Cow genome map
| Conread name: | Mixn-0018b20 |
| Conread position: | 128-303 |
| Cow position: | chr5:56613602-56613426 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 37, 95 |
| Conread position: | 138-306 |
| Cow position: | chr5:6519985-6520152 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 92, 28 |
| Conread position: | 139-306 |
| Cow position: | chr5:60515054-60514889 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 23, 7 |
| Conread position: | 146-306 |
| Cow position: | chr5:65679992-65679833 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 10, 80 |
| Conread position: | 150-305 |
| Cow position: | chr5:4280431-4280587 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 45, 75 |
| Conread position: | 150-305 |
| Cow position: | chr5:16939609-16939455 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 154-303 |
| Cow position: | chr5:45273512-45273365 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 154-305 |
| Cow position: | chr5:11562734-11562583 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 156-305 |
| Cow position: | chr5:4032000-4031847 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 13, 70 |
| Conread position: | 157-306 |
| Cow position: | chr5:20128045-20128193 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 143, 9 |
| Conread position: | 158-298 |
| Cow position: | chr5:58856096-58856234 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 159-305 |
| Cow position: | chr5:54311329-54311475 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 6, 64 |
| Conread position: | 159-305 |
| Cow position: | chr5:57686743-57686598 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 159-306 |
| Cow position: | chr5:51490252-51490109 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 11, 48 |
| Conread position: | 160-250 |
| Cow position: | chr5:40356852-40356762 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 63 |
| Conread position: | 160-284 |
| Cow position: | chr5:46672200-46672323 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 110, 63 |
| Conread position: | 160-297 |
| Cow position: | chr5:50101381-50101243 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 72, 63 |
| Conread position: | 160-305 |
| Cow position: | chr5:11668191-11668046 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 9, 64 |
| Conread position: | 160-305 |
| Cow position: | chr5:37646548-37646405 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 160-305 |
| Cow position: | chr5:67212356-67212499 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 161-269 |
| Cow position: | chr5:31918638-31918745 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 6, 63 |
| Conread position: | 161-283 |
| Cow position: | chr5:57062533-57062412 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 161-292 |
| Cow position: | chr5:24349103-24349233 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 161-297 |
| Cow position: | chr5:30561928-30562063 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 161-297 |
| Cow position: | chr5:44848028-44847890 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 49, 65 |
| Conread position: | 161-297 |
| Cow position: | chr5:64758771-64758636 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 161-298 |
| Cow position: | chr5:21039982-21039851 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 161-301 |
| Cow position: | chr5:52000219-52000353 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 161-302 |
| Cow position: | chr5:62142672-62142812 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 161-304 |
| Cow position: | chr5:29353129-29352989 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 161-304 |
| Cow position: | chr5:55795971-55795828 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 73, 62 |
| Conread position: | 161-305 |
| Cow position: | chr5:14550588-14550445 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 161-305 |
| Cow position: | chr5:16938026-16937890 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 161-305 |
| Cow position: | chr5:24946236-24946379 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 161-305 |
| Cow position: | chr5:28035740-28035881 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 161-305 |
| Cow position: | chr5:33560738-33560595 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 161-305 |
| Cow position: | chr5:35513211-35513354 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 109, 62 |
| Conread position: | 161-305 |
| Cow position: | chr5:37808667-37808524 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 161-305 |
| Cow position: | chr5:41981368-41981507 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 161-305 |
| Cow position: | chr5:43858423-43858281 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 161-305 |
| Cow position: | chr5:45420141-45419998 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 161-305 |
| Cow position: | chr5:50871808-50871956 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 161-305 |
| Cow position: | chr5:51053656-51053510 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 61, 18 |
| Conread position: | 161-305 |
| Cow position: | chr5:52165181-52165040 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 161-305 |
| Cow position: | chr5:53855696-53855845 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 161-305 |
| Cow position: | chr5:59627096-59627239 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 161-305 |
| Cow position: | chr5:63987449-63987307 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 161-306 |
| Cow position: | chr5:29828042-29828186 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 44, 63 |
| Conread position: | 161-306 |
| Cow position: | chr5:34914557-34914412 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 12, 63 |
| Conread position: | 161-306 |
| Cow position: | chr5:39875120-39875264 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 161-306 |
| Cow position: | chr5:47696445-47696310 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 161-307 |
| Cow position: | chr5:9369274-9369130 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 162-296 |
| Cow position: | chr5:25020770-25020639 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 162-297 |
| Cow position: | chr5:27293887-27293753 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 162-299 |
| Cow position: | chr5:20595462-20595598 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 129, 61 |
| Conread position: | 162-301 |
| Cow position: | chr5:60715366-60715233 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 162-303 |
| Cow position: | chr5:2309559-2309421 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 162-303 |
| Cow position: | chr5:39447538-39447395 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 110, 59 |
| Conread position: | 162-304 |
| Cow position: | chr5:42845596-42845453 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 100, 60 |
| Conread position: | 162-304 |
| Cow position: | chr5:63234827-63234691 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 162-305 |
| Cow position: | chr5:9090026-9089889 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 162-305 |
| Cow position: | chr5:15479123-15479264 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 162-305 |
| Cow position: | chr5:16206156-16206016 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 85, 40 |
| Conread position: | 162-305 |
| Cow position: | chr5:23678702-23678564 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 162-305 |
| Cow position: | chr5:30845110-30845247 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 98, 61 |
| Conread position: | 162-305 |
| Cow position: | chr5:54060275-54060415 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 162-305 |
| Cow position: | chr5:54350364-54350222 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 162-305 |
| Cow position: | chr5:55129340-55129482 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 162-305 |
