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Cow genome map

           
Conread name:
           
Mixn-0029m24
        

               
Conread position:
               
3-283
               

               
Cow position:
               
chr25:35344762-35345038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
121, 45
               

               
Conread position:
               
3-310
               

               
Cow position:
               
chr25:35332897-35333192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
149, 46
               

               
Conread position:
               
3-326
               

               
Cow position:
               
chr25:9754361-9754046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
123, 84
               

               
Conread position:
               
3-329
               

               
Cow position:
               
chr25:33260464-33260785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
117, 45
               

               
Conread position:
               
3-342
               

               
Cow position:
               
chr25:12081591-12081256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
75, 45
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr25:35612579-35612240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
14, 47
               

               
Conread position:
               
3-372
               

               
Cow position:
               
chr25:10012323-10011963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
113, 19
               

               
Conread position:
               
3-380
               

               
Cow position:
               
chr25:36037056-36036675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 45
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr25:33978477-33978100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
153, 45
               

               
Conread position:
               
3-405
               

               
Cow position:
               
chr25:38135473-38135876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 19
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr25:5407473-5407907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
14, 50
               

               
Conread position:
               
3-455
               

               
Cow position:
               
chr25:4680987-4681406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
374, 44
               

               
Conread position:
               
3-455
               

               
Cow position:
               
chr25:8512367-8511910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
119, 51
               

               
Conread position:
               
3-456
               

               
Cow position:
               
chr25:14833929-14833466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 45
               

               
Conread position:
               
3-459
               

               
Cow position:
               
chr25:24406016-24405547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 49
               

               
Conread position:
               
3-459
               

               
Cow position:
               
chr25:24452444-24451976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
91, 37
               

               
Conread position:
               
3-460
               

               
Cow position:
               
chr25:11131309-11131767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 45
               

               
Conread position:
               
3-461
               

               
Cow position:
               
chr25:37594138-37594592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
114, 46
               

               
Conread position:
               
4-338
               

               
Cow position:
               
chr25:5837241-5836895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
117, 44
               

               
Conread position:
               
4-407
               

               
Cow position:
               
chr25:20007865-20008267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 99
               

               
Conread position:
               
5-405
               

               
Cow position:
               
chr25:14196581-14196991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 250
               

               
Conread position:
               
6-213
               

               
Cow position:
               
chr25:17702236-17702030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
175, 104
               

               
Conread position:
               
6-287
               

               
Cow position:
               
chr25:12824284-12824006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
128, 10
               

               
Conread position:
               
6-361
               

               
Cow position:
               
chr25:22910117-22909772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
179, 36
               

               
Conread position:
               
6-406
               

               
Cow position:
               
chr25:9990364-9989980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 43
               

               
Conread position:
               
7-188
               

               
Cow position:
               
chr25:18935147-18934957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
7-338
               

               
Cow position:
               
chr25:15319649-15319982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
82, 33
               

               
Conread position:
               
7-349
               

               
Cow position:
               
chr25:6464301-6463958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
94, 41
               

               
Conread position:
               
7-423
               

               
Cow position:
               
chr25:33256097-33256499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
113, 40
               

               
Conread position:
               
7-447
               

               
Cow position:
               
chr25:20076222-20076672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 40
               

               
Conread position:
               
8-228
               

               
Cow position:
               
chr25:25961693-25961916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
95, 40
               

               
Conread position:
               
8-267
               

               
Cow position:
               
chr25:20394938-20395183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
115, 8
               

               
Conread position:
               
8-387
               

               
Cow position:
               
chr25:20023668-20023275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
8-455
               

               
Cow position:
               
chr25:2414565-2414998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
119, 8
               

               
Conread position:
               
8-455
               

               
Cow position:
               
chr25:6474369-6473899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 39
               

               
Conread position:
               
9-358
               

               
Cow position:
               
chr25:12817103-12817447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
111, 40
               

               
Conread position:
               
9-359
               

               
Cow position:
               
chr25:9396183-9396528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
111, 13
               

               
Conread position:
               
9-387
               

               
Cow position:
               
chr25:40321562-40321178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 38
               

               
Conread position:
               
9-407
               

               
Cow position:
               
chr25:26087245-26087651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 39
               

               
Conread position:
               
9-459
               

               
Cow position:
               
chr25:26225309-26224831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
111, 38
               

               
Conread position:
               
10-204
               

               
Cow position:
               
chr25:2110814-2111008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
102, 38
               

               
Conread position:
               
10-250
               

               
Cow position:
               
chr25:8347240-8347485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
10-258
               

               
Cow position:
               
chr25:33839119-33839365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
158, 39
               

