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Cow genome map

           
Conread name:
           
Mixn-0029m24
        

               
Conread position:
               
2-240
               

               
Cow position:
               
chr13:21904920-21904678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr13:43629516-43629761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
2-445
               

               
Cow position:
               
chr13:9974809-9975275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr13:22775051-22775329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
3-316
               

               
Cow position:
               
chr13:48251733-48252036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
152, 45
               

               
Conread position:
               
3-317
               

               
Cow position:
               
chr13:30693960-30693656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
118, 45
               

               
Conread position:
               
3-326
               

               
Cow position:
               
chr13:22780204-22779892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
223, 36
               

               
Conread position:
               
3-326
               

               
Cow position:
               
chr13:52922347-52922031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
109, 45
               

               
Conread position:
               
3-343
               

               
Cow position:
               
chr13:33631379-33631045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
114, 45
               

               
Conread position:
               
3-350
               

               
Cow position:
               
chr13:11954856-11955208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
126, 28
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr13:52879669-52879300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
117, 37
               

               
Conread position:
               
3-378
               

               
Cow position:
               
chr13:15974869-15974498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 38
               

               
Conread position:
               
3-392
               

               
Cow position:
               
chr13:16015064-16014677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 13
               

               
Conread position:
               
3-398
               

               
Cow position:
               
chr13:25927051-25926650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 45
               

               
Conread position:
               
3-402
               

               
Cow position:
               
chr13:56148798-56148377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 44
               

               
Conread position:
               
3-402
               

               
Cow position:
               
chr13:56160169-56160590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 44
               

               
Conread position:
               
3-404
               

               
Cow position:
               
chr13:45022949-45023355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 38
               

               
Conread position:
               
3-407
               

               
Cow position:
               
chr13:14063269-14063670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 45
               

               
Conread position:
               
3-421
               

               
Cow position:
               
chr13:52285074-52284656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 37
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr13:4664602-4665059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 245
               

               
Conread position:
               
3-457
               

               
Cow position:
               
chr13:15945759-15945273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
101, 45
               

               
Conread position:
               
3-458
               

               
Cow position:
               
chr13:29631111-29630672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
3-460
               

               
Cow position:
               
chr13:9665334-9664860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
97, 45
               

               
Conread position:
               
3-461
               

               
Cow position:
               
chr13:1959268-1958801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 45
               

               
Conread position:
               
3-461
               

               
Cow position:
               
chr13:9246973-9246524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 45
               

               
Conread position:
               
3-461
               

               
Cow position:
               
chr13:54095061-54094604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 17
               

               
Conread position:
               
4-253
               

               
Cow position:
               
chr13:14227185-14226935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
116, 44
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr13:25261547-25261840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
21, 194
               

               
Conread position:
               
4-307
               

               
Cow position:
               
chr13:5658473-5658774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
112, 43
               

               
Conread position:
               
4-397
               

               
Cow position:
               
chr13:46736458-46736078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
105, 22
               

               
Conread position:
               
4-405
               

               
Cow position:
               
chr13:17977587-17977207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
18, 8
               

               
Conread position:
               
4-405
               

               
Cow position:
               
chr13:23856475-23856064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 46
               

               
Conread position:
               
4-405
               

               
Cow position:
               
chr13:26261536-26261933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
124, 47
               

               
Conread position:
               
4-457
               

               
Cow position:
               
chr13:43594858-43595298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
116, 45
               

               
Conread position:
               
5-389
               

               
Cow position:
               
chr13:46311781-46312142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
115, 11
               

               
Conread position:
               
5-445
               

               
Cow position:
               
chr13:16343943-16343503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
115, 43
               

               
Conread position:
               
5-452
               

               
Cow position:
               
chr13:12926047-12925582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 44
               

               
Conread position:
               
6-218
               

               
Cow position:
               
chr13:37985495-37985721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
114, 41
               

               
Conread position:
               
6-311
               

               
Cow position:
               
chr13:9107831-9107536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
220, 34
               

               
Conread position:
               
6-389
               

               
Cow position:
               
chr13:11460877-11460503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 10
               

               
Conread position:
               
6-393
               

               
Cow position:
               
chr13:43762423-43762034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 201
               

               
Conread position:
               
6-404
               

               
Cow position:
               
chr13:3315419-3315821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 11
               

               
Conread position:
               
6-459
               

               
Cow position:
               
chr13:46284363-46284811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
7-405
               

               
Cow position:
               
chr13:1231903-1231495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
115, 41
               

               
Conread position:
               
7-405
               

               
Cow position:
               
chr13:23479284-23478883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 42
               

               
Conread position:
               
8-200
               

               
Cow position:
               
chr13:11290566-11290765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
95, 40
               

               
Conread position:
               
8-218
               

               
Cow position:
               
chr13:26697850-26698068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
120, 39
               

               
Conread position:
               
8-294
               

               
Cow position:
               
chr13:24060098-24060371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
8-384
               

               
Cow position:
               
chr13:47356884-47356527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
36, 117
               

               
Conread position:
               
8-389
               

               
Cow position:
               
chr13:311684-311308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
112, 40
               

               
Conread position:
               
8-405
               

               
Cow position:
               
chr13:21107378-21107000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
184, 40
               

               
Conread position:
               
8-405
               

               
Cow position:
               
chr13:34728585-34728984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
112, 32
               

               
Conread position:
               
8-405
               

               
Cow position:
               
chr13:57002993-57002581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
36, 244
               

               
Conread position:
               
8-405
               

               
Cow position:
               
chr13:60508864-60509265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 8
               

               
Conread position:
               
8-407
               

               
Cow position:
               
chr13:6974417-6974013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 8
               

               
Conread position:
               
8-453
               

               
Cow position:
               
chr13:17158612-17159068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
65, 40
               

               
Conread position:
               
8-456
               

               
Cow position:
               
chr13:34995072-34995530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 40
               

               
Conread position:
               
9-202
               

               
Cow position:
               
chr13:1011585-1011379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
111, 39
               

               
Conread position:
               
9-290
               

               
Cow position:
               
chr13:3701685-3701408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
119, 38
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr13:18215682-18215407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
40, 98
               

               
Conread position:
               
9-307
               

               
Cow position:
               
chr13:19178529-19178224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
111, 39
               

               
Conread position:
               
9-350
               

               
Cow position:
               
chr13:6759537-6759880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
111, 40
               

               
Conread position:
               
9-356
               

               
Cow position:
               
chr13:19138690-19138343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
119, 40
               

               
Conread position:
               
9-387
               

               
Cow position:
               
chr13:23269960-23270333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 39
               

               
Conread position:
               
9-405
               

               
Cow position:
               
chr13:12546654-12547053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 40
               

               
Conread position:
               
9-405
               

               
Cow position:
               
chr13:50690139-50690544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
108, 39
               

               
Conread position:
               
9-407
               

               
Cow position:
               
chr13:10988821-10989223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
103, 43
               

               
Conread position:
               
9-407
               

               
Cow position:
               
chr13:38329886-38329469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
9-457
               

               
Cow position:
               
chr13:17613599-17613143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
114, 39
               

               
Conread position:
               
10-182
               

               
Cow position:
               
chr13:48629242-48629067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
112, 38
               

               
Conread position:
               
10-202
               

               
Cow position:
               
chr13:32949751-32949957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-206
               

               
Cow position:
               
chr13:15740318-15740113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
112, 38
               

               
Conread position:
               
10-225
               

               
Cow position:
               
chr13:20537835-20537630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
126, 38
               

               
Conread position:
               
10-226
               

               
Cow position:
               
chr13:54381683-54381907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
113, 37
               

               
Conread position:
               
10-229
               

               
Cow position:
               
chr13:6606768-6606996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
82, 166
               

