Cow genome map

Conread name: Mixn-0018b20

Conread position: 150-305
Cow position: chr25:34768774-34768623 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 160-268
Cow position: chr25:18988357-18988464 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 94
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 160-296
Cow position: chr25:9349314-9349181 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 127, 48

Conread position: 160-297
Cow position: chr25:1824130-1823994 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 63, 0

Conread position: 160-297
Cow position: chr25:6683095-6682959 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 160-297
Cow position: chr25:36019699-36019566 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 160-304
Cow position: chr25:1838204-1838351 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 67

Conread position: 160-304
Cow position: chr25:22348496-22348353 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 160-305
Cow position: chr25:447298-447150 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 130, 61

Conread position: 160-305
Cow position: chr25:6474120-6473976 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 63, 0

Conread position: 160-305
Cow position: chr25:13272537-13272680 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 160-305
Cow position: chr25:13672361-13672514 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 7, 65

Conread position: 160-305
Cow position: chr25:15463554-15463698 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 138, 63

Conread position: 160-305
Cow position: chr25:21266956-21267098 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 8, 99

Conread position: 160-305
Cow position: chr25:30619031-30619174 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 61, 0

Conread position: 160-305
Cow position: chr25:35090606-35090458 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 10

Conread position: 161-303
Cow position: chr25:12252840-12252700 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 161-303
Cow position: chr25:14196829-14196970 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 38, 64

Conread position: 161-303
Cow position: chr25:23817872-23817731 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 62, 0

Conread position: 161-304
Cow position: chr25:9939288-9939151 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 161-304
Cow position: chr25:30816857-30816999 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 120
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 62, 0

Conread position: 161-305
Cow position: chr25:61618-61761 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 62, 0

Conread position: 161-305
Cow position: chr25:12840755-12840607 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 67

Conread position: 161-305
Cow position: chr25:22730797-22730939 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 123
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 92, 0

Conread position: 161-305
Cow position: chr25:25716618-25716756 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 161-305
Cow position: chr25:26051870-26052013 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 119
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 135, 0

Conread position: 161-305
Cow position: chr25:35109301-35109158 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 62, 0

Conread position: 161-306
Cow position: chr25:7726630-7726773 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 161-307
Cow position: chr25:21501079-21500933 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 61

Conread position: 161-307
Cow position: chr25:22751039-22750894 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 161-307
Cow position: chr25:31762640-31762495 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 62, 0

Conread position: 162-293
Cow position: chr25:21245635-21245505 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 162-296
Cow position: chr25:6687919-6688047 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 162-304
Cow position: chr25:23779361-23779220 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 9

Conread position: 162-305
Cow position: chr25:10504368-10504230 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 162-305
Cow position: chr25:17658579-17658722 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 5, 62

Conread position: 162-305
Cow position: chr25:28187974-28187834 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 122
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 5, 0

Conread position: 162-306
Cow position: chr25:17403453-17403591 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 163-304
Cow position: chr25:26160935-26161079 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 60, 0

Conread position: 163-305
Cow position: chr25:11585488-11585629 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 163-305
Cow position: chr25:11956774-11956915 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 163-305
Cow position: chr25:17704714-17704855 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 163-306
Cow position: chr25:26701000-26701138 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 163-307
Cow position: chr25:9269318-9269456 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 165-307
Cow position: chr25:13503405-13503547 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 120
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 126, 58

Conread position: 166-297
Cow position: chr25:16064865-16064995 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 166-301
Cow position: chr25:30656673-30656542 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 166-304
Cow position: chr25:36081850-36081985 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 166-305
Cow position: chr25:4221630-4221492 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 166-305
Cow position: chr25:12807016-12807149 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 166-305
Cow position: chr25:18905858-18905996 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 166-305
Cow position: chr25:20008105-20008244 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 167-297
Cow position: chr25:5920055-5920183 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 167-305
Cow position: chr25:7581456-7581316 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 94, 8

Conread position: 167-305
Cow position: chr25:9615811-9615948 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 167-305
Cow position: chr25:16867212-16867352 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 88, 56

Conread position: 167-305
Cow position: chr25:17474538-17474402 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 167-305
Cow position: chr25:38982072-38982204 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 168-304
Cow position: chr25:10643334-10643199 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 168-305
Cow position: chr25:21894909-21894774 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 168-307
Cow position: chr25:26072582-26072448 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 169-304
Cow position: chr25:8961748-8961880 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 172-305
Cow position: chr25:15218115-15218243 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 112
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 176-307
Cow position: chr25:7380856-7380726 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 110
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 48, 0

Conread position: 179-305
Cow position: chr25:36555703-36555578 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 180-305
Cow position: chr25:36873069-36872945 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 184-306
Cow position: chr25:18266154-18266276 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 41

Conread position: 194-305
Cow position: chr25:36369820-36369929 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 194-305
Cow position: chr25:36375511-36375620 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 194-307
Cow position: chr25:23323491-23323603 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 0

Show alignments to all cow chromosomes.