Cow genome map
Conread name: | Mixn-0023l11 |
Conread position: | 1-112 |
Cow position: | chr19:23488114-23488002 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 93 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 59, 43 |
Conread position: | 1-120 |
Cow position: | chr19:10195768-10195646 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 99 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-140 |
Cow position: | chr19:12652230-12652083 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 117 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 1-156 |
Cow position: | chr19:12209578-12209737 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 126 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-160 |
Cow position: | chr19:22391572-22391410 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 133 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-167 |
Cow position: | chr19:5026837-5027006 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 141 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-175 |
Cow position: | chr19:930174-930000 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 139 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 49, 84 |
Conread position: | 1-182 |
Cow position: | chr19:25571804-25571987 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 142 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 1-229 |
Cow position: | chr19:9118165-9117937 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 181 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-240 |
Cow position: | chr19:16316852-16317094 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 172 |
Conread position: | 1-247 |
Cow position: | chr19:41204872-41205119 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-261 |
Cow position: | chr19:20403639-20403376 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-262 |
Cow position: | chr19:1564441-1564704 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-262 |
Cow position: | chr19:5732850-5732589 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 106 |
Conread position: | 1-262 |
Cow position: | chr19:40849134-40849399 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 150 |
Conread position: | 1-264 |
Cow position: | chr19:175823-175558 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 1-264 |
Cow position: | chr19:16478512-16478776 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 95 |
Conread position: | 1-264 |
Cow position: | chr19:33876771-33876506 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr19:374359-374626 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 199 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 49, 133 |
Conread position: | 1-270 |
Cow position: | chr19:405503-405233 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 172 |
Conread position: | 1-270 |
Cow position: | chr19:435983-436253 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 134 |
Conread position: | 1-270 |
Cow position: | chr19:730636-730906 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 1-270 |
Cow position: | chr19:776868-776598 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 167 |
Conread position: | 1-270 |
Cow position: | chr19:5902382-5902111 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr19:7345389-7345118 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr19:8206654-8206913 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 40 |
Conread position: | 1-270 |
Cow position: | chr19:10613583-10613312 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr19:12776464-12776200 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 104 |
Conread position: | 1-270 |
Cow position: | chr19:19389189-19388918 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 171 |
Conread position: | 1-270 |
Cow position: | chr19:20611689-20611418 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr19:22512600-22512329 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr19:24734498-24734227 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr19:28596731-28596459 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 1-270 |
Cow position: | chr19:30037552-30037823 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr19:33119369-33119640 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr19:33528202-33527931 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr19:33573365-33573633 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 42 |
Conread position: | 1-270 |
Cow position: | chr19:40016233-40016502 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 13 |
Conread position: | 1-270 |
Cow position: | chr19:43148936-43148665 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr19:48477924-48477658 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 61 |
Conread position: | 1-270 |
Cow position: | chr19:55164302-55164573 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr19:55421401-55421128 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 198 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 49, 76 |
Conread position: | 1-271 |
Cow position: | chr19:36351624-36351359 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 89 |
Conread position: | 1-274 |
Cow position: | chr19:2269946-2270220 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 173 |
Conread position: | 1-274 |
Cow position: | chr19:4388938-4388664 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 1-274 |
Cow position: | chr19:28794970-28795238 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 89 |
Conread position: | 1-274 |
Cow position: | chr19:39182185-39182459 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 1-274 |
Cow position: | chr19:45464489-45464227 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 203 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 106, 43 |
Conread position: | 1-277 |
Cow position: | chr19:207855-207578 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 1-297 |
Cow position: | chr19:48626414-48626118 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-312 |
Cow position: | chr19:743352-743661 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 220 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 95, 36 |
Conread position: | 2-260 |
Cow position: | chr19:39394555-39394295 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 167 |
Conread position: | 3-270 |
Cow position: | chr19:41686-41418 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 168 |
Conread position: | 3-270 |
Cow position: | chr19:39750566-39750307 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 193 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 3-271 |
Cow position: | chr19:39339715-39339984 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 112 |
Conread position: | 4-270 |
Cow position: | chr19:55843356-55843088 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 168 |
Conread position: | 8-212 |
Cow position: | chr19:32140345-32140142 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 154 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 51, 67 |
Conread position: | 8-270 |
Cow position: | chr19:5044338-5044590 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 197 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 52, 21 |
Conread position: | 8-270 |
Cow position: | chr19:55378243-55377979 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 164 |
Conread position: | 14-270 |
Cow position: | chr19:164790-165045 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 189 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 36, 158 |
Conread position: | 16-275 |
Cow position: | chr19:1585857-1585597 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 153 |
Show alignments to all cow chromosomes.