Cow genome map

Conread name: Mixn-0023l11

Conread position: 1-107
Cow position: chr9:25596805-25596697 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 1-116
Cow position: chr9:35624467-35624349 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 1-120
Cow position: chr9:50003876-50003754 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 1-132
Cow position: chr9:3052418-3052285 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 129

Conread position: 1-133
Cow position: chr9:36829899-36830033 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 49, 130

Conread position: 1-136
Cow position: chr9:15802552-15802414 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 1-140
Cow position: chr9:18710646-18710504 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 1-148
Cow position: chr9:4191434-4191284 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 1-148
Cow position: chr9:43494201-43494051 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 123
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 1-155
Cow position: chr9:8282117-8282272 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 12

Conread position: 1-155
Cow position: chr9:22803498-22803656 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 1-155
Cow position: chr9:62818068-62818225 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 1-156
Cow position: chr9:60409555-60409396 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 1-166
Cow position: chr9:4673208-4673047 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 49, 65

Conread position: 1-167
Cow position: chr9:50326849-50326681 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 140
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 49, 54

Conread position: 1-167
Cow position: chr9:59496030-59496199 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 140
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 49, 0

Conread position: 1-186
Cow position: chr9:174620-174807 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 149
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 49, 171

Conread position: 1-191
Cow position: chr9:51178516-51178707 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 49, 167

Conread position: 1-212
Cow position: chr9:9872092-9871879 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-213
Cow position: chr9:33843476-33843263 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 170
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 49, 154

Conread position: 1-214
Cow position: chr9:382736-382951 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 49, 171

Conread position: 1-215
Cow position: chr9:9210296-9210080 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-215
Cow position: chr9:18830891-18830677 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 170
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 105

Conread position: 1-215
Cow position: chr9:38679269-38679055 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 168
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 49, 12

Conread position: 1-235
Cow position: chr9:13187357-13187121 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-238
Cow position: chr9:17588291-17588050 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 186
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 48, 173

Conread position: 1-238
Cow position: chr9:23526909-23526674 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 49, 72

Conread position: 1-240
Cow position: chr9:34238606-34238847 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 49, 171

Conread position: 1-242
Cow position: chr9:7058897-7059140 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-247
Cow position: chr9:7005894-7005646 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-248
Cow position: chr9:18109855-18109605 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 116

Conread position: 1-248
Cow position: chr9:37182015-37181766 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-253
Cow position: chr9:42868720-42868969 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 125

Conread position: 1-254
Cow position: chr9:12285555-12285809 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 54

Conread position: 1-262
Cow position: chr9:1838108-1837845 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-262
Cow position: chr9:2548542-2548805 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 171

Conread position: 1-262
Cow position: chr9:22319262-22319524 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 169

Conread position: 1-262
Cow position: chr9:56862012-56862263 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 49, 94

Conread position: 1-263
Cow position: chr9:4940346-4940609 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 171

Conread position: 1-264
Cow position: chr9:5627972-5627707 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-264
Cow position: chr9:6707765-6708029 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 168

Conread position: 1-264
Cow position: chr9:10567211-10567478 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 173

Conread position: 1-264
Cow position: chr9:28024972-28024707 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 171

Conread position: 1-264
Cow position: chr9:37158457-37158722 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-265
Cow position: chr9:9021452-9021718 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 171

Conread position: 1-265
Cow position: chr9:43225548-43225814 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-266
Cow position: chr9:23421739-23421479 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 43

Conread position: 1-267
Cow position: chr9:17633640-17633365 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 49, 175

Conread position: 1-267
Cow position: chr9:30401435-30401170 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 95

Conread position: 1-267
Cow position: chr9:62443824-62444090 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 75

Conread position: 1-270
Cow position: chr9:217963-218233 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 49, 173

Conread position: 1-270
Cow position: chr9:777660-777932 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 172

Conread position: 1-270
Cow position: chr9:1062543-1062813 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 69

Conread position: 1-270
Cow position: chr9:1071131-1071402 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr9:1099747-1099476 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr9:1248844-1249115 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr9:2214292-2214015 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 49, 177

Conread position: 1-270
Cow position: chr9:2834847-2835114 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr9:2856997-2856726 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr9:3997607-3997876 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 49, 149

Conread position: 1-270
Cow position: chr9:5430619-5430349 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 124

Conread position: 1-270
Cow position: chr9:5452487-5452758 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr9:6550330-6550059 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr9:10939877-10939604 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 113

Conread position: 1-270
Cow position: chr9:13312716-13312447 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr9:14003190-14002922 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-270
Cow position: chr9:17017907-17017636 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr9:26325899-26325628 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 171

Conread position: 1-270
Cow position: chr9:27898159-27897890 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 48, 171

Conread position: 1-270
Cow position: chr9:28785497-28785224 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr9:30139458-30139724 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 43