               
Conread position:
               
10-273
               

               
Cow position:
               
chr13:14544374-14544102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
10-291
               

               
Cow position:
               
chr13:13266053-13265774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
102, 37
               

               
Conread position:
               
10-297
               

               
Cow position:
               
chr13:5752171-5752464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
102, 38
               

               
Conread position:
               
10-297
               

               
Cow position:
               
chr13:12682289-12682584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
112, 38
               

               
Conread position:
               
10-300
               

               
Cow position:
               
chr13:33517672-33517966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-323
               

               
Cow position:
               
chr13:41253865-41253557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
122, 14
               

               
Conread position:
               
10-333
               

               
Cow position:
               
chr13:19426446-19426772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
121, 38
               

               
Conread position:
               
10-338
               

               
Cow position:
               
chr13:17855626-17855293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
10-340
               

               
Cow position:
               
chr13:31808764-31808440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
113, 38
               

               
Conread position:
               
10-342
               

               
Cow position:
               
chr13:60330003-60329676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
110, 140
               

               
Conread position:
               
10-347
               

               
Cow position:
               
chr13:20605867-20606205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
113, 38
               

               
Conread position:
               
10-347
               

               
Cow position:
               
chr13:42860318-42860658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
87, 38
               

               
Conread position:
               
10-348
               

               
Cow position:
               
chr13:58043880-58043539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
110, 37
               

               
Conread position:
               
10-349
               

               
Cow position:
               
chr13:19023587-19023938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 38
               

               
Conread position:
               
10-349
               

               
Cow position:
               
chr13:30651427-30651098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
112, 38
               

               
Conread position:
               
10-349
               

               
Cow position:
               
chr13:41918914-41919246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
103, 27
               

               
Conread position:
               
10-351
               

               
Cow position:
               
chr13:40652185-40651842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-375
               

               
Cow position:
               
chr13:6153527-6153900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
10-381
               

               
Cow position:
               
chr13:18835438-18835082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 38
               

               
Conread position:
               
10-387
               

               
Cow position:
               
chr13:6086649-6087020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
107, 30
               

               
Conread position:
               
10-387
               

               
Cow position:
               
chr13:12574886-12574507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
105, 38
               

               
Conread position:
               
10-387
               

               
Cow position:
               
chr13:15167070-15166690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
10-389
               

               
Cow position:
               
chr13:11820829-11820469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
295, 23
               

               
Conread position:
               
10-395
               

               
Cow position:
               
chr13:10928738-10929123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
108, 41
               

               
Conread position:
               
10-400
               

               
Cow position:
               
chr13:20563248-20562853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 20
               

               
Conread position:
               
10-404
               

               
Cow position:
               
chr13:18166982-18166584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-405
               

               
Cow position:
               
chr13:12875733-12876117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 38
               

               
Conread position:
               
10-405
               

               
Cow position:
               
chr13:21287838-21288232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-405
               

               
Cow position:
               
chr13:34281932-34281531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 38
               

               
Conread position:
               
10-405
               

               
Cow position:
               
chr13:47756627-47756218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
112, 234
               

               
Conread position:
               
10-406
               

               
Cow position:
               
chr13:27525010-27525408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 37
               

               
Conread position:
               
10-407
               

               
Cow position:
               
chr13:971646-972046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 38
               

               
Conread position:
               
10-407
               

               
Cow position:
               
chr13:8362494-8362896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
118, 38
               

               
Conread position:
               
10-407
               

               
Cow position:
               
chr13:20666136-20666535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 38
               

               
Conread position:
               
10-407
               

               
Cow position:
               
chr13:25817765-25817380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
10-407
               

               
Cow position:
               
chr13:41807027-41806623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 37
               

               
Conread position:
               
10-407
               

               
Cow position:
               
chr13:52057793-52057408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 100
               

               
Conread position:
               
10-407
               

               
Cow position:
               
chr13:52894394-52893996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
91, 42
               

               
Conread position:
               
10-407
               

               
Cow position:
               
chr13:54702442-54702030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 38
               

               
Conread position:
               
10-426
               

               
Cow position:
               
chr13:46516317-46515895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
90, 42
               

               
Conread position:
               
10-428
               

               
Cow position:
               
chr13:15872701-15872275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
120, 39
               

               
Conread position:
               
10-429
               

               
Cow position:
               
chr13:6616496-6616929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-432
               

               
Cow position:
               
chr13:60429827-60430251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 39
               

               
Conread position:
               
10-438
               

               
Cow position:
               
chr13:57493932-57494373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 37
               

               
Conread position:
               
10-445
               

               
Cow position:
               
chr13:15446298-15445842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
93, 38
               

               
Conread position:
               
10-447
               

               
Cow position:
               
chr13:25434877-25435315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 38
               

               
Conread position:
               
10-448
               

               
Cow position:
               
chr13:20784840-20784384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 38
               

               
Conread position:
               
10-448
               

               
Cow position:
               
chr13:60967016-60966569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
99, 38
               

               
Conread position:
               
10-452
               

               
Cow position:
               
chr13:17886753-17886321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
87, 49
               

               
Conread position:
               
10-455
               

               
Cow position:
               
chr13:15234162-15233728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
119, 39
               

               
Conread position:
               
10-459
               

               
Cow position:
               
chr13:32283379-32282932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
83, 41
               

               
Conread position:
               
10-461
               

               
Cow position:
               
chr13:20863769-20864205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
112, 30
               

               
Conread position:
               
11-340
               

               
Cow position:
               
chr13:13306357-13306015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
65, 37
               

               
Conread position:
               
11-347
               

               
Cow position:
               
chr13:44626631-44626280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
86, 37
               

               
Conread position:
               
11-378
               

               
Cow position:
               
chr13:18989956-18989604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
86, 37
               

               
Conread position:
               
11-387
               

               
Cow position:
               
chr13:31814118-31813747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 17
               

               
Conread position:
               
11-393
               

               
Cow position:
               
chr13:56154910-56155286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 37
               

               
Conread position:
               
11-397
               

               
Cow position:
               
chr13:39952163-39952553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
11-405
               

               
Cow position:
               
chr13:36771171-36771564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 98
               

               
Conread position:
               
11-405
               

               
Cow position:
               
chr13:51528195-51528587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 37
               

               
Conread position:
               
11-407
               

               
Cow position:
               
chr13:32017272-32017665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
109, 38
               

               
Conread position:
               
11-412
               

               
Cow position:
               
chr13:21276106-21275707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 37
               

               
Conread position:
               
11-458
               

               
Cow position:
               
chr13:25537892-25537418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
76, 37
               

               
Conread position:
               
12-217
               

               
Cow position:
               
chr13:38485080-38484870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
98, 35
               

               
Conread position:
               
12-233
               

               
Cow position:
               
chr13:1767017-1766794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
12-238
               

               
Cow position:
               
chr13:21708431-21708204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
12-267
               

               
Cow position:
               
chr13:37516886-37517145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr13:47313153-47312888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
208, 32
               

               
Conread position:
               
12-358
               

               
Cow position:
               
chr13:18244106-18243763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 36
               

               
Conread position:
               
12-361
               

               
Cow position:
               
chr13:25531538-25531892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
12-375
               

               
Cow position:
               
chr13:17622534-17622173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 36
               

               
Conread position:
               
12-389
               

               
Cow position:
               
chr13:20683873-20684258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 36
               

               
Conread position:
               
12-393
               

               
Cow position:
               
chr13:38277887-38278282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
12-396
               

               
Cow position:
               
chr13:9142532-9142143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
121, 34
               

               
Conread position:
               
12-405
               

               
Cow position:
               
chr13:44202239-44201864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
115, 37
               

               
Conread position:
               
