Cow genome map
Conread name: | Mixn-0023l07 |
Conread position: | 1-121 |
Cow position: | chr17:28024776-28024899 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 97 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-139 |
Cow position: | chr17:5174689-5174830 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 114 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-140 |
Cow position: | chr17:2583518-2583376 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 114 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-148 |
Cow position: | chr17:1672425-1672276 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 117 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 49, 84 |
Conread position: | 1-164 |
Cow position: | chr17:14212892-14213057 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 132 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 49, 76 |
Conread position: | 1-167 |
Cow position: | chr17:15128512-15128343 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 138 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-167 |
Cow position: | chr17:20225728-20225559 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 138 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-167 |
Cow position: | chr17:37415762-37415931 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 136 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-172 |
Cow position: | chr17:14232578-14232752 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 129 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-173 |
Cow position: | chr17:4635649-4635823 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 145 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 48, 171 |
Conread position: | 1-178 |
Cow position: | chr17:16903710-16903532 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 145 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 49, 167 |
Conread position: | 1-192 |
Cow position: | chr17:8212185-8211993 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 157 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 49, 11 |
Conread position: | 1-199 |
Cow position: | chr17:5546158-5546358 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 160 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 33, 172 |
Conread position: | 1-200 |
Cow position: | chr17:18777704-18777905 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 162 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-215 |
Cow position: | chr17:8222831-8222615 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-215 |
Cow position: | chr17:17957723-17957514 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 167 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 48, 102 |
Conread position: | 1-233 |
Cow position: | chr17:14932741-14932975 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 178 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 1-238 |
Cow position: | chr17:5806363-5806602 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 187 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-238 |
Cow position: | chr17:14865258-14865497 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-245 |
Cow position: | chr17:5638763-5639009 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-245 |
Cow position: | chr17:5672391-5672637 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-262 |
Cow position: | chr17:6262982-6262720 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 1-265 |
Cow position: | chr17:15438917-15438653 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 112 |
Conread position: | 1-267 |
Cow position: | chr17:1457253-1457523 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 198 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 58, 42 |
Conread position: | 1-268 |
Cow position: | chr17:43991614-43991346 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 95 |
Conread position: | 1-270 |
Cow position: | chr17:184273-184002 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr17:1970277-1970006 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr17:2244940-2245203 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 198 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 49, 88 |
Conread position: | 1-270 |
Cow position: | chr17:4480756-4481027 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 171 |
Conread position: | 1-270 |
Cow position: | chr17:6122909-6122638 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 171 |
Conread position: | 1-270 |
Cow position: | chr17:15117943-15117672 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr17:15140213-15140483 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr17:15325110-15325380 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr17:15708867-15709138 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr17:15809113-15808842 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr17:17128131-17127851 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 206 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 1-270 |
Cow position: | chr17:18099948-18100220 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 1-270 |
Cow position: | chr17:19215269-19215539 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 120 |
Conread position: | 1-270 |
Cow position: | chr17:20084687-20084957 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 195 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 49, 104 |
Conread position: | 1-270 |
Cow position: | chr17:20094032-20094301 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 146 |
Conread position: | 1-270 |
Cow position: | chr17:20390900-20390629 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr17:20546263-20545992 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr17:23321293-23321565 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 42 |
Conread position: | 1-270 |
Cow position: | chr17:24785316-24785045 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr17:26829618-26829888 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr17:27791656-27791918 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 202 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 49, 89 |
Conread position: | 1-270 |
Cow position: | chr17:29824835-29825106 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr17:30182454-30182725 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr17:34236125-34236396 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr17:37528846-37529117 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr17:44641344-44641615 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-274 |
Cow position: | chr17:138734-138465 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 133 |
Conread position: | 1-274 |
Cow position: | chr17:11084009-11084272 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 207 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 1-274 |
Cow position: | chr17:13931021-13930749 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 41 |
Conread position: | 1-274 |
Cow position: | chr17:15328407-15328133 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 1-274 |
Cow position: | chr17:21767023-21766749 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 199 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 44, 171 |
Conread position: | 1-274 |
Cow position: | chr17:24026857-24027131 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-274 |
Cow position: | chr17:25739422-25739156 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 147 |
Conread position: | 1-274 |
Cow position: | chr17:29950338-29950067 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 12 |
Conread position: | 1-274 |
Cow position: | chr17:40810877-40810602 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 1-277 |
Cow position: | chr17:2177106-2176832 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 203 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 47, 171 |
Conread position: | 1-277 |
Cow position: | chr17:29075229-29075493 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 208 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 40, 89 |
Conread position: | 1-288 |
Cow position: | chr17:4085193-4084906 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 95 |
Conread position: | 1-298 |
Cow position: | chr17:6612148-6611848 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-312 |
Cow position: | chr17:1784415-1784731 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 124 |
Conread position: | 1-318 |
Cow position: | chr17:2265315-2264998 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 89 |
Conread position: | 3-190 |
Cow position: | chr17:31232801-31232614 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 147 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 47, 114 |
Conread position: | 3-234 |
Cow position: | chr17:36159928-36160149 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 167 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 47, 69 |
Conread position: | 3-264 |
Cow position: | chr17:14029222-14029484 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 168 |
Conread position: | 3-270 |
Cow position: | chr17:14249984-14250257 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 203 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 47, 174 |
Conread position: | 3-270 |
Cow position: | chr17:21770804-21770535 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 169 |
Conread position: | 3-270 |
Cow position: | chr17:43471467-43471735 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 72 |
Conread position: | 3-319 |
Cow position: | chr17:2178972-2178672 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 230 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 101, 39 |
Conread position: | 4-160 |
Cow position: | chr17:6955762-6955612 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 120 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 4-187 |
Cow position: | chr17:13910485-13910673 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 147 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 44, 168 |
Conread position: | 4-264 |
Cow position: | chr17:22563268-22563007 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 193 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 46, 168 |
Conread position: | 4-270 |
Cow position: | chr17:8205069-8204796 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 205 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 49, 174 |
Conread position: | 5-237 |
Cow position: | chr17:18200859-18200626 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 37 |
Conread position: | 5-264 |
Cow position: | chr17:1311640-1311901 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 167 |
Conread position: | 5-270 |
Cow position: | chr17:22774328-22774581 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 39 |
Conread position: | 6-274 |
Cow position: | chr17:15307276-15307524 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 196 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 54, 34 |
Conread position: | 8-264 |
Cow position: | chr17:16118340-16118592 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 83 |
Conread position: | 14-258 |
Cow position: | chr17:43231055-43231300 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 158 |
Conread position: | 16-270 |
Cow position: | chr17:15374516-15374267 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 187 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 34, 89 |
Show alignments to all cow chromosomes.