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Cow genome map

           
Conread name:
           
Mixn-0017o11
        

               
Conread position:
               
89-515
               

               
Cow position:
               
chr9:50606699-50607104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 66
               

               
Conread position:
               
110-404
               

               
Cow position:
               
chr9:19493233-19493527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
58, 14
               

               
Conread position:
               
117-274
               

               
Cow position:
               
chr9:42585399-42585563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
49, 132
               

               
Conread position:
               
117-517
               

               
Cow position:
               
chr9:9402958-9403347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
185, 12
               

               
Conread position:
               
118-516
               

               
Cow position:
               
chr9:48628257-48627848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 110
               

               
Conread position:
               
120-274
               

               
Cow position:
               
chr9:37069347-37069502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 124
               

               
Conread position:
               
120-290
               

               
Cow position:
               
chr9:11102593-11102765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 69
               

               
Conread position:
               
120-389
               

               
Cow position:
               
chr9:3070201-3070458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 42
               

               
Conread position:
               
120-394
               

               
Cow position:
               
chr9:35904529-35904797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
182, 47
               

               
Conread position:
               
120-461
               

               
Cow position:
               
chr9:824177-823844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
48, 22
               

               
Conread position:
               
120-500
               

               
Cow position:
               
chr9:42445760-42446145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
77, 47
               

               
Conread position:
               
121-515
               

               
Cow position:
               
chr9:41283248-41282838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 137
               

               
Conread position:
               
123-238
               

               
Cow position:
               
chr9:33823317-33823201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
123-249
               

               
Cow position:
               
chr9:3410988-3410862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 119
               

               
Conread position:
               
123-269
               

               
Cow position:
               
chr9:36999842-36999987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 100
               

               
Conread position:
               
123-280
               

               
Cow position:
               
chr9:22227867-22228021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 42
               

               
Conread position:
               
123-280
               

               
Cow position:
               
chr9:45170950-45171106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
123-288
               

               
Cow position:
               
chr9:32812567-32812399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 124
               

               
Conread position:
               
123-294
               

               
Cow position:
               
chr9:3924835-3924674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
123-295
               

               
Cow position:
               
chr9:50667643-50667470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 121
               

               
Conread position:
               
123-297
               

               
Cow position:
               
chr9:8546537-8546366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
45, 98
               

               
Conread position:
               
123-298
               

               
Cow position:
               
chr9:29034820-29034986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
123-301
               

               
Cow position:
               
chr9:18072898-18073072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
123-301
               

               
Cow position:
               
chr9:28773336-28773164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
45, 24
               

               
Conread position:
               
123-301
               

               
Cow position:
               
chr9:49403971-49403802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
46, 21
               

               
Conread position:
               
123-306
               

               
Cow position:
               
chr9:18002730-18002917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
44, 123
               

               
Conread position:
               
123-310
               

               
Cow position:
               
chr9:31292907-31292721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
45, 119
               

               
Conread position:
               
123-331
               

               
Cow position:
               
chr9:21840294-21840084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 120
               

               
Conread position:
               
123-334
               

               
Cow position:
               
chr9:1712265-1712467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
160, 43
               

               
Conread position:
               
123-370
               

               
Cow position:
               
chr9:35533732-35533980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
123-372
               

               
Cow position:
               
chr9:36827344-36827106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
123-373
               

               
Cow position:
               
chr9:38344113-38343860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
44, 123
               

               
Conread position:
               
123-380
               

               
Cow position:
               
chr9:45756579-45756326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 83
               

               
Conread position:
               
123-389
               

               
Cow position:
               
chr9:22114414-22114681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
123-392
               

               
Cow position:
               
chr9:5763411-5763680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
24, 114
               

               
Conread position:
               
123-394
               

               
Cow position:
               
chr9:23430923-23431199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
27, 122
               

               
Conread position:
               
123-404
               

               
Cow position:
               
chr9:62357312-62357589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 36
               

               
Conread position:
               
123-433
               

               
Cow position:
               
chr9:6879989-6879689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
24, 103
               

               
Conread position:
               
123-435
               

               
Cow position:
               
chr9:32371542-32371843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 120
               

               
Conread position:
               
