Cow genome map
| Conread name: | Mixn-0017o11 |
| Conread position: | 90-437 |
| Cow position: | chr25:27531493-27531152 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 34, 57 |
| Conread position: | 98-442 |
| Cow position: | chr25:6683279-6682937 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 84 |
| Conread position: | 117-288 |
| Cow position: | chr25:3982846-3983014 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 63, 112 |
| Conread position: | 117-477 |
| Cow position: | chr25:788068-788417 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 12, 31 |
| Conread position: | 120-292 |
| Cow position: | chr25:24405931-24405756 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 122 |
| Conread position: | 120-450 |
| Cow position: | chr25:26238676-26238995 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 48, 123 |
| Conread position: | 122-503 |
| Cow position: | chr25:3992597-3992969 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 24, 103 |
| Conread position: | 123-235 |
| Cow position: | chr25:16389484-16389369 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 123-236 |
| Cow position: | chr25:2110891-2110999 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 13 |
| Conread position: | 123-266 |
| Cow position: | chr25:15319728-15319870 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 45, 120 |
| Conread position: | 123-266 |
| Cow position: | chr25:17712342-17712488 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 123-269 |
| Cow position: | chr25:35110322-35110171 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 125 |
| Conread position: | 123-282 |
| Cow position: | chr25:16001712-16001557 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 123-285 |
| Cow position: | chr25:1735508-1735345 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 24, 86 |
| Conread position: | 123-287 |
| Cow position: | chr25:10365944-10365781 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 122 |
| Conread position: | 123-288 |
| Cow position: | chr25:22297209-22297045 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 46, 19 |
| Conread position: | 123-295 |
| Cow position: | chr25:7329352-7329527 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 25, 119 |
| Conread position: | 123-295 |
| Cow position: | chr25:10137906-10138072 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 76 |
| Conread position: | 123-301 |
| Cow position: | chr25:15694792-15694966 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 44, 24 |
| Conread position: | 123-301 |
| Cow position: | chr25:35340140-35340314 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 45, 84 |
| Conread position: | 123-310 |
| Cow position: | chr25:12204278-12204470 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 78, 45 |
| Conread position: | 123-311 |
| Cow position: | chr25:8347317-8347506 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 71, 25 |
| Conread position: | 123-311 |
| Cow position: | chr25:12899562-12899754 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 123-342 |
| Cow position: | chr25:7800944-7801167 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 24, 105 |
| Conread position: | 123-381 |
| Cow position: | chr25:16714466-16714204 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 127 |
| Conread position: | 123-391 |
| Cow position: | chr25:14196664-14196938 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 123 |
| Conread position: | 123-400 |
| Cow position: | chr25:21895078-21894801 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 44, 119 |
| Conread position: | 123-411 |
| Cow position: | chr25:36036972-36036684 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 45, 119 |
| Conread position: | 123-421 |
| Cow position: | chr25:6961342-6961048 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 45, 7 |
| Conread position: | 123-433 |
| Cow position: | chr25:20133507-20133200 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 123 |
| Conread position: | 123-440 |
| Cow position: | chr25:36761914-36762227 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 52, 45 |
| Conread position: | 123-444 |
| Cow position: | chr25:15254523-15254222 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 45, 93 |
| Conread position: | 123-447 |
| Cow position: | chr25:61465-61779 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 122 |
| Conread position: | 123-449 |
| Cow position: | chr25:12319530-12319218 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 150, 34 |
| Conread position: | 123-449 |
| Cow position: | chr25:22531095-22531412 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 38, 16 |
| Conread position: | 123-449 |
| Cow position: | chr25:34169762-34170079 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 47, 101 |
| Conread position: | 123-457 |
| Cow position: | chr25:6474291-6473948 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 24, 80 |
| Conread position: | 123-458 |
| Cow position: | chr25:17566395-17566731 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 77, 45 |
| Conread position: | 123-461 |
| Cow position: | chr25:28188141-28187804 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 49, 124 |
| Conread position: | 123-461 |
| Cow position: | chr25:33959456-33959108 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 134 |
| Conread position: | 123-462 |
| Cow position: | chr25:10218242-10217905 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 44, 123 |
| Conread position: | 123-496 |
| Cow position: | chr25:11662012-11661648 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 24, 124 |
| Conread position: | 123-499 |
