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 123-386 |
| Cow position: | chr23:6367417-6367685 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 22, 87 |
| Conread position: | 123-389 |
| Cow position: | chr23:16563654-16563916 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 45, 22 |
| Conread position: | 123-393 |
| Cow position: | chr23:10014347-10014611 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 28, 124 |
| Conread position: | 123-393 |
| Cow position: | chr23:27544644-27544909 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 179, 44 |
| Conread position: | 123-400 |
| Cow position: | chr23:19371259-19370986 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 121 |
| Conread position: | 123-408 |
| Cow position: | chr23:39806684-39806966 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 26, 45 |
| Conread position: | 123-411 |
| Cow position: | chr23:11845099-11845375 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 26 |
| Conread position: | 123-428 |
| Cow position: | chr23:1721172-1720866 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 21, 48 |
| Conread position: | 123-437 |
| Cow position: | chr23:24867114-24867435 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 23, 123 |
| Conread position: | 123-442 |
| Cow position: | chr23:6995162-6994854 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 181, 41 |
| Conread position: | 123-442 |
| Cow position: | chr23:10554200-10553880 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 123 |
| Conread position: | 123-444 |
| Cow position: | chr23:5706812-5707124 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 45, 97 |
| Conread position: | 123-448 |
| Cow position: | chr23:29459277-29458965 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 24, 48 |
| Conread position: | 123-449 |
| Cow position: | chr23:1924024-1923702 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 45, 127 |
| Conread position: | 123-450 |
| Cow position: | chr23:1428628-1428946 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 45, 25 |
| Conread position: | 123-450 |
| Cow position: | chr23:5162244-5162566 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 25 |
| Conread position: | 123-453 |
| Cow position: | chr23:14164588-14164255 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 45, 29 |
| Conread position: | 123-457 |
| Cow position: | chr23:11473695-11473358 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 26, 89 |
| Conread position: | 123-459 |
| Cow position: | chr23:1776819-1776496 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 22, 120 |
| Conread position: | 123-461 |
| Cow position: | chr23:39775542-39775872 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 44, 108 |
| Conread position: | 123-472 |
| Cow position: | chr23:21764729-21765073 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 48 |
| Conread position: | 123-478 |
| Cow position: | chr23:21452921-21452567 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 122 |
| Conread position: | 123-482 |
| Cow position: | chr23:16631076-16631442 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 28, 127 |
| Conread position: | 123-483 |
| Cow position: | chr23:6767702-6768080 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 24, 52 |
| Conread position: | 123-495 |
| Cow position: | chr23:9599314-9599674 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 45, 24 |
| Conread position: | 123-503 |
| Cow position: | chr23:344366-343984 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 268 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 24, 124 |
| Conread position: | 123-508 |
| Cow position: | chr23:11129046-11129435 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 59 |
| Conread position: | 123-510 |
| Cow position: | chr23:6172850-6172485 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 45, 106 |
| Conread position: | 123-511 |
| Cow position: | chr23:1883205-1883595 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 121 |
| Conread position: | 123-511 |
| Cow position: | chr23:20744777-20744380 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 272 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 45, 32 |
| Conread position: | 123-512 |
| Cow position: | chr23:24509513-24509887 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 123-512 |
| Cow position: | chr23:40778074-40778466 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 24, 126 |
| Conread position: | 123-513 |
| Cow position: | chr23:18802461-18802063 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 46, 122 |
| Conread position: | 123-513 |
| Cow position: | chr23:29626226-29626630 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 29, 121 |
| Conread position: | 123-513 |
| Cow position: | chr23:29786541-29786139 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 23, 121 |
| Conread position: | 123-515 |
| Cow position: | chr23:4646325-4646713 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 22, 104 |
| Conread position: | 123-515 |
| Cow position: | chr23:8698255-8698631 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 288 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 22, 95 |
| Conread position: | 123-516 |
| Cow position: | chr23:534041-534433 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 84 |
| Conread position: | 123-516 |
| Cow position: | chr23:3967738-3967347 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 46, 21 |
| Conread position: | 123-517 |