123-444
               

               
Cow position:
               
chr9:28354737-28354418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
44, 115
               

               
Conread position:
               
123-445
               

               
Cow position:
               
chr9:31078863-31079179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
123-446
               

               
Cow position:
               
chr9:61997376-61997704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 125
               

               
Conread position:
               
123-447
               

               
Cow position:
               
chr9:33940826-33940504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
44, 125
               

               
Conread position:
               
123-448
               

               
Cow position:
               
chr9:50139500-50139182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
44, 23
               

               
Conread position:
               
123-449
               

               
Cow position:
               
chr9:4267761-4268088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 125
               

               
Conread position:
               
123-449
               

               
Cow position:
               
chr9:8288836-8288512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
44, 123
               

               
Conread position:
               
123-449
               

               
Cow position:
               
chr9:18216881-18217203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 110
               

               
Conread position:
               
123-449
               

               
Cow position:
               
chr9:18342942-18342627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
21, 49
               

               
Conread position:
               
123-449
               

               
Cow position:
               
chr9:57896906-57897214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
123-449
               

               
Cow position:
               
chr9:64091907-64091575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
24, 124
               

               
Conread position:
               
123-450
               

               
Cow position:
               
chr9:9461436-9461761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 122
               

               
Conread position:
               
123-450
               

               
Cow position:
               
chr9:51204944-51204621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
24, 125
               

               
Conread position:
               
123-452
               

               
Cow position:
               
chr9:21888388-21888059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
45, 124
               

               
Conread position:
               
123-468
               

               
Cow position:
               
chr9:1729457-1729801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
123-469
               

               
Cow position:
               
chr9:64155637-64155975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 142
               

               
Conread position:
               
123-476
               

               
Cow position:
               
chr9:5327473-5327130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
44, 54
               

               
Conread position:
               
123-476
               

               
Cow position:
               
chr9:44833746-44834097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
69, 122
               

               
Conread position:
               
123-478
               

               
Cow position:
               
chr9:766931-767284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
26, 123
               

               
Conread position:
               
123-478
               

               
Cow position:
               
chr9:17740725-17741075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
24, 124
               

               
Conread position:
               
123-478
               

               
Cow position:
               
chr9:44831836-44832182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
29, 118
               

               
Conread position:
               
123-483
               

               
Cow position:
               
chr9:23388459-23388819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
45, 119
               

               
Conread position:
               
123-495
               

               
Cow position:
               
chr9:29006779-29006405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
123-499
               

               
Cow position:
               
chr9:34957832-34958210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 118
               

               
Conread position:
               
123-502
               

               
Cow position:
               
chr9:9753176-9753563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 37
               

               
Conread position:
               
123-502
               

               
Cow position:
               
chr9:22151868-22152243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
148, 46
               

               
Conread position:
               
123-503
               

               
Cow position:
               
chr9:18381078-18380706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
44, 95
               

               
Conread position:
               
123-503
               

               
Cow position:
               
chr9:55118298-55117920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
123-510
               

               
Cow position:
               
chr9:17871888-17872276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 46
               

               
Conread position:
               
123-512
               

               
Cow position:
               
chr9:21459938-21460324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 77
               

               
Conread position:
               
123-513
               

               
Cow position:
               
chr9:13169449-13169837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 37
               

               
Conread position:
               
123-513
               

               
Cow position:
               
chr9:55256328-55256721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 122
               

               
Conread position:
               
123-514
               

               
Cow position:
               
chr9:5501070-5500691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
161, 37
               

               
Conread position:
               
123-514
               

               
Cow position:
               
chr9:20091258-20090887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
46, 32
               

               
Conread position:
               
123-515
               

               
Cow position:
               
chr9:28747303-28747692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
123-515
               

               
Cow position:
               
chr9:59013116-59013512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
45, 18
               

               
Conread position:
               
123-515
               

               
Cow position:
               
chr9:61303220-61302829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 8
               

               
Conread position:
               
123-516
               

               
Cow position:
               
chr9:28726504-28726904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
145, 43
               

               
Conread position:
               