12-405
               

               
Cow position:
               
chr13:61976715-61977095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 36
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr13:19393537-19393143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 36
               

               
Conread position:
               
12-455
               

               
Cow position:
               
chr13:6079169-6079621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
12-459
               

               
Cow position:
               
chr13:12233206-12233656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
108, 159
               

               
Conread position:
               
12-459
               

               
Cow position:
               
chr13:12448740-12449202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 38
               

               
Conread position:
               
13-350
               

               
Cow position:
               
chr13:47863450-47863793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
13-382
               

               
Cow position:
               
chr13:889930-890294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
334, 35
               

               
Conread position:
               
13-395
               

               
Cow position:
               
chr13:47007489-47007852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 33
               

               
Conread position:
               
13-407
               

               
Cow position:
               
chr13:11260500-11260128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 7
               

               
Conread position:
               
13-407
               

               
Cow position:
               
chr13:46525194-46525578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
108, 34
               

               
Conread position:
               
13-457
               

               
Cow position:
               
chr13:24715486-24715030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 44
               

               
Conread position:
               
13-461
               

               
Cow position:
               
chr13:32717622-32718070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
30, 156
               

               
Conread position:
               
14-405
               

               
Cow position:
               
chr13:2414273-2413882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 26
               

               
Conread position:
               
14-459
               

               
Cow position:
               
chr13:52585773-52586241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 33
               

               
Conread position:
               
15-459
               

               
Cow position:
               
chr13:10932799-10932352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
107, 34
               

               
Conread position:
               
17-227
               

               
Cow position:
               
chr13:54418477-54418258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
106, 31
               

               
Conread position:
               
17-238
               

               
Cow position:
               
chr13:27027524-27027757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
100, 34
               

               
Conread position:
               
17-267
               

               
Cow position:
               
chr13:15172162-15172422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
98, 31
               

               
Conread position:
               
17-345
               

               
Cow position:
               
chr13:61166212-61166536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
80, 75
               

               
Conread position:
               
17-377
               

               
Cow position:
               
chr13:7663184-7663540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 37
               

               
Conread position:
               
17-387
               

               
Cow position:
               
chr13:17970790-17971157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 30
               

               
Conread position:
               
17-387
               

               
Cow position:
               
chr13:21176079-21176447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 34
               

               
Conread position:
               
17-393
               

               
Cow position:
               
chr13:13501377-13501752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 32
               

               
Conread position:
               
17-457
               

               
Cow position:
               
chr13:20880681-20881140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 320
               

               
Conread position:
               
17-461
               

               
Cow position:
               
chr13:21241847-21242299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 31
               

               
Conread position:
               
18-194
               

               
Cow position:
               
chr13:13344198-13344019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
105, 30
               

               
Conread position:
               
18-226
               

               
Cow position:
               
chr13:17994170-17993959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
18-307
               

               
Cow position:
               
chr13:55295382-55295675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
94, 29
               

               
Conread position:
               
18-314
               

               
Cow position:
               
chr13:20440359-20440636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
229, 30
               

               
Conread position:
               
18-343
               

               
Cow position:
               
chr13:26382987-26383319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
18-345
               

               
Cow position:
               
chr13:34375499-34375173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
18-347
               

               
Cow position:
               
chr13:34035612-34035279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
18-348
               

               
Cow position:
               
chr13:52284153-52283823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr13:1155464-1155793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
105, 33
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr13:60599698-60600021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
18-377
               

               
Cow position:
               
chr13:12670201-12670569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
18-391
               

               
Cow position:
               
chr13:13261252-13260871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
106, 31
               

               
Conread position:
               
18-393
               

               
Cow position:
               
chr13:37981511-37981878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 34
               

               
Conread position:
               
18-397
               

               
Cow position:
               
chr13:13766010-13765651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
79, 28
               

               
Conread position:
               
18-400
               

               
Cow position:
               
chr13:4553043-4552677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
102, 33
               

               
Conread position:
               
18-404
               

               
Cow position:
               
chr13:9587337-9587727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
18-404
               

               
Cow position:
               
chr13:35525970-35526341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 127
               

               
Conread position:
               
18-404
               

               
Cow position:
               
chr13:45353286-45352885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 22
               

               
Conread position:
               
18-405
               

               
Cow position:
               
chr13:23960562-23960949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
18-405
               

               
Cow position:
               
chr13:24155784-24155369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
138, 29
               

               
Conread position:
               
18-405
               

               
Cow position:
               
chr13:26479970-26480351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
99, 30
               

               
Conread position:
               
18-405
               

               
Cow position:
               
chr13:33352123-33352498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
100, 30
               

               
Conread position:
               
18-405
               

               
Cow position:
               
chr13:35659997-35659614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 30
               

               
Conread position:
               
18-405
               

               
Cow position:
               
chr13:37382055-37381654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 242
               

               
Conread position:
               
18-406
               

               
Cow position:
               
chr13:37484026-37484425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 30
               

               
Conread position:
               
18-407
               

               
Cow position:
               
chr13:1042712-1043109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 30
               

               
Conread position:
               
18-407
               

               
Cow position:
               
chr13:22115947-22115525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
138, 29
               

               
Conread position:
               
18-412
               

               
Cow position:
               
chr13:21235441-21235821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
18-421
               

               
Cow position:
               
chr13:60974319-60973919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 34
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr13:53566840-53566439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 29
               

               
Conread position:
               
18-445
               

               
Cow position:
               
chr13:17821016-17821465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 29
               

               
Conread position:
               
18-447
               

               
Cow position:
               
chr13:32167063-32167502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
18-448
               

               
Cow position:
               
chr13:21155245-21155668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
102, 31
               

               
Conread position:
               
18-460
               

               
Cow position:
               
chr13:12283079-12282615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
102, 34
               

               
Conread position:
               
18-461
               

               
Cow position:
               
chr13:24754128-24753671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
19-226
               

               
Cow position:
               
chr13:55843727-55843509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
19-331
               

               
Cow position:
               
chr13:24376733-24376421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 29
               

               
Conread position:
               
19-337
               

               
Cow position:
               
chr13:41154803-41155112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
207, 29
               

               
Conread position:
               
19-349
               

               
Cow position:
               
chr13:25062653-25062323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
103, 35
               

               
Conread position:
               
19-380
               

               
Cow position:
               
chr13:6060767-6061129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 11
               

               
Conread position:
               
19-397
               

               
Cow position:
               
chr13:56686670-56686296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 30
               

               
Conread position:
               
19-416
               

               
Cow position:
               
chr13:20705960-20706363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 30
               

               
Conread position:
               
19-461
               

               
Cow position:
               
chr13:52251543-52252005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 29
               

               
Conread position:
               
20-456
               

               
Cow position:
               
chr13:17745483-17745040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
21-283
               

               
Cow position:
               
chr13:37945976-37946230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
141, 14
               

               
Conread position:
               
21-403
               

               
Cow position:
               
chr13:13089267-13088885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 29
               

               
Conread position:
               
21-405
               

               
Cow position:
               
chr13:20378097-20378469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
22-460
               

               
Cow position:
               
chr13:12990088-12989640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 27
               

               
Conread position:
               
23-288
               

               
Cow position:
               
chr13:54093979-54093716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
94, 25
               

               
Conread position:
               
23-407
               

               
Cow position:
               
chr13:42200857-42200471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 24
               

               
Conread position:
               
25-247
               

               
Cow position:
               
chr13:17816008-17815779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
88, 23
               

               
Conread position:
               
25-425
               

               
Cow position:
               
chr13:55315952-55316363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 23
               

               
Conread position:
               
25-435
               

               
Cow position:
               
chr13:60650683-60651086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 54
               

               
Conread position:
               
