Cow genome map
| Conread name: | Mixn-0018b20 |
| Conread position: | 137-307 |
| Cow position: | chr4:12135985-12135818 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 144 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 55, 18 |
| Conread position: | 141-305 |
| Cow position: | chr4:50676225-50676067 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 144-306 |
| Cow position: | chr4:19456742-19456580 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 29, 80 |
| Conread position: | 149-305 |
| Cow position: | chr4:46136701-46136855 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 154-304 |
| Cow position: | chr4:48321989-48322139 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 89, 69 |
| Conread position: | 158-305 |
| Cow position: | chr4:41301032-41300892 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 158-305 |
| Cow position: | chr4:47510350-47510490 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 159-307 |
| Cow position: | chr4:45367698-45367847 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 10, 66 |
| Conread position: | 160-279 |
| Cow position: | chr4:53346288-53346407 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 160-304 |
| Cow position: | chr4:12004180-12004319 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 134, 59 |
| Conread position: | 160-304 |
| Cow position: | chr4:12591252-12591109 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 160-304 |
| Cow position: | chr4:36731154-36731295 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 160-305 |
| Cow position: | chr4:1495440-1495303 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 160-305 |
| Cow position: | chr4:10056172-10056310 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 160-305 |
| Cow position: | chr4:19322116-19321972 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 160-305 |
| Cow position: | chr4:19408035-19407892 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 160-305 |
| Cow position: | chr4:51920506-51920650 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 160-305 |
| Cow position: | chr4:58248367-58248507 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 160-305 |
| Cow position: | chr4:60719063-60719207 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 160-307 |
| Cow position: | chr4:10732185-10732331 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 160-307 |
| Cow position: | chr4:37732521-37732375 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 161-290 |
| Cow position: | chr4:38999383-38999514 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 161-297 |
| Cow position: | chr4:47305039-47305175 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 7, 63 |
| Conread position: | 161-298 |
| Cow position: | chr4:53126077-53126210 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 161-299 |
| Cow position: | chr4:9825756-9825617 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 114, 61 |
| Conread position: | 161-303 |
| Cow position: | chr4:20142943-20142808 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 161-303 |
| Cow position: | chr4:39458604-39458755 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 103 |
| Conread position: | 161-304 |
| Cow position: | chr4:65175182-65175040 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 161-304 |
| Cow position: | chr4:68764484-68764620 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 161-305 |
| Cow position: | chr4:13974009-13973864 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 11, 64 |
| Conread position: | 161-305 |
| Cow position: | chr4:19542101-19542238 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 161-305 |
| Cow position: | chr4:23847089-23846946 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 161-305 |
| Cow position: | chr4:34369487-34369344 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 102, 62 |
| Conread position: | 161-305 |
| Cow position: | chr4:36893322-36893465 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 161-305 |
| Cow position: | chr4:38946174-38946321 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 36, 55 |
| Conread position: | 161-305 |
| Cow position: | chr4:45583156-45583017 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 161-305 |
| Cow position: | chr4:45662548-45662407 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 82 |
| Conread position: | 161-305 |
| Cow position: | chr4:45775375-45775232 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 161-305 |
| Cow position: | chr4:48173099-48173242 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 161-305 |
| Cow position: | chr4:56570770-56570912 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 161-305 |
| Cow position: | chr4:59377872-59378015 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 161-306 |
| Cow position: | chr4:20147146-20147290 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 161-306 |
| Cow position: | chr4:45234910-45234766 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 161-306 |
| Cow position: | chr4:45874504-45874359 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 8, 59 |
| Conread position: | 161-306 |
| Cow position: | chr4:54171589-54171733 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 161-306 |
| Cow position: | chr4:59785285-59785429 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 161-306 |
| Cow position: | chr4:66547805-66547661 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 161-307 |
| Cow position: | chr4:26400921-26401063 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 162-260 |
| Cow position: | chr4:39231557-39231460 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 162-293 |
| Cow position: | chr4:13142599-13142473 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 162-298 |
| Cow position: | chr4:66256650-66256785 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 100, 61 |
| Conread position: | 162-303 |
| Cow position: | chr4:3268399-3268261 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 162-303 |
| Cow position: | chr4:48902661-48902521 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 162-304 |
| Cow position: | chr4:45563706-45563851 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 162-305 |
| Cow position: | chr4:7704361-7704219 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 162-305 |
| Cow position: | chr4:14500281-14500138 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 8, 60 |
| Conread position: | 162-305 |
| Cow position: | chr4:15462289-15462145 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 162-305 |
| Cow position: | chr4:22101301-22101159 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 127, 61 |
| Conread position: | 162-305 |
| Cow position: | chr4:34383377-34383236 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 132, 53 |
| Conread position: | 162-305 |
| Cow position: | chr4:48104605-48104463 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 162-305 |
| Cow position: | chr4:54921123-54920984 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 127, 57 |
| Conread position: | 162-305 |
| Cow position: | chr4:55395727-55395867 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 162-306 |
| Cow position: | chr4:37502781-37502919 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 162-307 |
| Cow position: | chr4:45706007-45706147 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 163-293 |
| Cow position: | chr4:19430330-19430459 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 163-296 |
| Cow position: | chr4:29291481-29291611 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 163-297 |
| Cow position: | chr4:45074028-45074157 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 163-298 |
| Cow position: | chr4:37691347-37691213 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 163-303 |
| Cow position: | chr4:6653690-6653825 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 163-303 |
| Cow position: | chr4:65650165-65650030 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 163-304 |
