Cow genome map
| Conread name: | Mixn-0017o11 |
| Conread position: | 103-517 |
| Cow position: | chr29:16609523-16609954 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 286 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 11, 149 |
| Conread position: | 108-517 |
| Cow position: | chr29:25091901-25092308 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 140 |
| Conread position: | 120-457 |
| Cow position: | chr29:32290408-32290749 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 48, 131 |
| Conread position: | 120-511 |
| Cow position: | chr29:31674439-31674829 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 267 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 48, 5 |
| Conread position: | 122-287 |
| Cow position: | chr29:19125151-19125316 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 47, 120 |
| Conread position: | 123-280 |
| Cow position: | chr29:94740-94588 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 72, 45 |
| Conread position: | 123-295 |
| Cow position: | chr29:709314-709137 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 21, 123 |
| Conread position: | 123-295 |
| Cow position: | chr29:3395919-3396086 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 44, 34 |
| Conread position: | 123-295 |
| Cow position: | chr29:3502866-3503034 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 169, 44 |
| Conread position: | 123-298 |
| Cow position: | chr29:8125786-8125607 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 24, 124 |
| Conread position: | 123-386 |
| Cow position: | chr29:26986747-26986999 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 165, 39 |
| Conread position: | 123-387 |
| Cow position: | chr29:10456744-10456494 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 177, 38 |
| Conread position: | 123-389 |
| Cow position: | chr29:5098953-5098693 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 22, 49 |
| Conread position: | 123-389 |
| Cow position: | chr29:24103740-24103468 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 24, 124 |
| Conread position: | 123-393 |
| Cow position: | chr29:41364918-41365186 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 123 |
| Conread position: | 123-411 |
| Cow position: | chr29:2984693-2984985 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 44, 123 |
| Conread position: | 123-411 |
| Cow position: | chr29:43328447-43328739 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 120 |
| Conread position: | 123-427 |
| Cow position: | chr29:20903479-20903179 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 24, 83 |
| Conread position: | 123-428 |
| Cow position: | chr29:26615916-26615605 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 24, 36 |
| Conread position: | 123-437 |
| Cow position: | chr29:36216926-36217233 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 220 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 45, 120 |
| Conread position: | 123-438 |
| Cow position: | chr29:39567496-39567802 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 51, 120 |
| Conread position: | 123-443 |
| Cow position: | chr29:6286349-6286036 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 71, 120 |
| Conread position: | 123-448 |
| Cow position: | chr29:19338788-19339131 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 123-449 |
| Cow position: | chr29:6844821-6844499 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 26, 46 |
| Conread position: | 123-449 |
| Cow position: | chr29:32211251-32210940 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 23, 125 |
| Conread position: | 123-450 |
| Cow position: | chr29:22175499-22175812 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 26, 45 |
| Conread position: | 123-478 |
| Cow position: | chr29:21933304-21932959 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 43 |
| Conread position: | 123-483 |
| Cow position: | chr29:1556741-1557094 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 97 |
| Conread position: | 123-510 |
| Cow position: | chr29:12784146-12783758 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 256 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 45, 37 |
| Conread position: | 123-511 |
| Cow position: | chr29:10838759-10839137 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 273 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 44, 120 |
| Conread position: | 123-511 |
| Cow position: | chr29:17109780-17110151 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 338, 38 |
| Conread position: | 123-511 |
| Cow position: | chr29:28195708-28195335 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 24, 125 |
| Conread position: | 123-511 |
| Cow position: | chr29:31489128-31489522 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 23, 122 |
| Conread position: | 123-513 |
| Cow position: | chr29:14501399-14501795 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 108 |
| Conread position: | 123-513 |
| Cow position: | chr29:45005810-45005433 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 271 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 45, 11 |
| Conread position: | 123-514 |
| Cow position: | chr29:4480367-4479966 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 124 |
| Conread position: | 123-514 |
| Cow position: | chr29:27858600-27858989 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 125 |
| Conread position: | 123-514 |
| Cow position: | chr29:40583606-40583986 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 44, 24 |
| Conread position: | 123-515 |
| Cow position: | chr29:9709507-9709895 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 270 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 45, 36 |
| Conread position: | 123-515 |
| Cow position: | chr29:19949118-19949507 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 287 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 19, 77 |
| Conread position: | 123-515 |
| Cow position: | chr29:35501840-35501463 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 123-515 |
| Cow position: | chr29:36209973-36210352 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 277 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 45, 32 |
| Conread position: | 123-516 |
| Cow position: | chr29:19762081-19762466 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 120 |
| Conread position: | 123-516 |
| Cow position: | chr29:22613236-22613624 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 123-516 |
| Cow position: | chr29:38580784-38581195 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 123-517 |
