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Cow genome map

           
Conread name:
           
Mixn-0029m24
        

               
Conread position:
               
1-349
               

               
Cow position:
               
chr4:1405257-1405608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
154, 41
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr4:21371117-21371556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
125, 46
               

               
Conread position:
               
2-403
               

               
Cow position:
               
chr4:56240125-56239736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 15
               

               
Conread position:
               
2-406
               

               
Cow position:
               
chr4:23509307-23509719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 24
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr4:48499567-48499761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
123, 35
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chr4:55523093-55523291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
149, 45
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr4:62570534-62570762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
92, 45
               

               
Conread position:
               
3-262
               

               
Cow position:
               
chr4:32748914-32749185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
19, 46
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr4:19542515-19542801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
126, 45
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr4:19438177-19438477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
117, 45
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr4:14964492-14964806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
19, 77
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr4:45114887-45114563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
123, 46
               

               
Conread position:
               
3-329
               

               
Cow position:
               
chr4:59106092-59105777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
119, 45
               

               
Conread position:
               
3-347
               

               
Cow position:
               
chr4:54930697-54930356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 45
               

               
Conread position:
               
3-350
               

               
Cow position:
               
chr4:51739984-51739648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 45
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr4:33030280-33030629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
125, 49
               

               
Conread position:
               
3-380
               

               
Cow position:
               
chr4:5999475-5999096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
74, 46
               

               
Conread position:
               
3-388
               

               
Cow position:
               
chr4:36755470-36755848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
117, 24
               

               
Conread position:
               
3-391
               

               
Cow position:
               
chr4:34337543-34337163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 45
               

               
Conread position:
               
3-405
               

               
Cow position:
               
chr4:28772346-28771944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 13
               

               
Conread position:
               
3-405
               

               
Cow position:
               
chr4:44612722-44613128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 44
               

               
Conread position:
               
3-405
               

               
Cow position:
               
chr4:46591381-46591791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 43
               

               
Conread position:
               
3-405
               

               
Cow position:
               
chr4:51783899-51784303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 248
               

               
Conread position:
               
3-405
               

               
Cow position:
               
chr4:63349757-63349368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
25, 78
               

               
Conread position:
               
3-406
               

               
Cow position:
               
chr4:3251817-3251421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 45
               

               
Conread position:
               
3-439
               

               
Cow position:
               
chr4:22115325-22115766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
117, 38
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr4:3836997-3837455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 46
               

               
Conread position:
               
3-456
               

               
Cow position:
               
chr4:24187898-24187423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
105, 19
               

               
Conread position:
               
3-460
               

               
Cow position:
               
chr4:19744608-19745070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 45
               

               
Conread position:
               
3-461
               

               
Cow position:
               
chr4:46456328-46455894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 46
               

               
Conread position:
               
4-229
               

               
Cow position:
               
chr4:57931631-57931864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
116, 36
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr4:67408259-67408536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 38
               

               
Conread position:
               
4-328
               

               
Cow position:
               
chr4:13832882-13832555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
73, 45
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr4:19007764-19008114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
4-429
               

               
Cow position:
               
chr4:41186186-41185773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
4-447
               

               
Cow position:
               
chr4:12697368-12697798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
120, 43
               

               
Conread position:
               
4-447
               

               
Cow position:
               
chr4:45235142-45234703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
4-454
               

               
Cow position:
               
chr4:27529833-27530306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 44
               

               
Conread position:
               
4-460
               

               
Cow position:
               
chr4:2121678-2121217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
5-233
               

               
Cow position:
               
chr4:44073049-44072811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
117, 43
               

               
Conread position:
               
6-241
               

               
Cow position:
               
chr4:27292237-27291993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
91, 42
               

               
Conread position:
               
6-403
               

               
Cow position:
               
chr4:68233701-68234089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
135, 43
               

               
Conread position:
               
6-405
               

               
Cow position:
               
chr4:22073587-22073198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
107, 41
               

               
Conread position:
               
6-426
               

               
Cow position:
               
chr4:23526419-23526842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 42
               

               
Conread position:
               
