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Cow genome map

           
Conread name:
           
Mixn-0029m24
        

               
Conread position:
               
2-287
               

               
Cow position:
               
chr16:4103429-4103148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
117, 24
               

               
Conread position:
               
2-459
               

               
Cow position:
               
chr16:16545796-16546258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
114, 162
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr16:25484094-25484307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
100, 37
               

               
Conread position:
               
3-286
               

               
Cow position:
               
chr16:53613025-53613323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
141, 44
               

               
Conread position:
               
3-307
               

               
Cow position:
               
chr16:46434390-46434082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
117, 45
               

               
Conread position:
               
3-347
               

               
Cow position:
               
chr16:37116799-37117148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
8, 46
               

               
Conread position:
               
3-375
               

               
Cow position:
               
chr16:52889684-52889310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 45
               

               
Conread position:
               
3-381
               

               
Cow position:
               
chr16:4979542-4979910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
127, 49
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr16:41752847-41752460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 45
               

               
Conread position:
               
3-404
               

               
Cow position:
               
chr16:8367099-8366697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
120, 154
               

               
Conread position:
               
3-405
               

               
Cow position:
               
chr16:11422033-11422433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
30, 224
               

               
Conread position:
               
3-405
               

               
Cow position:
               
chr16:20025168-20025573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 47
               

               
Conread position:
               
3-405
               

               
Cow position:
               
chr16:22842327-22841926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 45
               

               
Conread position:
               
3-406
               

               
Cow position:
               
chr16:18205697-18206090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 45
               

               
Conread position:
               
3-406
               

               
Cow position:
               
chr16:45813968-45813565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 22
               

               
Conread position:
               
3-407
               

               
Cow position:
               
chr16:14242101-14242504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 182
               

               
Conread position:
               
3-407
               

               
Cow position:
               
chr16:23681098-23681497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 45
               

               
Conread position:
               
3-407
               

               
Cow position:
               
chr16:44210824-44210423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
3-407
               

               
Cow position:
               
chr16:48145673-48145270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 48
               

               
Conread position:
               
3-448
               

               
Cow position:
               
chr16:47518577-47519029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 17
               

               
Conread position:
               
3-455
               

               
Cow position:
               
chr16:18693404-18692963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
108, 37
               

               
Conread position:
               
3-458
               

               
Cow position:
               
chr16:42734267-42733814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 46
               

               
Conread position:
               
3-459
               

               
Cow position:
               
chr16:48385675-48385209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 46
               

               
Conread position:
               
3-461
               

               
Cow position:
               
chr16:23025068-23025530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
4-134
               

               
Cow position:
               
chr16:33406030-33405899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
116, 38
               

               
Conread position:
               
4-190
               

               
Cow position:
               
chr16:18685514-18685331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
88, 44
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr16:22868446-22868153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
116, 23
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr16:22919228-22919586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
385, 43
               

               
Conread position:
               
4-405
               

               
Cow position:
               
chr16:7665357-7665768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
4-405
               

               
Cow position:
               
chr16:45785469-45785870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 33
               

               
Conread position:
               
4-455
               

               
Cow position:
               
chr16:18426912-18427365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
116, 48
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chr16:44744404-44744057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
107, 43
               

               
Conread position:
               
5-366
               

               
Cow position:
               
chr16:32327381-32327751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
5-400
               

               
Cow position:
               
chr16:7075647-7076038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 42
               

               
Conread position:
               
5-400
               

               
Cow position:
               
chr16:16548343-16548737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 44
               

               
Conread position:
               
6-375
               

               
Cow position:
               
chr16:29095683-29096023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
6-378
               

               
Cow position:
               
chr16:5636318-5636689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 111
               

               
Conread position:
               
6-405
               

               
Cow position:
               
chr16:11790742-11791141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 42
               

               
Conread position:
               
6-405
               

               
Cow position:
               
chr16:53086595-53086207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 43
               

               
Conread position:
               
6-407
               

               
Cow position:
               
chr16:13307134-13306735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 42
               

               
Conread position:
               
6-407
               

               
Cow position:
               
chr16:48006761-48006358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 16
               

               
Conread position:
               
7-242
               

               
Cow position:
               
chr16:52218819-52219052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
171, 41
               

               
Conread position:
               
7-350
               

               
Cow position:
               
chr16:23483020-23483359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
113, 10
               

               
Conread position:
               
8-347
               

               
Cow position:
               
chr16:42092645-42092315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
313, 40
               

               
Conread position:
               
8-389
               

               
Cow position:
               
chr16:571184-570803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 14
               

               
Conread position:
               
8-392
               

               
Cow position:
               
chr16:23871919-23871531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
112, 39
               

               
Conread position:
               
8-396
               

               
Cow position:
               
chr16:46552550-46552917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
8-399
               

               
Cow position:
               
chr16:16402596-16402198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
112, 40
               

               
Conread position:
               
8-403
               

               
Cow position:
               
chr16:9497540-9497138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
114, 8
               

               
Conread position:
               
8-405
               

               
Cow position:
               
chr16:14106377-14106772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 99
               

               
Conread position:
               
8-407
               

               
Cow position:
               
chr16:23730203-23729782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
114, 9
               

               
Conread position:
               
9-263
               

               
Cow position:
               
chr16:22157868-22157609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
120, 39
               

               
Conread position:
               
9-300
               

               
Cow position:
               
chr16:55308797-55308514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
108, 40
               

               
Conread position:
               
9-349
               

               
Cow position:
               
chr16:37380001-37380346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
20, 42
               

               
Conread position:
               
9-392
               

               
Cow position:
               
chr16:51869370-51869759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
92, 45
               

               
Conread position:
               
9-400
               

               
Cow position:
               
chr16:5740987-5741376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
293, 40
               

               
Conread position:
               
9-403
               

               
Cow position:
               
chr16:21450580-21450976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 39
               

               
Conread position:
               
9-405
               

               
Cow position:
               
chr16:45139402-45139798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 31
               

               
Conread position:
               
9-421
               

               
Cow position:
               
chr16:35757948-35758347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
111, 8
               

               
Conread position:
               
9-423
               

               
Cow position:
               
chr16:4499173-4499577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 43
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr16:45609718-45610136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
112, 248
               

               
Conread position:
               
9-455
               

               
Cow position:
               
chr16:52835145-52834697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 8
               

               
Conread position:
               
9-457
               

               
Cow position:
               
chr16:52789794-52790237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 27
               

               
Conread position:
               
9-461
               

               
Cow position:
               
chr16:44116-44555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
107, 40
               

               
Conread position:
               
10-180
               

               
Cow position:
               
chr16:14722009-14721837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
110, 37
               

               
Conread position:
               
10-194
               

               
Cow position:
               
chr16:33777552-33777738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-199
               

               
Cow position:
               
chr16:5293396-5293588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
112, 29
               

               
Conread position:
               
10-213
               

               
Cow position:
               
chr16:24403463-24403682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-218
               

               
Cow position:
               
chr16:29379987-29380204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
113, 38
               

               
Conread position:
               
10-219
               

               
Cow position:
               
chr16:56846165-56845945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
87, 95
               

               
Conread position:
               
10-223
               

               
Cow position:
               
chr16:590176-589964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
10-224
               

               
Cow position:
               
chr16:3918262-3918485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
10-229
               

               
Cow position:
               
chr16:30939467-30939693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
110, 43
               

               
Conread position:
               
10-230
               

               
Cow position:
               
chr16:49141825-49141605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-271
               

               
Cow position:
               
chr16:53225072-53224811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
152, 41
               

               
Conread position:
               
10-281
               

               
Cow position:
               
chr16:42253837-42253550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
10-287
               

               
Cow position:
               
chr16:4503013-4503296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
108, 38
               

               
Conread position:
               
10-287
               

               
Cow position:
               
chr16:8807357-8807079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-287
               

               
Cow position:
               
chr16:56150046-56150310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
118, 38
               

               
Conread position:
               
10-307
               

               
Cow position:
               
chr16:17665368-17665667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
10-312
               

               
Cow position:
               
chr16:24228617-24228313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
114, 38
               