25-455
               

               
Cow position:
               
chr13:52199326-52198888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
96, 6
               

               
Conread position:
               
26-226
               

               
Cow position:
               
chr13:34556096-34556307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
71, 78
               

               
Conread position:
               
26-248
               

               
Cow position:
               
chr13:60690483-60690718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
14, 8
               

               
Conread position:
               
26-262
               

               
Cow position:
               
chr13:38012597-38012350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
26-266
               

               
Cow position:
               
chr13:2339665-2339429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
100, 13
               

               
Conread position:
               
26-323
               

               
Cow position:
               
chr13:2462995-2463299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
110, 14
               

               
Conread position:
               
26-340
               

               
Cow position:
               
chr13:46324552-46324870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 209
               

               
Conread position:
               
26-343
               

               
Cow position:
               
chr13:53536070-53536392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
120, 23
               

               
Conread position:
               
26-349
               

               
Cow position:
               
chr13:15622043-15621721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
97, 22
               

               
Conread position:
               
26-349
               

               
Cow position:
               
chr13:33875898-33875585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
26-349
               

               
Cow position:
               
chr13:42114257-42113929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
94, 25
               

               
Conread position:
               
26-350
               

               
Cow position:
               
chr13:32535889-32535566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
26-351
               

               
Cow position:
               
chr13:34941421-34941742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
26-367
               

               
Cow position:
               
chr13:8201249-8201591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
26-374
               

               
Cow position:
               
chr13:34263137-34263485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 22
               

               
Conread position:
               
26-379
               

               
Cow position:
               
chr13:8524385-8524743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 150
               

               
Conread position:
               
26-387
               

               
Cow position:
               
chr13:12614496-12614125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
26-387
               

               
Cow position:
               
chr13:48037856-48037495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
26-389
               

               
Cow position:
               
chr13:12408048-12408417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
91, 21
               

               
Conread position:
               
26-389
               

               
Cow position:
               
chr13:16247889-16247519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
26-394
               

               
Cow position:
               
chr13:54331255-54330869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
26-396
               

               
Cow position:
               
chr13:44323139-44322764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 181
               

               
Conread position:
               
26-397
               

               
Cow position:
               
chr13:24586283-24585909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 22
               

               
Conread position:
               
26-400
               

               
Cow position:
               
chr13:28683594-28683222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 21
               

               
Conread position:
               
26-404
               

               
Cow position:
               
chr13:7076492-7076111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 22
               

               
Conread position:
               
26-404
               

               
Cow position:
               
chr13:15869355-15868968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 22
               

               
Conread position:
               
26-405
               

               
Cow position:
               
chr13:16024824-16024439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
26-405
               

               
Cow position:
               
chr13:17114144-17114522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
26-405
               

               
Cow position:
               
chr13:20820605-20820984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 21
               

               
Conread position:
               
26-405
               

               
Cow position:
               
chr13:23166861-23167248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 21
               

               
Conread position:
               
26-405
               

               
Cow position:
               
chr13:25547357-25547727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
26-405
               

               
Cow position:
               
chr13:38872736-38873091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
363, 25
               

               
Conread position:
               
26-405
               

               
Cow position:
               
chr13:51821650-51822019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
26, 132
               

               
Conread position:
               
26-406
               

               
Cow position:
               
chr13:38283748-38284127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
26-407
               

               
Cow position:
               
chr13:17021484-17021874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 23
               

               
Conread position:
               
26-407
               

               
Cow position:
               
chr13:17291895-17292277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
26-407
               

               
Cow position:
               
chr13:19882800-19883183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
26-425
               

               
Cow position:
               
chr13:13176885-13176482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
26-432
               

               
Cow position:
               
chr13:50681573-50681989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
104, 22
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr13:15958857-15958413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
26-452
               

               
Cow position:
               
chr13:20466059-20466482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
155, 26
               

               
Conread position:
               
26-456
               

               
Cow position:
               
chr13:661399-661837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
75, 25
               

               
Conread position:
               
26-456
               

               
Cow position:
               
chr13:7010705-7010275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
26-457
               

               
Cow position:
               
chr13:40722474-40722903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
26-457
               

               
Cow position:
               
chr13:43138993-43139418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
26-458
               

               
Cow position:
               
chr13:33282249-33281803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
68, 21
               

               
Conread position:
               
26-461
               

               
Cow position:
               
chr13:33160780-33161199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
71, 28
               

               
Conread position:
               
27-227
               

               
Cow position:
               
chr13:18551683-18551473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
27-287
               

               
Cow position:
               
chr13:3003682-3003401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
27-288
               

               
Cow position:
               
chr13:34052367-34052618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
27-292
               

               
Cow position:
               
chr13:61170481-61170751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
90, 20
               

               
Conread position:
               
27-307
               

               
Cow position:
               
chr13:20683181-20682901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
97, 21
               

               
Conread position:
               
27-311
               

               
Cow position:
               
chr13:1780069-1779777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
27-387
               

               
Cow position:
               
chr13:15884779-15885148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
27-387
               

               
Cow position:
               
chr13:55673970-55674336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
27-388
               

               
Cow position:
               
chr13:3015933-3016302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
27-404
               

               
Cow position:
               
chr13:10924671-10925065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
88, 43
               

               
Conread position:
               
27-407
               

               
Cow position:
               
chr13:15288691-15289068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 21
               

               
Conread position:
               
27-443
               

               
Cow position:
               
chr13:43194410-43193984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 21
               

               
Conread position:
               
28-382
               

               
Cow position:
               
chr13:4866746-4867094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
125, 47
               

               
Conread position:
               
28-397
               

               
Cow position:
               
chr13:43184638-43185019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 121
               

               
Conread position:
               
29-400
               

               
Cow position:
               
chr13:15349037-15349387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
30-311
               

               
Cow position:
               
chr13:30026345-30026056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
92, 232
               

               
Conread position:
               
30-340
               

               
Cow position:
               
chr13:11821374-11821072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
98, 18
               

               
Conread position:
               
30-349
               

               
Cow position:
               
chr13:45604186-45604506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
115, 18
               

               
Conread position:
               
30-387
               

               
Cow position:
               
chr13:5713526-5713187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
104, 18
               

               
Conread position:
               
30-400
               

               
Cow position:
               
chr13:45726111-45725744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
132, 17
               

               
Conread position:
               
30-401
               

               
Cow position:
               
chr13:15460565-15460919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
232, 18
               

               
Conread position:
               
30-406
               

               
Cow position:
               
chr13:15041240-15041623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
90, 18
               

               
Conread position:
               
30-406
               

               
Cow position:
               
chr13:25695536-25695915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 18
               

               
Conread position:
               
30-407
               

               
Cow position:
               
chr13:47963969-47964330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 18
               

               
Conread position:
               
30-408
               

               
Cow position:
               
chr13:6189398-6189750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
359, 19
               

               
Conread position:
               
30-461
               

               
Cow position:
               
chr13:24369817-24369377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 18
               

               
Conread position:
               
31-232
               

               
Cow position:
               
chr13:21210093-21209884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
31-277
               

               
Cow position:
               
chr13:9884999-9884749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 17
               

               
Conread position:
               
31-283
               

               
Cow position:
               
chr13:51108720-51108467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
92, 21
               

               
Conread position:
               
31-372
               

               
Cow position:
               
chr13:32657575-32657913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
130, 17
               

               
Conread position:
               
31-394
               

               
Cow position:
               
chr13:49805205-49804843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
31-397
               

               
Cow position:
               
chr13:19033778-19033420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
152, 77
               

               
Conread position:
               
31-438
               

               
Cow position:
               
chr13:14220701-14220316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
97, 130
               

               
Conread position:
               
