Cow genome map
| Conread name: | Mixn-0017o11 |
| Conread position: | 73-389 |
| Cow position: | chr27:30354145-30354463 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 21, 172 |
| Conread position: | 118-295 |
| Cow position: | chr27:20592135-20591955 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 49, 128 |
| Conread position: | 120-512 |
| Cow position: | chr27:4390105-4390501 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 27, 82 |
| Conread position: | 120-514 |
| Cow position: | chr27:27245201-27245608 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 35, 124 |
| Conread position: | 121-483 |
| Cow position: | chr27:26239173-26238812 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 47, 120 |
| Conread position: | 121-513 |
| Cow position: | chr27:1768485-1768862 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 203, 41 |
| Conread position: | 121-514 |
| Cow position: | chr27:20283780-20283398 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 165, 13 |
| Conread position: | 122-517 |
| Cow position: | chr27:427120-426721 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 127 |
| Conread position: | 122-517 |
| Cow position: | chr27:13841518-13841114 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 123-252 |
| Cow position: | chr27:13375885-13376012 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 31 |
| Conread position: | 123-265 |
| Cow position: | chr27:22179651-22179788 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 72, 48 |
| Conread position: | 123-267 |
| Cow position: | chr27:16620138-16619990 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 22, 124 |
| Conread position: | 123-288 |
| Cow position: | chr27:27550601-27550764 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 155, 45 |
| Conread position: | 123-292 |
| Cow position: | chr27:9169498-9169668 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 122 |
| Conread position: | 123-293 |
| Cow position: | chr27:19647795-19647965 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 46, 24 |
| Conread position: | 123-296 |
| Cow position: | chr27:27843846-27844023 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 89 |
| Conread position: | 123-301 |
| Cow position: | chr27:25411373-25411551 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 45, 32 |
| Conread position: | 123-301 |
| Cow position: | chr27:28164264-28164433 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 45, 25 |
| Conread position: | 123-311 |
| Cow position: | chr27:14902502-14902693 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 123-315 |
| Cow position: | chr27:15858944-15859134 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 69 |
| Conread position: | 123-326 |
| Cow position: | chr27:28061618-28061817 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 45, 120 |
| Conread position: | 123-378 |
| Cow position: | chr27:4829661-4829920 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 5, 20 |
| Conread position: | 123-378 |
| Cow position: | chr27:20553863-20553624 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 123-388 |
| Cow position: | chr27:815511-815244 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 45, 21 |
| Conread position: | 123-389 |
| Cow position: | chr27:23472402-23472140 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 114 |
| Conread position: | 123-392 |
| Cow position: | chr27:30551142-30550868 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 37 |
| Conread position: | 123-393 |
| Cow position: | chr27:18593417-18593150 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 24, 114 |
| Conread position: | 123-397 |
| Cow position: | chr27:25380137-25379861 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 126, 46 |
| Conread position: | 123-411 |
| Cow position: | chr27:24014594-24014880 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 45, 115 |
| Conread position: | 123-411 |
| Cow position: | chr27:26151166-26150877 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 167, 118 |
| Conread position: | 123-421 |
| Cow position: | chr27:24321336-24321039 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 27, 126 |
| Conread position: | 123-429 |
| Cow position: | chr27:24477563-24477258 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 124 |
| Conread position: | 123-433 |
| Cow position: | chr27:26413109-26413415 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 179, 44 |
| Conread position: | 123-441 |
| Cow position: | chr27:4673167-4672843 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 41 |
| Conread position: | 123-448 |
| Cow position: | chr27:28271000-28271330 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 44, 127 |
| Conread position: | 123-449 |
| Cow position: | chr27:20795930-20795616 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 123-449 |
| Cow position: | chr27:27038697-27039015 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 45, 25 |
| Conread position: | 123-461 |
| Cow position: | chr27:18739534-18739186 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 47, 124 |
| Conread position: | 123-461 |
| Cow position: | chr27:26959474-26959802 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 45, 15 |
| Conread position: | 123-470 |
| Cow position: | chr27:22418618-22418963 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 24, 67 |
| Conread position: | 123-483 |
| Cow position: | chr27:6500211-6499846 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 22, 128 |
| Conread position: | 123-495 |
| Cow position: | chr27:23891084-23890706 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 256 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 83, 35 |
| Conread position: | 123-497 |
| Cow position: | chr27:19685568-19685939 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 32 |
| Conread position: | 123-500 |
| Cow position: | chr27:6550597-6550227 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 305, 44 |
| Conread position: | 123-500 |
| Cow position: | chr27:12596906-12596550 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 251 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 196, 23 |
| Conread position: | 123-501 |
| Cow position: | chr27:16284619-16284256 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 24, 123 |
| Conread position: | 123-503 |
| Cow position: | chr27:15408897-15409260 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 269 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 45, 88 |
| Conread position: | 123-510 |
| Cow position: | chr27:19718070-19717656 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 32, 122 |
| Conread position: | 123-512 |
| Cow position: | chr27:18544144-18543744 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 72, 123 |
| Conread position: | 123-513 |
| Cow position: | chr27:15668620-15669019 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 124 |
| Conread position: | 123-514 |