6-461
               

               
Cow position:
               
chr4:16239415-16238968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
176, 42
               

               
Conread position:
               
7-224
               

               
Cow position:
               
chr4:42267017-42266806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
7-279
               

               
Cow position:
               
chr4:3475353-3475628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
113, 148
               

               
Conread position:
               
7-340
               

               
Cow position:
               
chr4:23554976-23555324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
113, 10
               

               
Conread position:
               
7-407
               

               
Cow position:
               
chr4:21392079-21391686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 9
               

               
Conread position:
               
7-412
               

               
Cow position:
               
chr4:27276818-27276412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 47
               

               
Conread position:
               
7-458
               

               
Cow position:
               
chr4:3440129-3440591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
110, 41
               

               
Conread position:
               
8-277
               

               
Cow position:
               
chr4:10026214-10026480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 12
               

               
Conread position:
               
8-306
               

               
Cow position:
               
chr4:11671176-11671477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
114, 40
               

               
Conread position:
               
8-307
               

               
Cow position:
               
chr4:11201543-11201846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
8-351
               

               
Cow position:
               
chr4:6630567-6630224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
112, 41
               

               
Conread position:
               
8-373
               

               
Cow position:
               
chr4:33395964-33395606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 38
               

               
Conread position:
               
8-384
               

               
Cow position:
               
chr4:20139795-20139414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 39
               

               
Conread position:
               
8-405
               

               
Cow position:
               
chr4:12903542-12903945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 40
               

               
Conread position:
               
8-405
               

               
Cow position:
               
chr4:42480911-42481304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
85, 12
               

               
Conread position:
               
8-407
               

               
Cow position:
               
chr4:34209752-34210164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
110, 9
               

               
Conread position:
               
8-407
               

               
Cow position:
               
chr4:68764243-68764644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
110, 23
               

               
Conread position:
               
8-461
               

               
Cow position:
               
chr4:11021927-11021481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 101
               

               
Conread position:
               
9-218
               

               
Cow position:
               
chr4:56852622-56852843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
111, 39
               

               
Conread position:
               
9-287
               

               
Cow position:
               
chr4:16637873-16637598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
9-288
               

               
Cow position:
               
chr4:22215931-22215646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 40
               

               
Conread position:
               
9-293
               

               
Cow position:
               
chr4:480282-479996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
109, 39
               

               
Conread position:
               
9-293
               

               
Cow position:
               
chr4:21058660-21058364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
92, 38
               

               
Conread position:
               
9-349
               

               
Cow position:
               
chr4:9137002-9137347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
111, 38
               

               
Conread position:
               
9-376
               

               
Cow position:
               
chr4:51898729-51899101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 7
               

               
Conread position:
               
9-402
               

               
Cow position:
               
chr4:48485718-48486114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
38, 155
               

               
Conread position:
               
9-404
               

               
Cow position:
               
chr4:48152644-48152251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 45
               

               
Conread position:
               
9-405
               

               
Cow position:
               
chr4:30974062-30974457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
108, 31
               

               
Conread position:
               
9-405
               

               
Cow position:
               
chr4:62772210-62771796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
111, 247
               

               
Conread position:
               
9-407
               

               
Cow position:
               
chr4:51850920-51851339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 218
               

               
Conread position:
               
9-407
               

               
Cow position:
               
chr4:66173072-66172666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 38
               

               
Conread position:
               
9-409
               

               
Cow position:
               
chr4:33612638-33612235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 40
               

               
Conread position:
               
9-445
               

               
Cow position:
               
chr4:53208026-53208468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 39
               

               
Conread position:
               
9-458
               

               
Cow position:
               
chr4:19313730-19314185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
105, 38
               

               
Conread position:
               
9-460
               

               
Cow position:
               
chr4:19097017-19097465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 38
               

               
Conread position:
               
10-229
               

               
Cow position:
               
chr4:67392696-67392910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
152, 28
               

               
Conread position:
               
10-283
               

               
Cow position:
               
chr4:1915852-1915576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
105, 38
               

               
Conread position:
               
