Cow genome map

Conread name: Mixn-0023l07

Conread position: 1-101
Cow position: chr2:38636513-38636615 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 1-110
Cow position: chr2:43372839-43372727 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 1-116
Cow position: chr2:2558525-2558643 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 1-127
Cow position: chr2:68422352-68422224 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 49, 95

Conread position: 1-132
Cow position: chr2:70810385-70810251 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 1-137
Cow position: chr2:84101871-84102010 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 1-140
Cow position: chr2:21606340-21606202 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 93

Conread position: 1-157
Cow position: chr2:29967536-29967695 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 130
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 1-160
Cow position: chr2:9911078-9910916 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 1-167
Cow position: chr2:15241363-15241532 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 140
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 49, 0

Conread position: 1-167
Cow position: chr2:24566974-24567143 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 138
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 49, 0

Conread position: 1-167
Cow position: chr2:31047664-31047495 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 138
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 49, 0

Conread position: 1-167
Cow position: chr2:49827739-49827908 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 139
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 49, 0

Conread position: 1-167
Cow position: chr2:63707351-63707520 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 1-167
Cow position: chr2:81147184-81147353 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 138
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 49, 0

Conread position: 1-172
Cow position: chr2:7506782-7506956 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 1-175
Cow position: chr2:46303154-46303330 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 144
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 49, 168

Conread position: 1-177
Cow position: chr2:52159849-52160029 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 1-189
Cow position: chr2:12209403-12209593 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 151
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 49, 171

Conread position: 1-191
Cow position: chr2:209307-209493 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 83

Conread position: 1-196
Cow position: chr2:39675947-39676145 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 158
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 40, 171

Conread position: 1-196
Cow position: chr2:41953813-41953615 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 49, 171

Conread position: 1-201
Cow position: chr2:9700323-9700121 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 40, 171

Conread position: 1-203
Cow position: chr2:70524555-70524351 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 48, 171

Conread position: 1-204
Cow position: chr2:46265101-46264896 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 163
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 49, 171

Conread position: 1-204
Cow position: chr2:50431845-50432050 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 160
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 49, 96

Conread position: 1-212
Cow position: chr2:30815932-30816142 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 90

Conread position: 1-214
Cow position: chr2:21169147-21168931 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 49, 117

Conread position: 1-215
Cow position: chr2:9187081-9187295 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 50, 105

Conread position: 1-215
Cow position: chr2:17119279-17119494 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-215
Cow position: chr2:57587284-57587500 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-215
Cow position: chr2:86496454-86496238 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-234
Cow position: chr2:30380074-30379841 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 48, 123

Conread position: 1-238
Cow position: chr2:7905744-7905505 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-240
Cow position: chr2:2208867-2209108 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-240
Cow position: chr2:2212691-2212932 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-240
Cow position: chr2:40312322-40312083 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 12

Conread position: 1-245
Cow position: chr2:48360746-48360500 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 52, 72

Conread position: 1-252
Cow position: chr2:50565112-50564859 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-254
Cow position: chr2:15569287-15569541 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 49, 101

Conread position: 1-259
Cow position: chr2:58466473-58466221 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 141

Conread position: 1-262
Cow position: chr2:16072349-16072612 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-262
Cow position: chr2:78765453-78765190 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 200
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 49, 118

Conread position: 1-263
Cow position: chr2:2603465-2603198 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-264
Cow position: chr2:16327125-16327389 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 147

Conread position: 1-264
Cow position: chr2:28796645-28796379 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 17, 10

Conread position: 1-264
Cow position: chr2:36983451-36983187 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 167

Conread position: 1-264
Cow position: chr2:44189228-44188976 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 106, 43

Conread position: 1-264
Cow position: chr2:54716233-54715975 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 43

Conread position: 1-264
Cow position: chr2:63068082-63068347 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 174

Conread position: 1-264
Cow position: chr2:74761685-74761414 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 119

Conread position: 1-265
Cow position: chr2:2181472-2181737 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 120