| Cow position: | chr25:40321485-40321111 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 80 |
| Conread position: | 123-503 |
| Cow position: | chr25:16319324-16318961 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 90 |
| Conread position: | 123-504 |
| Cow position: | chr25:23829310-23828940 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 46, 21 |
| Conread position: | 123-511 |
| Cow position: | chr25:11436994-11436627 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 133, 46 |
| Conread position: | 123-511 |
| Cow position: | chr25:14720560-14720929 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 111 |
| Conread position: | 123-511 |
| Cow position: | chr25:19129661-19130051 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 120 |
| Conread position: | 123-511 |
| Cow position: | chr25:19679150-19679549 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 92 |
| Conread position: | 123-511 |
| Cow position: | chr25:20785776-20785390 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 67 |
| Conread position: | 123-511 |
| Cow position: | chr25:22178729-22179107 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 271 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 44, 119 |
| Conread position: | 123-512 |
| Cow position: | chr25:30319641-30319250 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 45, 126 |
| Conread position: | 123-512 |
| Cow position: | chr25:38135556-38135951 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 32 |
| Conread position: | 123-513 |
| Cow position: | chr25:14791560-14791953 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 276 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 22, 122 |
| Conread position: | 123-513 |
| Cow position: | chr25:21193136-21192742 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 130 |
| Conread position: | 123-513 |
| Cow position: | chr25:30279399-30278998 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 62 |
| Conread position: | 123-515 |
| Cow position: | chr25:7216636-7217018 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 277 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 26, 114 |
| Conread position: | 123-515 |
| Cow position: | chr25:12778724-12778360 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 272 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 27, 104 |
| Conread position: | 123-515 |
| Cow position: | chr25:13272377-13272770 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 278 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 24, 93 |
| Conread position: | 123-515 |
| Cow position: | chr25:24572882-24573259 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 45, 36 |
| Conread position: | 123-515 |
| Cow position: | chr25:26090006-26089626 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 278 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 45, 118 |
| Conread position: | 123-515 |
| Cow position: | chr25:40905021-40904627 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 93 |
| Conread position: | 123-516 |
| Cow position: | chr25:11585326-11585731 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 24, 84 |
| Conread position: | 123-516 |
| Cow position: | chr25:14833848-14833466 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 179, 46 |
| Conread position: | 123-516 |
| Cow position: | chr25:21191295-21191679 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 22, 100 |
| Conread position: | 123-516 |
| Cow position: | chr25:35347712-35348108 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 124 |
| Conread position: | 123-517 |
| Cow position: | chr25:1838047-1838446 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 123-517 |
| Cow position: | chr25:7007724-7008123 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 45, 19 |
| Conread position: | 123-517 |
| Cow position: | chr25:20348666-20349077 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 124 |
| Conread position: | 123-517 |
| Cow position: | chr25:21245799-21245390 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 44, 125 |
| Conread position: | 123-517 |
| Cow position: | chr25:24669623-24669249 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 46 |
| Conread position: | 123-517 |
| Cow position: | chr25:26087323-26087721 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 126 |
| Conread position: | 124-278 |
| Cow position: | chr25:6256130-6255973 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 122 |
| Conread position: | 124-288 |
| Cow position: | chr25:8918466-8918303 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 23, 105 |
| Conread position: | 124-389 |
| Cow position: | chr25:17144241-17144501 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 147, 18 |
| Conread position: | 124-392 |
| Cow position: | chr25:11131390-11131660 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 119 |
| Conread position: | 124-392 |
| Cow position: | chr25:25051575-25051302 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 124-509 |
| Cow position: | chr25:17658422-17658807 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 43, 99 |
| Conread position: | 125-339 |
| Cow position: | chr25:9642164-9642381 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 38 |
| Conread position: | 125-513 |
| Cow position: | chr25:36746636-36746249 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 270 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 22, 105 |
| Conread position: | 125-514 |
| Cow position: | chr25:22315011-22315404 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 31 |
| Conread position: | 126-516 |
| Cow position: | chr25:33550322-33550714 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 11 |