               
Conread position:
               
10-287
               

               
Cow position:
               
chr25:5514738-5515025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
110, 37
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr25:12204201-12204488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-295
               

               
Cow position:
               
chr25:10330663-10330393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
136, 38
               

               
Conread position:
               
10-300
               

               
Cow position:
               
chr25:36779227-36779525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
112, 37
               

               
Conread position:
               
10-307
               

               
Cow position:
               
chr25:25827196-25827502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
103, 30
               

               
Conread position:
               
10-309
               

               
Cow position:
               
chr25:9023376-9023666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
121, 38
               

               
Conread position:
               
10-313
               

               
Cow position:
               
chr25:7800867-7801180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
112, 38
               

               
Conread position:
               
10-316
               

               
Cow position:
               
chr25:5341382-5341693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
87, 40
               

               
Conread position:
               
10-316
               

               
Cow position:
               
chr25:9957301-9956998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 38
               

               
Conread position:
               
10-340
               

               
Cow position:
               
chr25:12261163-12260825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
10-349
               

               
Cow position:
               
chr25:20348589-20348942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
117, 41
               

               
Conread position:
               
10-349
               

               
Cow position:
               
chr25:33959529-33959179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-362
               

               
Cow position:
               
chr25:14117840-14118177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
10-376
               

               
Cow position:
               
chr25:26523710-26524056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
10-378
               

               
Cow position:
               
chr25:6226772-6227137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
10-387
               

               
Cow position:
               
chr25:18564226-18564597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 46
               

               
Conread position:
               
10-387
               

               
Cow position:
               
chr25:21950857-21951241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
113, 38
               

               
Conread position:
               
10-388
               

               
Cow position:
               
chr25:30319718-30319341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-397
               

               
Cow position:
               
chr25:36761837-36762227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-400
               

               
Cow position:
               
chr25:16866963-16867366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
109, 37
               

               
Conread position:
               
10-404
               

               
Cow position:
               
chr25:21245875-21245475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 37
               

               
Conread position:
               
10-405
               

               
Cow position:
               
chr25:3145577-3145971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
10-405
               

               
Cow position:
               
chr25:8120508-8120908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 29
               

               
Conread position:
               
10-407
               

               
Cow position:
               
chr25:16064628-16065024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 37
               

               
Conread position:
               
10-407
               

               
Cow position:
               
chr25:22203959-22203564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
10-408
               

               
Cow position:
               
chr25:4522086-4521707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
379, 36
               

               
Conread position:
               
10-452
               

               
Cow position:
               
chr25:17975636-17975201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 38
               

               
Conread position:
               
11-387
               

               
Cow position:
               
chr25:38981845-38982204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
11-387
               

               
Cow position:
               
chr25:39549460-39549098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
117, 40
               

               
Conread position:
               
11-391
               

               
Cow position:
               
chr25:20460855-20461217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
11-392
               

               
Cow position:
               
chr25:25051652-25051261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 37
               

               
Conread position:
               
11-405
               

               
Cow position:
               
chr25:11830164-11829786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
107, 37
               

               
Conread position:
               
11-407
               

               
Cow position:
               
chr25:788001-788390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
98, 37
               

               
Conread position:
               
11-407
               

               
Cow position:
               
chr25:3992522-3992913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
110, 37
               

               
Conread position:
               
11-407
               

               
Cow position:
               
chr25:33664164-33663776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
119, 38
               

               
Conread position:
               
12-223
               

               
Cow position:
               
chr25:21266739-21266961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
63, 37
               

               
Conread position:
               
12-293
               

               
Cow position:
               
chr25:5792073-5791783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
100, 35
               

               
Conread position:
               
12-367
               

               
Cow position:
               
chr25:9349524-9349193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
124, 36
               

               
Conread position:
               
12-400
               

               
Cow position:
               
chr25:7216561-7216949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 36
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr25:22314934-22315337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 36
               

               
Conread position:
               
12-455
               

               
Cow position:
               
chr25:18000781-18000348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
386, 25
               

               
Conread position:
               
16-389
               

               
Cow position:
               
chr25:32191408-32191767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
102, 32
               

               
Conread position:
               
16-407
               

               
Cow position:
               
chr25:36746708-36746315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
17-226
               

               
Cow position:
               
chr25:27594041-27594251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 93
               

               
Conread position:
               
17-280
               

               
Cow position:
               
chr25:14225057-14224799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
114, 30
               

               
Conread position:
               
17-368
               

               
Cow position:
               
chr25:33691292-33691650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
17-397
               

               
Cow position:
               
chr25:6683323-6682939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
17-405
               