Conread position: 1-265
Cow position: chr2:2410042-2410308 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-265
Cow position: chr2:39424727-39424465 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 90

Conread position: 1-265
Cow position: chr2:43756843-43757109 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-265
Cow position: chr2:57938194-57937929 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 84

Conread position: 1-265
Cow position: chr2:67188046-67188303 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 49, 170

Conread position: 1-267
Cow position: chr2:1693707-1693440 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 200
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 47, 145

Conread position: 1-267
Cow position: chr2:36104271-36104001 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 157

Conread position: 1-267
Cow position: chr2:55481420-55481683 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-268
Cow position: chr2:10262609-10262879 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-268
Cow position: chr2:53332602-53332333 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-270
Cow position: chr2:1187058-1187337 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 176

Conread position: 1-270
Cow position: chr2:2772524-2772257 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 201
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:3623320-3623049 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:3668859-3668589 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 95

Conread position: 1-270
Cow position: chr2:4180318-4180589 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:4340157-4339886 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:4400332-4400602 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 83

Conread position: 1-270
Cow position: chr2:4451251-4451521 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 88

Conread position: 1-270
Cow position: chr2:4742164-4741893 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:4917270-4917541 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:5116747-5116476 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:6004037-6004307 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 49, 90

Conread position: 1-270
Cow position: chr2:6528627-6528356 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:9714469-9714198 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:9962271-9962542 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:10123250-10123521 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 167

Conread position: 1-270
Cow position: chr2:11726176-11725905 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 84

Conread position: 1-270
Cow position: chr2:11813751-11814022 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:12752480-12752748 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:14208046-14208311 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 89

Conread position: 1-270
Cow position: chr2:15885135-15885406 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:17265634-17265905 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 174

Conread position: 1-270
Cow position: chr2:18021108-18021385 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 171

Conread position: 1-270
Cow position: chr2:18350599-18350871 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 173

Conread position: 1-270
Cow position: chr2:18521015-18521286 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:19049070-19049339 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:20278853-20279124 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:24688479-24688208 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:25978858-25978588 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 170

Conread position: 1-270
Cow position: chr2:28847371-28847102 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 43

Conread position: 1-270
Cow position: chr2:31407546-31407817 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:31410082-31410350 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 133

Conread position: 1-270
Cow position: chr2:31645036-31644763 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 173

Conread position: 1-270
Cow position: chr2:34470049-34470313 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 7, 88

Conread position: 1-270
Cow position: chr2:34501931-34501660 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:35883670-35883944 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 202
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 49, 95

Conread position: 1-270
Cow position: chr2:36910345-36910616 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:37324685-37324414 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-270
Cow position: chr2:37396179-37395908 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:38487175-38486904 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:39119401-39119130 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:42363605-42363871 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 43

Conread position: 1-270
Cow position: chr2:45917973-45918243 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 81

Conread position: 1-270
Cow position: chr2:47181951-47182222 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 174

Conread position: 1-270
Cow position: chr2:48850443-48850714 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:49301222-49301493 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 172

Conread position: 1-270
Cow position: chr2:49474700-49474429 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:50060197-50060468 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:53542738-53542468 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-270
Cow position: chr2:54740270-54740013 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 49, 12

Conread position: 1-270
Cow position: chr2:59410953-59411225 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 172

Conread position: 1-270
Cow position: chr2:63000724-63000453 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:66686209-66686480 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:70669509-70669238 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:72016614-72016343 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:72692574-72692306 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 60

Conread position: 1-270
Cow position: chr2:72939955-72940221 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr2:74237866-74238135 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 12

Conread position: 1-270
Cow position: chr2:77859123-77858858 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 89

Conread position: 1-271
Cow position: chr2:4804940-4805212 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-271
Cow position: chr2:22682080-22682352 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-271
Cow position: chr2:26906046-26905773 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-272
Cow position: chr2:52621574-52621302 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 158

Conread position: 1-274
Cow position: chr2:279445-279719 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 17

