Cow genome map
Conread name: | Mixn-0020p11 |
Conread position: | 1-116 |
Cow position: | chr27:22647383-22647501 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 95 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-166 |
Cow position: | chr27:20716550-20716718 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 140 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-168 |
Cow position: | chr27:15033642-15033812 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 136 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-178 |
Cow position: | chr27:9332926-9332747 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 98 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 1-214 |
Cow position: | chr27:15634093-15634308 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 1-215 |
Cow position: | chr27:12006397-12006181 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-215 |
Cow position: | chr27:19488253-19488037 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-215 |
Cow position: | chr27:22329750-22329529 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 162 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 48, 170 |
Conread position: | 1-255 |
Cow position: | chr27:3653451-3653706 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-260 |
Cow position: | chr27:27729238-27729500 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 193 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 49, 172 |
Conread position: | 1-261 |
Cow position: | chr27:14297456-14297194 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-262 |
Cow position: | chr27:19523459-19523723 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 1-262 |
Cow position: | chr27:25971352-25971614 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 116 |
Conread position: | 1-264 |
Cow position: | chr27:5925522-5925257 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 169 |
Conread position: | 1-264 |
Cow position: | chr27:14380553-14380305 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 188 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 49, 90 |
Conread position: | 1-264 |
Cow position: | chr27:27045426-27045167 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 196 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 49, 109 |
Conread position: | 1-265 |
Cow position: | chr27:29036131-29036386 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 199 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 49, 139 |
Conread position: | 1-268 |
Cow position: | chr27:25800958-25801224 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 12 |
Conread position: | 1-270 |
Cow position: | chr27:1520929-1520658 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 169 |
Conread position: | 1-270 |
Cow position: | chr27:2001094-2000823 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 76 |
Conread position: | 1-270 |
Cow position: | chr27:2557740-2558013 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 171 |
Conread position: | 1-270 |
Cow position: | chr27:5983781-5984052 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr27:10579196-10578924 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr27:13308893-13308622 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr27:13353555-13353284 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr27:15544264-15543993 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr27:16031148-16031419 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr27:19424128-19424400 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 1-270 |
Cow position: | chr27:21283986-21284251 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 115 |
Conread position: | 1-270 |
Cow position: | chr27:27849519-27849248 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-274 |
Cow position: | chr27:3232285-3232559 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 1-274 |
Cow position: | chr27:3990551-3990825 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 70 |
Conread position: | 1-274 |
Cow position: | chr27:4331491-4331765 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-274 |
Cow position: | chr27:4982621-4982347 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 1-274 |
Cow position: | chr27:5914182-5913913 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 172 |
Conread position: | 1-274 |
Cow position: | chr27:9989954-9990234 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 209 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 12, 17 |
Conread position: | 1-274 |
Cow position: | chr27:24296020-24296291 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 1-274 |
Cow position: | chr27:26330181-26329908 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 138 |
Conread position: | 1-274 |
Cow position: | chr27:27291638-27291365 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 1-277 |
Cow position: | chr27:344681-344951 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 202 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 105, 43 |
Conread position: | 1-277 |
Cow position: | chr27:1081913-1082190 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 171 |
Conread position: | 2-155 |
Cow position: | chr27:25885073-25884923 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 124 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 48, 88 |
Conread position: | 3-185 |
Cow position: | chr27:15348909-15348725 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 149 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 47, 169 |
Conread position: | 3-196 |
Cow position: | chr27:27930455-27930259 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 154 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 47, 170 |
Conread position: | 3-270 |
Cow position: | chr27:165672-165942 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 169 |
Conread position: | 3-273 |
Cow position: | chr27:19932319-19932586 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 169 |
Conread position: | 3-274 |
Cow position: | chr27:29811574-29811306 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 172 |
Conread position: | 4-264 |
Cow position: | chr27:20810667-20810405 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 165 |
Conread position: | 6-270 |
Cow position: | chr27:22797413-22797679 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 166 |
Conread position: | 8-270 |
Cow position: | chr27:26856299-26856038 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 143 |
Conread position: | 26-308 |
Cow position: | chr27:26552161-26552432 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 194 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 24, 36 |
Show alignments to all cow chromosomes.