Cow genome map

Conread name: Mixn-0017o11

Conread position: 89-259
Cow position: chr6:9026331-9026504 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 159

Conread position: 91-513
Cow position: chr6:60819332-60819756 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 279
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 33, 154

Conread position: 117-269
Cow position: chr6:69500168-69500320 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 126

Conread position: 119-346
Cow position: chr6:49410843-49410625 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 183, 23

Conread position: 120-269
Cow position: chr6:415941-416095 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 128

Conread position: 120-450
Cow position: chr6:21869798-21869473 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 217
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 184, 28

Conread position: 120-507
Cow position: chr6:38207649-38207250 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 127

Conread position: 120-515
Cow position: chr6:24468550-24468156 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 128

Conread position: 120-517
Cow position: chr6:15305429-15305816 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 29

Conread position: 121-517
Cow position: chr6:8637123-8637512 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 275
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 47, 122

Conread position: 123-258
Cow position: chr6:389020-389155 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 120

Conread position: 123-266
Cow position: chr6:6098432-6098290 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 106, 47

Conread position: 123-266
Cow position: chr6:62324841-62324986 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 88

Conread position: 123-266
Cow position: chr6:62925143-62925004 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 123-273
Cow position: chr6:2012869-2013019 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 45, 120

Conread position: 123-274
Cow position: chr6:32210777-32210627 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 19

Conread position: 123-277
Cow position: chr6:45160442-45160290 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 123-277
Cow position: chr6:53731371-53731526 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 121

Conread position: 123-280
Cow position: chr6:15923149-15922992 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 120

Conread position: 123-284
Cow position: chr6:9008761-9008600 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 122

Conread position: 123-287
Cow position: chr6:8318314-8318149 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 46, 123

Conread position: 123-287
Cow position: chr6:18968925-18968765 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 25

Conread position: 123-288
Cow position: chr6:12629874-12630040 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 59

Conread position: 123-288
Cow position: chr6:64449239-64449409 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 123

Conread position: 123-291
Cow position: chr6:53519773-53519603 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 55

Conread position: 123-309
Cow position: chr6:16411045-16411226 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 72, 42

Conread position: 123-336
Cow position: chr6:6460389-6460604 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 24, 123

Conread position: 123-351
Cow position: chr6:21542170-21542400 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 120

Conread position: 123-384
Cow position: chr6:25008564-25008829 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 178
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 61

Conread position: 123-387
Cow position: chr6:12543083-12542817 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 120

Conread position: 123-388
Cow position: chr6:56843009-56843268 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 23

Conread position: 123-389
Cow position: chr6:130315-130048 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 24, 122

Conread position: 123-389
Cow position: chr6:21231386-21231639 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 179, 32

Conread position: 123-392
Cow position: chr6:899440-899175 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 44, 119

Conread position: 123-393
Cow position: chr6:38218522-38218785 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 44, 67

Conread position: 123-393
Cow position: chr6:49002875-49002621 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 25

Conread position: 123-394
Cow position: chr6:55763704-55763974 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 184
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 44, 49

Conread position: 123-400
Cow position: chr6:23248113-23247840 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 105

Conread position: 123-400
Cow position: chr6:60057806-60057529 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 189
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 108

Conread position: 123-411
Cow position: chr6:4864690-4864410 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 188
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 179, 22

Conread position: 123-411
Cow position: chr6:20098114-20097822 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 121

Conread position: 123-421
Cow position: chr6:60350449-60350145 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 127

Conread position: 123-427
Cow position: chr6:66131158-66131457 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 214
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 44, 19

Conread position: 123-428
Cow position: chr6:28977179-28976886 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 207
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 160, 39

Conread position: 123-436
Cow position: chr6:34196298-34195989 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 199
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 28

Conread position: 123-438
Cow position: chr6:36470713-36470398 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 207
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 25

Conread position: 123-439
Cow position: chr6:36652269-36652585 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 201
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 120

Conread position: 123-439
Cow position: chr6:53651891-53652203 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 222
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 32, 106

Conread position: 123-445
Cow position: chr6:38641348-38641664 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 167, 41

Conread position: 123-445
Cow position: chr6:54991152-54990832 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 62

Conread position: 123-448
Cow position: chr6:46570968-46571278 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 218
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 118, 0