Conread position: 1-274
Cow position: chr2:576356-576082 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 171

Conread position: 1-274
Cow position: chr2:6965725-6965452 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 90

Conread position: 1-274
Cow position: chr2:10183429-10183703 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-274
Cow position: chr2:12221493-12221768 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr2:15963876-15964150 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr2:21981957-21982231 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr2:22080703-22080436 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 43

Conread position: 1-274
Cow position: chr2:24876394-24876666 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 105

Conread position: 1-274
Cow position: chr2:25885750-25886027 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 115

Conread position: 1-274
Cow position: chr2:28646827-28647101 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr2:42667907-42668181 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr2:46182736-46183010 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr2:50980356-50980629 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr2:51921766-51922039 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 167

Conread position: 1-274
Cow position: chr2:53003405-53003679 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 113

Conread position: 1-274
Cow position: chr2:53556964-53556691 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 165

Conread position: 1-274
Cow position: chr2:62734968-62734701 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 47, 117

Conread position: 1-278
Cow position: chr2:44476690-44476965 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 167

Conread position: 1-298
Cow position: chr2:981799-981496 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 169

Conread position: 1-301
Cow position: chr2:24928182-24927884 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 211
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 49, 76

Conread position: 1-301
Cow position: chr2:26130070-26130365 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-312
Cow position: chr2:383325-383635 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 213
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 95

Conread position: 1-312
Cow position: chr2:73992524-73992208 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 183

Conread position: 1-315
Cow position: chr2:12184567-12184252 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 119

Conread position: 1-316
Cow position: chr2:15572262-15572582 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 172

Conread position: 1-326
Cow position: chr2:41764058-41763740 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 141

Conread position: 1-326
Cow position: chr2:70259928-70259602 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 171

Conread position: 2-213
Cow position: chr2:826144-826357 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 170

Conread position: 2-270
Cow position: chr2:4725760-4725497 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 58, 41

Conread position: 2-270
Cow position: chr2:28638219-28638484 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 39

Conread position: 2-274
Cow position: chr2:25742473-25742743 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 83

Conread position: 2-306
Cow position: chr2:44229956-44230260 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 95

Conread position: 3-154
Cow position: chr2:69655217-69655063 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 124
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 3-207
Cow position: chr2:63058837-63058624 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 41

Conread position: 3-262
Cow position: chr2:13006108-13005845 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 47, 139

Conread position: 3-265
Cow position: chr2:14556936-14557196 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 50, 74

Conread position: 3-267
Cow position: chr2:11685793-11685533 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 50, 80

Conread position: 3-270
Cow position: chr2:2590888-2591154 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 47, 92

Conread position: 3-270
Cow position: chr2:10608991-10609260 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 166

Conread position: 3-270
Cow position: chr2:19212975-19213235 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 57, 47

Conread position: 3-270
Cow position: chr2:20870099-20870363 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 169

Conread position: 3-270
Cow position: chr2:20977836-20977568 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 166

Conread position: 3-270
Cow position: chr2:77468398-77468662 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 74

Conread position: 3-274
Cow position: chr2:10468394-10468122 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 39

Conread position: 3-328
Cow position: chr2:9591003-9590685 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 82

Conread position: 4-160
Cow position: chr2:16301717-16301558 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 0

Conread position: 4-175
Cow position: chr2:104947-105121 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 169

Conread position: 4-186
Cow position: chr2:33251834-33252017 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 150
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 46, 147

Conread position: 4-262
Cow position: chr2:53663311-53663046 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 192
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 38, 91

Conread position: 5-262
Cow position: chr2:51479964-51479706 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 154

Conread position: 5-270
Cow position: chr2:2096013-2096277 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 65

Conread position: 8-274
Cow position: chr2:10741348-10741615 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 164

Conread position: 14-229
Cow position: chr2:23275354-23275137 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 36, 89

Conread position: 15-259
Cow position: chr2:10739065-10739307 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 45, 36

Show alignments to all cow chromosomes.