               
Conread position:
               
10-312
               

               
Cow position:
               
chr16:43537471-43537779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
10-314
               

               
Cow position:
               
chr16:7083000-7082684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
120, 38
               

               
Conread position:
               
10-329
               

               
Cow position:
               
chr16:11619487-11619805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
10-347
               

               
Cow position:
               
chr16:18036699-18037023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
314, 38
               

               
Conread position:
               
10-347
               

               
Cow position:
               
chr16:42970198-42969852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-347
               

               
Cow position:
               
chr16:54298213-54298542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
137, 38
               

               
Conread position:
               
10-349
               

               
Cow position:
               
chr16:46752546-46752195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
30, 47
               

               
Conread position:
               
10-350
               

               
Cow position:
               
chr16:14360840-14361180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
113, 42
               

               
Conread position:
               
10-350
               

               
Cow position:
               
chr16:53892047-53891709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
110, 6
               

               
Conread position:
               
10-357
               

               
Cow position:
               
chr16:4972292-4971943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
10-368
               

               
Cow position:
               
chr16:31122517-31122155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
10-371
               

               
Cow position:
               
chr16:42217957-42217594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
112, 38
               

               
Conread position:
               
10-378
               

               
Cow position:
               
chr16:32132262-32132612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
91, 37
               

               
Conread position:
               
10-387
               

               
Cow position:
               
chr16:30027601-30027987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
216, 38
               

               
Conread position:
               
10-388
               

               
Cow position:
               
chr16:8438894-8438537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
39, 63
               

               
Conread position:
               
10-389
               

               
Cow position:
               
chr16:4399454-4399851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
105, 256
               

               
Conread position:
               
10-391
               

               
Cow position:
               
chr16:9973769-9973380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 38
               

               
Conread position:
               
10-393
               

               
Cow position:
               
chr16:52855283-52854902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
123, 27
               

               
Conread position:
               
10-397
               

               
Cow position:
               
chr16:48370213-48369823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
97, 27
               

               
Conread position:
               
10-400
               

               
Cow position:
               
chr16:49126450-49126059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 37
               

               
Conread position:
               
10-402
               

               
Cow position:
               
chr16:13698241-13698645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-403
               

               
Cow position:
               
chr16:23823286-23822902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
103, 38
               

               
Conread position:
               
10-403
               

               
Cow position:
               
chr16:39474405-39474022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 39
               

               
Conread position:
               
10-404
               

               
Cow position:
               
chr16:24825800-24826203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 252
               

               
Conread position:
               
10-404
               

               
Cow position:
               
chr16:48087137-48086740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
110, 41
               

               
Conread position:
               
10-405
               

               
Cow position:
               
chr16:19643628-19644021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 39
               

               
Conread position:
               
10-405
               

               
Cow position:
               
chr16:42079106-42078718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 39
               

               
Conread position:
               
10-405
               

               
Cow position:
               
chr16:55683026-55683428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
107, 39
               

               
Conread position:
               
10-407
               

               
Cow position:
               
chr16:819984-820387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 27
               

               
Conread position:
               
10-407
               

               
Cow position:
               
chr16:8840625-8841029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 41
               

               
Conread position:
               
10-407
               

               
Cow position:
               
chr16:19757053-19756644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
119, 44
               

               
Conread position:
               
10-407
               

               
Cow position:
               
chr16:24702585-24702989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
10-407
               

               
Cow position:
               
chr16:38709093-38708700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 38
               

               
Conread position:
               
10-408
               

               
Cow position:
               
chr16:51598869-51598477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 37
               

               
Conread position:
               
10-412
               

               
Cow position:
               
chr16:7702264-7702659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-426
               

               
Cow position:
               
chr16:15762430-15762003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
106, 39
               

               
Conread position:
               
10-426
               

               
Cow position:
               
chr16:23563869-23564285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 242
               

               
Conread position:
               
10-446
               

               
Cow position:
               
chr16:28191800-28192246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
10-447
               

               
Cow position:
               
chr16:29766077-29766516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
10-448
               

               
Cow position:
               
chr16:13989719-13990163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 41
               

               
Conread position:
               
10-456
               

               
Cow position:
               
chr16:34210680-34210223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-458
               

               
Cow position:
               
chr16:7542024-7542493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 39
               

               
Conread position:
               
11-283
               

               
Cow position:
               
chr16:11621069-11620802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
113, 38
               

               
Conread position:
               
11-290
               

               
Cow position:
               
chr16:39705106-39704822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
111, 37
               

               
Conread position:
               
11-328
               

               
Cow position:
               
chr16:30515846-30515534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
109, 37
               

               
Conread position:
               
11-347
               

               
Cow position:
               
chr16:35937070-35937411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
72, 37
               

               
Conread position:
               
11-349
               

               
Cow position:
               
chr16:33299125-33299470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
11-390
               

               
Cow position:
               
chr16:37669994-37669620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 40
               

               
Conread position:
               
11-402
               

               
Cow position:
               
chr16:5416018-5415633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 5
               

               
Conread position:
               
11-404
               

               
Cow position:
               
chr16:38663977-38663579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
109, 39
               

               
Conread position:
               
11-405
               

               
Cow position:
               
chr16:15960560-15960157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 36
               

               
Conread position:
               
11-405
               

               
Cow position:
               
chr16:25965240-25965630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
115, 28
               

               
Conread position:
               
11-405
               

               
Cow position:
               
chr16:48956537-48956930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
119, 37
               

               
Conread position:
               
11-407
               

               
Cow position:
               
chr16:29158866-29159253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
109, 36
               

               
Conread position:
               
11-407
               

               
Cow position:
               
chr16:33645748-33646151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 37
               

               
Conread position:
               
11-407
               

               
Cow position:
               
chr16:54578901-54579301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 37
               

               
Conread position:
               
11-441
               

               
Cow position:
               
chr16:7498803-7499216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
345, 36
               

               
Conread position:
               
12-229
               

               
Cow position:
               
chr16:33751933-33752155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
89, 36
               

               
Conread position:
               
12-283
               

               
Cow position:
               
chr16:16177551-16177828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
35, 156
               

               
Conread position:
               
12-304
               

               
Cow position:
               
chr16:51400011-51399720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
12-314
               

               
Cow position:
               
chr16:44676623-44676914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
12-330
               

               
Cow position:
               
chr16:23990750-23990423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
108, 17
               

               
Conread position:
               
12-339
               

               
Cow position:
               
chr16:31978453-31978120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
89, 36
               

               
Conread position:
               
12-340
               

               
Cow position:
               
chr16:34168330-34168653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
111, 36
               

               
Conread position:
               
12-382
               

               
Cow position:
               
chr16:5725211-5725577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
115, 13
               

               
Conread position:
               
12-387
               

               
Cow position:
               
chr16:18402431-18402800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
12-397
               

               
Cow position:
               
chr16:17745569-17745961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 142
               

               
Conread position:
               
12-400
               

               
Cow position:
               
chr16:42242383-42241990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 39
               

               
Conread position:
               
12-400
               

               
Cow position:
               
chr16:51578684-51578314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
108, 41
               

               
Conread position:
               
12-400
               

               
Cow position:
               
chr16:53509253-53508858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 28
               

               
Conread position:
               
12-404
               

               
Cow position:
               
chr16:49169647-49169249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 28
               

               
Conread position:
               
12-424
               

               
Cow position:
               
chr16:39394312-39394717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
115, 28
               

               
Conread position:
               
12-432
               

               
Cow position:
               
chr16:6379377-6378961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
33, 146
               

               
Conread position:
               
12-435
               

               
Cow position:
               
chr16:13969642-13969203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 17
               

               
Conread position:
               
12-451
               

               
Cow position:
               
chr16:53627688-53627253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 36
               

               
Conread position:
               
12-455
               

               
Cow position:
               
chr16:50417953-50417506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 166
               

               
Conread position:
               
12-459
               

               
Cow position:
               
chr16:23066403-23066843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
141, 103
               

               
Conread position:
               
12-460
               

               
Cow position:
               
chr16:9932891-9933340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 102
               

               
Conread position:
               