| Cow position: | chr4:5460896-5460757 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 163-304 |
| Cow position: | chr4:63349520-63349386 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 163-305 |
| Cow position: | chr4:10968422-10968283 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 163-305 |
| Cow position: | chr4:33181509-33181650 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 163-305 |
| Cow position: | chr4:39128507-39128643 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 88, 56 |
| Conread position: | 163-305 |
| Cow position: | chr4:45636131-45636272 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 163-305 |
| Cow position: | chr4:49794631-49794765 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 163-305 |
| Cow position: | chr4:50687896-50687760 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 163-306 |
| Cow position: | chr4:2602200-2602336 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 163-306 |
| Cow position: | chr4:9444722-9444580 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 163-306 |
| Cow position: | chr4:38350235-38350092 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 104, 60 |
| Conread position: | 163-306 |
| Cow position: | chr4:51784145-51784286 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 163-306 |
| Cow position: | chr4:55508279-55508140 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 163-307 |
| Cow position: | chr4:44184143-44184006 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 137, 20 |
| Conread position: | 164-297 |
| Cow position: | chr4:31348220-31348091 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 166-279 |
| Cow position: | chr4:22345053-22344942 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 34, 58 |
| Conread position: | 166-290 |
| Cow position: | chr4:33395730-33395607 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 166-293 |
| Cow position: | chr4:62771952-62771827 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 166-304 |
| Cow position: | chr4:12560997-12561145 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 166-304 |
| Cow position: | chr4:16594052-16594187 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 166-305 |
| Cow position: | chr4:14020468-14020601 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 166-305 |
| Cow position: | chr4:15236604-15236738 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 166-305 |
| Cow position: | chr4:18756402-18756540 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 94, 61 |
| Conread position: | 166-305 |
| Cow position: | chr4:19098437-19098578 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 166-305 |
| Cow position: | chr4:19708901-19709045 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 30, 63 |
| Conread position: | 166-305 |
| Cow position: | chr4:25879365-25879496 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 166-305 |
| Cow position: | chr4:29805402-29805268 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 166-305 |
| Cow position: | chr4:32726192-32726330 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 166-305 |
| Cow position: | chr4:44773075-44772937 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 166-305 |
| Cow position: | chr4:45738508-45738369 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 18, 58 |
| Conread position: | 166-305 |
| Cow position: | chr4:45862385-45862518 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 166-305 |
| Cow position: | chr4:45910009-45909872 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 166-306 |
| Cow position: | chr4:37935317-37935178 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 166-307 |
| Cow position: | chr4:508941-508801 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 166-307 |
| Cow position: | chr4:9925661-9925521 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 167-304 |
| Cow position: | chr4:20881-21017 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 167-304 |
| Cow position: | chr4:63472106-63471970 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 167-305 |
| Cow position: | chr4:13668653-13668516 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 126, 56 |
| Conread position: | 167-305 |
| Cow position: | chr4:13941429-13941562 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 167-305 |
| Cow position: | chr4:32693756-32693894 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 167-305 |
| Cow position: | chr4:37343096-37343228 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 167-305 |
| Cow position: | chr4:61313244-61313107 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 167-306 |
| Cow position: | chr4:35638934-35638796 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 167-306 |
| Cow position: | chr4:65815736-65815601 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 168-305 |
| Cow position: | chr4:12127669-12127533 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 168-305 |
| Cow position: | chr4:44782345-44782480 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 168-305 |
| Cow position: | chr4:45596062-45595926 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 169-275 |
| Cow position: | chr4:21173816-21173921 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 91 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 169-305 |
| Cow position: | chr4:69543153-69543288 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 169-306 |
| Cow position: | chr4:49629450-49629587 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 56 |
| Conread position: | 169-307 |
| Cow position: | chr4:45685428-45685565 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 170-306 |
| Cow position: | chr4:45589627-45589494 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 20, 55 |
| Conread position: | 171-305 |
| Cow position: | chr4:19539264-19539131 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 172-307 |
| Cow position: | chr4:10999741-10999607 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 174-307 |
| Cow position: | chr4:61268168-61268299 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 175-305 |
| Cow position: | chr4:61608988-61608859 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 179-305 |
| Cow position: | chr4:1852-1977 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 183-305 |
| Cow position: | chr4:16814367-16814488 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 183-305 |
| Cow position: | chr4:19496479-19496600 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 184-305 |
| Cow position: | chr4:1236887-1236768 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 185-305 |
| Cow position: | chr4:8083812-8083692 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 26, 39 |
| Conread position: | 188-305 |
| Cow position: | chr4:17790302-17790186 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 188-306 |
| Cow position: | chr4:45262058-45261940 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 102, 35 |
| Conread position: | 189-304 |
| Cow position: | chr4:51708056-51708170 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 189-305 |
| Cow position: | chr4:32272982-32272868 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 192-305 |
| Cow position: | chr4:13141100-13140991 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 193-304 |
| Cow position: | chr4:65805890-65806000 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 194-305 |
| Cow position: | chr4:61969729-61969620 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 198-303 |
| Cow position: | chr4:58389242-58389138 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 200-305 |
| Cow position: | chr4:56805182-56805282 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 202-304 |
| Cow position: | chr4:46761611-46761712 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 206-305 |
| Cow position: | chr4:21533088-21532991 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
Show alignments to all cow chromosomes.