Conread position: 1-270
Cow position: chr9:31417363-31417633 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 162

Conread position: 1-270
Cow position: chr9:37174252-37174523 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr9:39303400-39303671 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr9:41312888-41313159 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr9:43496287-43496016 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr9:44168742-44168471 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr9:44202927-44203198 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr9:45792001-45791730 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr9:45876671-45876399 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr9:46627464-46627193 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 171

Conread position: 1-270
Cow position: chr9:46667645-46667918 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr9:47045100-47044829 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr9:47171206-47170930 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 172

Conread position: 1-270
Cow position: chr9:48795139-48795410 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr9:50840585-50840315 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 134

Conread position: 1-270
Cow position: chr9:51692467-51692738 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr9:52402112-52401841 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr9:54459349-54459620 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 171

Conread position: 1-270
Cow position: chr9:54995788-54995519 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 106, 49

Conread position: 1-270
Cow position: chr9:56176923-56176652 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-270
Cow position: chr9:64012076-64012347 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-273
Cow position: chr9:35398-35668 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 207
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 47, 124

Conread position: 1-273
Cow position: chr9:17302825-17303093 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 60

Conread position: 1-274
Cow position: chr9:5007126-5006860 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr9:6252721-6252447 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr9:6365530-6365256 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-274
Cow position: chr9:6764619-6764893 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr9:9016227-9015953 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr9:10857173-10856899 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr9:18506671-18506945 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr9:19156139-19156414 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr9:21412463-21412191 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 43

Conread position: 1-274
Cow position: chr9:22655964-22655691 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr9:24918135-24918409 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 17

Conread position: 1-274
Cow position: chr9:27038260-27037987 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 114

Conread position: 1-274
Cow position: chr9:28657899-28658170 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 106

Conread position: 1-274
Cow position: chr9:30675228-30674954 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr9:32972520-32972246 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr9:38633935-38633659 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 75

Conread position: 1-274
Cow position: chr9:40143198-40143465 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 125

Conread position: 1-274
Cow position: chr9:42570367-42570095 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-274
Cow position: chr9:53776846-53776580 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 49, 83

Conread position: 1-274
Cow position: chr9:54413456-54413728 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 113

Conread position: 1-274
Cow position: chr9:55031658-55031394 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 49, 84

Conread position: 1-274
Cow position: chr9:59197009-59196736 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 95

Conread position: 1-274
Cow position: chr9:59479695-59479969 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-276
Cow position: chr9:2873627-2873351 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-277
Cow position: chr9:3545980-3545703 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 174

Conread position: 1-277
Cow position: chr9:22442644-22442365 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 211
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 49, 178

Conread position: 1-277
Cow position: chr9:28681353-28681076 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-300
Cow position: chr9:1991399-1991709 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 171

Conread position: 1-316
Cow position: chr9:37253557-37253236 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 1-326
Cow position: chr9:52526304-52525978 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 2-186
Cow position: chr9:9491789-9491975 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 12, 126

Conread position: 2-186
Cow position: chr9:34900619-34900432 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 149
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 48, 170

Conread position: 3-134
Cow position: chr9:34917770-34917636 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 3-186
Cow position: chr9:27781761-27781946 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 149
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 47, 163

Conread position: 3-209
Cow position: chr9:1519743-1519540 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 48, 94

Conread position: 3-270
Cow position: chr9:2595808-2595547 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 56, 102

Conread position: 3-270
Cow position: chr9:3806745-3806480 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 33

Conread position: 3-270
Cow position: chr9:15052738-15052998 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 47, 84

Conread position: 3-270
Cow position: chr9:33068349-33068613 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 187
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 121, 41

Conread position: 3-270
Cow position: chr9:43856387-43856655 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 47, 148

Conread position: 3-270
Cow position: chr9:46525055-46525324 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 47, 168

Conread position: 4-264
Cow position: chr9:2208519-2208780 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 159

Conread position: 4-264
Cow position: chr9:3756680-3756943 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 169

Conread position: 4-311
Cow position: chr9:9958034-9958346 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 170

Conread position: 5-162
Cow position: chr9:60589919-60589760 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 109

Conread position: 5-167
Cow position: chr9:19545660-19545495 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 134
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 5-265
Cow position: chr9:22570254-22569992 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 167

Conread position: 5-267
Cow position: chr9:3960034-3960282 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 43, 69

Conread position: 5-279
Cow position: chr9:2484468-2484743 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 167

Conread position: 7-272
Cow position: chr9:15987152-15986889 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 198
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 43, 71

Conread position: 8-270
Cow position: chr9:43667974-43667712 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 64

Conread position: 8-270
Cow position: chr9:51010707-51010449 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 138

Conread position: 11-254
Cow position: chr9:19302914-19303159 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 161

Conread position: 14-270
Cow position: chr9:7104091-7104349 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 158

Show alignments to all cow chromosomes.