Cow genome map

Conread name: Mixn-0018b20

Conread position: 135-305
Cow position: chr29:31981772-31981942 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 28, 89

Conread position: 148-297
Cow position: chr29:396368-396509 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 149-305
Cow position: chr29:4423484-4423328 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 130
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 16, 75

Conread position: 157-305
Cow position: chr29:17804499-17804645 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 158-305
Cow position: chr29:706985-706846 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 67

Conread position: 158-305
Cow position: chr29:22936237-22936382 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 111, 50

Conread position: 159-305
Cow position: chr29:22519160-22519016 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 99, 7

Conread position: 159-305
Cow position: chr29:38858247-38858104 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 160-296
Cow position: chr29:32290576-32290711 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 160-297
Cow position: chr29:26416322-26416454 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 160-298
Cow position: chr29:28775492-28775359 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 160-306
Cow position: chr29:5788995-5789140 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 123
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 10, 64

Conread position: 160-307
Cow position: chr29:463687-463539 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 102, 64

Conread position: 161-296
Cow position: chr29:8686299-8686432 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 6, 0

Conread position: 161-297
Cow position: chr29:11434086-11434222 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 64

Conread position: 161-297
Cow position: chr29:12626008-12625873 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 161-297
Cow position: chr29:30918517-30918652 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 161-298
Cow position: chr29:4520308-4520438 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 161-302
Cow position: chr29:1229576-1229715 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 161-303
Cow position: chr29:32926072-32926213 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 161-305
Cow position: chr29:7310645-7310784 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 161-305
Cow position: chr29:13867242-13867099 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 161-305
Cow position: chr29:22778207-22778062 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 108, 61

Conread position: 161-306
Cow position: chr29:25088713-25088855 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 39

Conread position: 161-307
Cow position: chr29:4085281-4085422 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 161-307
Cow position: chr29:23825638-23825786 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 162-267
Cow position: chr29:2071603-2071496 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 53, 62

Conread position: 162-278
Cow position: chr29:31651380-31651496 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 61

Conread position: 162-297
Cow position: chr29:17154748-17154881 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 113
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 61, 0

Conread position: 162-298
Cow position: chr29:17222382-17222518 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 127, 61

Conread position: 162-302
Cow position: chr29:35292061-35292201 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 70, 62

Conread position: 162-305
Cow position: chr29:2263023-2262884 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 118
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 61, 0

Conread position: 162-305
Cow position: chr29:4120823-4120965 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 162-305
Cow position: chr29:12025498-12025365 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 162-305
Cow position: chr29:13028413-13028551 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 120
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 57, 0

Conread position: 162-305
Cow position: chr29:13373266-13373412 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 67, 60

Conread position: 162-305
Cow position: chr29:13639398-13639255 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 162-305
Cow position: chr29:17409304-17409445 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 162-305
Cow position: chr29:19428628-19428771 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 60

Conread position: 162-305
Cow position: chr29:22175653-22175792 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 162-305
Cow position: chr29:27819188-27819329 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 162-305
Cow position: chr29:40096935-40097073 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 63

Conread position: 162-305
Cow position: chr29:40994921-40994780 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 162-305
Cow position: chr29:42630090-42630230 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 108, 61

Conread position: 162-305
Cow position: chr29:43544633-43544492 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 162-307
Cow position: chr29:41530819-41530962 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 163-301
Cow position: chr29:42886513-42886650 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 163-304
Cow position: chr29:35258955-35259095 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 163-305
Cow position: chr29:1022266-1022406 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 163-305
Cow position: chr29:5210462-5210602 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 163-305
Cow position: chr29:11042402-11042539 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 163-306
Cow position: chr29:5046623-5046765 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 163-306
Cow position: chr29:28195545-28195409 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 163-306
Cow position: chr29:29057149-29057287 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 163-307
Cow position: chr29:9912146-9912288 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 166-292
Cow position: chr29:19559046-19558921 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 166-297
Cow position: chr29:30713736-30713604 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 104, 55

Conread position: 166-305
Cow position: chr29:31934352-31934490 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 166-305
Cow position: chr29:40299047-40298909 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 166-306
Cow position: chr29:6015097-6015238 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 59

Conread position: 166-306
Cow position: chr29:11053886-11053748 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 166-306
Cow position: chr29:26654073-26653932 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 166-306
Cow position: chr29:40583766-40583897 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 166-307
Cow position: chr29:3685546-3685399 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 70, 57

Conread position: 166-307
Cow position: chr29:11647068-11647207 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 167-305
Cow position: chr29:6286187-6286050 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 167-305
Cow position: chr29:6844658-6844521 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 167-305
Cow position: chr29:25333484-25333350 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 167-305
Cow position: chr29:39329629-39329492 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 167-306
Cow position: chr29:12783986-12783852 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 167-307
Cow position: chr29:11397951-11397814 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 167-307
Cow position: chr29:23697951-23698090 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 62, 56

Conread position: 168-284
Cow position: chr29:41365086-41365199 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 169-305
Cow position: chr29:11915803-11915931 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 172-287
Cow position: chr29:40633622-40633735 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 172-305
Cow position: chr29:1220152-1220020 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 172-306
Cow position: chr29:13127143-13127008 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 51

Conread position: 172-307
Cow position: chr29:28979519-28979389 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 173-305
Cow position: chr29:3292928-3293058 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 174-297
Cow position: chr29:11527808-11527689 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 174-305
Cow position: chr29:34760432-34760306 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 178-306
Cow position: chr29:29308587-29308459 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 46

Conread position: 180-304
Cow position: chr29:37046714-37046591 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 43

Conread position: 182-307
Cow position: chr29:12452784-12452908 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 5, 42

Conread position: 187-306
Cow position: chr29:19244465-19244347 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 189-303
Cow position: chr29:24051385-24051273 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 192-297
Cow position: chr29:8634653-8634757 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 194-295
Cow position: chr29:39285496-39285596 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 194-304
Cow position: chr29:19187027-19187136 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 0

Show alignments to all cow chromosomes.