31-444
               

               
Cow position:
               
chr13:59687646-59688069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
11, 211
               

               
Conread position:
               
31-461
               

               
Cow position:
               
chr13:11767810-11768250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
26, 17
               

               
Conread position:
               
32-417
               

               
Cow position:
               
chr13:37069579-37069189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
32-440
               

               
Cow position:
               
chr13:12207273-12206859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
32-445
               

               
Cow position:
               
chr13:8838764-8839171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
72, 16
               

               
Conread position:
               
33-407
               

               
Cow position:
               
chr13:43480290-43479913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
34-387
               

               
Cow position:
               
chr13:54345005-54344653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
82, 211
               

               
Conread position:
               
35-405
               

               
Cow position:
               
chr13:2774352-2773980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 63
               

               
Conread position:
               
35-405
               

               
Cow position:
               
chr13:17439539-17439915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 17
               

               
Conread position:
               
35-407
               

               
Cow position:
               
chr13:14927466-14927113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
270, 13
               

               
Conread position:
               
35-454
               

               
Cow position:
               
chr13:36877300-36876849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
85, 354
               

               
Conread position:
               
35-458
               

               
Cow position:
               
chr13:34261459-34261013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
36-441
               

               
Cow position:
               
chr13:17347034-17346626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
84, 202
               

               
Conread position:
               
37-426
               

               
Cow position:
               
chr13:37592711-37593112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
13, 138
               

               
Conread position:
               
39-381
               

               
Cow position:
               
chr13:12202589-12202240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
39-405
               

               
Cow position:
               
chr13:15281712-15282079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
64, 216
               

               
Conread position:
               
40-334
               

               
Cow position:
               
chr13:37795657-37795383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
80, 69
               

               
Conread position:
               
40-405
               

               
Cow position:
               
chr13:20679568-20679192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 208
               

               
Conread position:
               
40-454
               

               
Cow position:
               
chr13:20839790-20839364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 202
               

               
Conread position:
               
41-222
               

               
Cow position:
               
chr13:22025479-22025675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
34, 120
               

               
Conread position:
               
41-287
               

               
Cow position:
               
chr13:20041739-20041998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
71, 183
               

               
Conread position:
               
41-396
               

               
Cow position:
               
chr13:61990111-61990462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
41-400
               

               
Cow position:
               
chr13:9643663-9644028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
41-404
               

               
Cow position:
               
chr13:43919033-43919408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
38, 224
               

               
Conread position:
               
41-406
               

               
Cow position:
               
chr13:18172562-18172186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 200
               

               
Conread position:
               
41-407
               

               
Cow position:
               
chr13:40491455-40491067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
79, 229
               

               
Conread position:
               
41-412
               

               
Cow position:
               
chr13:13320998-13320644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 40
               

               
Conread position:
               
42-213
               

               
Cow position:
               
chr13:20536721-20536543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
79, 65
               

               
Conread position:
               
42-280
               

               
Cow position:
               
chr13:37980426-37980666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
51, 61
               

               
Conread position:
               
42-281
               

               
Cow position:
               
chr13:562917-563165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 220
               

               
Conread position:
               
42-404
               

               
Cow position:
               
chr13:185729-185386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
42-405
               

               
Cow position:
               
chr13:43868897-43869259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 75
               

               
Conread position:
               
42-406
               

               
Cow position:
               
chr13:15192673-15193034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 205
               

               
Conread position:
               
42-407
               

               
Cow position:
               
chr13:5263065-5263428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
55, 150
               

               
Conread position:
               
42-447
               

               
Cow position:
               
chr13:10845814-10845409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 124
               

               
Conread position:
               
42-458
               

               
Cow position:
               
chr13:18852297-18851868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 198
               

               
Conread position:
               
43-274
               

               
Cow position:
               
chr13:54237566-54237338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
77, 95
               

               
Conread position:
               
43-335
               

               
Cow position:
               
chr13:21039378-21039675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
77, 214
               

               
Conread position:
               
43-349
               

               
Cow position:
               
chr13:7059695-7059372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
43-366
               

               
Cow position:
               
chr13:20649763-20650094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 212
               

               
Conread position:
               
43-385
               

               
Cow position:
               
chr13:11061207-11060861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 198
               

               
Conread position:
               
43-400
               

               
Cow position:
               
chr13:46182008-46181651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 11
               

               
Conread position:
               
43-402
               

               
Cow position:
               
chr13:8609327-8609689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 119
               

               
Conread position:
               
43-403
               

               
Cow position:
               
chr13:18491814-18491451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 37
               

               
Conread position:
               
43-404
               

               
Cow position:
               
chr13:11096392-11096038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
76, 144
               

               
Conread position:
               
43-405
               

               
Cow position:
               
chr13:17800292-17799930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 142
               

               
Conread position:
               
43-405
               

               
Cow position:
               
chr13:42229548-42229166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
72, 170
               

               
Conread position:
               
44-281
               

               
Cow position:
               
chr13:6975571-6975817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
75, 176
               

               
Conread position:
               
44-350
               

               
Cow position:
               
chr13:46458841-46458533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
80, 122
               

               
Conread position:
               
44-405
               

               
Cow position:
               
chr13:57475200-57475556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
80, 14
               

               
Conread position:
               
44-447
               

               
Cow position:
               
chr13:45073716-45074112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
99, 49
               

               
Conread position:
               
44-453
               

               
Cow position:
               
chr13:37818541-37818960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
45-316
               

               
Cow position:
               
chr13:37521162-37521433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
79, 196
               

               
Conread position:
               
45-461
               

               
Cow position:
               
chr13:58525140-58524719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
138, 62
               

               
Conread position:
               
46-459
               

               
Cow position:
               
chr13:51940948-51940525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 203
               

               
Conread position:
               
47-419
               

               
Cow position:
               
chr13:37804095-37803732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
73, 43
               

               
Conread position:
               
47-461
               

               
Cow position:
               
chr13:8245116-8245537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
73, 127
               

               
Conread position:
               
49-347
               

               
Cow position:
               
chr13:53195078-53195369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
69, 185
               

               
Conread position:
               
49-349
               

               
Cow position:
               
chr13:51014966-51015268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 194
               

               
Conread position:
               
49-349
               

               
Cow position:
               
chr13:52227886-52228190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
49-407
               

               
Cow position:
               
chr13:15257164-15257518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
84, 144
               

               
Conread position:
               
49-456
               

               
Cow position:
               
chr13:2192922-2192519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
71, 100
               

               
Conread position:
               
50-426
               

               
Cow position:
               
chr13:15162452-15162797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
52-407
               

               
Cow position:
               
chr13:48598115-48597760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
75, 205
               

               
Conread position:
               
53-404
               

               
Cow position:
               
chr13:5082851-5082505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
54-297
               

               
Cow position:
               
chr13:16833869-16834113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 45
               

               
Conread position:
               
54-405
               

               
Cow position:
               
chr13:152160-151818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 62
               

               
Conread position:
               
54-419
               

               
Cow position:
               
chr13:40943457-40943080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 104
               

               
Conread position:
               
57-406
               

               
Cow position:
               
chr13:46112173-46111821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
63, 202
               

               
Conread position:
               
57-412
               

               
Cow position:
               
chr13:19022484-19022116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 54
               

               
Conread position:
               
58-378
               

               
Cow position:
               
chr13:22085546-22085865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
59-396
               

               
Cow position:
               
chr13:9593711-9593370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 305
               

               
Conread position:
               
59-432
               

               
Cow position:
               
chr13:19223853-19223484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
61, 178
               

               
Conread position:
               
63-379
               

               
Cow position:
               
chr13:15528828-15529157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 185
               

               
Conread position:
               