| Conread position: | 127-448 |
| Cow position: | chr25:7581616-7581296 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 21, 118 |
| Conread position: | 128-449 |
| Cow position: | chr25:38569647-38569344 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 128-499 |
| Cow position: | chr25:32453580-32453245 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 39, 14 |
| Conread position: | 130-517 |
| Cow position: | chr25:18721295-18720924 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 132-294 |
| Cow position: | chr25:32191491-32191648 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 132-511 |
| Cow position: | chr25:8120598-8120978 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 135-298 |
| Cow position: | chr25:11978879-11978722 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 32, 7 |
| Conread position: | 135-495 |
| Cow position: | chr25:17190924-17190573 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 45, 82 |
| Conread position: | 135-515 |
| Cow position: | chr25:36081697-36082069 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 262 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 35, 108 |
| Conread position: | 136-277 |
| Cow position: | chr25:15440958-15440814 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 137-288 |
| Cow position: | chr25:38972659-38972808 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 32, 7 |
| Conread position: | 137-433 |
| Cow position: | chr25:4681060-4681343 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 137-433 |
| Cow position: | chr25:17975540-17975261 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 137-448 |
| Cow position: | chr25:18905708-18906015 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 30, 5 |
| Conread position: | 137-449 |
| Cow position: | chr25:32277777-32277476 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 31, 154 |
| Conread position: | 137-449 |
| Cow position: | chr25:36017361-36017664 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 30, 24 |
| Conread position: | 137-483 |
| Cow position: | chr25:17342276-17342627 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 137-495 |
| Cow position: | chr25:2624632-2624975 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 5 |
| Conread position: | 137-499 |
| Cow position: | chr25:20023566-20023209 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 32, 5 |
| Conread position: | 137-510 |
| Cow position: | chr25:7641627-7641259 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 257 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 30, 5 |
| Conread position: | 137-514 |
| Cow position: | chr25:20069547-20069913 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 245 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 30, 7 |
| Conread position: | 137-515 |
| Cow position: | chr25:21893163-21893535 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 30, 11 |
| Conread position: | 138-517 |
| Cow position: | chr25:26523788-26524165 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 30, 107 |
| Conread position: | 139-483 |
| Cow position: | chr25:23245185-23244838 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 29, 113 |
| Conread position: | 140-503 |
| Cow position: | chr25:11051355-11051711 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 50, 25 |
| Conread position: | 141-285 |
| Cow position: | chr25:31732906-31732762 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 26, 36 |
| Conread position: | 142-287 |
| Cow position: | chr25:36779323-36779469 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 102 |
| Conread position: | 142-387 |
| Cow position: | chr25:15377155-15377397 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 87 |
| Conread position: | 142-448 |
| Cow position: | chr25:4547889-4547589 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 26, 102 |
| Conread position: | 142-486 |
| Cow position: | chr25:15714712-15715041 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 27, 67 |
| Conread position: | 142-511 |
| Cow position: | chr25:27532846-27532476 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 27, 105 |
| Conread position: | 142-515 |
| Cow position: | chr25:7750281-7750648 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 70 |
| Conread position: | 143-517 |
| Cow position: | chr25:26136996-26136617 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 25, 103 |
| Conread position: | 145-334 |
| Cow position: | chr25:36033270-36033456 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 134, 24 |
| Conread position: | 149-428 |
| Cow position: | chr25:22751172-22750895 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 100, 11 |
| Conread position: | 149-499 |
| Cow position: | chr25:13443575-13443222 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 15, 51 |
| Conread position: | 149-516 |
| Cow position: | chr25:20523394-20523036 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 249 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 98, 25 |
| Conread position: | 151-513 |
| Cow position: | chr25:17991747-17991396 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 17, 86 |
| Conread position: | 151-514 |
| Cow position: | chr25:20007973-20008333 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 253 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 151, 18 |
| Conread position: | 151-515 |
| Cow position: | chr25:41151124-41150763 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 17, 84 |
| Conread position: | 152-515 |
| Cow position: | chr25:26679065-26679428 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 91 |