Conread position: 123-449
Cow position: chr6:6343276-6343606 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 217
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 141

Conread position: 123-449
Cow position: chr6:16423549-16423879 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 27, 50

Conread position: 123-461
Cow position: chr6:48112054-48112380 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 123-483
Cow position: chr6:8125182-8125537 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 235
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 24

Conread position: 123-496
Cow position: chr6:63720049-63720416 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 257
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 44, 25

Conread position: 123-497
Cow position: chr6:45690743-45690393 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 259
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 18, 118

Conread position: 123-497
Cow position: chr6:47305189-47305567 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 246
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 125

Conread position: 123-497
Cow position: chr6:51835250-51835623 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 257
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 72, 38

Conread position: 123-498
Cow position: chr6:5114197-5113821 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 255
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 121

Conread position: 123-499
Cow position: chr6:54132668-54133038 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 267
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 46, 19

Conread position: 123-500
Cow position: chr6:4383342-4383702 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 265
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 339, 39

Conread position: 123-501
Cow position: chr6:60739865-60740239 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 258
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 44, 123

Conread position: 123-503
Cow position: chr6:36196064-36196433 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 257
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 47, 112

Conread position: 123-503
Cow position: chr6:46465678-46466049 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 25

Conread position: 123-503
Cow position: chr6:49398766-49398398 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 269
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 22, 122

Conread position: 123-509
Cow position: chr6:67950809-67951194 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 273
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 44, 24

Conread position: 123-510
Cow position: chr6:5609590-5609204 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 269
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 44, 100

Conread position: 123-510
Cow position: chr6:10106146-10105745 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 184

Conread position: 123-511
Cow position: chr6:9736790-9736406 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 266
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 24

Conread position: 123-511
Cow position: chr6:44194695-44194317 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 123

Conread position: 123-511
Cow position: chr6:46860318-46859932 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 104

Conread position: 123-511
Cow position: chr6:53460722-53460332 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 119

Conread position: 123-512
Cow position: chr6:20157175-20157575 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 266
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 32, 127

Conread position: 123-512
Cow position: chr6:47574755-47575131 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 274
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 122

Conread position: 123-513
Cow position: chr6:10176453-10176058 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 257
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 128

Conread position: 123-513
Cow position: chr6:47355674-47356067 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 263
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 45, 119

Conread position: 123-513
Cow position: chr6:52478577-52478170 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 133

Conread position: 123-513
Cow position: chr6:57546366-57545988 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 263
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 76

Conread position: 123-514
Cow position: chr6:11246614-11247010 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 261
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 21

Conread position: 123-514
Cow position: chr6:13687961-13687575 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 32

Conread position: 123-514
Cow position: chr6:51581407-51581013 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 123

Conread position: 123-515
Cow position: chr6:23695847-23696237 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 32

Conread position: 123-515
Cow position: chr6:56849868-56850260 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 262
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 148, 25

Conread position: 123-516
Cow position: chr6:120089-120481 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 81

Conread position: 123-516
Cow position: chr6:8965939-8966332 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 85

Conread position: 123-516
Cow position: chr6:17997465-17997073 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 265
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 45, 123

Conread position: 123-516
Cow position: chr6:29484940-29485327 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 110

Conread position: 123-516
Cow position: chr6:31535721-31535329 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 279
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 24, 92

Conread position: 123-516
Cow position: chr6:36202678-36203065 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 100

Conread position: 123-516
Cow position: chr6:44078371-44078759 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 263
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 179, 44

Conread position: 123-516
Cow position: chr6:46557906-46558298 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 272
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 77, 25

Conread position: 123-516
Cow position: chr6:48281845-48282239 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 257
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 119

Conread position: 123-516
Cow position: chr6:49421929-49421552 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 263
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 45, 24

Conread position: 123-517
Cow position: chr6:5095700-5095297 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 266
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 44, 24

Conread position: 123-517
Cow position: chr6:13040303-13040698 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 281
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 23, 104

Conread position: 123-517
Cow position: chr6:21456840-21456432 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 268
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 24, 50

Conread position: 123-517
Cow position: chr6:35181403-35181009 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 260
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 74, 40

Conread position: 123-517
Cow position: chr6:60783720-60784116 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 249
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 86, 43