12-461
               

               
Cow position:
               
chr16:23033604-23034039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
219, 37
               

               
Conread position:
               
13-358
               

               
Cow position:
               
chr16:5477611-5477275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
107, 37
               

               
Conread position:
               
13-407
               

               
Cow position:
               
chr16:1549142-1548745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
9, 21
               

               
Conread position:
               
13-457
               

               
Cow position:
               
chr16:16265363-16264911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
105, 35
               

               
Conread position:
               
15-328
               

               
Cow position:
               
chr16:47245326-47245644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
107, 33
               

               
Conread position:
               
17-208
               

               
Cow position:
               
chr16:47017504-47017307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
17-283
               

               
Cow position:
               
chr16:26500901-26501168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
103, 31
               

               
Conread position:
               
17-304
               

               
Cow position:
               
chr16:27004940-27005234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
93, 32
               

               
Conread position:
               
17-340
               

               
Cow position:
               
chr16:24672619-24672291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
103, 30
               

               
Conread position:
               
17-350
               

               
Cow position:
               
chr16:30143472-30143123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
103, 30
               

               
Conread position:
               
17-387
               

               
Cow position:
               
chr16:39616484-39616836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
80, 30
               

               
Conread position:
               
17-397
               

               
Cow position:
               
chr16:54665071-54664674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
31, 148
               

               
Conread position:
               
17-402
               

               
Cow position:
               
chr16:16597302-16597686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 31
               

               
Conread position:
               
17-405
               

               
Cow position:
               
chr16:43275762-43276150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 31
               

               
Conread position:
               
17-407
               

               
Cow position:
               
chr16:33226792-33226402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 31
               

               
Conread position:
               
17-448
               

               
Cow position:
               
chr16:43506058-43505638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 31
               

               
Conread position:
               
17-458
               

               
Cow position:
               
chr16:27659986-27659558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
280, 31
               

               
Conread position:
               
18-193
               

               
Cow position:
               
chr16:15408131-15407957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 17
               

               
Conread position:
               
18-263
               

               
Cow position:
               
chr16:8620991-8621224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
208, 30
               

               
Conread position:
               
18-271
               

               
Cow position:
               
chr16:39385142-39385408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
103, 30
               

               
Conread position:
               
18-292
               

               
Cow position:
               
chr16:16424863-16424591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
112, 31
               

               
Conread position:
               
18-293
               

               
Cow position:
               
chr16:39417368-39417100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
68, 31
               

               
Conread position:
               
18-300
               

               
Cow position:
               
chr16:13791253-13791544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 192
               

               
Conread position:
               
18-300
               

               
Cow position:
               
chr16:24147896-24148188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
104, 29
               

               
Conread position:
               
18-301
               

               
Cow position:
               
chr16:4712642-4712927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
18-345
               

               
Cow position:
               
chr16:46521643-46521961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
108, 30
               

               
Conread position:
               
18-347
               

               
Cow position:
               
chr16:30290057-30290382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
86, 30
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr16:35343734-35343397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
18-361
               

               
Cow position:
               
chr16:39514338-39513988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 71
               

               
Conread position:
               
18-378
               

               
Cow position:
               
chr16:48398504-48398149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
18-386
               

               
Cow position:
               
chr16:3246451-3246092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 29
               

               
Conread position:
               
18-397
               

               
Cow position:
               
chr16:2223666-2223272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 30
               

               
Conread position:
               
18-397
               

               
Cow position:
               
chr16:11103085-11102698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
85, 236
               

               
Conread position:
               
18-397
               

               
Cow position:
               
chr16:18354210-18353833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 29
               

               
Conread position:
               
18-402
               

               
Cow position:
               
chr16:7456725-7456335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
83, 232
               

               
Conread position:
               
18-404
               

               
Cow position:
               
chr16:10040097-10039717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
18-404
               

               
Cow position:
               
chr16:47820312-47820697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
18-405
               

               
Cow position:
               
chr16:4059100-4059486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 30
               

               
Conread position:
               
18-405
               

               
Cow position:
               
chr16:13579102-13578730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
18-405
               

               
Cow position:
               
chr16:33054723-33054346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
371, 30
               

               
Conread position:
               
18-407
               

               
Cow position:
               
chr16:15370421-15370819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 22
               

               
Conread position:
               
18-407
               

               
Cow position:
               
chr16:27701504-27701127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
18-408
               

               
Cow position:
               
chr16:35187996-35188385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 29
               

               
Conread position:
               
18-412
               

               
Cow position:
               
chr16:51113135-51112741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
101, 29
               

               
Conread position:
               
18-457
               

               
Cow position:
               
chr16:56231564-56232018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 30
               

               
Conread position:
               
18-459
               

               
Cow position:
               
chr16:8026102-8025660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
18-460
               

               
Cow position:
               
chr16:33507804-33508249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
104, 30
               

               
Conread position:
               
18-460
               

               
Cow position:
               
chr16:53267470-53267913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 20
               

               
Conread position:
               
18-461
               

               
Cow position:
               
chr16:45731631-45731195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 33
               

               
Conread position:
               
18-461
               

               
Cow position:
               
chr16:50688267-50688717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
87, 40
               

               
Conread position:
               
19-287
               

               
Cow position:
               
chr16:30311367-30311092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
105, 30
               

               
Conread position:
               
19-388
               

               
Cow position:
               
chr16:4699227-4698873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
19-389
               

               
Cow position:
               
chr16:4902344-4902705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 29
               

               
Conread position:
               
19-397
               

               
Cow position:
               
chr16:30715234-30715628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
19-417
               

               
Cow position:
               
chr16:16096481-16096882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
19-447
               

               
Cow position:
               
chr16:42777705-42778141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
19-454
               

               
Cow position:
               
chr16:37452874-37452435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
20-460
               

               
Cow position:
               
chr16:51070186-51069724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
77, 91
               

               
Conread position:
               
21-461
               

               
Cow position:
               
chr16:11008088-11008537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 16
               

               
Conread position:
               
21-461
               

               
Cow position:
               
chr16:56445658-56445231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
97, 27
               

               
Conread position:
               
22-310
               

               
Cow position:
               
chr16:56912976-56912677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
97, 30
               

               
Conread position:
               
23-320
               

               
Cow position:
               
chr16:25287947-25287647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
12, 220
               

               
Conread position:
               
23-405
               

               
Cow position:
               
chr16:50282687-50282299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
8, 27
               

               
Conread position:
               
24-223
               

               
Cow position:
               
chr16:51043380-51043576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
93, 24
               

               
Conread position:
               
24-451
               

               
Cow position:
               
chr16:42339949-42340377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 96
               

               
Conread position:
               
25-349
               

               
Cow position:
               
chr16:9728952-9729271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
25-405
               

               
Cow position:
               
chr16:8522639-8522259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 23
               

               
Conread position:
               
25-405
               

               
Cow position:
               
chr16:38905478-38905102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
25-460
               

               
Cow position:
               
chr16:48492934-48493371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 27
               

               
Conread position:
               
26-213
               

               
Cow position:
               
chr16:902138-901940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
26-277
               

               
Cow position:
               
chr16:43804246-43804497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
97, 22
               

               
Conread position:
               
26-281
               

               
Cow position:
               
chr16:9790882-9790623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
46, 22
               

               
Conread position:
               
26-282
               

               
Cow position:
               
chr16:15188947-15189195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
98, 22
               

               
Conread position:
               
26-284
               

               
Cow position:
               
chr16:30209512-30209761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
101, 21
               

               
Conread position:
               
26-288
               

               
Cow position:
               
chr16:17867726-17867454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
26-288
               

               
Cow position:
               
chr16:44973245-44973509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
26-310
               

               
Cow position:
               
chr16:6692865-6692564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 86
               

               
Conread position:
               
26-316
               

               
Cow position:
               
chr16:11643107-11643393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
116, 21
               

               
Conread position:
               
26-323
               

               
Cow position:
               
chr16:4144815-4145113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
26-328
               

               
Cow position:
               
chr16:54287626-54287920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
103, 21
               