| Cow position: | chr29:2744463-2744065 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 45, 120 |
| Conread position: | 123-517 |
| Cow position: | chr29:4520144-4520534 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 122 |
| Conread position: | 123-517 |
| Cow position: | chr29:11433931-11434316 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 258 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 44, 118 |
| Conread position: | 123-517 |
| Cow position: | chr29:23844640-23845044 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 83 |
| Conread position: | 123-517 |
| Cow position: | chr29:25737607-25737216 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 32 |
| Conread position: | 124-403 |
| Cow position: | chr29:23984153-23983868 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 21, 126 |
| Conread position: | 124-504 |
| Cow position: | chr29:21443534-21443150 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 43, 123 |
| Conread position: | 124-515 |
| Cow position: | chr29:10818627-10818258 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 121 |
| Conread position: | 124-515 |
| Cow position: | chr29:22162441-22162062 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 31 |
| Conread position: | 125-497 |
| Cow position: | chr29:11646914-11647270 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 239 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 162, 22 |
| Conread position: | 125-517 |
| Cow position: | chr29:6337473-6337854 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 71, 41 |
| Conread position: | 126-269 |
| Cow position: | chr29:4334539-4334681 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 41, 118 |
| Conread position: | 126-281 |
| Cow position: | chr29:4065898-4066053 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 23, 16 |
| Conread position: | 126-507 |
| Cow position: | chr29:24952502-24952881 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 42, 11 |
| Conread position: | 127-498 |
| Cow position: | chr29:13639554-13639184 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 40, 15 |
| Conread position: | 130-512 |
| Cow position: | chr29:31928797-31929185 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 269 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 37, 113 |
| Conread position: | 130-513 |
| Cow position: | chr29:20910885-20910490 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 121 |
| Conread position: | 131-454 |
| Cow position: | chr29:28166396-28166086 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 36, 110 |
| Conread position: | 134-392 |
| Cow position: | chr29:17607241-17607494 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 34, 8 |
| Conread position: | 134-433 |
| Cow position: | chr29:43009260-43008969 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 249, 8 |
| Conread position: | 134-512 |
| Cow position: | chr29:22778357-22777982 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 250 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 33, 8 |
| Conread position: | 134-513 |
| Cow position: | chr29:37618125-37618508 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 24, 110 |
| Conread position: | 136-515 |
| Cow position: | chr29:732444-732812 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 31, 6 |
| Conread position: | 137-288 |
| Cow position: | chr29:19792453-19792299 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 30, 110 |
| Conread position: | 137-294 |
| Cow position: | chr29:21000467-21000620 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 137-306 |
| Cow position: | chr29:28868460-28868629 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 30, 5 |
| Conread position: | 137-346 |
| Cow position: | chr29:28446432-28446219 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 137-404 |
| Cow position: | chr29:10235302-10235046 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 165, 5 |
| Conread position: | 137-444 |
| Cow position: | chr29:5186671-5186365 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 32, 5 |
| Conread position: | 137-450 |
| Cow position: | chr29:27588748-27589055 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 32, 21 |
| Conread position: | 137-488 |
| Cow position: | chr29:3100434-3100093 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 30, 5 |
| Conread position: | 137-503 |
| Cow position: | chr29:5892674-5893036 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 262 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 137-503 |
| Cow position: | chr29:22714900-22714520 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 137-512 |
| Cow position: | chr29:4875069-4874691 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 30, 8 |
| Conread position: | 137-514 |
| Cow position: | chr29:43099918-43099547 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 167, 5 |
| Conread position: | 137-515 |
| Cow position: | chr29:8926631-8926247 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 276 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 31, 67 |
| Conread position: | 137-517 |
| Cow position: | chr29:16657512-16657895 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 30, 5 |
| Conread position: | 137-517 |
| Cow position: | chr29:36530691-36531070 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 5 |
| Conread position: | 141-515 |
| Cow position: | chr29:29769524-29769152 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 262 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 26, 102 |
| Conread position: | 142-389 |
| Cow position: | chr29:40166073-40166317 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 25, 99 |
| Conread position: | 142-393 |
| Cow position: | chr29:24252066-24252312 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 25, 106 |
| Conread position: | 142-394 |
| Cow position: | chr29:13372495-13372743 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 139, 25 |
| Conread position: | 142-400 |
| Cow position: | chr29:44682269-44682019 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 25, 69 |
| Conread position: | 142-404 |
| Cow position: | chr29:27826353-27826608 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 98 |
| Conread position: | 142-428 |
| Cow position: | chr29:9912000-9912287 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 101 |
| Conread position: | 142-514 |
| Cow position: | chr29:32963386-32963724 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 257 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 27, 62 |
| Conread position: | 142-515 |
| Cow position: | chr29:12679986-12680360 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 101 |