               
Cow position:
               
chr25:22531025-22531411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 31
               

               
Conread position:
               
17-407
               

               
Cow position:
               
chr25:7306036-7306423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
102, 31
               

               
Conread position:
               
17-407
               

               
Cow position:
               
chr25:24572811-24573195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 98
               

               
Conread position:
               
17-407
               

               
Cow position:
               
chr25:33550244-33550644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 31
               

               
Conread position:
               
17-419
               

               
Cow position:
               
chr25:12117248-12116854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
84, 31
               

               
Conread position:
               
17-453
               

               
Cow position:
               
chr25:15273428-15273863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 31
               

               
Conread position:
               
17-461
               

               
Cow position:
               
chr25:18988115-18988559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 33
               

               
Conread position:
               
18-246
               

               
Cow position:
               
chr25:9961439-9961196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
18-271
               

               
Cow position:
               
chr25:15694722-15694977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
79, 199
               

               
Conread position:
               
18-308
               

               
Cow position:
               
chr25:6891781-6891503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
108, 159
               

               
Conread position:
               
18-347
               

               
Cow position:
               
chr25:18294575-18294243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
94, 214
               

               
Conread position:
               
18-348
               

               
Cow position:
               
chr25:2046815-2046488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
108, 219
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr25:18075408-18075737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
18-388
               

               
Cow position:
               
chr25:27821150-27821522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
99, 30
               

               
Conread position:
               
18-395
               

               
Cow position:
               
chr25:1837979-1838360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 30
               

               
Conread position:
               
18-397
               

               
Cow position:
               
chr25:26700779-26701147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 28
               

               
Conread position:
               
18-405
               

               
Cow position:
               
chr25:15714620-15715003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 30
               

               
Conread position:
               
18-405
               

               
Cow position:
               
chr25:17566326-17566717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
18-407
               

               
Cow position:
               
chr25:19679081-19679485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 33
               

               
Conread position:
               
18-455
               

               
Cow position:
               
chr25:12778795-12778360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 175
               

               
Conread position:
               
18-455
               

               
Cow position:
               
chr25:26654646-26655092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 31
               

               
Conread position:
               
18-459
               

               
Cow position:
               
chr25:25754257-25753819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
99, 33
               

               
Conread position:
               
19-339
               

               
Cow position:
               
chr25:18487414-18487731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
112, 29
               

               
Conread position:
               
19-394
               

               
Cow position:
               
chr25:27531527-27531152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
104, 29
               

               
Conread position:
               
21-218
               

               
Cow position:
               
chr25:10746642-10746843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 27
               

               
Conread position:
               
21-281
               

               
Cow position:
               
chr25:10137840-10138099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
99, 27
               

               
Conread position:
               
22-397
               

               
Cow position:
               
chr25:448602-448220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
23-404
               

               
Cow position:
               
chr25:13325345-13325707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
152, 45
               

               
Conread position:
               
25-314
               

               
Cow position:
               
chr25:8560615-8560907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
25-376
               

               
Cow position:
               
chr25:16319386-16319040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
97, 24
               

               
Conread position:
               
25-406
               

               
Cow position:
               
chr25:19129600-19129986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 5
               

               
Conread position:
               
25-451
               

               
Cow position:
               
chr25:18265910-18266340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
85, 22
               

               
Conread position:
               
25-459
               

               
Cow position:
               
chr25:10156337-10156758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 23
               

               
Conread position:
               
25-460
               

               
Cow position:
               
chr25:9055939-9056362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 135
               

               
Conread position:
               
26-229
               

               
Cow position:
               
chr25:36026754-36026965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr25:10366005-10365779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
86, 22
               

               
Conread position:
               
26-283
               

               
Cow position:
               
chr25:4002543-4002809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
26-287
               

               
Cow position:
               
chr25:8918531-8918265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 23
               

               
Conread position:
               
26-287
               

               
Cow position:
               
chr25:16001774-16001514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 221
               

               
Conread position:
               
26-297
               

               
Cow position:
               
chr25:31732989-31732713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
91, 22
               

               
Conread position:
               
26-328
               

               
Cow position:
               
chr25:2194694-2194983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
90, 23
               

               
Conread position:
               
26-340
               

               
Cow position:
               
chr25:6886230-6885907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
75, 22
               

               
Conread position:
               
26-389
               

               
Cow position:
               
chr25:30279461-30279095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
91, 126
               

               
Conread position:
               
26-397
               

               
Cow position:
               
chr25:4547973-4547598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
26-404
               

               
Cow position:
               
chr25:7581680-7581299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 21
               

               
Conread position:
               
26-404
               

               
Cow position:
               
chr25:36535685-36535291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
94, 26
               