123-517
               

               
Cow position:
               
chr9:5433854-5433469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
78, 37
               

               
Conread position:
               
123-517
               

               
Cow position:
               
chr9:6192240-6192633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 98
               

               
Conread position:
               
123-517
               

               
Cow position:
               
chr9:8636871-8636502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
45, 55
               

               
Conread position:
               
123-517
               

               
Cow position:
               
chr9:9595735-9596126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 121
               

               
Conread position:
               
123-517
               

               
Cow position:
               
chr9:10118446-10118842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
45, 119
               

               
Conread position:
               
123-517
               

               
Cow position:
               
chr9:13670855-13670460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
25, 115
               

               
Conread position:
               
123-517
               

               
Cow position:
               
chr9:15215462-15215866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 51
               

               
Conread position:
               
123-517
               

               
Cow position:
               
chr9:17799849-17799459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 53
               

               
Conread position:
               
123-517
               

               
Cow position:
               
chr9:30477565-30477949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
100, 44
               

               
Conread position:
               
123-517
               

               
Cow position:
               
chr9:33598200-33597797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
44, 123
               

               
Conread position:
               
123-517
               

               
Cow position:
               
chr9:36490676-36491080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
44, 32
               

               
Conread position:
               
123-517
               

               
Cow position:
               
chr9:45141386-45141772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 65
               

               
Conread position:
               
123-517
               

               
Cow position:
               
chr9:51620655-51620268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 56
               

               
Conread position:
               
124-279
               

               
Cow position:
               
chr9:38875356-38875514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
27, 122
               

               
Conread position:
               
124-289
               

               
Cow position:
               
chr9:38961220-38961382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 23
               

               
Conread position:
               
124-427
               

               
Cow position:
               
chr9:5218961-5219256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
180, 36
               

               
Conread position:
               
124-449
               

               
Cow position:
               
chr9:11319414-11319740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
22, 120
               

               
Conread position:
               
124-473
               

               
Cow position:
               
chr9:52578315-52578668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
25, 107
               

               
Conread position:
               
124-494
               

               
Cow position:
               
chr9:13205350-13205720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
43, 105
               

               
Conread position:
               
124-498
               

               
Cow position:
               
chr9:30402202-30402586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
58, 44
               

               
Conread position:
               
124-510
               

               
Cow position:
               
chr9:31347172-31346780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
46, 76
               

               
Conread position:
               
124-512
               

               
Cow position:
               
chr9:45285313-45285710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 66
               

               
Conread position:
               
124-514
               

               
Cow position:
               
chr9:56453550-56453173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
23, 123
               

               
Conread position:
               
124-515
               

               
Cow position:
               
chr9:9516552-9516922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
43, 56
               

               
Conread position:
               
124-517
               

               
Cow position:
               
chr9:33218734-33219132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
44, 109
               

               
Conread position:
               
124-517
               

               
Cow position:
               
chr9:54681720-54681345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
70, 55
               

               
Conread position:
               
125-449
               

               
Cow position:
               
chr9:1938343-1938018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
73, 23
               

               
Conread position:
               
125-449
               

               
Cow position:
               
chr9:36445840-36445510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
126-285
               

               
Cow position:
               
chr9:4128568-4128728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 117
               

               
Conread position:
               
126-301
               

               
Cow position:
               
chr9:30195429-30195257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 101
               

               
Conread position:
               
126-477
               

               
Cow position:
               
chr9:9552303-9551958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 73
               

               
Conread position:
               
126-495
               

               
Cow position:
               
chr9:33119666-33120042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 122
               

               
Conread position:
               
126-517
               

               
Cow position:
               
chr9:9199568-9199947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
42, 87
               

               
Conread position:
               
127-293
               

               
Cow position:
               
chr9:1952054-1952219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
41, 116
               

               
Conread position:
               
127-420
               

               
Cow position:
               
chr9:46316573-46316858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
127-503
               

               
Cow position:
               
chr9:11123277-11123642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
175, 21
               

               
Conread position:
               
128-388
               

               
Cow position:
               
chr9:5509933-5509679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
174, 14
               

               
Conread position:
               