| Cow position: | chr27:8629725-8630120 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 269 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 32, 122 |
| Conread position: | 123-514 |
| Cow position: | chr27:21668978-21669353 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 117 |
| Conread position: | 123-515 |
| Cow position: | chr27:14670234-14670627 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 154 |
| Conread position: | 123-515 |
| Cow position: | chr27:15454358-15453966 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 123-515 |
| Cow position: | chr27:22035227-22035618 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 122 |
| Conread position: | 123-515 |
| Cow position: | chr27:24446010-24446385 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 100 |
| Conread position: | 123-516 |
| Cow position: | chr27:28206944-28206556 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 275 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 24, 116 |
| Conread position: | 123-517 |
| Cow position: | chr27:13875881-13875484 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 124 |
| Conread position: | 123-517 |
| Cow position: | chr27:14343321-14343684 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 123-517 |
| Cow position: | chr27:16781011-16780611 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 24, 59 |
| Conread position: | 123-517 |
| Cow position: | chr27:22171445-22171053 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 19 |
| Conread position: | 123-517 |
| Cow position: | chr27:27019954-27020344 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 27, 167 |
| Conread position: | 123-517 |
| Cow position: | chr27:27460425-27460827 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 281 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 24, 126 |
| Conread position: | 124-380 |
| Cow position: | chr27:26427983-26428242 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 26, 124 |
| Conread position: | 124-421 |
| Cow position: | chr27:1123180-1122881 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 123 |
| Conread position: | 124-427 |
| Cow position: | chr27:13252155-13251859 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 21, 122 |
| Conread position: | 124-508 |
| Cow position: | chr27:27632464-27632833 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 36, 88 |
| Conread position: | 124-513 |
| Cow position: | chr27:20828561-20828949 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 44, 82 |
| Conread position: | 125-301 |
| Cow position: | chr27:27040752-27040572 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 42, 123 |
| Conread position: | 125-342 |
| Cow position: | chr27:154513-154291 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 20, 124 |
| Conread position: | 125-503 |
| Cow position: | chr27:16705391-16705018 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 42, 100 |
| Conread position: | 125-503 |
| Cow position: | chr27:26864974-26865343 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 20, 118 |
| Conread position: | 125-510 |
| Cow position: | chr27:31219384-31219031 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 125-515 |
| Cow position: | chr27:17397302-17397698 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 127 |
| Conread position: | 125-515 |
| Cow position: | chr27:27856478-27856092 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 20, 43 |
| Conread position: | 126-392 |
| Cow position: | chr27:4812739-4813005 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 41, 10 |
| Conread position: | 126-438 |
| Cow position: | chr27:17331640-17331337 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 43, 6 |
| Conread position: | 126-513 |
| Cow position: | chr27:28931644-28932047 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 24, 125 |
| Conread position: | 126-515 |
| Cow position: | chr27:22547261-22547635 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 278 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 17, 121 |
| Conread position: | 130-375 |
| Cow position: | chr27:20789240-20789484 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 21 |
| Conread position: | 134-303 |
| Cow position: | chr27:16871785-16871948 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 145, 8 |
| Conread position: | 134-389 |
| Cow position: | chr27:4018-3777 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 8 |
| Conread position: | 134-410 |
| Cow position: | chr27:29312539-29312814 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 134-512 |
| Cow position: | chr27:28496244-28496614 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 29, 8 |
| Conread position: | 134-517 |
| Cow position: | chr27:22513544-22513930 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 61, 8 |
| Conread position: | 135-389 |
| Cow position: | chr27:1498451-1498197 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 33, 108 |
| Conread position: | 135-432 |
| Cow position: | chr27:20641209-20641495 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 135-483 |
| Cow position: | chr27:20067842-20068187 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 20, 98 |
| Conread position: | 135-512 |
| Cow position: | chr27:29493782-29494142 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 265 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 189, 29 |
| Conread position: | 135-513 |
| Cow position: | chr27:20354714-20354355 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 114, 7 |
| Conread position: | 136-460 |
| Cow position: | chr27:26218835-26218522 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 136-514 |
| Cow position: | chr27:22220683-22220304 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 60 |
| Conread position: | 136-517 |
| Cow position: | chr27:26426338-26425974 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 256 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 26, 106 |
| Conread position: | 137-288 |
| Cow position: | chr27:9090674-9090823 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 5 |
| Conread position: | 137-288 |
| Cow position: | chr27:12429535-12429384 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 31, 109 |
| Conread position: | 137-288 |
| Cow position: | chr27:22268632-22268482 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 30, 5 |
| Conread position: | 137-355 |
| Cow position: | chr27:2683016-2683230 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 59, 5 |
| Conread position: | 137-449 |
| Cow position: | chr27:16589585-16589879 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 137-500 |
| Cow position: | chr27:26509029-26509388 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 30, 5 |
| Conread position: | 137-513 |
| Cow position: | chr27:2592679-2592292 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 63, 32 |
| Conread position: | 137-514 |
