Cow genome map

Conread name: Mixn-0023l11

Conread position: 1-125
Cow position: chr6:56925957-56925829 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 1-129
Cow position: chr6:27094362-27094493 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 1-129
Cow position: chr6:52065897-52066028 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 1-129
Cow position: chr6:57228816-57228686 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 84

Conread position: 1-134
Cow position: chr6:9587759-9587623 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 1-134
Cow position: chr6:28399548-28399684 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 1-142
Cow position: chr6:65909548-65909408 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 95

Conread position: 1-145
Cow position: chr6:21163527-21163380 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 1-145
Cow position: chr6:33996971-33996824 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 1-148
Cow position: chr6:19718809-19718659 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 122
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 1-154
Cow position: chr6:11401544-11401388 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 1-154
Cow position: chr6:16645120-16644964 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 1-154
Cow position: chr6:49963728-49963885 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 1-155
Cow position: chr6:27939258-27939101 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 129
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 1-157
Cow position: chr6:24623916-24624073 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 104, 0

Conread position: 1-167
Cow position: chr6:18803835-18804003 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 137
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 49, 95

Conread position: 1-167
Cow position: chr6:53537300-53537130 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 142
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 49, 0

Conread position: 1-175
Cow position: chr6:34405525-34405349 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 49, 171

Conread position: 1-186
Cow position: chr6:46764178-46764365 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 150
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 49, 171

Conread position: 1-194
Cow position: chr6:1834219-1834023 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 1-198
Cow position: chr6:46633343-46633144 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 157
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 49, 171

Conread position: 1-205
Cow position: chr6:53672559-53672356 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 52, 76

Conread position: 1-211
Cow position: chr6:57856994-57856781 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 49, 174

Conread position: 1-213
Cow position: chr6:34017785-34017999 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 49, 171

Conread position: 1-215
Cow position: chr6:6034573-6034789 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-215
Cow position: chr6:6569007-6569210 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 93

Conread position: 1-215
Cow position: chr6:21857141-21857357 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-215
Cow position: chr6:23568369-23568585 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 169
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 49, 171

Conread position: 1-215
Cow position: chr6:28488354-28488570 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 169
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 49, 171

Conread position: 1-216
Cow position: chr6:10598228-10598010 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 136
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 49, 155

Conread position: 1-233
Cow position: chr6:21711930-21711694 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 171

Conread position: 1-233
Cow position: chr6:23879832-23880066 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 49, 171

Conread position: 1-237
Cow position: chr6:706222-705984 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-238
Cow position: chr6:843604-843843 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-238
Cow position: chr6:13850962-13850723 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-242
Cow position: chr6:452039-452282 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-248
Cow position: chr6:63177267-63177018 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-251
Cow position: chr6:50571415-50571163 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-253
Cow position: chr6:40813589-40813337 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 49, 168

Conread position: 1-258
Cow position: chr6:16418458-16418717 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-259
Cow position: chr6:67448702-67448962 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-262
Cow position: chr6:8205412-8205149 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 168

Conread position: 1-262
Cow position: chr6:38873437-38873700 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-264
Cow position: chr6:48348-48613 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-264
Cow position: chr6:14950428-14950693 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 171

Conread position: 1-264
Cow position: chr6:41231712-41231446 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-264
Cow position: chr6:42266957-42266698 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 106, 41

Conread position: 1-264
Cow position: chr6:55539047-55539311 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 169

Conread position: 1-264
Cow position: chr6:64719542-64719277 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-265
Cow position: chr6:1796849-1796585 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 12

Conread position: 1-265
Cow position: chr6:2089498-2089241 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 12

Conread position: 1-265
Cow position: chr6:12997645-12997379 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-265
Cow position: chr6:26667800-26668065 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-267
Cow position: chr6:4388965-4388696 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 172

Conread position: 1-269
Cow position: chr6:15137949-15138214 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-270
Cow position: chr6:126908-127179 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:328139-328407 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:727402-727667 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 56, 41

Conread position: 1-270
Cow position: chr6:888781-888510 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:1507286-1507557 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:2453070-2452801 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:2875810-2876078 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 43

Conread position: 1-270
Cow position: chr6:3152442-3152171 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 174

Conread position: 1-270
Cow position: chr6:3272258-3272527 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 44

Conread position: 1-270
Cow position: chr6:6557185-6556914 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:7467426-7467697 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:9234735-9234465 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 65

Conread position: 1-270
Cow position: chr6:10044439-10044168 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:11453644-11453915 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:11869710-11869981 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:12663091-12663362 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 171

Conread position: 1-270
Cow position: chr6:14928683-14928412 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:16050069-16050337 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 39

Conread position: 1-270
Cow position: chr6:16766616-16766887 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:17111941-17112212 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:17386747-17386476 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:19103684-19103955 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:19713010-19713281 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:20350865-20351136 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:22043784-22044055 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-270
Cow position: chr6:22737482-22737754 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 1-270
Cow position: chr6:25374884-25375141 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 202
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 49, 165

Conread position: 1-270
Cow position: chr6:31912951-31913222 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:31941091-31940820 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:33466182-33465913 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 202
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 149

Conread position: 1-270
Cow position: chr6:33489830-33490101 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:33809210-33809481 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:36230302-36230573 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:38932030-38932301 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:39898174-39897903 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-270
Cow position: chr6:43048971-43049242 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:44146723-44146994 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:45723921-45724192 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:46948042-46947772 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 84

