Cow genome map

Conread name: Mixn-0018b20

Conread position: 158-305
Cow position: chr24:10300025-10300165 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 48

Conread position: 160-297
Cow position: chr24:17752166-17752032 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 160-297
Cow position: chr24:31324230-31324365 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 160-298
Cow position: chr24:352661-352525 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 160-305
Cow position: chr24:18313995-18313844 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 23

Conread position: 160-305
Cow position: chr24:19535311-19535167 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 160-305
Cow position: chr24:24662186-24662042 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 160-305
Cow position: chr24:35150467-35150607 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 160-306
Cow position: chr24:26001332-26001477 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 160-307
Cow position: chr24:11840132-11840277 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 62, 0

Conread position: 160-307
Cow position: chr24:20969717-20969573 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 161-261
Cow position: chr24:32054607-32054706 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 161-293
Cow position: chr24:28045698-28045836 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 161-297
Cow position: chr24:7046803-7046669 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 161-303
Cow position: chr24:18970563-18970421 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 63

Conread position: 161-304
Cow position: chr24:30229419-30229565 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 100, 62

Conread position: 161-305
Cow position: chr24:13587046-13586903 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 62

Conread position: 161-305
Cow position: chr24:18741626-18741483 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 67, 0

Conread position: 161-305
Cow position: chr24:34742698-34742842 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 63

Conread position: 161-305
Cow position: chr24:40404862-40404723 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 161-305
Cow position: chr24:41980713-41980572 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 134, 63

Conread position: 161-306
Cow position: chr24:29389177-29389324 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 62

Conread position: 161-307
Cow position: chr24:42876944-42876800 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 162-287
Cow position: chr24:21894997-21895120 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 162-294
Cow position: chr24:37395264-37395133 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 162-303
Cow position: chr24:15373351-15373492 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 5, 62

Conread position: 162-305
Cow position: chr24:390051-390192 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 162-305
Cow position: chr24:16509917-16510066 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 68

Conread position: 162-305
Cow position: chr24:18331665-18331809 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 21

Conread position: 162-305
Cow position: chr24:34008626-34008484 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 118
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 61, 0

Conread position: 162-305
Cow position: chr24:34496066-34496213 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 121
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 17, 63

Conread position: 162-306
Cow position: chr24:11007407-11007546 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 163-284
Cow position: chr24:19769437-19769557 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 163-303
Cow position: chr24:20801398-20801259 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 163-303
Cow position: chr24:28327131-28326994 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 163-303
Cow position: chr24:28600488-28600345 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 37, 61

Conread position: 163-304
Cow position: chr24:41405838-41405982 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 64

Conread position: 163-305
Cow position: chr24:16268179-16268040 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 163-305
Cow position: chr24:16895183-16895050 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 163-305
Cow position: chr24:27900679-27900816 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 15

Conread position: 163-305
Cow position: chr24:28289305-28289165 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 163-305
Cow position: chr24:32070911-32071050 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 163-305
Cow position: chr24:39523501-39523360 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 60, 0

Conread position: 163-307
Cow position: chr24:43832477-43832621 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 128, 25

Conread position: 166-295
Cow position: chr24:29538560-29538427 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 76, 57

Conread position: 166-296
Cow position: chr24:8886859-8886990 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 59

Conread position: 166-304
Cow position: chr24:43364312-43364445 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 166-305
Cow position: chr24:2992928-2992793 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 166-305
Cow position: chr24:17955493-17955356 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 166-305
Cow position: chr24:27202040-27202177 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 48, 0

Conread position: 166-305
Cow position: chr24:28470729-28470591 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 166-305
Cow position: chr24:33944353-33944490 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 166-305
Cow position: chr24:34390233-34390365 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 54

Conread position: 166-305
Cow position: chr24:43200319-43200187 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 166-306
Cow position: chr24:29170914-29171051 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 167-286
Cow position: chr24:18355161-18355278 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 167-305
Cow position: chr24:16645368-16645230 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 124, 56

Conread position: 167-305
Cow position: chr24:33465666-33465533 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 167-306
Cow position: chr24:814309-814180 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 167-307
Cow position: chr24:16118312-16118451 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 167-307
Cow position: chr24:22647391-22647251 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 58

Conread position: 169-305
Cow position: chr24:22999971-23000103 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 122, 50

Conread position: 169-305
Cow position: chr24:33098519-33098384 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 171-298
Cow position: chr24:2095927-2095800 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 53

Conread position: 171-304
Cow position: chr24:32369963-32369827 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 174-305
Cow position: chr24:19186901-19187026 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 184-305
Cow position: chr24:41566126-41566013 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 185-305
Cow position: chr24:5152493-5152612 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 185-307
Cow position: chr24:26848761-26848642 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 186-304
Cow position: chr24:38841447-38841334 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 187-304
Cow position: chr24:37453532-37453417 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 196-304
Cow position: chr24:28024260-28024367 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 197-305
Cow position: chr24:22235449-22235556 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 200-307
Cow position: chr24:32818315-32818212 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 207-305
Cow position: chr24:39218560-39218463 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 16, 0

Show alignments to all cow chromosomes.