10-287
               

               
Cow position:
               
chr4:61215272-61214989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
100, 38
               

               
Conread position:
               
10-290
               

               
Cow position:
               
chr4:43370124-43369837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 38
               

               
Conread position:
               
10-295
               

               
Cow position:
               
chr4:46274919-46275192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
10-296
               

               
Cow position:
               
chr4:22849984-22849701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
99, 38
               

               
Conread position:
               
10-300
               

               
Cow position:
               
chr4:28377923-28377640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
109, 37
               

               
Conread position:
               
10-310
               

               
Cow position:
               
chr4:53545755-53546056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
61, 38
               

               
Conread position:
               
10-311
               

               
Cow position:
               
chr4:32827396-32827090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
120, 37
               

               
Conread position:
               
10-314
               

               
Cow position:
               
chr4:69343442-69343736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
149, 37
               

               
Conread position:
               
10-331
               

               
Cow position:
               
chr4:19142015-19142326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
106, 37
               

               
Conread position:
               
10-338
               

               
Cow position:
               
chr4:15635717-15635391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
10-338
               

               
Cow position:
               
chr4:19558453-19558778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
113, 37
               

               
Conread position:
               
10-338
               

               
Cow position:
               
chr4:51903328-51903662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-342
               

               
Cow position:
               
chr4:39231797-39231460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-347
               

               
Cow position:
               
chr4:2893750-2894097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
113, 38
               

               
Conread position:
               
10-347
               

               
Cow position:
               
chr4:39455780-39456105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-349
               

               
Cow position:
               
chr4:17833179-17832833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
110, 37
               

               
Conread position:
               
10-349
               

               
Cow position:
               
chr4:43148130-43148479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
10-349
               

               
Cow position:
               
chr4:57584502-57584174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
231, 65
               

               
Conread position:
               
10-361
               

               
Cow position:
               
chr4:17474163-17474519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
10-362
               

               
Cow position:
               
chr4:620426-620054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
110, 16
               

               
Conread position:
               
10-366
               

               
Cow position:
               
chr4:16799466-16799101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
10-371
               

               
Cow position:
               
chr4:21257403-21257034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 38
               

               
Conread position:
               
10-386
               

               
Cow position:
               
chr4:12003949-12004319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 38
               

               
Conread position:
               
10-386
               

               
Cow position:
               
chr4:24002243-24001862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 38
               

               
Conread position:
               
10-388
               

               
Cow position:
               
chr4:7258701-7258328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
139, 38
               

               
Conread position:
               
10-388
               

               
Cow position:
               
chr4:45589857-45589494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 10
               

               
Conread position:
               
10-395
               

               
Cow position:
               
chr4:43866125-43865742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 38
               

               
Conread position:
               
10-396
               

               
Cow position:
               
chr4:51727809-51728194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 117
               

               
Conread position:
               
10-397
               

               
Cow position:
               
chr4:33971171-33970781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 186
               

               
Conread position:
               
10-397
               

               
Cow position:
               
chr4:34208654-34209049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
108, 41
               

               
Conread position:
               
10-397
               

               
Cow position:
               
chr4:37703992-37704380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 37
               

               
Conread position:
               
10-398
               

               
Cow position:
               
chr4:13668890-13668504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
131, 37
               

               
Conread position:
               
10-400
               

               
Cow position:
               
chr4:45644-46024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
10-401
               

               
Cow position:
               
chr4:27540347-27540727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
112, 38
               

               
Conread position:
               
10-402
               

               
Cow position:
               
chr4:3990896-3990516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
83, 42
               

               
Conread position:
               
10-404
               

               
Cow position:
               
chr4:5610344-5609971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
114, 39
               

               
Conread position:
               
10-404
               

               
Cow position:
               
chr4:25889109-25888711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
10-404
               

               
Cow position:
               
chr4:46526725-46527124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
118, 123
               

               
Conread position:
               
10-405
               

               
Cow position:
               
chr4:8947130-8947519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 38
               

               
Conread position:
               
10-405
               

               
Cow position:
               
chr4:18974163-18974545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
87, 37
               