Conread position: 1-270
Cow position: chr6:49826028-49826299 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:51150166-51149895 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:51868211-51867948 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 12

Conread position: 1-270
Cow position: chr6:53543259-53543530 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 175

Conread position: 1-270
Cow position: chr6:55238914-55238649 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 89

Conread position: 1-270
Cow position: chr6:56451871-56452142 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:57521399-57521127 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:59619300-59619027 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 167

Conread position: 1-270
Cow position: chr6:60379387-60379116 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:61829453-61829182 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:62664999-62664728 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:66188576-66188847 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:67173779-67173508 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:67553456-67553186 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr6:68030403-68030132 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-273
Cow position: chr6:27526739-27527008 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 113

Conread position: 1-273
Cow position: chr6:40550476-40550748 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 168

Conread position: 1-273
Cow position: chr6:47039985-47040258 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr6:478774-478500 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr6:917267-916993 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr6:1536929-1536655 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 167

Conread position: 1-274
Cow position: chr6:5946551-5946826 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr6:6182484-6182758 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-274
Cow position: chr6:8536071-8536345 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 149

Conread position: 1-274
Cow position: chr6:11289242-11289506 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 49, 173

Conread position: 1-274
Cow position: chr6:15276016-15276289 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr6:20451184-20450910 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr6:20553017-20553290 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr6:30269679-30269953 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 167

Conread position: 1-274
Cow position: chr6:34493899-34493625 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr6:34504297-34504571 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr6:34843489-34843763 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr6:41192550-41192276 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr6:43187333-43187055 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 49, 175

Conread position: 1-274
Cow position: chr6:43790352-43790628 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 170

Conread position: 1-274
Cow position: chr6:48875116-48875381 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 202
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 49, 145

Conread position: 1-274
Cow position: chr6:50485560-50485823 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 105

Conread position: 1-274
Cow position: chr6:51717779-51717505 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr6:58031001-58030730 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 88

Conread position: 1-274
Cow position: chr6:60332567-60332293 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr6:60876520-60876250 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 95

Conread position: 1-274
Cow position: chr6:65875060-65875332 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 59, 41

Conread position: 1-277
Cow position: chr6:28160633-28160356 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-277
Cow position: chr6:43620955-43620678 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-288
Cow position: chr6:9738030-9738318 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 124

Conread position: 1-301
Cow position: chr6:3485195-3485502 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 113

Conread position: 1-301
Cow position: chr6:45479864-45480180 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-312
Cow position: chr6:27173053-27172737 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 166

Conread position: 1-312
Cow position: chr6:55474530-55474216 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 2-180
Cow position: chr6:39136727-39136545 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 48, 172

Conread position: 2-267
Cow position: chr6:60167335-60167603 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 48, 168

Conread position: 2-270
Cow position: chr6:25357638-25357907 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 170

Conread position: 2-270
Cow position: chr6:28065214-28064944 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 170

Conread position: 2-270
Cow position: chr6:33984039-33983776 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 204
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 51, 40

Conread position: 2-270
Cow position: chr6:45937514-45937251 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 101

Conread position: 2-325
Cow position: chr6:4903773-4904085 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 104, 42

Conread position: 3-152
Cow position: chr6:28112834-28112986 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 3-167
Cow position: chr6:6944721-6944884 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 57, 9

Conread position: 3-205
Cow position: chr6:224282-224490 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 14, 171

Conread position: 3-264
Cow position: chr6:43797679-43797953 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 3-270
Cow position: chr6:10236418-10236149 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 169

Conread position: 3-272
Cow position: chr6:7138119-7138389 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 168

Conread position: 3-273
Cow position: chr6:11168729-11168457 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 166

Conread position: 3-273
Cow position: chr6:16703521-16703793 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 169

Conread position: 3-302
Cow position: chr6:18970218-18970510 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 58

Conread position: 4-249
Cow position: chr6:2618345-2618588 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 168

Conread position: 4-264
Cow position: chr6:58016570-58016315 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 82

Conread position: 4-270
Cow position: chr6:40760242-40759983 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 98

Conread position: 5-240
Cow position: chr6:64426011-64425775 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 166

Conread position: 5-270
Cow position: chr6:41408625-41408358 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 164

Conread position: 5-270
Cow position: chr6:43087376-43087639 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 45, 111

Conread position: 5-274
Cow position: chr6:17049593-17049320 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 163

Conread position: 5-301
Cow position: chr6:2367041-2367345 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 212
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 45, 164

Conread position: 6-270
Cow position: chr6:35416753-35417007 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 44, 90

Conread position: 7-270
Cow position: chr6:24632027-24632294 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 84

Conread position: 8-267
Cow position: chr6:50113897-50113646 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 42, 17

Conread position: 8-267
Cow position: chr6:65049454-65049703 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 199, 42

Conread position: 12-242
Cow position: chr6:17556457-17556691 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 162

Conread position: 13-272
Cow position: chr6:1888236-1888486 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 31

Conread position: 14-270
Cow position: chr6:10650582-10650835 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 87

Conread position: 14-301
Cow position: chr6:13308185-13308489 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 224
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 36, 122

Conread position: 14-316
Cow position: chr6:529678-529982 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 159

Conread position: 16-270
Cow position: chr6:28185110-28185377 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 167

Conread position: 25-271
Cow position: chr6:27341799-27341553 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 163
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 81, 142

Show alignments to all cow chromosomes.