| Cow position: | chr23:3247400-3247797 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 44, 19 |
| Conread position: | 123-517 |
| Cow position: | chr23:4579223-4578826 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 8, 99 |
| Conread position: | 123-517 |
| Cow position: | chr23:5426239-5426645 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 126 |
| Conread position: | 123-517 |
| Cow position: | chr23:31493690-31494077 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 181, 39 |
| Conread position: | 123-517 |
| Cow position: | chr23:39813321-39813710 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 179, 40 |
| Conread position: | 123-517 |
| Cow position: | chr23:40789797-40790173 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 259 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 180, 56 |
| Conread position: | 124-511 |
| Cow position: | chr23:33711579-33711964 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 178, 36 |
| Conread position: | 124-517 |
| Cow position: | chr23:16881345-16880962 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 36 |
| Conread position: | 125-445 |
| Cow position: | chr23:18296621-18296939 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 43, 120 |
| Conread position: | 126-301 |
| Cow position: | chr23:1429979-1429810 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 41, 98 |
| Conread position: | 126-450 |
| Cow position: | chr23:1398223-1397898 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 121 |
| Conread position: | 126-483 |
| Cow position: | chr23:34416383-34416735 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 22 |
| Conread position: | 127-510 |
| Cow position: | chr23:3282299-3281909 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 41, 108 |
| Conread position: | 130-512 |
| Cow position: | chr23:39778231-39778600 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 144, 29 |
| Conread position: | 132-438 |
| Cow position: | chr23:7360939-7361232 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 35, 26 |
| Conread position: | 132-501 |
| Cow position: | chr23:7845115-7845480 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 132-514 |
| Cow position: | chr23:6244761-6244398 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 271 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 132-515 |
| Cow position: | chr23:1585563-1585192 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 134-511 |
| Cow position: | chr23:26986447-26986070 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 10 |
| Conread position: | 134-516 |
| Cow position: | chr23:39752942-39753308 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 33, 8 |
| Conread position: | 135-393 |
| Cow position: | chr23:33940331-33940076 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 65 |
| Conread position: | 135-513 |
| Cow position: | chr23:12334035-12334426 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 33, 10 |
| Conread position: | 137-282 |
| Cow position: | chr23:2259769-2259625 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 137-295 |
| Cow position: | chr23:22530587-22530430 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 32, 5 |
| Conread position: | 137-447 |
| Cow position: | chr23:11045314-11045623 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 142, 5 |
| Conread position: | 137-450 |
| Cow position: | chr23:29034144-29034451 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 31, 8 |
| Conread position: | 137-467 |
| Cow position: | chr23:9268420-9268737 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 137-510 |
| Cow position: | chr23:1290124-1290507 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 267 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 146, 5 |
| Conread position: | 137-511 |
| Cow position: | chr23:21788940-21788567 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 137-513 |
| Cow position: | chr23:5451152-5451526 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 7 |
| Conread position: | 137-517 |
| Cow position: | chr23:187005-187387 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 259 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 142-393 |
| Cow position: | chr23:40891196-40891444 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 144, 22 |
| Conread position: | 142-449 |
| Cow position: | chr23:13511567-13511863 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 142-511 |
| Cow position: | chr23:18902216-18901864 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 25, 103 |
| Conread position: | 142-513 |
| Cow position: | chr23:34356468-34356845 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 107 |
| Conread position: | 143-287 |
| Cow position: | chr23:22399237-22399376 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 97 |
| Conread position: | 144-515 |
| Cow position: | chr23:16744380-16744749 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 24, 138 |
| Conread position: | 151-373 |
| Cow position: | chr23:1489891-1490102 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 92 |
| Conread position: | 153-277 |
| Cow position: | chr23:23113871-23113998 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 14, 93 |
| Conread position: | 153-381 |
| Cow position: | chr23:1921385-1921157 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 92 |
| Conread position: | 153-517 |
| Cow position: | chr23:15742934-15743299 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 15, 90 |
| Conread position: | 155-509 |