| Conread position: | 153-511 |
| Cow position: | chr25:4521996-4521644 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 15, 78 |
| Conread position: | 153-515 |
| Cow position: | chr25:2414657-2414998 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 14, 85 |
| Conread position: | 154-295 |
| Cow position: | chr25:26654750-26654889 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 47, 18 |
| Conread position: | 155-325 |
| Cow position: | chr25:11054746-11054913 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 147, 86 |
| Conread position: | 156-514 |
| Cow position: | chr25:7380999-7380637 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 11, 86 |
| Conread position: | 157-285 |
| Cow position: | chr25:35333000-35333131 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 87 |
| Conread position: | 157-447 |
| Cow position: | chr25:38981946-38982222 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 166-512 |
| Cow position: | chr25:30618918-30619267 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 153, 33 |
| Conread position: | 166-515 |
| Cow position: | chr25:21668098-21668449 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 76 |
| Conread position: | 167-512 |
| Cow position: | chr25:12609198-12609541 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 112, 73 |
| Conread position: | 168-517 |
| Cow position: | chr25:5920792-5921151 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 32, 77 |
| Conread position: | 173-511 |
| Cow position: | chr25:34979008-34978660 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 108, 67 |
| Conread position: | 175-384 |
| Cow position: | chr25:24051824-24052034 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 102, 67 |
| Conread position: | 180-411 |
| Cow position: | chr25:14157488-14157720 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 124, 33 |
| Conread position: | 181-514 |
| Cow position: | chr25:12510142-12509821 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 122, 48 |
| Conread position: | 182-515 |
| Cow position: | chr25:4245558-4245866 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 281, 52 |
| Conread position: | 183-375 |
| Cow position: | chr25:7449677-7449859 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 93, 27 |
| Conread position: | 186-517 |
| Cow position: | chr25:18202054-18201726 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 57 |
| Conread position: | 187-517 |
| Cow position: | chr25:4488793-4489106 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 87, 56 |
| Conread position: | 188-515 |
| Cow position: | chr25:33457604-33457926 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 83, 54 |
| Conread position: | 189-515 |
| Cow position: | chr25:9843052-9843382 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 115, 9 |
| Conread position: | 193-376 |
| Cow position: | chr25:26642462-26642647 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 50 |
| Conread position: | 193-516 |
| Cow position: | chr25:33557153-33557468 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 269, 49 |
| Conread position: | 194-477 |
| Cow position: | chr25:36872242-36872523 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 235, 49 |
| Conread position: | 194-503 |
| Cow position: | chr25:19364181-19363871 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 50 |
| Conread position: | 195-500 |
| Cow position: | chr25:11433072-11432766 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 54, 47 |
| Conread position: | 198-400 |
| Cow position: | chr25:14117977-14118175 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 104, 46 |
| Conread position: | 199-502 |
| Cow position: | chr25:17119630-17119932 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 103, 43 |
| Conread position: | 215-444 |
| Cow position: | chr25:36555788-36555560 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 28 |
| Conread position: | 219-513 |
| Cow position: | chr25:7816885-7817184 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 67, 50 |
| Conread position: | 227-503 |
| Cow position: | chr25:7799466-7799741 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 196, 16 |
| Conread position: | 233-449 |
| Cow position: | chr25:40931194-40931404 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 10 |
| Conread position: | 237-450 |
| Cow position: | chr25:23504970-23505184 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 36, 6 |
| Conread position: | 248-517 |
| Cow position: | chr25:1840254-1840525 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 38, 179 |
| Conread position: | 249-501 |
| Cow position: | chr25:26306272-26306016 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 54, 151 |
| Conread position: | 269-517 |
| Cow position: | chr25:28597658-28597401 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 7 |
| Conread position: | 270-514 |
| Cow position: | chr25:13826390-13826631 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 272-515 |
| Cow position: | chr25:22348507-22348257 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 291-516 |
| Cow position: | chr25:18288794-18288568 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 49 |
| Conread position: | 319-517 |
| Cow position: | chr25:11060135-11060338 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 114, 94 |
| Conread position: | 340-515 |
| Cow position: | chr25:24115292-24115114 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 123, 85 |
| Conread position: | 368-517 |
| Cow position: | chr25:21082355-21082203 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 95, 57 |
Show alignments to all cow chromosomes.