63-405
               

               
Cow position:
               
chr13:24230413-24230062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 180
               

               
Conread position:
               
63-405
               

               
Cow position:
               
chr13:37775027-37775351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
63-447
               

               
Cow position:
               
chr13:52749288-52749672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
64-401
               

               
Cow position:
               
chr13:26369725-26369379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
56, 188
               

               
Conread position:
               
64-461
               

               
Cow position:
               
chr13:23512558-23512156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
87, 63
               

               
Conread position:
               
71-397
               

               
Cow position:
               
chr13:15110515-15110177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
51, 14
               

               
Conread position:
               
71-410
               

               
Cow position:
               
chr13:48165237-48165581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
46, 120
               

               
Conread position:
               
71-461
               

               
Cow position:
               
chr13:34761863-34761477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 90
               

               
Conread position:
               
76-385
               

               
Cow position:
               
chr13:55583386-55583071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
44, 181
               

               
Conread position:
               
77-461
               

               
Cow position:
               
chr13:8652252-8652638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
43, 168
               

               
Conread position:
               
78-461
               

               
Cow position:
               
chr13:6540128-6540524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 24
               

               
Conread position:
               
79-405
               

               
Cow position:
               
chr13:14771645-14771307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
43, 182
               

               
Conread position:
               
79-406
               

               
Cow position:
               
chr13:47186408-47186085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
47, 156
               

               
Conread position:
               
79-407
               

               
Cow position:
               
chr13:15195025-15195350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 173
               

               
Conread position:
               
80-297
               

               
Cow position:
               
chr13:62474616-62474837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
40, 103
               

               
Conread position:
               
80-403
               

               
Cow position:
               
chr13:11644116-11643796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
80-404
               

               
Cow position:
               
chr13:15991039-15991375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
40, 180
               

               
Conread position:
               
81-407
               

               
Cow position:
               
chr13:52055414-52055743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
52, 37
               

               
Conread position:
               
82-451
               

               
Cow position:
               
chr13:5758164-5758545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 164
               

               
Conread position:
               
85-293
               

               
Cow position:
               
chr13:7790191-7789973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 7
               

               
Conread position:
               
93-407
               

               
Cow position:
               
chr13:53574139-53573824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
34, 60
               

               
Conread position:
               
93-420
               

               
Cow position:
               
chr13:4420517-4420170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
27, 171
               

               
Conread position:
               
93-451
               

               
Cow position:
               
chr13:19188469-19188101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 145
               

               
Conread position:
               
94-422
               

               
Cow position:
               
chr13:18697006-18696675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
96-397
               

               
Cow position:
               
chr13:547644-547356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 31
               

               
Conread position:
               
98-240
               

               
Cow position:
               
chr13:22030253-22030105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
102-414
               

               
Cow position:
               
chr13:9265672-9265982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
18, 11
               

               
Conread position:
               
102-461
               

               
Cow position:
               
chr13:20473526-20473898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 65
               

               
Conread position:
               
103-349
               

               
Cow position:
               
chr13:17338590-17338339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
61, 21
               

               
Conread position:
               
111-405
               

               
Cow position:
               
chr13:49520676-49520968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 127
               

               
Conread position:
               
111-451
               

               
Cow position:
               
chr13:46430155-46430489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
111-458
               

               
Cow position:
               
chr13:22075817-22075468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 31
               

               
Conread position:
               
116-294
               

               
Cow position:
               
chr13:28652940-28652766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
11, 67
               

               
Conread position:
               
116-329
               

               
Cow position:
               
chr13:36346112-36345903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
12, 128
               

               
Conread position:
               
116-349
               

               
Cow position:
               
chr13:1363833-1363604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 11
               

               
Conread position:
               
116-350
               

               
Cow position:
               
chr13:13339001-13338765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 116
               

               
Conread position:
               
116-389
               

               
Cow position:
               
chr13:8555604-8555335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
11, 133
               

               
Conread position:
               
116-400
               

               
Cow position:
               
chr13:19581946-19582226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
11, 103
               

               
Conread position:
               
116-403
               

               
Cow position:
               
chr13:20360411-20360134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
116-404
               

               
Cow position:
               
chr13:11381581-11381870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 89
               

               
Conread position:
               
116-405
               

               
Cow position:
               
chr13:2404880-2404609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 109
               

               
Conread position:
               
116-405
               

               
Cow position:
               
chr13:4158804-4158515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
9, 47
               

               
Conread position:
               
116-405
               

               
Cow position:
               
chr13:18058104-18058394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 258
               

               
Conread position:
               
116-405
               

               
Cow position:
               
chr13:21283569-21283851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 89
               

               
Conread position:
               
116-407
               

               
Cow position:
               
chr13:26698356-26698646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 147
               

               
Conread position:
               
116-407
               

               
Cow position:
               
chr13:54583018-54582725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 216
               

               
Conread position:
               
116-412
               

               
Cow position:
               
chr13:49022733-49023019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
116-412
               

               
Cow position:
               
chr13:49824164-49823875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 79
               

               
Conread position:
               
116-447
               

               
Cow position:
               
chr13:37946808-37947143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
25, 32
               

               
Conread position:
               
116-448
               

               
Cow position:
               
chr13:39368096-39367770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
11, 77
               

               
Conread position:
               
116-451
               

               
Cow position:
               
chr13:29831292-29831640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
11, 120
               

               
Conread position:
               
116-453
               

               
Cow position:
               
chr13:26743268-26742939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 125
               

               
Conread position:
               
116-458
               

               
Cow position:
               
chr13:8374631-8374981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 129
               

               
Conread position:
               
116-460
               

               
Cow position:
               
chr13:54388876-54389224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 130
               

               
Conread position:
               
118-331
               

               
Cow position:
               
chr13:12618976-12619187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
120-405
               

               
Cow position:
               
chr13:51115891-51116170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 26
               

               
Conread position:
               
122-426
               

               
Cow position:
               
chr13:17437735-17438022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
123-393
               

               
Cow position:
               
chr13:15144239-15144499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
25, 19
               

               
Conread position:
               
125-354
               

               
Cow position:
               
chr13:25381093-25380868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
27, 103
               

               
Conread position:
               
126-321
               

               
Cow position:
               
chr13:6455498-6455313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
167, 12
               

               
Conread position:
               
126-350
               

               
Cow position:
               
chr13:52929839-52929620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
38, 71
               

               
Conread position:
               
126-385
               

               
Cow position:
               
chr13:17966079-17966335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 108
               

               
Conread position:
               
126-387
               

               
Cow position:
               
chr13:18999672-18999407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
126-390
               

               
Cow position:
               
chr13:32826324-32826607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
7, 113
               

               
Conread position:
               
126-405
               

               
Cow position:
               
chr13:6389510-6389247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
82, 119
               

               
Conread position:
               
126-405
               

               
Cow position:
               
chr13:18929661-18929384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
38, 95
               

               
Conread position:
               
126-405
               

               
Cow position:
               
chr13:37640716-37640445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
126-406
               

               
Cow position:
               
chr13:6663621-6663900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
122, 30
               

               
Conread position:
               
126-447
               

               
Cow position:
               
chr13:11321486-11321809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
153, 106
               

               
Conread position:
               
126-457
               

               
Cow position:
               
chr13:2803598-2803267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
26, 5
               

               
Conread position:
               
126-457
               

               
Cow position:
               
chr13:15903146-15902839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
127-323
               

               
Cow position:
               
chr13:20128794-20128602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 104
               

               
Conread position:
               
127-339
               

               
Cow position:
               
chr13:13954259-13954473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 127
               

               
Conread position:
               
127-349
               

               
Cow position:
               
chr13:21269451-21269672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
127-387
               

               
Cow position:
               
chr13:6441971-6442233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 182
               

               
Conread position:
               