130-394
               

               
Cow position:
               
chr9:30652496-30652761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
130-514
               

               
Cow position:
               
chr9:61022820-61022448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
141, 38
               

               
Conread position:
               
134-281
               

               
Cow position:
               
chr9:53608188-53608334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
134-298
               

               
Cow position:
               
chr9:22361218-22361060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
134-502
               

               
Cow position:
               
chr9:9815621-9815252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
66, 32
               

               
Conread position:
               
134-512
               

               
Cow position:
               
chr9:32676889-32676506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
134-517
               

               
Cow position:
               
chr9:34374725-34375103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
135-301
               

               
Cow position:
               
chr9:60037859-60037693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
137-301
               

               
Cow position:
               
chr9:4928831-4928668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 5
               

               
Conread position:
               
137-301
               

               
Cow position:
               
chr9:41652989-41652829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
31, 5
               

               
Conread position:
               
137-461
               

               
Cow position:
               
chr9:6840211-6839876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
30, 5
               

               
Conread position:
               
137-497
               

               
Cow position:
               
chr9:55287694-55288045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 5
               

               
Conread position:
               
137-503
               

               
Cow position:
               
chr9:20848136-20847784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
33, 106
               

               
Conread position:
               
137-513
               

               
Cow position:
               
chr9:38793218-38792843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
32, 105
               

               
Conread position:
               
137-516
               

               
Cow position:
               
chr9:58979601-58979229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
33, 5
               

               
Conread position:
               
137-517
               

               
Cow position:
               
chr9:19067982-19067593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 5
               

               
Conread position:
               
137-517
               

               
Cow position:
               
chr9:27279518-27279130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
30, 5
               

               
Conread position:
               
137-517
               

               
Cow position:
               
chr9:55795958-55795582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
138, 5
               

               
Conread position:
               
138-449
               

               
Cow position:
               
chr9:8563041-8562718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
30, 105
               

               
Conread position:
               
138-512
               

               
Cow position:
               
chr9:44710029-44709662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
30, 106
               

               
Conread position:
               
141-517
               

               
Cow position:
               
chr9:4340969-4341332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 103
               

               
Conread position:
               
142-287
               

               
Cow position:
               
chr9:4861588-4861440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
26, 103
               

               
Conread position:
               
142-400
               

               
Cow position:
               
chr9:7634472-7634214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
160, 100
               

               
Conread position:
               
142-449
               

               
Cow position:
               
chr9:9654113-9654411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
26, 7
               

               
Conread position:
               
142-450
               

               
Cow position:
               
chr9:56773279-56772971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
26, 89
               

               
Conread position:
               
142-457
               

               
Cow position:
               
chr9:3782560-3782252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
25, 102
               

               
Conread position:
               
142-515
               

               
Cow position:
               
chr9:5226968-5227334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
25, 103
               

               
Conread position:
               
142-515
               

               
Cow position:
               
chr9:24887398-24887031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 35
               

               
Conread position:
               
142-515
               

               
Cow position:
               
chr9:34287000-34286624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
142-517
               

               
Cow position:
               
chr9:8998554-8998177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
129, 24
               

               
Conread position:
               
142-517
               

               
Cow position:
               
chr9:11299491-11299849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 101
               

               
Conread position:
               
142-517
               

               
Cow position:
               
chr9:21030512-21030126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 105
               

               
Conread position:
               
142-517
               

               
Cow position:
               
chr9:26278977-26279349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 57
               

               
Conread position:
               
144-449
               

               
Cow position:
               
chr9:17310367-17310666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
127, 42
               

               
Conread position:
               
145-483
               

               
Cow position:
               
chr9:12910202-12910539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 101
               

               
Conread position:
               
147-290
               

               
Cow position:
               
chr9:8525029-8524890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
112, 22
               

               
Conread position:
               
148-445
               

               
Cow position:
               
chr9:3738028-3738324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
149-326
               

               
Cow position:
               
chr9:42509308-42509133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
38, 89
               

               
Conread position:
               
149-505
               

               
Cow position:
               
chr9:62151294-62150947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
18, 80
               

               
Conread position:
               
149-517
               

               
Cow position:
               
chr9:41728448-41728084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 43
               

               
Conread position:
               