               
Conread position:
               
26-347
               

               
Cow position:
               
chr16:53553968-53553645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
26-349
               

               
Cow position:
               
chr16:46353825-46353520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
26-350
               

               
Cow position:
               
chr16:13752374-13752055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
26-354
               

               
Cow position:
               
chr16:8959314-8958975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
26-361
               

               
Cow position:
               
chr16:47728772-47729113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
100, 23
               

               
Conread position:
               
26-394
               

               
Cow position:
               
chr16:8933670-8933306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
26-396
               

               
Cow position:
               
chr16:238010-238391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 22
               

               
Conread position:
               
26-401
               

               
Cow position:
               
chr16:19408764-19408399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 208
               

               
Conread position:
               
26-402
               

               
Cow position:
               
chr16:13611696-13611325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 21
               

               
Conread position:
               
26-403
               

               
Cow position:
               
chr16:46655031-46655410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
67, 22
               

               
Conread position:
               
26-404
               

               
Cow position:
               
chr16:4857342-4856970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 166
               

               
Conread position:
               
26-404
               

               
Cow position:
               
chr16:35623501-35623119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 69
               

               
Conread position:
               
26-405
               

               
Cow position:
               
chr16:5363641-5364034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
26-405
               

               
Cow position:
               
chr16:22850078-22850456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
92, 23
               

               
Conread position:
               
26-405
               

               
Cow position:
               
chr16:33704547-33704937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 226
               

               
Conread position:
               
26-405
               

               
Cow position:
               
chr16:42633999-42633607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
26-405
               

               
Cow position:
               
chr16:48340943-48340562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 22
               

               
Conread position:
               
26-406
               

               
Cow position:
               
chr16:7136603-7136211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
102, 22
               

               
Conread position:
               
26-406
               

               
Cow position:
               
chr16:18678946-18679317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
26-406
               

               
Cow position:
               
chr16:32970319-32969947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
26-407
               

               
Cow position:
               
chr16:7504849-7505217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 21
               

               
Conread position:
               
26-407
               

               
Cow position:
               
chr16:13689412-13689799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
26-407
               

               
Cow position:
               
chr16:26649884-26649496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 21
               

               
Conread position:
               
26-407
               

               
Cow position:
               
chr16:48096014-48095633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
26-407
               

               
Cow position:
               
chr16:51500681-51501064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
26-409
               

               
Cow position:
               
chr16:4910782-4910387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 23
               

               
Conread position:
               
26-412
               

               
Cow position:
               
chr16:31558641-31559039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
26-414
               

               
Cow position:
               
chr16:7429127-7429518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
108, 22
               

               
Conread position:
               
26-417
               

               
Cow position:
               
chr16:49125771-49125385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
92, 21
               

               
Conread position:
               
26-419
               

               
Cow position:
               
chr16:40561975-40562374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 222
               

               
Conread position:
               
26-421
               

               
Cow position:
               
chr16:19003771-19003385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 33
               

               
Conread position:
               
26-424
               

               
Cow position:
               
chr16:5256752-5257150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 22
               

               
Conread position:
               
26-425
               

               
Cow position:
               
chr16:14758488-14758891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
58, 76
               

               
Conread position:
               
26-426
               

               
Cow position:
               
chr16:33482187-33482597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
26-426
               

               
Cow position:
               
chr16:47662462-47662879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
26-438
               

               
Cow position:
               
chr16:36930571-36930150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr16:19976714-19977132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 219
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr16:26373202-26372767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
26-453
               

               
Cow position:
               
chr16:8315425-8315011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
368, 23
               

               
Conread position:
               
26-456
               

               
Cow position:
               
chr16:39164995-39165438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
67, 21
               

               
Conread position:
               
26-458
               

               
Cow position:
               
chr16:18557517-18557076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
104, 233
               

               
Conread position:
               
26-459
               

               
Cow position:
               
chr16:50873425-50872981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
26-460
               

               
Cow position:
               
chr16:11775302-11774840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 127
               

               
Conread position:
               
26-460
               

               
Cow position:
               
chr16:39646309-39646727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
86, 21
               

               
Conread position:
               
27-196
               

               
Cow position:
               
chr16:43152955-43152781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
27-347
               

               
Cow position:
               
chr16:600695-601019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
27-347
               

               
Cow position:
               
chr16:5654259-5654573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
89, 20
               

               
Conread position:
               
27-351
               

               
Cow position:
               
chr16:26610384-26610717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 8
               

               
Conread position:
               
27-405
               

               
Cow position:
               
chr16:18141579-18141196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 20
               

               
Conread position:
               
27-405
               

               
Cow position:
               
chr16:22804831-22804467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
27-405
               

               
Cow position:
               
chr16:34998851-34998494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
124, 90
               

               
Conread position:
               
27-407
               

               
Cow position:
               
chr16:11615478-11615107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
27-442
               

               
Cow position:
               
chr16:56875903-56875496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
27-447
               

               
Cow position:
               
chr16:26134595-26134196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
203, 89
               

               
Conread position:
               
27-460
               

               
Cow position:
               
chr16:29655075-29655523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 40
               

               
Conread position:
               
27-461
               

               
Cow position:
               
chr16:43661203-43661637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
86, 22
               

               
Conread position:
               
28-286
               

               
Cow position:
               
chr16:47620131-47620392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
94, 21
               

               
Conread position:
               
28-343
               

               
Cow position:
               
chr16:8280038-8279722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
94, 20
               

               
Conread position:
               
28-402
               

               
Cow position:
               
chr16:29608269-29608639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 20
               

               
Conread position:
               
29-404
               

               
Cow position:
               
chr16:29557879-29557493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
29-434
               

               
Cow position:
               
chr16:3633867-3634280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 19
               

               
Conread position:
               
30-287
               

               
Cow position:
               
chr16:29066921-29067175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
88, 18
               

               
Conread position:
               
30-288
               

               
Cow position:
               
chr16:41037437-41037705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 18
               

               
Conread position:
               
30-378
               

               
Cow position:
               
chr16:45703223-45702867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
63, 18
               

               
Conread position:
               
30-386
               

               
Cow position:
               
chr16:23737937-23738294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 9
               

               
Conread position:
               
30-403
               

               
Cow position:
               
chr16:13195580-13195211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 18
               

               
Conread position:
               
30-408
               

               
Cow position:
               
chr16:14754569-14754191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 18
               

               
Conread position:
               
30-452
               

               
Cow position:
               
chr16:11806435-11806855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
30-454
               

               
Cow position:
               
chr16:25839364-25839814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 221
               

               
Conread position:
               
30-461
               

               
Cow position:
               
chr16:23472503-23472952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 229
               

               
Conread position:
               
31-407
               

               
Cow position:
               
chr16:20476290-20476669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
89, 17
               

               
Conread position:
               
31-457
               

               
Cow position:
               
chr16:54515481-54515906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
81, 143
               

               
Conread position:
               
33-340
               

               
Cow position:
               
chr16:4981613-4981310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
87, 14
               

               
Conread position:
               
34-287
               

               
Cow position:
               
chr16:47336487-47336749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
86, 14
               

               
Conread position:
               
35-460
               

               
Cow position:
               
chr16:40333567-40333126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 14
               

               
Conread position:
               
37-394
               

               
Cow position:
               
chr16:7152414-7152050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 219
               

               
Conread position:
               
39-349
               

               
Cow position:
               
chr16:594470-594148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
21, 221
               

               
Conread position:
               
39-404
               

               
Cow position:
               
chr16:10032387-10032768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
22, 76
               

               
Conread position:
               
39-407
               

               
Cow position:
               
chr16:8812326-8811962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
83, 37
               

               
Conread position:
               
40-456
               

               
Cow position:
               
chr16:19670570-19670151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
344, 89
               

               
Conread position:
               
40-457
               

               
Cow position:
               
chr16:27262183-27261772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
78, 67
               

               
Conread position:
               
41-282
               

               
Cow position:
               
chr16:14028852-14028620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
79, 22
               

               
Conread position:
               
41-311
               

               
Cow position:
               
chr16:1725310-1725035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
115, 48
               

