Cow genome map


           Conread name:
           Mixn-0023l07
        

               Conread position:
               1-121
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-139
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               49, 84
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               49, 76
               

               Conread position:
               1-167
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-167
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-167
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               145
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               48, 171
               

               Conread position:
               1-178
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               145
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               49, 167
               

               Conread position:
               1-192
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               157
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               1-199
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               160
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               33, 172
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               162
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               49, 171
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 171
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               167
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               48, 102
               

               Conread position:
               1-233
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               49, 168
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 171
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 171
               

               Conread position:
               1-245
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 171
               

               Conread position:
               1-245
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 171
               

               Conread position:
               1-262
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 168
               

               Conread position:
               1-265
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 112
               

               Conread position:
               1-267
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               58, 42
               

               Conread position:
               1-268
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 95
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 171
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 171
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               198
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               49, 88
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 171
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 171
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 171
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 171
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 171
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 171
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 171
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               49, 168
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 168
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 120
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               49, 104
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 146
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 171
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 171
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 42
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 171
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 171
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               49, 89
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 171
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 171
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 171
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 171
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 171
               

               Conread position:
               1-274
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 133
               

               Conread position:
               1-274
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               49, 168
               

               Conread position:
               1-274
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 41
               

               Conread position:
               1-274
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 168
               

               Conread position:
               1-274
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               199
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               44, 171
               

               Conread position:
               1-274
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 171
               

               Conread position:
               1-274
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 147
               

               Conread position:
               1-274
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 12
               

               Conread position:
               1-274
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 168
               

               Conread position:
               1-277
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               203
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               47, 171
               

               Conread position:
               1-277
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               208
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               40, 89
               

               Conread position:
               1-288
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 95
               

               Conread position:
               1-298
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 171
               

               Conread position:
               1-312
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 124
               

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 89
               

               Conread position:
               3-190
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               47, 114
               

               Conread position:
               3-234
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               47, 69
               

               Conread position:
               3-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               3-270
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               47, 174
               

               Conread position:
               3-270
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 169
               

               Conread position:
               3-270
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 72
               

               Conread position:
               3-319
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               101, 39
               

               Conread position:
               4-160
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               4-187
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               44, 168
               

               Conread position:
               4-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               46, 168
               

               Conread position:
               4-270
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               49, 174
               

               Conread position:
               5-237
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 37
               

               Conread position:
               5-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 167
               

               Conread position:
               5-270
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 39
               

               Conread position:
               6-274
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               54, 34
               

               Conread position:
               8-264
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 83
               

               Conread position:
               14-258
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 158
               

               Conread position:
               16-270
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               34, 89
               
Show alignments to all cow chromosomes.