               
Conread position:
               
26-405
               

               
Cow position:
               
chr25:14791499-14791883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 22
               

               
Conread position:
               
26-405
               

               
Cow position:
               
chr25:15254584-15254218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
26-405
               

               
Cow position:
               
chr25:26238618-26238991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
26-405
               

               
Cow position:
               
chr25:28188201-28187815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 21
               

               
Conread position:
               
26-406
               

               
Cow position:
               
chr25:22297270-22296898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
67, 23
               

               
Conread position:
               
26-407
               

               
Cow position:
               
chr25:11662072-11661686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 21
               

               
Conread position:
               
26-407
               

               
Cow position:
               
chr25:21193196-21192808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
93, 26
               

               
Conread position:
               
26-412
               

               
Cow position:
               
chr25:23829370-23828993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 22
               

               
Conread position:
               
26-420
               

               
Cow position:
               
chr25:13569420-13569031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
106, 22
               

               
Conread position:
               
26-421
               

               
Cow position:
               
chr25:12097589-12097977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
26-431
               

               
Cow position:
               
chr25:5847059-5846655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
26-434
               

               
Cow position:
               
chr25:20785834-20785433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 26
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr25:36081621-36082061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 14
               

               
Conread position:
               
26-452
               

               
Cow position:
               
chr25:11437055-11436626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
26-454
               

               
Cow position:
               
chr25:10643563-10643116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
92, 22
               

               
Conread position:
               
26-457
               

               
Cow position:
               
chr25:35347652-35348108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
26-458
               

               
Cow position:
               
chr25:14512863-14513310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
26-461
               

               
Cow position:
               
chr25:16400503-16400102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
125, 22
               

               
Conread position:
               
27-224
               

               
Cow position:
               
chr25:17712282-17712488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
27-375
               

               
Cow position:
               
chr25:41354558-41354206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
95, 22
               

               
Conread position:
               
27-407
               

               
Cow position:
               
chr25:24669682-24669319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 23
               

               
Conread position:
               
27-407
               

               
Cow position:
               
chr25:30852522-30852898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
192, 20
               

               
Conread position:
               
27-447
               

               
Cow position:
               
chr25:23410411-23410833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
27-459
               

               
Cow position:
               
chr25:24136687-24136259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
28-405
               

               
Cow position:
               
chr25:11585267-11585648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 20
               

               
Conread position:
               
30-221
               

               
Cow position:
               
chr25:17354133-17354327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
96, 18
               

               
Conread position:
               
30-338
               

               
Cow position:
               
chr25:20211335-20211014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
30-349
               

               
Cow position:
               
chr25:20020236-20019930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
94, 19
               

               
Conread position:
               
30-394
               

               
Cow position:
               
chr25:10504585-10504222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 186
               

               
Conread position:
               
32-248
               

               
Cow position:
               
chr25:15286791-15286565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 157
               

               
Conread position:
               
32-442
               

               
Cow position:
               
chr25:15368431-15368863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 17
               

               
Conread position:
               
33-213
               

               
Cow position:
               
chr25:19576686-19576504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 116
               

               
Conread position:
               
33-396
               

               
Cow position:
               
chr25:16922040-16921675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
33-459
               

               
Cow position:
               
chr25:18293511-18293915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
95, 14
               

               
Conread position:
               
35-323
               

               
Cow position:
               
chr25:1735560-1735274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
35-388
               

               
Cow position:
               
chr25:6470464-6470097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
35-406
               

               
Cow position:
               
chr25:21895131-21894757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 209
               

               
Conread position:
               
39-290
               

               
Cow position:
               
chr25:7329303-7329562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
79, 168
               

               
Conread position:
               
41-333
               

               
Cow position:
               
chr25:9642115-9642415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
81, 118
               

               
Conread position:
               
41-343
               

               
Cow position:
               
chr25:38425126-38425428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
79, 214
               

               
Conread position:
               
41-397
               

               
Cow position:
               
chr25:19478448-19478797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
19, 93
               

               
Conread position:
               
41-402
               

               
Cow position:
               
chr25:61418-61775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
79, 168
               

               
Conread position:
               
42-367
               

               
Cow position:
               
chr25:15377095-15377417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 148
               

               
Conread position:
               
42-388
               

               
Cow position:
               
chr25:22369155-22369496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
70, 162
               

               
Conread position:
               
42-388
               

               
Cow position:
               
chr25:41132593-41132249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
80, 191
               

               
Conread position:
               
42-448
               

               
Cow position:
               
chr25:8576455-8576868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
78, 176
               

               
Conread position:
               