               
Conread position:
               
41-332
               

               
Cow position:
               
chr16:11274672-11274962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
77, 127
               

               
Conread position:
               
41-341
               

               
Cow position:
               
chr16:13233179-13232881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
41-372
               

               
Cow position:
               
chr16:41608371-41608706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
47, 197
               

               
Conread position:
               
41-389
               

               
Cow position:
               
chr16:4626632-4626275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 180
               

               
Conread position:
               
41-407
               

               
Cow position:
               
chr16:52636619-52636249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
79, 151
               

               
Conread position:
               
42-280
               

               
Cow position:
               
chr16:23810686-23810918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 66
               

               
Conread position:
               
42-296
               

               
Cow position:
               
chr16:35168489-35168753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
80, 167
               

               
Conread position:
               
42-320
               

               
Cow position:
               
chr16:45534947-45535225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
78, 60
               

               
Conread position:
               
42-391
               

               
Cow position:
               
chr16:15824678-15824325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 181
               

               
Conread position:
               
42-392
               

               
Cow position:
               
chr16:51246727-51247054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
123, 43
               

               
Conread position:
               
42-395
               

               
Cow position:
               
chr16:30096366-30096013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
59, 66
               

               
Conread position:
               
42-403
               

               
Cow position:
               
chr16:8193213-8193583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
58, 15
               

               
Conread position:
               
42-406
               

               
Cow position:
               
chr16:49230004-49229635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 125
               

               
Conread position:
               
42-407
               

               
Cow position:
               
chr16:3614512-3614874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
80, 127
               

               
Conread position:
               
42-411
               

               
Cow position:
               
chr16:36203851-36203481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 149
               

               
Conread position:
               
43-226
               

               
Cow position:
               
chr16:33588433-33588624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
77, 176
               

               
Conread position:
               
43-308
               

               
Cow position:
               
chr16:4372731-4372458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 152
               

               
Conread position:
               
43-308
               

               
Cow position:
               
chr16:11568345-11568081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
43-340
               

               
Cow position:
               
chr16:53048316-53048619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
45, 69
               

               
Conread position:
               
43-387
               

               
Cow position:
               
chr16:32837781-32837435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
67, 139
               

               
Conread position:
               
43-395
               

               
Cow position:
               
chr16:30037229-30036869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 24
               

               
Conread position:
               
43-404
               

               
Cow position:
               
chr16:17142698-17143067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
43-407
               

               
Cow position:
               
chr16:25170155-25170529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 223
               

               
Conread position:
               
43-458
               

               
Cow position:
               
chr16:45047858-45047448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 8
               

               
Conread position:
               
43-461
               

               
Cow position:
               
chr16:41590544-41590980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
77, 138
               

               
Conread position:
               
43-461
               

               
Cow position:
               
chr16:51710363-51709939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
77, 167
               

               
Conread position:
               
44-349
               

               
Cow position:
               
chr16:39695711-39695407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
101, 86
               

               
Conread position:
               
44-405
               

               
Cow position:
               
chr16:5896185-5896550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
80, 246
               

               
Conread position:
               
44-406
               

               
Cow position:
               
chr16:14568719-14568356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 126
               

               
Conread position:
               
44-407
               

               
Cow position:
               
chr16:56082594-56082226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 64
               

               
Conread position:
               
45-332
               

               
Cow position:
               
chr16:21904930-21905221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
52, 7
               

               
Conread position:
               
45-403
               

               
Cow position:
               
chr16:26676923-26676555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 213
               

               
Conread position:
               
45-425
               

               
Cow position:
               
chr16:5726693-5727084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 284
               

               
Conread position:
               
45-438
               

               
Cow position:
               
chr16:37062628-37062236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
75, 109
               

               
Conread position:
               
45-457
               

               
Cow position:
               
chr16:10148048-10148475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 209
               

               
Conread position:
               
46-240
               

               
Cow position:
               
chr16:43851058-43850862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
46-306
               

               
Cow position:
               
chr16:13973514-13973253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
46-315
               

               
Cow position:
               
chr16:26342045-26342308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
69, 61
               

               
Conread position:
               
47-405
               

               
Cow position:
               
chr16:32302218-32301875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
66, 102
               

               
Conread position:
               
49-340
               

               
Cow position:
               
chr16:15504755-15504453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
71, 194
               

               
Conread position:
               
49-381
               

               
Cow position:
               
chr16:32781133-32781471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
73, 132
               

               
Conread position:
               
50-264
               

               
Cow position:
               
chr16:51531201-51530976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 200
               

               
Conread position:
               
50-308
               

               
Cow position:
               
chr16:27249181-27249439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
25, 159
               

               
Conread position:
               
50-405
               

               
Cow position:
               
chr16:50288929-50289283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 75
               

               
Conread position:
               
51-407
               

               
Cow position:
               
chr16:49336000-49336356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
69, 104
               

               
Conread position:
               
52-403
               

               
Cow position:
               
chr16:43801134-43800788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 9
               

               
Conread position:
               
54-283
               

               
Cow position:
               
chr16:31159802-31159562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
74, 188
               

               
Conread position:
               
54-396
               

               
Cow position:
               
chr16:22772744-22773102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
66, 150
               

               
Conread position:
               
54-405
               

               
Cow position:
               
chr16:43105737-43105384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 175
               

               
Conread position:
               
54-407
               

               
Cow position:
               
chr16:12361196-12360841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 199
               

               
Conread position:
               
54-416
               

               
Cow position:
               
chr16:20634102-20633735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 198
               

               
Conread position:
               
54-422
               

               
Cow position:
               
chr16:11105325-11105702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 194
               

               
Conread position:
               
54-432
               

               
Cow position:
               
chr16:43308793-43308406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
65, 208
               

               
Conread position:
               
54-442
               

               
Cow position:
               
chr16:18758068-18757670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
61, 143
               

               
Conread position:
               
56-275
               

               
Cow position:
               
chr16:47116448-47116669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
41, 49
               

               
Conread position:
               
56-396
               

               
Cow position:
               
chr16:28396317-28395957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 16
               

               
Conread position:
               
57-297
               

               
Cow position:
               
chr16:30705886-30706131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 6
               

               
Conread position:
               
57-387
               

               
Cow position:
               
chr16:48191222-48190899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
67, 168
               

               
Conread position:
               
59-327
               

               
Cow position:
               
chr16:53595741-53595471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 51
               

               
Conread position:
               
59-351
               

               
Cow position:
               
chr16:56787996-56787699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
67, 17
               

               
Conread position:
               
59-396
               

               
Cow position:
               
chr16:8323205-8322860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 199
               

               
Conread position:
               
59-403
               

               
Cow position:
               
chr16:42443935-42444286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
63, 8
               

               
Conread position:
               
59-406
               

               
Cow position:
               
chr16:47643200-47643550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
67, 92
               

               
Conread position:
               
60-412
               

               
Cow position:
               
chr16:52169848-52170193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
60, 87
               

               
Conread position:
               
60-458
               

               
Cow position:
               
chr16:54679449-54679856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
36, 170
               

               
Conread position:
               
61-288
               

               
Cow position:
               
chr16:28692927-28692708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
101, 28
               

               
Conread position:
               
61-407
               

               
Cow position:
               
chr16:45677069-45676735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
59, 183
               

               
Conread position:
               
62-436
               

               
Cow position:
               
chr16:31117836-31117451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 178
               

               
Conread position:
               
63-451
               

               
Cow position:
               
chr16:51696880-51697275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
63, 74
               

               
Conread position:
               
66-407
               

               
Cow position:
               
chr16:8069030-8068689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
46, 101
               

               
Conread position:
               
71-393
               

               
Cow position:
               
chr16:53830796-53830473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 41
               

               
Conread position:
               
71-439
               

               
Cow position:
               
chr16:14124949-14125309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
311, 67
               

               
Conread position:
               
71-450
               

               
Cow position:
               
chr16:12633686-12634065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
85, 162
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr16:17982346-17982020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
76-405
               

               
Cow position:
               
chr16:54341797-54342119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
170, 44
               

