Cow genome map

Conread name: Mixn-0017o11

Conread position: 108-393
Cow position: chr3:78896425-78896702 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 190
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 35

Conread position: 120-438
Cow position: chr3:55272259-55271947 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 35

Conread position: 120-478
Cow position: chr3:32584942-32585284 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 241
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 154, 31

Conread position: 120-483
Cow position: chr3:74134489-74134851 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 242
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 48, 105

Conread position: 120-499
Cow position: chr3:53046873-53046495 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 261
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 75, 49

Conread position: 120-502
Cow position: chr3:30463382-30463010 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 256
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 47, 88

Conread position: 120-511
Cow position: chr3:7331333-7330963 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 130

Conread position: 120-511
Cow position: chr3:53221798-53222187 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 123

Conread position: 120-517
Cow position: chr3:29596178-29596576 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 269
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 46

Conread position: 120-517
Cow position: chr3:64281152-64280757 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 278
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 26, 129

Conread position: 121-389
Cow position: chr3:65800378-65800636 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 93

Conread position: 121-511
Cow position: chr3:59610939-59610544 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 125

Conread position: 123-225
Cow position: chr3:45221913-45221811 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 19

Conread position: 123-237
Cow position: chr3:22716493-22716379 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 108

Conread position: 123-245
Cow position: chr3:18607156-18607282 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 98

Conread position: 123-266
Cow position: chr3:58383755-58383896 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 114

Conread position: 123-271
Cow position: chr3:39328187-39328330 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 43

Conread position: 123-272
Cow position: chr3:26894448-26894597 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 28, 19

Conread position: 123-274
Cow position: chr3:4031755-4031909 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 122

Conread position: 123-274
Cow position: chr3:42588136-42588295 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 47

Conread position: 123-280
Cow position: chr3:59208601-59208758 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 119

Conread position: 123-283
Cow position: chr3:21341179-21341016 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 19, 47

Conread position: 123-283
Cow position: chr3:83201741-83201579 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 124

Conread position: 123-286
Cow position: chr3:15057811-15057660 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 123-287
Cow position: chr3:31501134-31501301 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 24, 124

Conread position: 123-294
Cow position: chr3:80082031-80081865 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 123-295
Cow position: chr3:39171697-39171524 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 121

Conread position: 123-295
Cow position: chr3:73590212-73590038 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 45, 120

Conread position: 123-306
Cow position: chr3:35283311-35283121 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 24, 175

Conread position: 123-311
Cow position: chr3:29807249-29807439 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 123

Conread position: 123-341
Cow position: chr3:25754823-25755027 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 177, 37

Conread position: 123-381
Cow position: chr3:10347142-10347394 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 120

Conread position: 123-381
Cow position: chr3:22820356-22820614 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 21

Conread position: 123-387
Cow position: chr3:31047163-31046903 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 44, 19

Conread position: 123-393
Cow position: chr3:5096991-5097262 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 32, 44

Conread position: 123-393
Cow position: chr3:34937627-34937899 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 27, 122

Conread position: 123-394
Cow position: chr3:53384496-53384223 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 186
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 22

Conread position: 123-403
Cow position: chr3:83816006-83815723 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 21, 80

Conread position: 123-404
Cow position: chr3:23445103-23444822 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 45, 25

Conread position: 123-421
Cow position: chr3:29887637-29887337 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 206
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 15, 24

Conread position: 123-423
Cow position: chr3:66292392-66292091 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 202
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 122

Conread position: 123-441
Cow position: chr3:56059594-56059912 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 123-441
Cow position: chr3:60265449-60265151 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 220
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 45, 23

Conread position: 123-442
Cow position: chr3:57624254-57624566 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 217
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 45, 36

Conread position: 123-443
Cow position: chr3:67704327-67704651 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 219
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 24, 47

Conread position: 123-444
Cow position: chr3:45534513-45534193 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 223
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 24, 111

Conread position: 123-448
Cow position: chr3:78946050-78945731 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 224
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 23, 84

Conread position: 123-449
Cow position: chr3:12712136-12711806 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 220
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 124

Conread position: 123-449
Cow position: chr3:15752841-15752525 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 227
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 22

Conread position: 123-449
Cow position: chr3:17447821-17447504 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 230
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 46, 61

Conread position: 123-449
Cow position: chr3:70899687-70899999 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 179, 44

Conread position: 123-449
Cow position: chr3:80581458-80581766 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 211
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 25

Conread position: 123-451
Cow position: chr3:48296496-48296811 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 218
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 122