43-209
               

               
Cow position:
               
chr25:24008414-24008238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
43-349
               

               
Cow position:
               
chr25:21289103-21289418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 176
               

               
Conread position:
               
43-381
               

               
Cow position:
               
chr25:2136114-2136455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
77, 263
               

               
Conread position:
               
43-397
               

               
Cow position:
               
chr25:7641690-7641328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 11
               

               
Conread position:
               
43-460
               

               
Cow position:
               
chr25:20069483-20069918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
79, 186
               

               
Conread position:
               
44-396
               

               
Cow position:
               
chr25:12840954-12840597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 41
               

               
Conread position:
               
44-404
               

               
Cow position:
               
chr25:23917604-23917969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 188
               

               
Conread position:
               
44-407
               

               
Cow position:
               
chr25:9269135-9269473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
44-447
               

               
Cow position:
               
chr25:40957223-40956813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
76, 47
               

               
Conread position:
               
44-448
               

               
Cow position:
               
chr25:20625167-20624762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
88, 111
               

               
Conread position:
               
45-389
               

               
Cow position:
               
chr25:26338210-26338571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
77, 213
               

               
Conread position:
               
46-229
               

               
Cow position:
               
chr25:6256172-6255980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
74, 41
               

               
Conread position:
               
46-262
               

               
Cow position:
               
chr25:6815014-6815229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 137
               

               
Conread position:
               
46-293
               

               
Cow position:
               
chr25:11054686-11054921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
47-405
               

               
Cow position:
               
chr25:35826509-35826151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
54, 152
               

               
Conread position:
               
50-309
               

               
Cow position:
               
chr25:36033206-36033472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
56, 190
               

               
Conread position:
               
50-391
               

               
Cow position:
               
chr25:6961380-6961037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 49
               

               
Conread position:
               
54-316
               

               
Cow position:
               
chr25:12239374-12239107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 51
               

               
Conread position:
               
54-404
               

               
Cow position:
               
chr25:10218277-10217922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
27, 200
               

               
Conread position:
               
54-406
               

               
Cow position:
               
chr25:34169728-34170075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
69, 134
               

               
Conread position:
               
57-405
               

               
Cow position:
               
chr25:7007693-7008040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
61, 50
               

               
Conread position:
               
61-270
               

               
Cow position:
               
chr25:12899536-12899753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 15
               

               
Conread position:
               
76-300
               

               
Cow position:
               
chr25:26270138-26269913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
44, 78
               

               
Conread position:
               
76-373
               

               
Cow position:
               
chr25:16714478-16714173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
42, 142
               

               
Conread position:
               
76-404
               

               
Cow position:
               
chr25:8157714-8157383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
40, 234
               

               
Conread position:
               
76-441
               

               
Cow position:
               
chr25:18905681-18906047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
76-461
               

               
Cow position:
               
chr25:17704545-17704945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 142
               

               
Conread position:
               
79-281
               

               
Cow position:
               
chr25:14945643-14945445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
79-394
               

               
Cow position:
               
chr25:22178720-22179035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 142
               

               
Conread position:
               
79-395
               

               
Cow position:
               
chr25:27801089-27801396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
22, 87
               

               
Conread position:
               
79-405
               

               
Cow position:
               
chr25:36017339-36017663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
79-407
               

               
Cow position:
               
chr25:2624604-2624927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
41, 140
               

               
Conread position:
               
79-451
               

               
Cow position:
               
chr25:34768921-34768551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
41, 110
               

               
Conread position:
               
80-461
               

               
Cow position:
               
chr25:26090014-26089619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 138
               

               
Conread position:
               
82-405
               

               
Cow position:
               
chr25:12319536-12319223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
149, 40
               

               
Conread position:
               
82-438
               

               
Cow position:
               
chr25:13387614-13387971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 112
               

               
Conread position:
               
86-367
               

               
Cow position:
               
chr25:21042193-21042472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
89-407
               

               
Cow position:
               
chr25:7750276-7750582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
89-452
               

               
Cow position:
               
chr25:14720561-14720930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 110
               

               
Conread position:
               
90-389
               

               
Cow position:
               
chr25:18894901-18894615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
90-407
               

               
Cow position:
               
chr25:20523408-20523103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
99-391
               

               
Cow position:
               
chr25:20133491-20133199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
39, 138
               

               
Conread position:
               
102-397
               

               
Cow position:
               
chr25:17190922-17190625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
23, 78
               

               
Conread position:
               
102-407
               

               
Cow position:
               
chr25:23779492-23779200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
41, 61
               

               
Conread position:
               
106-440
               

               
Cow position:
               
chr25:22241812-22242135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
54, 84
               

