Cow genome map

Conread name: Mixn-0023l07

Conread position: 1-110
Cow position: chr14:38047090-38046978 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 1-118
Cow position: chr14:26129272-26129392 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 1-121
Cow position: chr14:34763639-34763516 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 1-144
Cow position: chr14:28211868-28211724 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 59, 43

Conread position: 1-145
Cow position: chr14:24797780-24797927 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 123
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 1-164
Cow position: chr14:24980457-24980291 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 136
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 49, 0

Conread position: 1-167
Cow position: chr14:40483552-40483721 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 138
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 49, 0

Conread position: 1-169
Cow position: chr14:14271267-14271095 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 140
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 49, 0

Conread position: 1-186
Cow position: chr14:9482861-9482674 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 149
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 49, 171

Conread position: 1-200
Cow position: chr14:12833760-12833561 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 161
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 49, 131

Conread position: 1-212
Cow position: chr14:41220138-41220351 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 113

Conread position: 1-214
Cow position: chr14:38651821-38651606 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-215
Cow position: chr14:28993438-28993654 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-224
Cow position: chr14:40345427-40345204 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 72

Conread position: 1-234
Cow position: chr14:21596506-21596735 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 49, 89

Conread position: 1-248
Cow position: chr14:31289769-31289520 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-248
Cow position: chr14:35016269-35016020 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-260
Cow position: chr14:22689986-22690246 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 170

Conread position: 1-262
Cow position: chr14:41478659-41478396 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 47, 174

Conread position: 1-262
Cow position: chr14:50069288-50069545 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 49, 91

Conread position: 1-264
Cow position: chr14:7475767-7475502 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 168

Conread position: 1-264
Cow position: chr14:17690038-17689773 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-265
Cow position: chr14:28350788-28351054 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 174

Conread position: 1-268
Cow position: chr14:48572444-48572717 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 178

Conread position: 1-270
Cow position: chr14:748688-748960 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 1-270
Cow position: chr14:2289163-2288892 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr14:8396870-8397141 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr14:8925006-8924735 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr14:9047748-9047477 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr14:9449622-9449890 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 172

Conread position: 1-270
Cow position: chr14:9744709-9744978 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 12

Conread position: 1-270
Cow position: chr14:9811591-9811320 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr14:12616341-12616612 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr14:12858727-12858999 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr14:13236889-13237160 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr14:13464307-13464037 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 49, 107

Conread position: 1-270
Cow position: chr14:13581779-13581509 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 84

Conread position: 1-270
Cow position: chr14:13683476-13683205 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr14:15336723-15336994 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 171

Conread position: 1-270
Cow position: chr14:17488429-17488700 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr14:19419004-19418733 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr14:19489891-19489621 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 49, 168

Conread position: 1-270
Cow position: chr14:19550103-19549834 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 12

Conread position: 1-270
Cow position: chr14:23254428-23254699 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr14:29044763-29045034 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr14:31881978-31882249 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr14:34168208-34167941 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 170

Conread position: 1-270
Cow position: chr14:34629285-34629563 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr14:38238186-38238457 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr14:38459244-38459513 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 170

Conread position: 1-270
Cow position: chr14:40969065-40968794 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr14:44367587-44367316 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr14:45025719-45025988 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 141

Conread position: 1-270
Cow position: chr14:45789881-45789616 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 48, 171

Conread position: 1-270
Cow position: chr14:46636625-46636893 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr14:46960297-46960026 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr14:50137179-50136911 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 12

Conread position: 1-273
Cow position: chr14:37227083-37226810 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-273
Cow position: chr14:50114278-50114004 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 175

Conread position: 1-274
Cow position: chr14:1727056-1726783 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 171

Conread position: 1-274
Cow position: chr14:8884972-8885244 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 69

Conread position: 1-274
Cow position: chr14:8998524-8998251 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 167

Conread position: 1-274
Cow position: chr14:10310469-10310191 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr14:12740139-12740413 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr14:12903244-12902970 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr14:13860631-13860905 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-274
Cow position: chr14:16916817-16917090 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr14:16997128-16997403 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr14:19325349-19325623 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 168

Conread position: 1-274
Cow position: chr14:22026864-22027136 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 84

Conread position: 1-274
Cow position: chr14:34906435-34906162 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 146

Conread position: 1-274
Cow position: chr14:44026905-44027180 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 49, 172

Conread position: 1-274
Cow position: chr14:46302814-46302541 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 95

Conread position: 1-274
Cow position: chr14:48251538-48251813 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-277
Cow position: chr14:11151006-11151283 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-277
Cow position: chr14:44076775-44077053 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 169

Conread position: 3-168
Cow position: chr14:44382187-44382020 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 47, 38

Conread position: 3-264
Cow position: chr14:24922691-24922428 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 165

Conread position: 3-270
Cow position: chr14:35382581-35382833 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 104, 39

Conread position: 3-270
Cow position: chr14:35419779-35419520 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 47, 88

Conread position: 3-270
Cow position: chr14:36289206-36288940 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 202
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 38, 106

Conread position: 3-270
Cow position: chr14:48491477-48491206 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 159

Conread position: 3-273
Cow position: chr14:50121517-50121780 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 202
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 47, 7

Conread position: 3-274
Cow position: chr14:17757132-17757403 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 169

Conread position: 3-274
Cow position: chr14:38435939-38435669 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 169

Conread position: 3-306
Cow position: chr14:12545572-12545269 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 169

Conread position: 3-319
Cow position: chr14:8900361-8900684 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 176

Conread position: 5-258
Cow position: chr14:13811129-13811384 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 191
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 45, 167

Conread position: 6-266
Cow position: chr14:45186930-45187191 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 42, 163

Conread position: 10-267
Cow position: chr14:20746916-20747175 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 173
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 43, 98

Show alignments to all cow chromosomes.