127-400
               

               
Cow position:
               
chr13:11591875-11591610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
25, 72
               

               
Conread position:
               
127-407
               

               
Cow position:
               
chr13:17568970-17569249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 135
               

               
Conread position:
               
127-453
               

               
Cow position:
               
chr13:25579058-25579380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
128-395
               

               
Cow position:
               
chr13:62518204-62518462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
257, 29
               

               
Conread position:
               
128-407
               

               
Cow position:
               
chr13:5671464-5671735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
259, 25
               

               
Conread position:
               
128-407
               

               
Cow position:
               
chr13:20217260-20217547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
33, 134
               

               
Conread position:
               
128-426
               

               
Cow position:
               
chr13:28552724-28552425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
36, 235
               

               
Conread position:
               
129-407
               

               
Cow position:
               
chr13:14576334-14576066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
9, 75
               

               
Conread position:
               
129-412
               

               
Cow position:
               
chr13:18995256-18994974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
9, 173
               

               
Conread position:
               
129-461
               

               
Cow position:
               
chr13:47188572-47188238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 103
               

               
Conread position:
               
130-328
               

               
Cow position:
               
chr13:10098865-10099056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
131-456
               

               
Cow position:
               
chr13:626685-626372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
41, 58
               

               
Conread position:
               
132-407
               

               
Cow position:
               
chr13:20288454-20288189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
257, 102
               

               
Conread position:
               
133-350
               

               
Cow position:
               
chr13:50713325-50713119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
29, 63
               

               
Conread position:
               
133-404
               

               
Cow position:
               
chr13:1569046-1568786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
20, 14
               

               
Conread position:
               
133-407
               

               
Cow position:
               
chr13:5910773-5911042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 99
               

               
Conread position:
               
133-412
               

               
Cow position:
               
chr13:60375365-60375641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
249, 105
               

               
Conread position:
               
135-371
               

               
Cow position:
               
chr13:34555711-34555940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
18, 12
               

               
Conread position:
               
137-461
               

               
Cow position:
               
chr13:15194613-15194944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 100
               

               
Conread position:
               
138-405
               

               
Cow position:
               
chr13:21135782-21136054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 94
               

               
Conread position:
               
139-407
               

               
Cow position:
               
chr13:20137938-20137668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
163, 18
               

               
Conread position:
               
147-393
               

               
Cow position:
               
chr13:6861292-6861047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
147-458
               

               
Cow position:
               
chr13:19240546-19240219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
6, 70
               

               
Conread position:
               
148-363
               

               
Cow position:
               
chr13:60389385-60389592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
148-397
               

               
Cow position:
               
chr13:47022467-47022227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
148-404
               

               
Cow position:
               
chr13:13297784-13297527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
148-404
               

               
Cow position:
               
chr13:44003822-44003556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
148-404
               

               
Cow position:
               
chr13:54128485-54128741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 88
               

               
Conread position:
               
148-405
               

               
Cow position:
               
chr13:8667721-8667474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
129, 60
               

               
Conread position:
               
148-407
               

               
Cow position:
               
chr13:620153-620397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
198, 56
               

               
Conread position:
               
148-407
               

               
Cow position:
               
chr13:17498325-17498069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
45, 77
               

               
Conread position:
               
148-421
               

               
Cow position:
               
chr13:49476191-49475915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
143, 12
               

               
Conread position:
               
149-394
               

               
Cow position:
               
chr13:8402163-8401921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
34, 10
               

               
Conread position:
               
150-405
               

               
Cow position:
               
chr13:46329498-46329751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
151-400
               

               
Cow position:
               
chr13:3989306-3989062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
89, 8
               

               
Conread position:
               
151-458
               

               
Cow position:
               
chr13:49457778-49457482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
240, 67
               

               
Conread position:
               
152-396
               

               
Cow position:
               
chr13:8355301-8355067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
237, 35
               

               
Conread position:
               
152-407
               

               
Cow position:
               
chr13:12974906-12974667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
152-413
               

               
Cow position:
               
chr13:19320639-19320381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
140, 109
               

               
Conread position:
               
152-461
               

               
Cow position:
               
chr13:7265021-7265329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
113, 58
               

               
Conread position:
               
153-459
               

               
Cow position:
               
chr13:56678115-56677819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
154-381
               

               
Cow position:
               
chr13:11397356-11397570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
10, 54
               

               
Conread position:
               
154-385
               

               
Cow position:
               
chr13:55728002-55727776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
155-397
               

               
Cow position:
               
chr13:17110320-17110088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
231, 30
               

               
Conread position:
               
157-405
               

               
Cow position:
               
chr13:18197504-18197755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
39, 84
               

               
Conread position:
               
157-405
               

               
Cow position:
               
chr13:51901691-51901437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
158-406
               

               
Cow position:
               
chr13:20871487-20871241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
132, 185
               

               
Conread position:
               
160-403
               

               
Cow position:
               
chr13:50568321-50568549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
161-405
               

               
Cow position:
               
chr13:20534976-20534750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
228, 41
               

               
Conread position:
               
161-405
               

               
Cow position:
               
chr13:23526204-23525965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
187, 43
               

               
Conread position:
               
163-349
               

               
Cow position:
               
chr13:50750961-50751146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
114, 81
               

               
Conread position:
               
163-393
               

               
Cow position:
               
chr13:43829332-43829110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
163-397
               

               
Cow position:
               
chr13:16038200-16038424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
220, 69
               

               
Conread position:
               
163-405
               

               
Cow position:
               
chr13:16714169-16714411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
56, 121
               

               
Conread position:
               
163-408
               

               
Cow position:
               
chr13:56034766-56035007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
165-407
               

               
Cow position:
               
chr13:52477555-52477794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
80, 67
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr13:15964408-15964149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
65, 235
               

               
Conread position:
               
168-339
               

               
Cow position:
               
chr13:10040447-10040619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 89
               

               
Conread position:
               
168-372
               

               
Cow position:
               
chr13:48862008-48862208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
168-407
               

               
Cow position:
               
chr13:17822866-17823099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 11
               

               
Conread position:
               
174-407
               

               
Cow position:
               
chr13:13196323-13196090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
72, 88
               

               
Conread position:
               
175-405
               

               
Cow position:
               
chr13:19279177-19278947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 62
               

               
Conread position:
               
176-451
               

               
Cow position:
               
chr13:7149308-7149024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 39
               

               
Conread position:
               
178-456
               

               
Cow position:
               
chr13:17089446-17089731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
214, 25
               

               
Conread position:
               
179-396
               

               
Cow position:
               
chr13:20868679-20868888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
182-399
               

               
Cow position:
               
chr13:827316-827103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
213, 62
               

               
Conread position:
               
182-405
               

               
Cow position:
               
chr13:9981767-9981986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
182-407
               

               
Cow position:
               
chr13:21170604-21170379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
185-397
               

               
Cow position:
               
chr13:5006063-5005863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
188-374
               

               
Cow position:
               
chr13:29123373-29123189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
119, 48
               

               
Conread position:
               
188-396
               

               
Cow position:
               
chr13:8478470-8478265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
191, 17
               

               
Conread position:
               
188-402
               

               
Cow position:
               
chr13:17563804-17563596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
200, 43
               

               
Conread position:
               
190-405
               

               
Cow position:
               
chr13:62008178-62007960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
191-403
               

               
Cow position:
               
chr13:17838014-17837806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
192-386
               

               
Cow position:
               
chr13:13211950-13211757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
192-405
               

               
Cow position:
               
chr13:15239456-15239656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
194-400
               

               
Cow position:
               
chr13:24110548-24110338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
197-404
               

               
Cow position:
               
chr13:35557046-35557255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
43, 35
               