               
Conread position:
               
76-407
               

               
Cow position:
               
chr16:42752658-42752981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
44, 102
               

               
Conread position:
               
78-350
               

               
Cow position:
               
chr16:16552362-16552638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 30
               

               
Conread position:
               
78-405
               

               
Cow position:
               
chr16:17945328-17945656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 80
               

               
Conread position:
               
78-407
               

               
Cow position:
               
chr16:14685589-14685255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 154
               

               
Conread position:
               
79-397
               

               
Cow position:
               
chr16:17626731-17627054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
41, 157
               

               
Conread position:
               
79-405
               

               
Cow position:
               
chr16:8066080-8065757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
43, 135
               

               
Conread position:
               
79-448
               

               
Cow position:
               
chr16:12085980-12085612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
68, 54
               

               
Conread position:
               
79-459
               

               
Cow position:
               
chr16:52275329-52274927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 165
               

               
Conread position:
               
80-407
               

               
Cow position:
               
chr16:11957782-11957442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 74
               

               
Conread position:
               
82-348
               

               
Cow position:
               
chr16:50521287-50521552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 27
               

               
Conread position:
               
82-458
               

               
Cow position:
               
chr16:41530487-41530102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
46, 157
               

               
Conread position:
               
83-459
               

               
Cow position:
               
chr16:45554243-45554642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 162
               

               
Conread position:
               
84-378
               

               
Cow position:
               
chr16:38119631-38119345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
62, 95
               

               
Conread position:
               
85-277
               

               
Cow position:
               
chr16:28198105-28198289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
86-405
               

               
Cow position:
               
chr16:24855348-24855674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
36, 160
               

               
Conread position:
               
86-452
               

               
Cow position:
               
chr16:6344631-6344257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
45, 153
               

               
Conread position:
               
86-457
               

               
Cow position:
               
chr16:591996-591624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
68, 16
               

               
Conread position:
               
88-407
               

               
Cow position:
               
chr16:44584620-44584305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
100, 89
               

               
Conread position:
               
89-407
               

               
Cow position:
               
chr16:46433512-46433189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 65
               

               
Conread position:
               
89-460
               

               
Cow position:
               
chr16:41689518-41689881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 31
               

               
Conread position:
               
93-331
               

               
Cow position:
               
chr16:39237761-39238004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 85
               

               
Conread position:
               
93-406
               

               
Cow position:
               
chr16:3047526-3047208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
31, 136
               

               
Conread position:
               
93-406
               

               
Cow position:
               
chr16:4275926-4275608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 134
               

               
Conread position:
               
96-397
               

               
Cow position:
               
chr16:31348941-31348641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 31
               

               
Conread position:
               
100-405
               

               
Cow position:
               
chr16:34153752-34153440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 159
               

               
Conread position:
               
100-417
               

               
Cow position:
               
chr16:17288768-17289092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 144
               

               
Conread position:
               
102-250
               

               
Cow position:
               
chr16:53037799-53037645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 137
               

               
Conread position:
               
102-304
               

               
Cow position:
               
chr16:33229901-33230107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
18, 141
               

               
Conread position:
               
102-392
               

               
Cow position:
               
chr16:5836406-5836702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
20, 78
               

               
Conread position:
               
102-404
               

               
Cow position:
               
chr16:17282491-17282788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 104
               

               
Conread position:
               
102-456
               

               
Cow position:
               
chr16:7549792-7550146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
103-350
               

               
Cow position:
               
chr16:54083859-54084113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
14, 134
               

               
Conread position:
               
103-403
               

               
Cow position:
               
chr16:45456784-45457093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
35, 100
               

               
Conread position:
               
106-461
               

               
Cow position:
               
chr16:22808723-22808364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 125
               

               
Conread position:
               
107-307
               

               
Cow position:
               
chr16:7496030-7496231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 76
               

               
Conread position:
               
107-456
               

               
Cow position:
               
chr16:14974703-14974363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
16, 63
               

               
Conread position:
               
108-406
               

               
Cow position:
               
chr16:25386819-25387107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
110-291
               

               
Cow position:
               
chr16:16280607-16280430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
8, 73
               

               
Conread position:
               
111-407
               

               
Cow position:
               
chr16:22380516-22380219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
16, 126
               

               
Conread position:
               
114-461
               

               
Cow position:
               
chr16:15808818-15809169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
136, 117
               

               
Conread position:
               
115-397
               

               
Cow position:
               
chr16:10772977-10773245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
112, 133
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr16:27723053-27723402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
8, 164
               

               
Conread position:
               
115-446
               

               
Cow position:
               
chr16:21317748-21317414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 16
               

               
Conread position:
               
116-283
               

               
Cow position:
               
chr16:9136020-9136191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
116-287
               

               
Cow position:
               
chr16:33357832-33357658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
116-337
               

               
Cow position:
               
chr16:10651046-10650824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
116-337
               

               
Cow position:
               
chr16:38191318-38191537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
116-342
               

               
Cow position:
               
chr16:22860915-22860700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
116-349
               

               
Cow position:
               
chr16:31268987-31269216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
116-391
               

               
Cow position:
               
chr16:8076664-8076383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
116-394
               

               
Cow position:
               
chr16:20069672-20069954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
10, 126
               

               
Conread position:
               
116-404
               

               
Cow position:
               
chr16:3303876-3304155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
11, 72
               

               
Conread position:
               
116-405
               

               
Cow position:
               
chr16:7418228-7418510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
116-405
               

               
Cow position:
               
chr16:12273912-12274199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
11, 133
               

               
Conread position:
               
116-405
               

               
Cow position:
               
chr16:33198590-33198308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 97
               

               
Conread position:
               
116-407
               

               
Cow position:
               
chr16:12320066-12320359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 95
               

               
Conread position:
               
116-407
               

               
Cow position:
               
chr16:29712264-29712552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
11, 121
               

               
Conread position:
               
116-451
               

               
Cow position:
               
chr16:9985542-9985202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
116-451
               

               
Cow position:
               
chr16:45692989-45693324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 117
               

               
Conread position:
               
116-460
               

               
Cow position:
               
chr16:46627990-46627656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
11, 45
               

               
Conread position:
               
117-349
               

               
Cow position:
               
chr16:6887600-6887374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
117-403
               

               
Cow position:
               
chr16:47964968-47964688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
272, 10
               

               
Conread position:
               
118-387
               

               
Cow position:
               
chr16:42345755-42345500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
120-405
               

               
Cow position:
               
chr16:35296921-35297209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
7, 72
               

               
Conread position:
               
124-398
               

               
Cow position:
               
chr16:8448791-8448529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
31, 37
               

               
Conread position:
               
126-334
               

               
Cow position:
               
chr16:21369338-21369545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 173
               

               
Conread position:
               
126-371
               

               
Cow position:
               
chr16:10352726-10352981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
126-382
               

               
Cow position:
               
chr16:41697232-41696983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
24, 106
               

               
Conread position:
               
126-388
               

               
Cow position:
               
chr16:8240010-8239754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
105, 79
               

               
Conread position:
               
126-396
               

               
Cow position:
               
chr16:52133660-52133394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
20, 108
               

               
Conread position:
               
126-404
               

               
Cow position:
               
chr16:20205311-20205593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
126-405
               

               
Cow position:
               
chr16:10592290-10592563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
248, 105
               

               
Conread position:
               
126-405
               

               
Cow position:
               
chr16:45677842-45678110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
126-406
               

               
Cow position:
               
chr16:12060272-12060551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
256, 106
               

               
Conread position:
               
126-407
               

               
Cow position:
               
chr16:22984616-22984886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
127-395
               

               
Cow position:
               
chr16:23366100-23366361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
128-404
               

               
Cow position:
               
chr16:25380639-25380365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
35, 110
               

               
Conread position:
               
128-461
               

               
Cow position:
               
chr16:56565453-56565798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
34, 105
               

               
Conread position:
               
129-331
               

               
Cow position:
               
chr16:14699777-14699976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 99
               

               
Conread position:
               
129-397
               

               
Cow position:
               
chr16:10504693-10504951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
256, 8
               