Conread position: 123-457
Cow position: chr3:73443300-73442979 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 45, 119

Conread position: 123-461
Cow position: chr3:31206659-31206999 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 226
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 122

Conread position: 123-461
Cow position: chr3:53572963-53572629 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 217
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 35

Conread position: 123-467
Cow position: chr3:73708835-73709175 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 233
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 44, 76

Conread position: 123-474
Cow position: chr3:70565951-70565599 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 120

Conread position: 123-475
Cow position: chr3:80564747-80565100 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 13

Conread position: 123-476
Cow position: chr3:53150114-53150470 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 63

Conread position: 123-478
Cow position: chr3:26682007-26681675 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 241
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 347, 37

Conread position: 123-483
Cow position: chr3:25944864-25945239 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 239
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 37, 128

Conread position: 123-500
Cow position: chr3:59000959-59000599 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 249
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 45, 25

Conread position: 123-503
Cow position: chr3:26970612-26970978 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 255
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 22, 122

Conread position: 123-503
Cow position: chr3:38863904-38864285 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 267
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 45, 32

Conread position: 123-504
Cow position: chr3:17222357-17221965 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 273
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 10, 20

Conread position: 123-509
Cow position: chr3:10958442-10958071 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 45

Conread position: 123-511
Cow position: chr3:2674816-2675207 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 57

Conread position: 123-511
Cow position: chr3:15158828-15159204 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 265
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 45, 121

Conread position: 123-511
Cow position: chr3:17937052-17936672 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 265
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 20, 102

Conread position: 123-511
Cow position: chr3:61224948-61224574 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 261
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 48

Conread position: 123-511
Cow position: chr3:70609409-70609800 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 116

Conread position: 123-512
Cow position: chr3:14465921-14465539 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 261
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 44, 77

Conread position: 123-512
Cow position: chr3:14552665-14553048 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 250
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 112

Conread position: 123-512
Cow position: chr3:18393597-18393224 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 260
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 45, 28

Conread position: 123-512
Cow position: chr3:55189964-55189574 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 38

Conread position: 123-512
Cow position: chr3:56476469-56476849 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 259
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 44, 32

Conread position: 123-512
Cow position: chr3:78092723-78092335 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 92

Conread position: 123-513
Cow position: chr3:18066921-18067307 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 253
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 26, 121

Conread position: 123-513
Cow position: chr3:51578534-51578147 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 258
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 34, 77

Conread position: 123-513
Cow position: chr3:52652287-52651903 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 261
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 179, 90

Conread position: 123-513
Cow position: chr3:83442094-83441716 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 266
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 22, 37

Conread position: 123-514
Cow position: chr3:48362868-48363247 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 269
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 69

Conread position: 123-514
Cow position: chr3:51234309-51233926 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 260
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 44, 33

Conread position: 123-514
Cow position: chr3:54782224-54781815 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 275
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 148, 38

Conread position: 123-514
Cow position: chr3:57764010-57764391 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 264
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 124

Conread position: 123-515
Cow position: chr3:2506694-2506297 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 274
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 24, 125

Conread position: 123-515
Cow position: chr3:11063165-11063541 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 277
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 25, 125

Conread position: 123-515
Cow position: chr3:26065788-26066166 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 280
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 24, 50

Conread position: 123-515
Cow position: chr3:45881696-45882079 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 275
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 47, 100

Conread position: 123-515
Cow position: chr3:68146049-68145676 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 258
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 78, 25

Conread position: 123-515
Cow position: chr3:74233984-74234360 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 19

Conread position: 123-516
Cow position: chr3:5374120-5374489 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 272
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 49

Conread position: 123-516
Cow position: chr3:29813030-29813406 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 273
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 24, 51

Conread position: 123-516
Cow position: chr3:50768465-50768859 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 124

Conread position: 123-516
Cow position: chr3:59473899-59474300 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 255
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 126

Conread position: 123-516
Cow position: chr3:75479799-75480178 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 272
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 165, 22

Conread position: 123-516
Cow position: chr3:83474534-83474934 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 276
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 181, 65

Conread position: 123-517
Cow position: chr3:210110-210503 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 272
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 77, 26

Conread position: 123-517
Cow position: chr3:525141-525507 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 271
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 158, 41

Conread position: 123-517
Cow position: chr3:3985117-3985498 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 260
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 179, 48

Conread position: 123-517
Cow position: chr3:4461702-4461309 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 271
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 44, 61

Conread position: 123-517
Cow position: chr3:9641351-9641736 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 120

Conread position: 123-517
Cow position: chr3:13353144-13353545 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 124

