Cow genome map
Conread name: | Mixn-0023l11 |
Conread position: | 1-105 |
Cow position: | chr24:7960175-7960281 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 87 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-120 |
Cow position: | chr24:14250242-14250364 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-137 |
Cow position: | chr24:13496625-13496486 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 112 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-140 |
Cow position: | chr24:11104811-11104953 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 116 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-148 |
Cow position: | chr24:40428353-40428503 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 123 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-166 |
Cow position: | chr24:20604090-20603922 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 140 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-166 |
Cow position: | chr24:22047728-22047894 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 139 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 49, 90 |
Conread position: | 1-167 |
Cow position: | chr24:17161637-17161806 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 141 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-204 |
Cow position: | chr24:5990846-5991047 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 161 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 58, 12 |
Conread position: | 1-204 |
Cow position: | chr24:26412388-26412188 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 159 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 59, 12 |
Conread position: | 1-215 |
Cow position: | chr24:3793823-3793609 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 171 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 49, 102 |
Conread position: | 1-215 |
Cow position: | chr24:6035840-6036056 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 171 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-224 |
Cow position: | chr24:12119621-12119844 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 171 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 45, 132 |
Conread position: | 1-224 |
Cow position: | chr24:31381740-31381516 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 106 |
Conread position: | 1-234 |
Cow position: | chr24:12240214-12239983 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 164 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 57, 43 |
Conread position: | 1-240 |
Cow position: | chr24:6508817-6509054 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 180 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 48, 91 |
Conread position: | 1-242 |
Cow position: | chr24:35067436-35067677 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 182 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 49, 106 |
Conread position: | 1-247 |
Cow position: | chr24:25698285-25698038 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 65 |
Conread position: | 1-259 |
Cow position: | chr24:26388552-26388804 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 192 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 49, 106 |
Conread position: | 1-261 |
Cow position: | chr24:13491837-13491577 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 190 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-262 |
Cow position: | chr24:40467072-40467338 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 1-264 |
Cow position: | chr24:9549605-9549341 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 105 |
Conread position: | 1-268 |
Cow position: | chr24:5929120-5928851 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr24:1841531-1841802 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr24:3162811-3162540 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 171 |
Conread position: | 1-270 |
Cow position: | chr24:3850936-3850665 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr24:6052423-6052155 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 12 |
Conread position: | 1-270 |
Cow position: | chr24:6339915-6339643 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 169 |
Conread position: | 1-270 |
Cow position: | chr24:6524338-6524065 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 170 |
Conread position: | 1-270 |
Cow position: | chr24:7597218-7597489 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr24:9546513-9546242 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr24:11208266-11208537 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr24:14194508-14194778 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 76 |
Conread position: | 1-270 |
Cow position: | chr24:14760234-14759964 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 121 |
Conread position: | 1-270 |
Cow position: | chr24:15296456-15296185 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr24:16081146-16081417 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 196 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr24:17324035-17323767 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 114 |
Conread position: | 1-270 |
Cow position: | chr24:18112796-18112527 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 169 |
Conread position: | 1-270 |
Cow position: | chr24:20367707-20367437 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 134 |
Conread position: | 1-270 |
Cow position: | chr24:22794900-22794629 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 171 |
Conread position: | 1-270 |
Cow position: | chr24:22953903-22953632 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr24:25372444-25372173 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr24:31067704-31067975 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr24:40272188-40271921 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-270 |
Cow position: | chr24:40551966-40551695 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-272 |
Cow position: | chr24:36028174-36028446 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 43 |
Conread position: | 1-274 |
Cow position: | chr24:6079767-6079493 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 169 |
Conread position: | 1-274 |
Cow position: | chr24:6412819-6412545 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 1-274 |
Cow position: | chr24:8607670-8607396 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 1-274 |
Cow position: | chr24:12348052-12348327 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 100 |
Conread position: | 1-274 |
Cow position: | chr24:13374174-13374446 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 201 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-274 |
Cow position: | chr24:17545561-17545292 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 43 |
Conread position: | 1-274 |
Cow position: | chr24:20283871-20284140 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 43 |
Conread position: | 1-274 |
Cow position: | chr24:32361512-32361784 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 41 |
Conread position: | 1-274 |
Cow position: | chr24:35823864-35824134 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 154 |
Conread position: | 1-276 |
Cow position: | chr24:14352693-14352417 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 1-293 |
Cow position: | chr24:13191502-13191216 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 206 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 49, 89 |
Conread position: | 1-304 |
Cow position: | chr24:9088766-9089074 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 235 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 44, 100 |
Conread position: | 1-325 |
Cow position: | chr24:29190629-29190305 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 168 |
Conread position: | 2-264 |
Cow position: | chr24:31302045-31301781 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 170 |
Conread position: | 2-270 |
Cow position: | chr24:6020738-6021008 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 170 |
Conread position: | 2-270 |
Cow position: | chr24:38813984-38813714 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 55 |
Conread position: | 2-274 |
Cow position: | chr24:32740573-32740841 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 199 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 58, 15 |
Conread position: | 3-133 |
Cow position: | chr24:15667408-15667541 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 102 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 3-200 |
Cow position: | chr24:5653372-5653571 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 150 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 46, 169 |
Conread position: | 3-264 |
Cow position: | chr24:19467240-19467513 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 202 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 55, 39 |
Conread position: | 3-267 |
Cow position: | chr24:45086862-45086605 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 188 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 47, 103 |
Conread position: | 3-270 |
Cow position: | chr24:17365634-17365907 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 203 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 47, 176 |
Conread position: | 3-270 |
Cow position: | chr24:32608650-32608377 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 174 |
Conread position: | 3-270 |
Cow position: | chr24:36036487-36036756 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 169 |
Conread position: | 3-270 |
Cow position: | chr24:36556242-36556508 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 33 |
Conread position: | 3-270 |
Cow position: | chr24:36721783-36721515 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 170 |
Conread position: | 3-274 |
Cow position: | chr24:27148443-27148177 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 147 |
Conread position: | 3-277 |
Cow position: | chr24:5863016-5863288 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 41 |
Conread position: | 4-270 |
Cow position: | chr24:27724705-27724976 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 200 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 46, 168 |
Conread position: | 4-272 |
Cow position: | chr24:36779609-36779339 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 168 |
Conread position: | 8-247 |
Cow position: | chr24:12199032-12199273 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 178 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 42, 164 |
Conread position: | 14-242 |
Cow position: | chr24:17411737-17411509 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 166 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 36, 94 |
Conread position: | 14-270 |
Cow position: | chr24:19688251-19688509 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 158 |
Conread position: | 16-270 |
Cow position: | chr24:16646584-16646838 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 66 |
Conread position: | 25-301 |
Cow position: | chr24:37222502-37222777 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 178 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 28, 16 |
Show alignments to all cow chromosomes.