               
Conread position:
               
197-449
               

               
Cow position:
               
chr13:18181714-18181962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
202-416
               

               
Cow position:
               
chr13:19007986-19007779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
203-460
               

               
Cow position:
               
chr13:25504586-25504323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
175, 27
               

               
Conread position:
               
204-394
               

               
Cow position:
               
chr13:17350405-17350219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
185, 109
               

               
Conread position:
               
204-457
               

               
Cow position:
               
chr13:16020904-16020640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
205-458
               

               
Cow position:
               
chr13:84630-84371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
46, 8
               

               
Conread position:
               
207-389
               

               
Cow position:
               
chr13:51856837-51857015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
208-394
               

               
Cow position:
               
chr13:21171524-21171708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
97, 29
               

               
Conread position:
               
208-407
               

               
Cow position:
               
chr13:17611502-17611700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
169, 29
               

               
Conread position:
               
208-452
               

               
Cow position:
               
chr13:45108364-45108615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
97, 29
               

               
Conread position:
               
212-397
               

               
Cow position:
               
chr13:29663074-29662891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
213-407
               

               
Cow position:
               
chr13:55494477-55494671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
19, 173
               

               
Conread position:
               
213-412
               

               
Cow position:
               
chr13:28440492-28440690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
175, 100
               

               
Conread position:
               
214-405
               

               
Cow position:
               
chr13:8350373-8350175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
220-406
               

               
Cow position:
               
chr13:16160458-16160272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
227-458
               

               
Cow position:
               
chr13:57985906-57986154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
233-395
               

               
Cow position:
               
chr13:49255209-49255376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
234-393
               

               
Cow position:
               
chr13:6183393-6183555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
237-419
               

               
Cow position:
               
chr13:43525213-43525397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
154, 131
               

               
Conread position:
               
237-451
               

               
Cow position:
               
chr13:8233020-8232805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
151, 62
               

               
Conread position:
               
238-404
               

               
Cow position:
               
chr13:15083680-15083519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
151, 60
               

               
Conread position:
               
238-450
               

               
Cow position:
               
chr13:21295095-21294884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
198, 25
               

               
Conread position:
               
239-387
               

               
Cow position:
               
chr13:31529899-31529749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
239-403
               

               
Cow position:
               
chr13:21980955-21981117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
239-403
               

               
Cow position:
               
chr13:40154709-40154874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
239-407
               

               
Cow position:
               
chr13:38035855-38035690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
16, 12
               

               
Conread position:
               
240-407
               

               
Cow position:
               
chr13:45439541-45439383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
241-461
               

               
Cow position:
               
chr13:48439529-48439745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
6, 14
               

               
Conread position:
               
242-415
               

               
Cow position:
               
chr13:51813918-51814088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
7, 57
               

               
Conread position:
               
243-405
               

               
Cow position:
               
chr13:3209305-3209469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
115, 18
               

               
Conread position:
               
243-407
               

               
Cow position:
               
chr13:15997050-15996885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
128, 115
               

               
Conread position:
               
243-457
               

               
Cow position:
               
chr13:9161938-9161714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
108, 10
               

               
Conread position:
               
243-458
               

               
Cow position:
               
chr13:7046886-7046660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 25
               

               
Conread position:
               
243-459
               

               
Cow position:
               
chr13:15069972-15069751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
143, 6
               

               
Conread position:
               
244-375
               

               
Cow position:
               
chr13:47634521-47634391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
244-405
               

               
Cow position:
               
chr13:42640397-42640239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
145, 35
               

               
Conread position:
               
244-405
               

               
Cow position:
               
chr13:43893308-43893471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
105, 10
               

               
Conread position:
               
244-407
               

               
Cow position:
               
chr13:55765163-55765325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
86, 116
               

               
Conread position:
               
245-454
               

               
Cow position:
               
chr13:7149498-7149715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
144, 35
               

               
Conread position:
               
247-405
               

               
Cow position:
               
chr13:13775230-13775390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
254-375
               

               
Cow position:
               
chr13:60393789-60393668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
254-397
               

               
Cow position:
               
chr13:16908222-16908078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
254-405
               

               
Cow position:
               
chr13:7104659-7104508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
254-405
               

               
Cow position:
               
chr13:19750720-19750568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
254-406
               

               
Cow position:
               
chr13:6486246-6486390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
254-407
               

               
Cow position:
               
chr13:49356044-49356198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
254-455
               

               
Cow position:
               
chr13:15143838-15144048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
140, 45
               

               
Conread position:
               
254-459
               

               
Cow position:
               
chr13:33974738-33974525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
132, 92
               

               
Conread position:
               
254-461
               

               
Cow position:
               
chr13:20520066-20519848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
255-400
               

               
Cow position:
               
chr13:17813475-17813331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
111, 97
               

               
Conread position:
               
255-405
               

               
Cow position:
               
chr13:18340537-18340386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
255-406
               

               
Cow position:
               
chr13:10522937-10522791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
255-426
               

               
Cow position:
               
chr13:8699733-8699904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
134, 152
               

               
Conread position:
               
256-405
               

               
Cow position:
               
chr13:6926520-6926371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
256-445
               

               
Cow position:
               
chr13:52536568-52536364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
257-405
               

               
Cow position:
               
chr13:37621358-37621504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
132, 58
               

               
Conread position:
               
260-388
               

               
Cow position:
               
chr13:53850824-53850695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
260-407
               

               
Cow position:
               
chr13:38702877-38703028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 98
               

               
Conread position:
               
261-403
               

               
Cow position:
               
chr13:37614192-37614339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 129
               

               
Conread position:
               
261-407
               

               
Cow position:
               
chr13:8450328-8450184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
261-407
               

               
Cow position:
               
chr13:14645049-14644904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
50, 30
               

               
Conread position:
               
261-407
               

               
Cow position:
               
chr13:15061483-15061642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
261-436
               

               
Cow position:
               
chr13:18092877-18093049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
262-391
               

               
Cow position:
               
chr13:42849136-42849265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
266-397
               

               
Cow position:
               
chr13:38012325-38012194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
266-459
               

               
Cow position:
               
chr13:28439403-28439195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
5, 144
               

               
Conread position:
               
270-402
               

               
Cow position:
               
chr13:6962441-6962307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
119, 45
               

               
Conread position:
               
272-404
               

               
Cow position:
               
chr13:1075052-1075185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
272-460
               

               
Cow position:
               
chr13:21277480-21277679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
273-400
               

               
Cow position:
               
chr13:40634851-40634722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
273-406
               

               
Cow position:
               
chr13:33854698-33854832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
273-459
               

               
Cow position:
               
chr13:15060626-15060432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
275-451
               

               
Cow position:
               
chr13:21188352-21188169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
276-405
               

               
Cow position:
               
chr13:11565820-11565692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
282-459
               

               
Cow position:
               
chr13:16790186-16790004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
285-455
               

               
Cow position:
               
chr13:8392923-8393099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
287-407
               

               
Cow position:
               
chr13:37554902-37555020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
290-404
               

               
Cow position:
               
chr13:54682071-54681959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
295-455
               

               
Cow position:
               
chr13:8240627-8240461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 118
               

               
Conread position:
               
295-461
               

               
Cow position:
               
chr13:52891197-52891027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
298-396
               

               
Cow position:
               
chr13:37979614-37979713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
302-406
               

               
Cow position:
               
chr13:23399723-23399618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
303-387
               

               
Cow position:
               
chr13:17619848-17619764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
85
               

               
Alignm identity:
               
74
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
304-434
               

               
Cow position:
               
chr13:28081677-28081545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
310-461
               

               
Cow position:
               
chr13:34299910-34300071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               
Show alignments to all cow chromosomes.