Conread position: 123-517
Cow position: chr3:16752466-16752073 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 276
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 44, 91

Conread position: 123-517
Cow position: chr3:45211082-45211485 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 265
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 114

Conread position: 123-517
Cow position: chr3:48241408-48241787 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 254
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 145, 44

Conread position: 123-517
Cow position: chr3:54945911-54946303 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 124

Conread position: 123-517
Cow position: chr3:70895833-70896220 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 269
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 124

Conread position: 123-517
Cow position: chr3:71237943-71238333 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 262
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 44, 119

Conread position: 123-517
Cow position: chr3:71497358-71496948 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 271
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 25, 50

Conread position: 123-517
Cow position: chr3:73764409-73764034 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 273
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 45, 111

Conread position: 123-517
Cow position: chr3:79220637-79221034 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 256
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 124

Conread position: 123-517
Cow position: chr3:80740359-80740734 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 265
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 44, 34

Conread position: 124-450
Cow position: chr3:72675875-72676203 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 217
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 37, 124

Conread position: 124-511
Cow position: chr3:28908407-28908041 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 257
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 178, 24

Conread position: 124-515
Cow position: chr3:78076977-78077369 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 111

Conread position: 124-516
Cow position: chr3:44932296-44932692 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 123

Conread position: 124-517
Cow position: chr3:52607971-52608354 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 273
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 23, 122

Conread position: 125-288
Cow position: chr3:8604225-8604063 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 117

Conread position: 125-389
Cow position: chr3:11711741-11712016 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 127

Conread position: 126-378
Cow position: chr3:2198672-2198923 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 117

Conread position: 126-513
Cow position: chr3:53790745-53790365 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 11

Conread position: 127-512
Cow position: chr3:23105575-23105189 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 116

Conread position: 132-325
Cow position: chr3:77496618-77496816 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 10

Conread position: 134-284
Cow position: chr3:23944895-23945045 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 67

Conread position: 134-461
Cow position: chr3:82460979-82461296 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 214
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 66, 14

Conread position: 135-346
Cow position: chr3:5851125-5850921 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 34, 99

Conread position: 135-414
Cow position: chr3:7940757-7940481 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 108

Conread position: 135-517
Cow position: chr3:67698078-67698460 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 258
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 76

Conread position: 136-517
Cow position: chr3:75080571-75080933 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 6

Conread position: 137-277
Cow position: chr3:26960789-26960649 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 5

Conread position: 137-295
Cow position: chr3:9843389-9843543 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 5

Conread position: 137-380
Cow position: chr3:53112975-53113217 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 5

Conread position: 137-381
Cow position: chr3:71430406-71430161 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 168
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 33, 5

Conread position: 137-393
Cow position: chr3:27697177-27696923 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 178
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 30, 5

Conread position: 137-393
Cow position: chr3:73759714-73759462 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 5

Conread position: 137-394
Cow position: chr3:81277897-81277636 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 31, 5

Conread position: 137-411
Cow position: chr3:75711113-75711379 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 31, 8

Conread position: 137-427
Cow position: chr3:62826817-62826530 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 30, 5

Conread position: 137-444
Cow position: chr3:55836023-55835716 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 5

Conread position: 137-449
Cow position: chr3:13507269-13507579 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 153, 32

Conread position: 137-483
Cow position: chr3:65413476-65413130 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 235
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 165, 30

Conread position: 137-511
Cow position: chr3:14601911-14601537 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 260
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 30, 5

Conread position: 137-512
Cow position: chr3:38828568-38828927 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 249
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 5

Conread position: 137-513
Cow position: chr3:25690591-25690977 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 257
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 32, 5

Conread position: 137-516
Cow position: chr3:2396977-2396615 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 268
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 31, 5

Conread position: 137-516
Cow position: chr3:23169264-23168888 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 5

Conread position: 137-517
Cow position: chr3:13302046-13301667 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 255
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 30, 12

Conread position: 137-517
Cow position: chr3:65968960-65969355 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 265
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 31, 5

Conread position: 137-517
Cow position: chr3:68708202-68707841 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 5

Conread position: 137-517
Cow position: chr3:68881310-68880950 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 268
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 31, 5

Conread position: 138-449
Cow position: chr3:49791011-49790699 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 205
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 14

Conread position: 139-512
Cow position: chr3:75853526-75853159 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 244
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 28, 15

Conread position: 141-517
Cow position: chr3:71161603-71161969 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 241
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 19

Conread position: 142-285
Cow position: chr3:66884135-66883990 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 102