| Conread position: | 142-516 |
| Cow position: | chr29:42364187-42363816 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 101 |
| Conread position: | 143-287 |
| Cow position: | chr29:24345621-24345478 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 100 |
| Conread position: | 143-400 |
| Cow position: | chr29:11562447-11562697 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 160, 26 |
| Conread position: | 143-450 |
| Cow position: | chr29:23244051-23243746 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 216 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 24, 101 |
| Conread position: | 144-478 |
| Cow position: | chr29:9718939-9718613 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 24, 79 |
| Conread position: | 144-517 |
| Cow position: | chr29:28197174-28196816 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 144-517 |
| Cow position: | chr29:34773904-34773544 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 99 |
| Conread position: | 151-288 |
| Cow position: | chr29:6925852-6925985 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 151-437 |
| Cow position: | chr29:16309582-16309862 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 151, 18 |
| Conread position: | 151-515 |
| Cow position: | chr29:17296968-17297340 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 248 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 16, 96 |
| Conread position: | 151-516 |
| Cow position: | chr29:10058699-10058340 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 259 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 17, 93 |
| Conread position: | 151-517 |
| Cow position: | chr29:35291927-35292290 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 16, 78 |
| Conread position: | 156-516 |
| Cow position: | chr29:12025629-12025276 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 11, 88 |
| Conread position: | 157-500 |
| Cow position: | chr29:39111472-39111137 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 239 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 10, 86 |
| Conread position: | 160-388 |
| Cow position: | chr29:29314809-29314580 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 8, 83 |
| Conread position: | 165-512 |
| Cow position: | chr29:35084371-35084024 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 33, 78 |
| Conread position: | 166-404 |
| Cow position: | chr29:29176760-29176529 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 166-509 |
| Cow position: | chr29:34745809-34745465 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 12, 77 |
| Conread position: | 167-357 |
| Cow position: | chr29:31594276-31594086 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 123, 77 |
| Conread position: | 168-379 |
| Cow position: | chr29:29795533-29795319 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 30, 77 |
| Conread position: | 168-517 |
| Cow position: | chr29:16272580-16272948 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 32, 78 |
| Conread position: | 174-403 |
| Cow position: | chr29:27329753-27329980 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 128, 68 |
| Conread position: | 176-436 |
| Cow position: | chr29:4002759-4003010 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 128, 51 |
| Conread position: | 184-500 |
| Cow position: | chr29:34359109-34358792 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 97, 55 |
| Conread position: | 198-515 |
| Cow position: | chr29:5063033-5063345 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 265, 17 |
| Conread position: | 202-510 |
| Cow position: | chr29:5046541-5046850 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 101, 42 |
| Conread position: | 204-517 |
| Cow position: | chr29:1007707-1008024 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 38 |
| Conread position: | 204-517 |
| Cow position: | chr29:7624067-7624369 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 78, 29 |
| Conread position: | 210-517 |
| Cow position: | chr29:21665985-21666290 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 102, 10 |
| Conread position: | 213-517 |
| Cow position: | chr29:1614825-1615131 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 74, 30 |
| Conread position: | 214-517 |
| Cow position: | chr29:13028338-13028654 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 116, 29 |
| Conread position: | 215-403 |
| Cow position: | chr29:24578760-24578950 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 42, 28 |
| Conread position: | 228-515 |
| Cow position: | chr29:20770258-20770546 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 58, 15 |
| Conread position: | 237-503 |
| Cow position: | chr29:28840077-28840363 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 67, 6 |
| Conread position: | 242-449 |
| Cow position: | chr29:23220574-23220369 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 34 |
| Conread position: | 242-515 |
| Cow position: | chr29:41112947-41112688 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 241, 46 |
| Conread position: | 249-441 |
| Cow position: | chr29:38978464-38978656 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 55, 134 |
| Conread position: | 249-477 |
| Cow position: | chr29:23825286-23825051 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 19, 185 |
| Conread position: | 249-497 |
| Cow position: | chr29:30548708-30548957 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 54, 177 |
| Conread position: | 262-511 |
| Cow position: | chr29:23155175-23155433 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 284-499 |
| Cow position: | chr29:32197664-32197880 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 20, 140 |
| Conread position: | 292-494 |
| Cow position: | chr29:22723576-22723777 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 12, 134 |
| Conread position: | 297-513 |
| Cow position: | chr29:39038289-39038068 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 338-514 |
| Cow position: | chr29:17282090-17282262 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 124, 56 |
| Conread position: | 350-510 |
| Cow position: | chr29:28066521-28066677 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 354-515 |
| Cow position: | chr29:7414539-7414696 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 14, 72 |
| Conread position: | 364-511 |
| Cow position: | chr29:36357174-36357326 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 364-513 |
| Cow position: | chr29:40112430-40112579 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 98, 61 |
Show alignments to all cow chromosomes.