               
Conread position:
               
129-461
               

               
Cow position:
               
chr16:228627-228306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 18
               

               
Conread position:
               
129-461
               

               
Cow position:
               
chr16:33596077-33595737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
33, 98
               

               
Conread position:
               
130-402
               

               
Cow position:
               
chr16:47854802-47855066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
24, 81
               

               
Conread position:
               
131-407
               

               
Cow position:
               
chr16:54225646-54225381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
100, 59
               

               
Conread position:
               
132-407
               

               
Cow position:
               
chr16:31079236-31078956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
56, 90
               

               
Conread position:
               
132-426
               

               
Cow position:
               
chr16:45348247-45348538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
33, 80
               

               
Conread position:
               
132-454
               

               
Cow position:
               
chr16:54710172-54709850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
257, 100
               

               
Conread position:
               
132-461
               

               
Cow position:
               
chr16:280840-280482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
133-407
               

               
Cow position:
               
chr16:41578088-41578362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 104
               

               
Conread position:
               
133-418
               

               
Cow position:
               
chr16:9904955-9905233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 27
               

               
Conread position:
               
134-229
               

               
Cow position:
               
chr16:33986716-33986621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
134-349
               

               
Cow position:
               
chr16:19047575-19047358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 116
               

               
Conread position:
               
136-432
               

               
Cow position:
               
chr16:30136029-30135749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
26, 96
               

               
Conread position:
               
137-389
               

               
Cow position:
               
chr16:40446118-40446378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
137-461
               

               
Cow position:
               
chr16:27728115-27728449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
19, 62
               

               
Conread position:
               
138-402
               

               
Cow position:
               
chr16:33267583-33267848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
13, 107
               

               
Conread position:
               
138-407
               

               
Cow position:
               
chr16:7583264-7583534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
26, 113
               

               
Conread position:
               
138-459
               

               
Cow position:
               
chr16:36121113-36120788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
20, 107
               

               
Conread position:
               
139-378
               

               
Cow position:
               
chr16:48146789-48146554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
180, 66
               

               
Conread position:
               
139-404
               

               
Cow position:
               
chr16:39683240-39682970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 105
               

               
Conread position:
               
141-404
               

               
Cow position:
               
chr16:8737935-8738196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
142-394
               

               
Cow position:
               
chr16:55233566-55233802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
142-405
               

               
Cow position:
               
chr16:17903777-17903512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
92, 15
               

               
Conread position:
               
142-405
               

               
Cow position:
               
chr16:39172284-39172015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
90, 60
               

               
Conread position:
               
143-394
               

               
Cow position:
               
chr16:42977338-42977588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
162, 29
               

               
Conread position:
               
147-377
               

               
Cow position:
               
chr16:39402122-39401912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
147-405
               

               
Cow position:
               
chr16:53089465-53089223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
6, 84
               

               
Conread position:
               
148-404
               

               
Cow position:
               
chr16:2417712-2417459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
148-448
               

               
Cow position:
               
chr16:22206953-22207254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
94, 49
               

               
Conread position:
               
148-454
               

               
Cow position:
               
chr16:16565003-16565311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
100, 17
               

               
Conread position:
               
150-396
               

               
Cow position:
               
chr16:34754081-34753836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 82
               

               
Conread position:
               
151-340
               

               
Cow position:
               
chr16:27019955-27020138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
151-394
               

               
Cow position:
               
chr16:47852710-47852473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
73, 9
               

               
Conread position:
               
151-405
               

               
Cow position:
               
chr16:22327384-22327641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
152-390
               

               
Cow position:
               
chr16:21762090-21761853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
153-303
               

               
Cow position:
               
chr16:30615095-30614950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
153-404
               

               
Cow position:
               
chr16:7442216-7441971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
140, 10
               

               
Conread position:
               
153-457
               

               
Cow position:
               
chr16:50453647-50453954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
199, 7
               

               
Conread position:
               
154-448
               

               
Cow position:
               
chr16:54226715-54226417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 89
               

               
Conread position:
               
159-388
               

               
Cow position:
               
chr16:18745622-18745845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
9, 77
               

               
Conread position:
               
161-394
               

               
Cow position:
               
chr16:11939932-11940159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
224, 69
               

               
Conread position:
               
161-405
               

               
Cow position:
               
chr16:45121929-45122168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
228, 63
               

               
Conread position:
               
161-405
               

               
Cow position:
               
chr16:56796775-56796533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
70, 86
               

               
Conread position:
               
162-403
               

               
Cow position:
               
chr16:19052527-19052766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
21, 47
               

               
Conread position:
               
163-404
               

               
Cow position:
               
chr16:43674767-43675006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
109, 61
               

               
Conread position:
               
163-405
               

               
Cow position:
               
chr16:10945538-10945304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
226, 67
               

               
Conread position:
               
163-405
               

               
Cow position:
               
chr16:18052223-18052463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
230, 84
               

               
Conread position:
               
163-405
               

               
Cow position:
               
chr16:33869868-33869631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
220, 69
               

               
Conread position:
               
163-419
               

               
Cow position:
               
chr16:54734138-54734381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
163-461
               

               
Cow position:
               
chr16:16570807-16571094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
164-403
               

               
Cow position:
               
chr16:29677737-29677505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
164-458
               

               
Cow position:
               
chr16:40514587-40514286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 73
               

               
Conread position:
               
165-358
               

               
Cow position:
               
chr16:10162712-10162902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
165-373
               

               
Cow position:
               
chr16:31163232-31163027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
139, 86
               

               
Conread position:
               
165-384
               

               
Cow position:
               
chr16:27160971-27160753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
65, 83
               

               
Conread position:
               
165-392
               

               
Cow position:
               
chr16:50667180-50667410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
166-391
               

               
Cow position:
               
chr16:7619282-7619066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
220, 83
               

               
Conread position:
               
166-397
               

               
Cow position:
               
chr16:30186539-30186767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
206, 78
               

               
Conread position:
               
167-390
               

               
Cow position:
               
chr16:20871923-20872139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
168-459
               

               
Cow position:
               
chr16:42176541-42176830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
25, 76
               

               
Conread position:
               
169-461
               

               
Cow position:
               
chr16:21039926-21040216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
213, 42
               

               
Conread position:
               
172-349
               

               
Cow position:
               
chr16:4970785-4970961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
92, 75
               

               
Conread position:
               
175-404
               

               
Cow position:
               
chr16:32807388-32807163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
178-397
               

               
Cow position:
               
chr16:44683754-44683533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
117, 53
               

               
Conread position:
               
178-404
               

               
Cow position:
               
chr16:48545728-48545953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
211, 57
               

               
Conread position:
               
180-405
               

               
Cow position:
               
chr16:12501252-12501030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
28, 73
               

               
Conread position:
               
180-408
               

               
Cow position:
               
chr16:34220093-34220319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
69, 57
               

               
Conread position:
               
181-453
               

               
Cow position:
               
chr16:26030973-26030703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
175, 7
               

               
Conread position:
               
184-397
               

               
Cow position:
               
chr16:30359147-30358938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
205, 42
               

               
Conread position:
               
184-405
               

               
Cow position:
               
chr16:23955917-23955699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
206, 60
               

               
Conread position:
               
185-447
               

               
Cow position:
               
chr16:50931602-50931337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
181, 59
               

               
Conread position:
               
185-455
               

               
Cow position:
               
chr16:33134856-33135131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
204, 47
               

               
Conread position:
               
186-404
               

               
Cow position:
               
chr16:7980707-7980920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
6, 18
               

               
Conread position:
               
188-405
               

               
Cow position:
               
chr16:53792901-53792686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
110, 56
               

               
Conread position:
               
188-407
               

               
Cow position:
               
chr16:44428797-44429016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 204
               

               
Conread position:
               
189-389
               

               
Cow position:
               
chr16:42240968-42241163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
86, 46
               

               
Conread position:
               
189-458
               

               
Cow position:
               
chr16:16933037-16933306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
116, 42
               

               
Conread position:
               
191-377
               

               
Cow position:
               
chr16:50370516-50370698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
191-407
               