               
Conread position:
               
10-405
               

               
Cow position:
               
chr4:23451370-23450971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-405
               

               
Cow position:
               
chr4:32260121-32259718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 39
               

               
Conread position:
               
10-405
               

               
Cow position:
               
chr4:44839159-44838772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 41
               

               
Conread position:
               
10-405
               

               
Cow position:
               
chr4:45662774-45662386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 38
               

               
Conread position:
               
10-406
               

               
Cow position:
               
chr4:7430045-7430444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 37
               

               
Conread position:
               
10-406
               

               
Cow position:
               
chr4:11872186-11871800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-406
               

               
Cow position:
               
chr4:68076802-68076411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
10-407
               

               
Cow position:
               
chr4:3421372-3421751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
183, 42
               

               
Conread position:
               
10-407
               

               
Cow position:
               
chr4:19434987-19435378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 38
               

               
Conread position:
               
10-407
               

               
Cow position:
               
chr4:37915603-37915211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 27
               

               
Conread position:
               
10-407
               

               
Cow position:
               
chr4:40414905-40414501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 38
               

               
Conread position:
               
10-407
               

               
Cow position:
               
chr4:48961764-48961361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
10-407
               

               
Cow position:
               
chr4:59785042-59785447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 216
               

               
Conread position:
               
10-409
               

               
Cow position:
               
chr4:30574182-30574593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
108, 38
               

               
Conread position:
               
10-414
               

               
Cow position:
               
chr4:45775615-45775206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-425
               

               
Cow position:
               
chr4:11193908-11194328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
10-437
               

               
Cow position:
               
chr4:1060536-1060102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
85, 38
               

               
Conread position:
               
10-445
               

               
Cow position:
               
chr4:65406634-65406210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-447
               

               
Cow position:
               
chr4:21064765-21065212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 37
               

               
Conread position:
               
10-451
               

               
Cow position:
               
chr4:54937612-54938071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
108, 38
               

               
Conread position:
               
10-455
               

               
Cow position:
               
chr4:22528661-22528211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
110, 37
               

               
Conread position:
               
10-457
               

               
Cow position:
               
chr4:24372125-24371688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-459
               

               
Cow position:
               
chr4:12591485-12591021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
10-461
               

               
Cow position:
               
chr4:20327989-20327522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 38
               

               
Conread position:
               
10-461
               

               
Cow position:
               
chr4:37553318-37552865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
121, 38
               

               
Conread position:
               
11-293
               

               
Cow position:
               
chr4:11901836-11901549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
109, 37
               

               
Conread position:
               
11-311
               

               
Cow position:
               
chr4:19497523-19497233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
86, 37
               

               
Conread position:
               
11-323
               

               
Cow position:
               
chr4:60371108-60370784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
37, 172
               

               
Conread position:
               
11-345
               

               
Cow position:
               
chr4:14470841-14470506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 41
               

               
Conread position:
               
11-395
               

               
Cow position:
               
chr4:19582889-19582503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 91
               

               
Conread position:
               
11-402
               

               
Cow position:
               
chr4:10055938-10056326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
101, 37
               

               
Conread position:
               
11-406
               

               
Cow position:
               
chr4:38999154-38999551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
11-407
               

               
Cow position:
               
chr4:22010331-22009934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 15
               

               
Conread position:
               
11-407
               

               
Cow position:
               
chr4:62471795-62472206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 37
               

               
Conread position:
               
11-407
               

               
Cow position:
               
chr4:68387519-68387915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 36
               

               
Conread position:
               
11-421
               

               
Cow position:
               
chr4:9815625-9815206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 43
               

               
Conread position:
               
11-426
               

               
Cow position:
               
chr4:22138509-22138078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 37
               

               
Conread position:
               
11-434
               

               
Cow position:
               
chr4:242953-243387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
103, 39
               

               
Conread position:
               
11-439
               

               
Cow position:
               
chr4:5797694-5798125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
37, 158
               

               
Conread position:
               
11-445
               

               
Cow position:
               
chr4:19306983-19307421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
105, 28
               

               
Conread position:
               