| Cow position: | chr23:35938191-35938528 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 98, 14 |
| Conread position: | 157-515 |
| Cow position: | chr23:16583069-16582701 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 252 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 11, 93 |
| Conread position: | 160-449 |
| Cow position: | chr23:21502788-21502493 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 8, 74 |
| Conread position: | 161-517 |
| Cow position: | chr23:5436792-5436432 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 5 |
| Conread position: | 166-346 |
| Cow position: | chr23:16664710-16664535 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 116, 59 |
| Conread position: | 166-394 |
| Cow position: | chr23:17404695-17404922 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 136, 76 |
| Conread position: | 166-461 |
| Cow position: | chr23:5540018-5540292 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 136, 37 |
| Conread position: | 167-312 |
| Cow position: | chr23:24809807-24809662 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 129, 9 |
| Conread position: | 167-436 |
| Cow position: | chr23:18286056-18286317 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 118, 14 |
| Conread position: | 167-515 |
| Cow position: | chr23:12363761-12363413 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 75 |
| Conread position: | 172-517 |
| Cow position: | chr23:22414431-22414101 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 132, 30 |
| Conread position: | 177-511 |
| Cow position: | chr23:5732417-5732739 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 237 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 125, 65 |
| Conread position: | 183-457 |
| Cow position: | chr23:16076286-16076023 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 119, 32 |
| Conread position: | 184-509 |
| Cow position: | chr23:5795352-5795676 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 58 |
| Conread position: | 186-517 |
| Cow position: | chr23:1438173-1438486 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 122, 31 |
| Conread position: | 194-517 |
| Cow position: | chr23:3245031-3244707 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 77, 48 |
| Conread position: | 200-427 |
| Cow position: | chr23:1876601-1876827 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 113, 43 |
| Conread position: | 200-513 |
| Cow position: | chr23:1222349-1222037 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 84, 43 |
| Conread position: | 203-503 |
| Cow position: | chr23:11212399-11212698 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 101, 38 |
| Conread position: | 206-499 |
| Cow position: | chr23:15280602-15280305 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 96, 37 |
| Conread position: | 211-509 |
| Cow position: | chr23:10497610-10497896 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 242, 33 |
| Conread position: | 222-516 |
| Cow position: | chr23:20539295-20539586 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 223-512 |
| Cow position: | chr23:3293605-3293892 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 60, 20 |
| Conread position: | 224-505 |
| Cow position: | chr23:17486912-17486631 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 227-517 |
| Cow position: | chr23:14523901-14524205 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 66, 14 |
| Conread position: | 233-510 |
| Cow position: | chr23:5881595-5881320 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 10 |
| Conread position: | 238-450 |
| Cow position: | chr23:35369118-35368906 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 66, 52 |
| Conread position: | 241-512 |
| Cow position: | chr23:35965073-35965352 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 37, 30 |
| Conread position: | 243-517 |
| Cow position: | chr23:1863404-1863668 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 244-515 |
| Cow position: | chr23:1981721-1981467 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 218, 49 |
| Conread position: | 246-512 |
| Cow position: | chr23:24966529-24966258 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 201 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 29, 39 |
| Conread position: | 246-517 |
| Cow position: | chr23:40995107-40995371 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 58, 108 |
| Conread position: | 250-517 |
| Cow position: | chr23:40275605-40275349 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 35, 42 |
| Conread position: | 276-517 |
| Cow position: | chr23:25990473-25990230 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 28, 83 |
| Conread position: | 282-499 |
| Cow position: | chr23:22586850-22587068 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 20, 53 |
| Conread position: | 289-503 |
| Cow position: | chr23:22238845-22238626 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 303-517 |
| Cow position: | chr23:17597418-17597630 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 62, 51 |
| Conread position: | 318-512 |
| Cow position: | chr23:24809431-24809234 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 49, 36 |
| Conread position: | 318-516 |
| Cow position: | chr23:27849003-27849200 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 144, 106 |
| Conread position: | 338-515 |
| Cow position: | chr23:23104460-23104284 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 124, 12 |
Show alignments to all cow chromosomes.