               
Conread position:
               
107-405
               

               
Cow position:
               
chr25:17144254-17144564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
13, 43
               

               
Conread position:
               
107-455
               

               
Cow position:
               
chr25:26457853-26457495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
13, 130
               

               
Conread position:
               
111-403
               

               
Cow position:
               
chr25:9002512-9002797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
16, 117
               

               
Conread position:
               
114-455
               

               
Cow position:
               
chr25:31732494-31732133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
115-389
               

               
Cow position:
               
chr25:25861519-25861238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
24, 43
               

               
Conread position:
               
116-348
               

               
Cow position:
               
chr25:26133882-26134115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
48, 11
               

               
Conread position:
               
116-349
               

               
Cow position:
               
chr25:17342297-17342531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
48, 11
               

               
Conread position:
               
116-391
               

               
Cow position:
               
chr25:13672234-13672519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
11, 131
               

               
Conread position:
               
116-403
               

               
Cow position:
               
chr25:21893180-21893465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
116-404
               

               
Cow position:
               
chr25:13443566-13443283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 31
               

               
Conread position:
               
116-407
               

               
Cow position:
               
chr25:11315752-11316035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
116-454
               

               
Cow position:
               
chr25:12510162-12509821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
117-338
               

               
Cow position:
               
chr25:16570460-16570664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
152, 15
               

               
Conread position:
               
117-386
               

               
Cow position:
               
chr25:8961618-8961880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
109, 87
               

               
Conread position:
               
119-386
               

               
Cow position:
               
chr25:30816736-30816999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
121-347
               

               
Cow position:
               
chr25:11066300-11066072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
43, 126
               

               
Conread position:
               
122-459
               

               
Cow position:
               
chr25:34379254-34378910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
114, 24
               

               
Conread position:
               
125-405
               

               
Cow position:
               
chr25:22751157-22750876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 120
               

               
Conread position:
               
126-347
               

               
Cow position:
               
chr25:19317112-19317336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
126-349
               

               
Cow position:
               
chr25:6996635-6996857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 105
               

               
Conread position:
               
126-394
               

               
Cow position:
               
chr25:6687803-6688063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
105, 50
               

               
Conread position:
               
126-394
               

               
Cow position:
               
chr25:15440927-15440663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
36, 122
               

               
Conread position:
               
126-405
               

               
Cow position:
               
chr25:12609198-12609471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
269, 80
               

               
Conread position:
               
126-405
               

               
Cow position:
               
chr25:30618919-30619193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 34
               

               
Conread position:
               
126-407
               

               
Cow position:
               
chr25:41151107-41150831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
232, 70
               

               
Conread position:
               
126-415
               

               
Cow position:
               
chr25:21668099-21668390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
123, 137
               

               
Conread position:
               
126-426
               

               
Cow position:
               
chr25:7380987-7380692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
17, 74
               

               
Conread position:
               
126-448
               

               
Cow position:
               
chr25:24651598-24651263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
30, 103
               

               
Conread position:
               
126-451
               

               
Cow position:
               
chr25:7673133-7673475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
126-460
               

               
Cow position:
               
chr25:12755639-12755285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
36, 124
               

               
Conread position:
               
127-349
               

               
Cow position:
               
chr25:5920792-5921017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
127-387
               

               
Cow position:
               
chr25:26679082-26679337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
128-404
               

               
Cow position:
               
chr25:5474371-5474103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
24, 94
               

               
Conread position:
               
128-405
               

               
Cow position:
               
chr25:13272428-13272698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 41
               

               
Conread position:
               
129-407
               

               
Cow position:
               
chr25:23245153-23244871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
43, 115
               

               
Conread position:
               
130-343
               

               
Cow position:
               
chr25:10135288-10135501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 129
               

               
Conread position:
               
130-422
               

               
Cow position:
               
chr25:12997449-12997752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
32, 124
               

               
Conread position:
               
131-387
               

               
Cow position:
               
chr25:22730691-22730939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
21, 61
               

               
Conread position:
               
132-376
               

               
Cow position:
               
chr25:20216692-20216932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 101
               

               
Conread position:
               
132-395
               

               
Cow position:
               
chr25:34979008-34978743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
132-405
               

               
Cow position:
               
chr25:33686820-33686557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
134-344
               

               
Cow position:
               
chr25:24051824-24052034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
105, 77
               

               
Conread position:
               
136-394
               

               
Cow position:
               
chr25:24203129-24202894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
138-407
               

               
Cow position:
               
chr25:19364193-19363927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
250, 24
               

               
Conread position:
               