| Cow position: | chr5:64523866-64523724 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 162-306 |
| Cow position: | chr5:37757838-37757699 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 10, 40 |
| Conread position: | 162-306 |
| Cow position: | chr5:44054055-44053915 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 162-306 |
| Cow position: | chr5:46322801-46322663 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 163-296 |
| Cow position: | chr5:34624957-34625090 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 163-298 |
| Cow position: | chr5:48867466-48867332 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 163-304 |
| Cow position: | chr5:5855856-5855996 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 163-304 |
| Cow position: | chr5:26262676-26262541 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 163-304 |
| Cow position: | chr5:72006865-72006727 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 163-305 |
| Cow position: | chr5:2469209-2469073 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 163-305 |
| Cow position: | chr5:20995094-20994947 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 163-305 |
| Cow position: | chr5:34528549-34528685 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 113, 60 |
| Conread position: | 163-305 |
| Cow position: | chr5:34915055-34914914 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 163-305 |
| Cow position: | chr5:36838958-36839098 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 163-305 |
| Cow position: | chr5:50575782-50575922 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 163-305 |
| Cow position: | chr5:55955906-55956051 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 94, 58 |
| Conread position: | 163-305 |
| Cow position: | chr5:67634519-67634375 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 117, 58 |
| Conread position: | 163-306 |
| Cow position: | chr5:15364267-15364408 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 163-306 |
| Cow position: | chr5:38717308-38717449 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 163-306 |
| Cow position: | chr5:45225815-45225677 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 163-306 |
| Cow position: | chr5:60747278-60747141 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 166-265 |
| Cow position: | chr5:14742215-14742313 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 166-289 |
| Cow position: | chr5:55350911-55350787 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 59 |
| Conread position: | 166-296 |
| Cow position: | chr5:45574364-45574235 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 166-297 |
| Cow position: | chr5:27306308-27306435 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 166-303 |
| Cow position: | chr5:20779394-20779261 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 166-304 |
| Cow position: | chr5:26477016-26476880 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 166-304 |
| Cow position: | chr5:57230337-57230200 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 166-305 |
| Cow position: | chr5:35784986-35784850 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 107, 57 |
| Conread position: | 166-305 |
| Cow position: | chr5:35969534-35969671 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 166-305 |
| Cow position: | chr5:44163368-44163229 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 54, 58 |
| Conread position: | 166-305 |
| Cow position: | chr5:49501823-49501685 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 166-305 |
| Cow position: | chr5:72564765-72564903 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 166-306 |
| Cow position: | chr5:4710150-4710012 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 166-306 |
| Cow position: | chr5:17566437-17566299 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 166-306 |
| Cow position: | chr5:27419728-27419589 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 166-306 |
| Cow position: | chr5:56153618-56153755 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 166-307 |
| Cow position: | chr5:14904068-14903927 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 54, 58 |
| Conread position: | 166-307 |
| Cow position: | chr5:16214688-16214830 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 126, 57 |
| Conread position: | 166-307 |
| Cow position: | chr5:18574176-18574313 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 108, 56 |
| Conread position: | 166-307 |
| Cow position: | chr5:55019293-55019433 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 167-285 |
| Cow position: | chr5:32696820-32696704 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 167-296 |
| Cow position: | chr5:30949913-30949785 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 167-305 |
| Cow position: | chr5:458491-458627 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 167-305 |
| Cow position: | chr5:28230164-28230303 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 58 |
| Conread position: | 167-306 |
| Cow position: | chr5:39258510-39258645 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 168-305 |
| Cow position: | chr5:3589035-3589166 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 168-305 |
| Cow position: | chr5:33273698-33273832 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 56 |
| Conread position: | 168-305 |
| Cow position: | chr5:44796730-44796594 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 168-305 |
| Cow position: | chr5:47323466-47323601 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 168-306 |
| Cow position: | chr5:46023062-46022924 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 63, 122 |
| Conread position: | 169-297 |
| Cow position: | chr5:5257284-5257157 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 169-305 |
| Cow position: | chr5:29771532-29771667 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 169-305 |
| Cow position: | chr5:57737103-57737238 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 171-307 |
| Cow position: | chr5:7723670-7723806 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 16, 54 |
| Conread position: | 172-285 |
| Cow position: | chr5:62415954-62415842 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 172-307 |
| Cow position: | chr5:56361803-56361934 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 173-305 |
| Cow position: | chr5:18062311-18062180 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 174-306 |
| Cow position: | chr5:71454603-71454472 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 184-306 |
| Cow position: | chr5:54436775-54436893 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 184-307 |
| Cow position: | chr5:12738536-12738418 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 187-305 |
| Cow position: | chr5:53145730-53145613 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 188-306 |
| Cow position: | chr5:37842256-37842139 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 190-307 |
| Cow position: | chr5:51277828-51277712 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 190-307 |
| Cow position: | chr5:51490577-51490461 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 191-305 |
| Cow position: | chr5:20882598-20882485 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 191-305 |
| Cow position: | chr5:36822913-36823022 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 192-305 |
| Cow position: | chr5:44734698-44734586 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 193-305 |
| Cow position: | chr5:16668725-16668836 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 193-307 |
| Cow position: | chr5:49821456-49821569 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 195-305 |
| Cow position: | chr5:64843941-64843832 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 208-302 |
| Cow position: | chr5:29979915-29979822 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
Show alignments to all cow chromosomes.