| Cow position: | chr27:7412510-7412148 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 137-514 |
| Cow position: | chr27:16103936-16103565 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 32 |
| Conread position: | 137-514 |
| Cow position: | chr27:26984470-26984108 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 32, 5 |
| Conread position: | 138-444 |
| Cow position: | chr27:31148892-31148588 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 23, 105 |
| Conread position: | 141-443 |
| Cow position: | chr27:27640867-27641181 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 109 |
| Conread position: | 141-517 |
| Cow position: | chr27:8353601-8353246 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 26, 87 |
| Conread position: | 142-290 |
| Cow position: | chr27:10395134-10395284 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 61, 25 |
| Conread position: | 142-411 |
| Cow position: | chr27:20549581-20549852 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 27, 94 |
| Conread position: | 142-438 |
| Cow position: | chr27:16478214-16478504 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 25, 40 |
| Conread position: | 142-447 |
| Cow position: | chr27:22569897-22569607 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 28, 17 |
| Conread position: | 142-449 |
| Cow position: | chr27:30988921-30988621 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 59, 27 |
| Conread position: | 142-499 |
| Cow position: | chr27:23554196-23554560 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 26, 108 |
| Conread position: | 142-511 |
| Cow position: | chr27:26999292-26999666 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 261 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 142-514 |
| Cow position: | chr27:26643802-26643457 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 155, 27 |
| Conread position: | 142-517 |
| Cow position: | chr27:30890414-30890052 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 101 |
| Conread position: | 143-517 |
| Cow position: | chr27:19388140-19387772 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 100 |
| Conread position: | 144-499 |
| Cow position: | chr27:435357-435001 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 118, 22 |
| Conread position: | 151-290 |
| Cow position: | chr27:4011797-4011655 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 17, 94 |
| Conread position: | 151-503 |
| Cow position: | chr27:19546389-19546756 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 89, 121 |
| Conread position: | 151-517 |
| Cow position: | chr27:11435206-11435576 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 45, 16 |
| Conread position: | 155-400 |
| Cow position: | chr27:16626011-16625770 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 30 |
| Conread position: | 160-497 |
| Cow position: | chr27:27694663-27695004 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 10, 19 |
| Conread position: | 161-513 |
| Cow position: | chr27:11151784-11151427 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 6, 86 |
| Conread position: | 166-411 |
| Cow position: | chr27:29504545-29504790 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 46, 37 |
| Conread position: | 166-510 |
| Cow position: | chr27:22386972-22386646 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 116, 74 |
| Conread position: | 166-516 |
| Cow position: | chr27:23594418-23594071 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 137, 68 |
| Conread position: | 167-477 |
| Cow position: | chr27:20481276-20481562 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 43, 74 |
| Conread position: | 170-376 |
| Cow position: | chr27:30804438-30804237 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 133, 72 |
| Conread position: | 173-422 |
| Cow position: | chr27:20092743-20092986 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 104, 53 |
| Conread position: | 174-515 |
| Cow position: | chr27:23511084-23510728 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 248 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 107, 68 |
| Conread position: | 186-517 |
| Cow position: | chr27:15378396-15378731 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 90, 56 |
| Conread position: | 190-517 |
| Cow position: | chr27:6925167-6924833 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 98, 52 |
| Conread position: | 192-511 |
| Cow position: | chr27:23452537-23452220 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 19, 53 |
| Conread position: | 202-514 |
| Cow position: | chr27:29164831-29164529 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 84, 41 |
| Conread position: | 206-400 |
| Cow position: | chr27:8405763-8405952 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 97, 37 |
| Conread position: | 221-497 |
| Cow position: | chr27:23107854-23108131 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 66, 22 |
| Conread position: | 233-517 |
| Cow position: | chr27:23559995-23560278 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 71, 10 |
| Conread position: | 249-517 |
| Cow position: | chr27:590740-591017 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 48 |
| Conread position: | 250-509 |
| Cow position: | chr27:12459304-12459047 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 40 |
| Conread position: | 254-512 |
| Cow position: | chr27:19509030-19508768 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 50, 172 |
| Conread position: | 257-478 |
| Cow position: | chr27:28478594-28478377 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 19 |
| Conread position: | 285-517 |
| Cow position: | chr27:6106684-6106457 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 287-511 |
| Cow position: | chr27:15002994-15003222 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 17, 150 |
| Conread position: | 291-511 |
| Cow position: | chr27:7343448-7343671 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 13, 119 |
| Conread position: | 295-515 |
| Cow position: | chr27:23957492-23957271 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 8, 34 |
| Conread position: | 314-497 |
| Cow position: | chr27:26504258-26504075 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 148, 39 |
| Conread position: | 318-483 |
| Cow position: | chr27:15859345-15859509 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 143, 35 |
| Conread position: | 318-514 |
| Cow position: | chr27:24223904-24223709 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 31, 45 |
| Conread position: | 318-515 |
| Cow position: | chr27:19576371-19576570 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 144, 105 |
| Conread position: | 340-513 |
| Cow position: | chr27:9253183-9253357 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 120, 85 |
| Conread position: | 343-512 |
| Cow position: | chr27:26087243-26087076 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 119, 82 |
Show alignments to all cow chromosomes.