139-405
               

               
Cow position:
               
chr25:448301-448036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 107
               

               
Conread position:
               
140-335
               

               
Cow position:
               
chr25:7449675-7449859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
140-388
               

               
Cow position:
               
chr25:14157489-14157737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 7
               

               
Conread position:
               
140-404
               

               
Cow position:
               
chr25:9843043-9843305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 70
               

               
Conread position:
               
146-405
               

               
Cow position:
               
chr25:36872232-36872488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 91
               

               
Conread position:
               
147-397
               

               
Cow position:
               
chr25:4245564-4245790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
147-405
               

               
Cow position:
               
chr25:1824221-1823966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
84, 63
               

               
Conread position:
               
147-405
               

               
Cow position:
               
chr25:18202052-18201801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
15, 101
               

               
Conread position:
               
147-407
               

               
Cow position:
               
chr25:33457604-33457862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 72
               

               
Conread position:
               
147-409
               

               
Cow position:
               
chr25:11051403-11051660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
6, 28
               

               
Conread position:
               
148-426
               

               
Cow position:
               
chr25:17119622-17119889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
129, 17
               

               
Conread position:
               
149-461
               

               
Cow position:
               
chr25:12932510-12932814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
151-336
               

               
Cow position:
               
chr25:26642461-26642647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
22, 87
               

               
Conread position:
               
151-407
               

               
Cow position:
               
chr25:11433075-11432813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
57, 82
               

               
Conread position:
               
152-360
               

               
Cow position:
               
chr25:13640263-13640468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
150, 91
               

               
Conread position:
               
152-407
               

               
Cow position:
               
chr25:33557153-33557399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
231, 79
               

               
Conread position:
               
154-378
               

               
Cow position:
               
chr25:14809161-14809375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
158-389
               

               
Cow position:
               
chr25:22341411-22341638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
159-447
               

               
Cow position:
               
chr25:36555803-36555506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
230, 85
               

               
Conread position:
               
160-405
               

               
Cow position:
               
chr25:13566849-13567097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
160-409
               

               
Cow position:
               
chr25:25716539-25716780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
160-457
               

               
Cow position:
               
chr25:14075189-14075487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 56
               

               
Conread position:
               
161-393
               

               
Cow position:
               
chr25:13139708-13139928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 80
               

               
Conread position:
               
161-456
               

               
Cow position:
               
chr25:7440920-7441211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
59, 22
               

               
Conread position:
               
165-397
               

               
Cow position:
               
chr25:12252920-12252687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
61, 135
               

               
Conread position:
               
165-459
               

               
Cow position:
               
chr25:24066765-24066483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
225, 45
               

               
Conread position:
               
174-402
               

               
Cow position:
               
chr25:6928607-6928383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
178-407
               

               
Cow position:
               
chr25:26306302-26306070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
179-390
               

               
Cow position:
               
chr25:4947869-4948076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
186-386
               

               
Cow position:
               
chr25:7799466-7799658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
194, 48
               

               
Conread position:
               
186-402
               

               
Cow position:
               
chr25:26051814-26052028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
113, 58
               

               
Conread position:
               
187-402
               

               
Cow position:
               
chr25:23745171-23745387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
124, 67
               

               
Conread position:
               
187-405
               

               
Cow position:
               
chr25:12806958-12807168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
202, 45
               

               
Conread position:
               
187-431
               

               
Cow position:
               
chr25:13621445-13621205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
222, 120
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr25:35762508-35762714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
143, 9
               

               
Conread position:
               
191-405
               

               
Cow position:
               
chr25:40931193-40931403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
192, 32
               

               
Conread position:
               
192-398
               

               
Cow position:
               
chr25:23817921-23817718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
42, 12
               

               
Conread position:
               
196-404
               

               
Cow position:
               
chr25:23504970-23505179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
43, 182
               

               
Conread position:
               
196-405
               

               
Cow position:
               
chr25:36074078-36073872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
196-450
               

               
Cow position:
               
chr25:11823509-11823248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
202, 34
               

               
Conread position:
               
197-392
               

               
Cow position:
               
chr25:6134169-6133974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 58
               

               
Conread position:
               
197-407
               

               
Cow position:
               
chr25:36021247-36021451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
199-387
               

               
Cow position:
               
chr25:7379224-7379036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
202-397
               

               
Cow position:
               
chr25:33555537-33555727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
187, 42
               

               
Conread position:
               
208-405
               

               
Cow position:
               
chr25:1840256-1840452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
208-405
               

               
Cow position:
               
chr25:36019733-36019542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
216-401
               

               
Cow position:
               
chr25:21501109-21500920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
27, 142
               

               
Conread position:
               