Conread position: 142-293
Cow position: chr3:56301538-56301386 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 26, 101

Conread position: 142-378
Cow position: chr3:53588581-53588343 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 157
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 102

Conread position: 142-392
Cow position: chr3:66610037-66609790 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 25, 101

Conread position: 142-403
Cow position: chr3:58969095-58968838 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 102

Conread position: 142-421
Cow position: chr3:45647486-45647763 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 26, 88

Conread position: 142-449
Cow position: chr3:80071930-80072240 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 9, 104

Conread position: 142-450
Cow position: chr3:15506257-15506559 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 26, 102

Conread position: 142-463
Cow position: chr3:49327747-49328065 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 103

Conread position: 142-483
Cow position: chr3:74600922-74601256 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 231
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 162, 28

Conread position: 142-499
Cow position: chr3:60933225-60933581 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 239
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 16

Conread position: 142-499
Cow position: chr3:74079833-74079475 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 101

Conread position: 142-512
Cow position: chr3:39970062-39969687 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 152

Conread position: 142-513
Cow position: chr3:8060933-8061297 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 256
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 25, 101

Conread position: 142-515
Cow position: chr3:30940626-30940984 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 251
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 179, 27

Conread position: 142-517
Cow position: chr3:53739380-53739001 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 241
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 25, 101

Conread position: 142-517
Cow position: chr3:55319097-55318717 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 253
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 75

Conread position: 143-513
Cow position: chr3:53429088-53428741 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 262
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 25, 11

Conread position: 143-517
Cow position: chr3:7337963-7337605 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 262
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 25, 78

Conread position: 144-514
Cow position: chr3:12705738-12705369 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 98

Conread position: 145-511
Cow position: chr3:23408542-23408189 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 30

Conread position: 148-306
Cow position: chr3:27212174-27212332 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 154, 93

Conread position: 148-460
Cow position: chr3:3738300-3738602 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 216
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 68

Conread position: 150-517
Cow position: chr3:71231212-71231579 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 244
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 19

Conread position: 151-310
Cow position: chr3:22924593-22924438 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 92

Conread position: 151-440
Cow position: chr3:116012-116290 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 16, 82

Conread position: 151-449
Cow position: chr3:67930367-67930076 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 200
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 17, 48

Conread position: 151-449
Cow position: chr3:81371462-81371758 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 18, 80

Conread position: 151-464
Cow position: chr3:20678020-20677718 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 17, 91

Conread position: 151-467
Cow position: chr3:1830754-1830445 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 209
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 16, 80

Conread position: 151-483
Cow position: chr3:44101784-44102111 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 222
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 17, 94

Conread position: 151-499
Cow position: chr3:75687624-75687274 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 234
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 93

Conread position: 151-515
Cow position: chr3:18686722-18687080 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 242
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 17, 93

Conread position: 151-517
Cow position: chr3:22232837-22232487 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 250
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 17, 92

Conread position: 152-456
Cow position: chr3:50614453-50614759 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 192
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 90

Conread position: 153-311
Cow position: chr3:61191107-61190951 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 80

Conread position: 153-411
Cow position: chr3:61840095-61840348 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 174
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 149, 45

Conread position: 153-437
Cow position: chr3:4050006-4050290 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 193
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 96

Conread position: 153-483
Cow position: chr3:68627864-68627543 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 15, 73

Conread position: 153-507
Cow position: chr3:75158176-75158526 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 14, 90

Conread position: 153-515
Cow position: chr3:27274348-27274706 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 58

Conread position: 153-517
Cow position: chr3:59597002-59597354 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 23

Conread position: 153-517
Cow position: chr3:77365481-77365111 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 247
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 41, 90

Conread position: 154-515
Cow position: chr3:15052134-15051773 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 89

Conread position: 155-301
Cow position: chr3:34294464-34294320 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 155-513
Cow position: chr3:26981883-26982226 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 238
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 12, 90

Conread position: 157-503
Cow position: chr3:76922842-76922506 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 250
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 11, 86

Conread position: 157-514
Cow position: chr3:70762302-70761945 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 86

Conread position: 157-517
Cow position: chr3:48252705-48253060 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 230
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 86

Conread position: 160-514
Cow position: chr3:54506533-54506884 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 251
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 8, 63

Conread position: 160-516
Cow position: chr3:62046486-62046851 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 241
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 8, 75

Conread position: 160-516
Cow position: chr3:79094223-79093881 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 236
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 121, 82

Conread position: 160-517
Cow position: chr3:36418642-36418306 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 251
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 8, 64