               
Cow position:
               
chr16:30305894-30305679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
177, 117
               

               
Conread position:
               
192-402
               

               
Cow position:
               
chr16:40700807-40700607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
195, 52
               

               
Conread position:
               
192-405
               

               
Cow position:
               
chr16:9500438-9500655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
192-405
               

               
Cow position:
               
chr16:31426265-31426472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
193-381
               

               
Cow position:
               
chr16:38091302-38091115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
194-404
               

               
Cow position:
               
chr16:9552984-9553187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
196-389
               

               
Cow position:
               
chr16:42539664-42539473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
196-457
               

               
Cow position:
               
chr16:8530959-8530691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
162, 41
               

               
Conread position:
               
197-413
               

               
Cow position:
               
chr16:29527750-29527967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
39, 61
               

               
Conread position:
               
200-400
               

               
Cow position:
               
chr16:12077548-12077359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
189, 11
               

               
Conread position:
               
202-397
               

               
Cow position:
               
chr16:17135659-17135849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
183, 49
               

               
Conread position:
               
202-459
               

               
Cow position:
               
chr16:42433184-42432909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
204-403
               

               
Cow position:
               
chr16:11135049-11134851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
204-408
               

               
Cow position:
               
chr16:31561685-31561891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
206-403
               

               
Cow position:
               
chr16:15953887-15953688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
87, 48
               

               
Conread position:
               
206-407
               

               
Cow position:
               
chr16:56243950-56243752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
174, 31
               

               
Conread position:
               
208-406
               

               
Cow position:
               
chr16:45294480-45294683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
140, 53
               

               
Conread position:
               
211-404
               

               
Cow position:
               
chr16:46430212-46430021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
16, 34
               

               
Conread position:
               
211-456
               

               
Cow position:
               
chr16:19657197-19656959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
30, 77
               

               
Conread position:
               
214-403
               

               
Cow position:
               
chr16:31484722-31484532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 160
               

               
Conread position:
               
221-461
               

               
Cow position:
               
chr16:34291342-34291089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
169, 26
               

               
Conread position:
               
223-405
               

               
Cow position:
               
chr16:15905299-15905117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
167, 31
               

               
Conread position:
               
224-400
               

               
Cow position:
               
chr16:12010047-12010223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
165, 13
               

               
Conread position:
               
226-461
               

               
Cow position:
               
chr16:53408977-53408737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
230-385
               

               
Cow position:
               
chr16:7626115-7626271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
232-412
               

               
Cow position:
               
chr16:5382136-5382321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
9, 165
               

               
Conread position:
               
233-404
               

               
Cow position:
               
chr16:24403468-24403300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
237-402
               

               
Cow position:
               
chr16:20824441-20824606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
237-407
               

               
Cow position:
               
chr16:49860196-49860370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 138
               

               
Conread position:
               
237-455
               

               
Cow position:
               
chr16:37401215-37401442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
56, 135
               

               
Conread position:
               
237-457
               

               
Cow position:
               
chr16:13712969-13712736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
237-461
               

               
Cow position:
               
chr16:19815283-19815061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
137, 149
               

               
Conread position:
               
238-387
               

               
Cow position:
               
chr16:44713516-44713366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 98
               

               
Conread position:
               
238-389
               

               
Cow position:
               
chr16:12133825-12133976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
238-394
               

               
Cow position:
               
chr16:55945175-55945019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
238-399
               

               
Cow position:
               
chr16:9578525-9578365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
151, 16
               

               
Conread position:
               
238-405
               

               
Cow position:
               
chr16:50442513-50442680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
133, 125
               

               
Conread position:
               
238-413
               

               
Cow position:
               
chr16:17292056-17291882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
239-455
               

               
Cow position:
               
chr16:29636264-29636041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
101, 13
               

               
Conread position:
               
240-397
               

               
Cow position:
               
chr16:13414698-13414541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
149, 9
               

               
Conread position:
               
240-405
               

               
Cow position:
               
chr16:21370220-21370057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
150, 53
               

               
Conread position:
               
241-400
               

               
Cow position:
               
chr16:11359120-11359278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
241-454
               

               
Cow position:
               
chr16:13531782-13531988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
149, 8
               

               
Conread position:
               
241-461
               

               
Cow position:
               
chr16:8441837-8441622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
242-407
               

               
Cow position:
               
chr16:7723670-7723836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
243-407
               

               
Cow position:
               
chr16:9958799-9958965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 7
               

               
Conread position:
               
244-404
               

               
Cow position:
               
chr16:7812660-7812820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 148
               

               
Conread position:
               
244-406
               

               
Cow position:
               
chr16:11584432-11584271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
145, 10
               

               
Conread position:
               
244-447
               

               
Cow position:
               
chr16:17283417-17283638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
245-397
               

               
Cow position:
               
chr16:45046808-45046963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
21, 73
               

               
Conread position:
               
246-404
               

               
Cow position:
               
chr16:22738253-22738406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
143, 38
               

               
Conread position:
               
247-404
               

               
Cow position:
               
chr16:15407583-15407427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
127, 52
               

               
Conread position:
               
247-405
               

               
Cow position:
               
chr16:11390312-11390150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
248-396
               

               
Cow position:
               
chr16:29886208-29886057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
252-394
               

               
Cow position:
               
chr16:8065671-8065525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
253-405
               

               
Cow position:
               
chr16:24591832-24591986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
254-397
               

               
Cow position:
               
chr16:29026189-29026330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
131, 59
               

               
Conread position:
               
254-403
               

               
Cow position:
               
chr16:8273857-8273707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
254-404
               

               
Cow position:
               
chr16:9830426-9830578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
135, 93
               

               
Conread position:
               
254-405
               

               
Cow position:
               
chr16:12097622-12097774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
254-407
               

               
Cow position:
               
chr16:13252325-13252175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
135, 45
               

               
Conread position:
               
256-404
               

               
Cow position:
               
chr16:50286496-50286644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
133, 39
               

               
Conread position:
               
256-407
               

               
Cow position:
               
chr16:12324438-12324590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
257-407
               

               
Cow position:
               
chr16:31149362-31149511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
132, 77
               

               
Conread position:
               
258-456
               

               
Cow position:
               
chr16:35297391-35297607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
260-405
               

               
Cow position:
               
chr16:20265575-20265428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
129, 17
               

               
Conread position:
               
260-405
               

               
Cow position:
               
chr16:24142972-24142826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
6, 58
               

               
Conread position:
               
261-387
               

               
Cow position:
               
chr16:40540324-40540446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
261-397
               

               
Cow position:
               
chr16:32893616-32893752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
262-409
               

               
Cow position:
               
chr16:15715971-15715823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 117
               

               
Conread position:
               
263-387
               

               
Cow position:
               
chr16:31046690-31046566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
264-460
               

               
Cow position:
               
chr16:9836782-9836572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
270-426
               

               
Cow position:
               
chr16:7928388-7928234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
273-404
               

               
Cow position:
               
chr16:29145282-29145154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
116, 88
               

               
Conread position:
               
273-440
               

               
Cow position:
               
chr16:3466857-3467033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
275-405
               

               
Cow position:
               
chr16:16025438-16025570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
275-407
               

               
Cow position:
               
chr16:17736240-17736372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
276-404
               

               
Cow position:
               
chr16:33357383-33357263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
276-412
               

               
Cow position:
               
chr16:9513297-9513432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
277-455
               

               
Cow position:
               
chr16:41807098-41806919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
124, 143
               

               
Conread position:
               
282-421
               

               
Cow position:
               
chr16:39416826-39416687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
287-459
               

               
Cow position:
               
chr16:16178046-16178233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
105, 77
               

               
Conread position:
               
295-458
               

               
Cow position:
               
chr16:26069772-26069946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
296-405
               

               
Cow position:
               
chr16:20556071-20555963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
300-452
               

               
Cow position:
               
chr16:15171369-15171217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
310-439
               

               
Cow position:
               
chr16:47773997-47774137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
327-460
               

               
Cow position:
               
chr16:53037388-53037252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               
Show alignments to all cow chromosomes.