217-409
               

               
Cow position:
               
chr25:5637444-5637251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
222-407
               

               
Cow position:
               
chr25:36716865-36717049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 79
               

               
Conread position:
               
223-401
               

               
Cow position:
               
chr25:447318-447138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
224-407
               

               
Cow position:
               
chr25:22298585-22298765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 8
               

               
Conread position:
               
225-407
               

               
Cow position:
               
chr25:26072611-26072430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
12, 77
               

               
Conread position:
               
235-455
               

               
Cow position:
               
chr25:18929233-18929005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
237-397
               

               
Cow position:
               
chr25:36840359-36840517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
237-407
               

               
Cow position:
               
chr25:6258846-6259017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
97, 15
               

               
Conread position:
               
238-404
               

               
Cow position:
               
chr25:22348501-22348332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
238-405
               

               
Cow position:
               
chr25:9939295-9939131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
239-400
               

               
Cow position:
               
chr25:9107560-9107400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
239-407
               

               
Cow position:
               
chr25:18288805-18288637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
141, 58
               

               
Conread position:
               
239-458
               

               
Cow position:
               
chr25:18810307-18810535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
147, 22
               

               
Conread position:
               
239-461
               

               
Cow position:
               
chr25:35109306-35109070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
240-405
               

               
Cow position:
               
chr25:31762645-31762479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
241-381
               

               
Cow position:
               
chr25:24167731-24167592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
5, 59
               

               
Conread position:
               
241-407
               

               
Cow position:
               
chr25:13222865-13223031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
244-404
               

               
Cow position:
               
chr25:9615806-9615964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
244-438
               

               
Cow position:
               
chr25:34788294-34788085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 117
               

               
Conread position:
               
247-403
               

               
Cow position:
               
chr25:4009064-4009221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
247-405
               

               
Cow position:
               
chr25:26160936-26161098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 159
               

               
Conread position:
               
247-461
               

               
Cow position:
               
chr25:10364363-10364147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
139, 111
               

               
Conread position:
               
248-387
               

               
Cow position:
               
chr25:4221631-4221492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
251-405
               

               
Cow position:
               
chr25:3744771-3744616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
254-400
               

               
Cow position:
               
chr25:5920059-5920204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
254-414
               

               
Cow position:
               
chr25:13503411-13503571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
119, 138
               

               
Conread position:
               
255-396
               

               
Cow position:
               
chr25:15218115-15218253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
134, 44
               

               
Conread position:
               
256-426
               

               
Cow position:
               
chr25:17918954-17919123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
257-390
               

               
Cow position:
               
chr25:18541965-18541831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
257-397
               

               
Cow position:
               
chr25:36873352-36873212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
257-404
               

               
Cow position:
               
chr25:15463568-15463716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
123, 114
               

               
Conread position:
               
257-459
               

               
Cow position:
               
chr25:18448794-18448997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
141, 97
               

               
Conread position:
               
258-405
               

               
Cow position:
               
chr25:30625101-30624953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
261-406
               

               
Cow position:
               
chr25:28668066-28667915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
261-459
               

               
Cow position:
               
chr25:2111034-2111241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
129, 38
               

               
Conread position:
               
262-387
               

               
Cow position:
               
chr25:30064927-30064802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
262-450
               

               
Cow position:
               
chr25:21208982-21208809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
263-397
               

               
Cow position:
               
chr25:9574143-9574012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
126, 50
               

               
Conread position:
               
263-404
               

               
Cow position:
               
chr25:15695253-15695392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
126, 21
               

               
Conread position:
               
263-409
               

               
Cow position:
               
chr25:36873069-36872920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
264-458
               

               
Cow position:
               
chr25:20202901-20203112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
269-400
               

               
Cow position:
               
chr25:8347645-8347777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr25:23998931-23998745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
270-396
               

               
Cow position:
               
chr25:34967515-34967388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
270-458
               

               
Cow position:
               
chr25:15024906-15025093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
134, 25
               

               
Conread position:
               
274-405
               

               
Cow position:
               
chr25:14264954-14265084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
276-457
               

               
Cow position:
               
chr25:36341019-36340836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
131, 68
               

               
Conread position:
               
277-396
               

               
Cow position:
               
chr25:27884407-27884288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
112, 12
               

               
Conread position:
               
302-455
               

               
Cow position:
               
chr25:22519322-22519475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
88, 59
               

               
Conread position:
               
304-407
               

               
Cow position:
               
chr25:6781890-6781993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
85, 100
               

               
Conread position:
               
304-456
               

               
Cow position:
               
chr25:20063302-20063462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               
Show alignments to all cow chromosomes.