151-392
               

               
Cow position:
               
chr9:41679936-41679698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 92
               

               
Conread position:
               
151-503
               

               
Cow position:
               
chr9:30124111-30123768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 92
               

               
Conread position:
               
151-513
               

               
Cow position:
               
chr9:19555565-19555217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
153-321
               

               
Cow position:
               
chr9:34666607-34666442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
14, 78
               

               
Conread position:
               
153-501
               

               
Cow position:
               
chr9:34689414-34689765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
155-449
               

               
Cow position:
               
chr9:9405864-9406157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 87
               

               
Conread position:
               
160-517
               

               
Cow position:
               
chr9:8901042-8901405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
7, 22
               

               
Conread position:
               
161-369
               

               
Cow position:
               
chr9:44921210-44921419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 82
               

               
Conread position:
               
161-517
               

               
Cow position:
               
chr9:11168911-11168569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
6, 83
               

               
Conread position:
               
164-439
               

               
Cow position:
               
chr9:49292967-49293237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
166-450
               

               
Cow position:
               
chr9:62442465-62442183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
31, 22
               

               
Conread position:
               
167-421
               

               
Cow position:
               
chr9:60027371-60027119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
145, 43
               

               
Conread position:
               
167-513
               

               
Cow position:
               
chr9:25557139-25556811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
115, 63
               

               
Conread position:
               
169-510
               

               
Cow position:
               
chr9:60394879-60395218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
133, 73
               

               
Conread position:
               
180-516
               

               
Cow position:
               
chr9:26344808-26345137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
248, 35
               

               
Conread position:
               
184-512
               

               
Cow position:
               
chr9:43757694-43757373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
118, 58
               

               
Conread position:
               
186-514
               

               
Cow position:
               
chr9:39011322-39011640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
118, 52
               

               
Conread position:
               
191-514
               

               
Cow position:
               
chr9:7953049-7952729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
109, 44
               

               
Conread position:
               
192-512
               

               
Cow position:
               
chr9:32669799-32670117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
110, 50
               

               
Conread position:
               
203-441
               

               
Cow position:
               
chr9:6596097-6596328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
101, 40
               

               
Conread position:
               
203-517
               

               
Cow position:
               
chr9:36628241-36627946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
280, 51
               

               
Conread position:
               
206-517
               

               
Cow position:
               
chr9:1877870-1878174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
9, 41
               

               
Conread position:
               
206-517
               

               
Cow position:
               
chr9:33411442-33411747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
118, 37
               

               
Conread position:
               
220-515
               

               
Cow position:
               
chr9:33584562-33584858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
23, 29
               

               
Conread position:
               
227-511
               

               
Cow position:
               
chr9:23955870-23956147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
236, 16
               

               
Conread position:
               
232-449
               

               
Cow position:
               
chr9:32981963-32982185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 11
               

               
Conread position:
               
246-513
               

               
Cow position:
               
chr9:17840579-17840851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 190
               

               
Conread position:
               
249-512
               

               
Cow position:
               
chr9:8628823-8629083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 102
               

               
Conread position:
               
254-517
               

               
Cow position:
               
chr9:34024789-34024523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
31, 38
               

               
Conread position:
               
255-511
               

               
Cow position:
               
chr9:9686327-9686588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 23
               

               
Conread position:
               
272-512
               

               
Cow position:
               
chr9:57131565-57131327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
278-517
               

               
Cow position:
               
chr9:5104343-5104586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
150, 17
               

               
Conread position:
               
318-511
               

               
Cow position:
               
chr9:12773715-12773524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
144, 98
               

               
Conread position:
               
330-513
               

               
Cow position:
               
chr9:40984518-40984332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
133, 94
               

               
Conread position:
               
330-517
               

               
Cow position:
               
chr9:19771375-19771184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
133, 105
               

               
Conread position:
               
330-517
               

               
Cow position:
               
chr9:32052289-32052100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
132, 93
               

               
Conread position:
               
333-503
               

               
Cow position:
               
chr9:48900826-48900997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
128, 147
               
Show alignments to all cow chromosomes.