Conread position: 123-517
Cow position: chr6:64431789-64432178 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 260
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 44, 80

Conread position: 124-393
Cow position: chr6:8788186-8787918 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 177
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 119

Conread position: 124-404
Cow position: chr6:12551117-12551399 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 21, 102

Conread position: 124-483
Cow position: chr6:2547091-2547463 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 119

Conread position: 124-483
Cow position: chr6:26915181-26915536 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 25

Conread position: 124-512
Cow position: chr6:9219124-9219503 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 261
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 84

Conread position: 124-514
Cow position: chr6:32121762-32122137 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 120

Conread position: 124-515
Cow position: chr6:37149044-37149425 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 260
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 77, 43

Conread position: 125-411
Cow position: chr6:47640585-47640295 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 26, 123

Conread position: 125-513
Cow position: chr6:46283146-46282751 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 275
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 44, 23

Conread position: 125-517
Cow position: chr6:14914387-14913989 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 268
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 75, 23

Conread position: 125-517
Cow position: chr6:53024942-53024566 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 265
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 160, 98

Conread position: 126-440
Cow position: chr6:59069769-59069456 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 208
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 11

Conread position: 126-510
Cow position: chr6:34475695-34475320 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 248
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 11

Conread position: 126-513
Cow position: chr6:15937994-15937611 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 259
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 25, 11

Conread position: 126-517
Cow position: chr6:61631754-61631363 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 253
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 41, 11

Conread position: 128-515
Cow position: chr6:50577381-50577758 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 131-450
Cow position: chr6:21234903-21235217 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 209
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 11

Conread position: 132-517
Cow position: chr6:55209415-55209805 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 246
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 35, 114

Conread position: 134-288
Cow position: chr6:24515332-24515179 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 107

Conread position: 134-298
Cow position: chr6:36928514-36928680 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 154

Conread position: 135-294
Cow position: chr6:602955-603114 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 75, 34

Conread position: 136-289
Cow position: chr6:19351291-19351139 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 107

Conread position: 136-450
Cow position: chr6:582404-582099 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 211
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 135, 17

Conread position: 137-288
Cow position: chr6:48344197-48344346 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 7

Conread position: 137-289
Cow position: chr6:17090464-17090617 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 5

Conread position: 137-293
Cow position: chr6:33276906-33277064 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 5

Conread position: 137-400
Cow position: chr6:61608376-61608638 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 5

Conread position: 137-457
Cow position: chr6:6400817-6401131 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 44

Conread position: 137-503
Cow position: chr6:38853789-38853425 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 259
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 31, 8

Conread position: 137-512
Cow position: chr6:17313599-17313978 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 254
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 30, 8

Conread position: 137-512
Cow position: chr6:50984093-50984458 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 249
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 5

Conread position: 137-513
Cow position: chr6:8562585-8562955 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 240
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 5

Conread position: 137-513
Cow position: chr6:15243121-15243502 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 262
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 31, 5

Conread position: 137-513
Cow position: chr6:38640096-38640472 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 5

Conread position: 137-513
Cow position: chr6:45388195-45388560 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 246
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 5

Conread position: 137-515
Cow position: chr6:19264631-19264258 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 15

Conread position: 137-517
Cow position: chr6:40032058-40032424 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 250
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 30, 5

Conread position: 138-392
Cow position: chr6:29210369-29210613 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 164, 29

Conread position: 141-476
Cow position: chr6:57571345-57571679 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 235
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 27, 102

Conread position: 142-291
Cow position: chr6:34031532-34031682 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 98

Conread position: 142-365
Cow position: chr6:12829353-12829134 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 129, 39

Conread position: 142-421
Cow position: chr6:9452900-9452622 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 190
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 99

Conread position: 142-449
Cow position: chr6:1499511-1499821 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 27

Conread position: 142-470
Cow position: chr6:54867385-54867712 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 220
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 54, 25

Conread position: 142-483
Cow position: chr6:52412727-52413070 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 225
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 25, 102

Conread position: 142-514
Cow position: chr6:47519919-47520296 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 100

Conread position: 142-516
Cow position: chr6:26728657-26728300 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 254
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 26, 102

Conread position: 143-295
Cow position: chr6:44984200-44984350 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 25, 15

Conread position: 143-503
Cow position: chr6:24031249-24031594 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 249
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 25, 95