Conread position: 161-457
Cow position: chr3:74242821-74243109 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 205
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 141, 74

Conread position: 161-516
Cow position: chr3:55819572-55819929 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 240
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 6, 85

Conread position: 162-421
Cow position: chr3:59799073-59799331 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 5, 81

Conread position: 162-511
Cow position: chr3:9663345-9662994 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 239
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 36, 74

Conread position: 162-515
Cow position: chr3:60264888-60264543 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 241
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 131, 37

Conread position: 166-445
Cow position: chr3:26874421-26874698 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 47, 15

Conread position: 168-384
Cow position: chr3:55109782-55109567 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 124, 12

Conread position: 169-509
Cow position: chr3:68616491-68616162 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 232
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 112, 59

Conread position: 170-515
Cow position: chr3:76268146-76267794 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 232
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 8

Conread position: 170-516
Cow position: chr3:48073039-48072706 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 40

Conread position: 172-449
Cow position: chr3:50069601-50069874 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 130, 69

Conread position: 174-448
Cow position: chr3:53508460-53508723 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 184
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 254, 69

Conread position: 177-512
Cow position: chr3:77581950-77582282 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 221
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 18, 66

Conread position: 178-512
Cow position: chr3:19585704-19586040 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 64

Conread position: 183-511
Cow position: chr3:55177905-55177576 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 62

Conread position: 183-517
Cow position: chr3:70334117-70333788 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 222
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 62

Conread position: 186-500
Cow position: chr3:79196610-79196927 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 222
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 118, 57

Conread position: 192-445
Cow position: chr3:1785385-1785139 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 167
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 110, 48

Conread position: 194-499
Cow position: chr3:73820511-73820202 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 197
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 108, 49

Conread position: 194-514
Cow position: chr3:73237053-73237361 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 222
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 87, 39

Conread position: 194-515
Cow position: chr3:48900479-48900151 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 213
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 121, 33

Conread position: 195-509
Cow position: chr3:78093524-78093220 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 283, 48

Conread position: 195-517
Cow position: chr3:18426840-18426519 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 215
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 236, 47

Conread position: 203-515
Cow position: chr3:76155855-76156165 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 124, 40

Conread position: 204-517
Cow position: chr3:15954218-15953901 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 202
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 100, 39

Conread position: 210-442
Cow position: chr3:63177353-63177586 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 33

Conread position: 214-515
Cow position: chr3:22221198-22221505 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 207
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 76, 29

Conread position: 215-515
Cow position: chr3:59604730-59605021 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 88, 29

Conread position: 216-512
Cow position: chr3:15951031-15950741 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 208
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 97, 27

Conread position: 216-517
Cow position: chr3:58134807-58134501 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 200
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 88, 25

Conread position: 229-517
Cow position: chr3:31361312-31361604 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 200
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 75, 7

Conread position: 230-512
Cow position: chr3:22165523-22165239 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 58, 13

Conread position: 230-517
Cow position: chr3:3316918-3316627 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 196
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 74, 13

Conread position: 233-472
Cow position: chr3:19626612-19626374 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 48, 10

Conread position: 242-497
Cow position: chr3:18607567-18607824 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 80

Conread position: 242-503
Cow position: chr3:49363020-49363274 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 237, 20

Conread position: 242-511
Cow position: chr3:4548920-4549192 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 35, 194

Conread position: 249-511
Cow position: chr3:71474496-71474232 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 45

Conread position: 249-517
Cow position: chr3:31350193-31349928 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 182
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 27

Conread position: 249-517
Cow position: chr3:69785714-69785439 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 53, 29

Conread position: 254-517
Cow position: chr3:64196741-64197006 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 170

Conread position: 277-516
Cow position: chr3:68004765-68004528 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 162
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 150

Conread position: 291-511
Cow position: chr3:53084036-53083810 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 13, 218

Conread position: 291-512
Cow position: chr3:23132217-23131992 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 142

Conread position: 291-514
Cow position: chr3:75107726-75107950 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 11, 139

Conread position: 292-502
Cow position: chr3:26603602-26603380 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 292-517
Cow position: chr3:5305751-5305984 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 198

Conread position: 309-479
Cow position: chr3:73421522-73421352 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 153, 127

Conread position: 318-515
Cow position: chr3:19788850-19788661 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 144, 107

Conread position: 318-515
Cow position: chr3:67407386-67407188 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 144, 107

Conread position: 338-513
Cow position: chr3:52845556-52845732 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 124, 85

Show alignments to all cow chromosomes.