Conread position: 144-517
Cow position: chr6:17414577-17414205 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 86

Conread position: 148-286
Cow position: chr6:10636046-10636187 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 20, 99

Conread position: 148-346
Cow position: chr6:18961641-18961443 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 21, 94

Conread position: 148-346
Cow position: chr6:37376642-37376442 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 16, 88

Conread position: 148-401
Cow position: chr6:15022683-15022420 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 37

Conread position: 150-450
Cow position: chr6:66531941-66531646 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 196
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 147, 15

Conread position: 151-392
Cow position: chr6:66874229-66874469 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 34

Conread position: 151-453
Cow position: chr6:50975936-50976227 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 16, 73

Conread position: 153-450
Cow position: chr6:47799171-47799469 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 195
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 92

Conread position: 153-483
Cow position: chr6:35842530-35842868 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 226
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 14, 95

Conread position: 153-515
Cow position: chr6:32287518-32287874 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 251
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 18, 90

Conread position: 153-517
Cow position: chr6:25615222-25614845 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 27

Conread position: 155-288
Cow position: chr6:54287954-54288091 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 12, 90

Conread position: 156-516
Cow position: chr6:11192583-11192236 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 11, 48

Conread position: 157-427
Cow position: chr6:58597620-58597352 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 12, 84

Conread position: 157-479
Cow position: chr6:21514735-21514402 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 222
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 203

Conread position: 162-515
Cow position: chr6:38771176-38771514 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 234
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 140, 80

Conread position: 166-513
Cow position: chr6:59603313-59602974 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 233
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 122, 54

Conread position: 166-517
Cow position: chr6:16266613-16266974 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 228
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 79

Conread position: 167-515
Cow position: chr6:59718691-59719054 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 243
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 111, 75

Conread position: 167-517
Cow position: chr6:61168670-61169007 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 239
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 271, 56

Conread position: 168-517
Cow position: chr6:54208243-54207887 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 238
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 32, 21

Conread position: 169-516
Cow position: chr6:60274109-60273767 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 246
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 133, 14

Conread position: 172-478
Cow position: chr6:61269209-61269514 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 71

Conread position: 176-404
Cow position: chr6:66375426-66375203 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 126, 66

Conread position: 180-515
Cow position: chr6:37332015-37332354 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 61

Conread position: 193-449
Cow position: chr6:23466108-23465860 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 111, 49

Conread position: 194-512
Cow position: chr6:33509712-33510029 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 216
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 109, 50

Conread position: 194-514
Cow position: chr6:8599927-8600247 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 213
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 197, 49

Conread position: 195-503
Cow position: chr6:22985935-22985631 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 216
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 80, 48

Conread position: 197-511
Cow position: chr6:17068724-17068416 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 212
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 88, 46

Conread position: 198-511
Cow position: chr6:694221-693906 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 222
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 104, 44

Conread position: 204-513
Cow position: chr6:18118120-18117807 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 223
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 79, 39

Conread position: 215-509
Cow position: chr6:9302772-9302486 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 85, 28

Conread position: 215-515
Cow position: chr6:60468180-60468474 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 208
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 87, 28

Conread position: 220-511
Cow position: chr6:60144251-60143960 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 209
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 61, 24

Conread position: 221-511
Cow position: chr6:50504401-50504695 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 195
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 206

Conread position: 226-513
Cow position: chr6:3350973-3351269 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 64, 17

Conread position: 227-411
Cow position: chr6:32853141-32853324 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 10

Conread position: 227-517
Cow position: chr6:2078865-2078571 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 201
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 67, 16

Conread position: 229-514
Cow position: chr6:30023849-30024119 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 189
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 241-515
Cow position: chr6:48097632-48097360 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 40, 7

Conread position: 244-508
Cow position: chr6:49437303-49437567 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 47

Conread position: 249-515
Cow position: chr6:63065800-63066080 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 16, 43

Conread position: 249-515
Cow position: chr6:67451397-67451129 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 36, 43

Conread position: 309-515
Cow position: chr6:23938095-23938294 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 173, 127

Conread position: 318-517
Cow position: chr6:12761323-12761525 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 137
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 144, 59

Conread position: 338-509
Cow position: chr6:38032920-38033095 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 15, 99

Show alignments to all cow chromosomes.