11-457
               

               
Cow position:
               
chr4:25369843-25370291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 37
               

               
Conread position:
               
11-461
               

               
Cow position:
               
chr4:23494660-23495091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
109, 41
               

               
Conread position:
               
12-179
               

               
Cow position:
               
chr4:22072945-22072769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
110, 36
               

               
Conread position:
               
12-221
               

               
Cow position:
               
chr4:26163242-26163030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
85, 36
               

               
Conread position:
               
12-224
               

               
Cow position:
               
chr4:33421633-33421413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
83, 35
               

               
Conread position:
               
12-247
               

               
Cow position:
               
chr4:38309405-38309175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 151
               

               
Conread position:
               
12-308
               

               
Cow position:
               
chr4:53208967-53209264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
108, 35
               

               
Conread position:
               
12-334
               

               
Cow position:
               
chr4:29237422-29237115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
106, 36
               

               
Conread position:
               
12-387
               

               
Cow position:
               
chr4:14927692-14928065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 80
               

               
Conread position:
               
12-387
               

               
Cow position:
               
chr4:46477211-46476840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 36
               

               
Conread position:
               
12-389
               

               
Cow position:
               
chr4:27755579-27755196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 247
               

               
Conread position:
               
12-400
               

               
Cow position:
               
chr4:4321278-4320871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
12-400
               

               
Cow position:
               
chr4:33433530-33433138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 35
               

               
Conread position:
               
12-405
               

               
Cow position:
               
chr4:18095948-18095550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
106, 39
               

               
Conread position:
               
12-426
               

               
Cow position:
               
chr4:46060674-46061087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
106, 36
               

               
Conread position:
               
12-452
               

               
Cow position:
               
chr4:56570533-56570983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 38
               

               
Conread position:
               
12-456
               

               
Cow position:
               
chr4:27997412-27997872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
16, 37
               

               
Conread position:
               
12-458
               

               
Cow position:
               
chr4:12048973-12049422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 37
               

               
Conread position:
               
12-459
               

               
Cow position:
               
chr4:10992472-10992020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
12-460
               

               
Cow position:
               
chr4:37935553-37935101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
12-461
               

               
Cow position:
               
chr4:4084718-4084255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 37
               

               
Conread position:
               
13-230
               

               
Cow position:
               
chr4:69305385-69305602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
107, 41
               

               
Conread position:
               
13-349
               

               
Cow position:
               
chr4:9845649-9845981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
13-405
               

               
Cow position:
               
chr4:7704578-7704201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
105, 35
               

               
Conread position:
               
13-456
               

               
Cow position:
               
chr4:45918760-45919211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
84, 34
               

               
Conread position:
               
14-200
               

               
Cow position:
               
chr4:24432377-24432564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
111, 36
               

               
Conread position:
               
14-387
               

               
Cow position:
               
chr4:49159050-49158689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
88, 34
               

               
Conread position:
               
15-402
               

               
Cow position:
               
chr4:19699830-19700217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 145
               

               
Conread position:
               
15-404
               

               
Cow position:
               
chr4:23847320-23846928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 33
               

               
Conread position:
               
15-404
               

               
Cow position:
               
chr4:34630633-34631021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 32
               

               
Conread position:
               
15-407
               

               
Cow position:
               
chr4:657088-656682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
107, 233
               

               
Conread position:
               
17-198
               

               
Cow position:
               
chr4:69406101-69406291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
103, 31
               

               
Conread position:
               
17-397
               

               
Cow position:
               
chr4:26400690-26401071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 30
               

               
Conread position:
               
17-398
               

               
Cow position:
               
chr4:22101534-22101147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
98, 34
               

               
Conread position:
               
17-405
               

               
Cow position:
               
chr4:65650392-65650010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
103, 31
               

               
Conread position:
               
17-425
               

               
Cow position:
               
chr4:45644580-45644174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 212
               

               
Conread position:
               
17-443
               

               
Cow position:
               
chr4:52225742-52226168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
103, 31
               

               
Conread position:
               
17-446
               

               
Cow position:
               
chr4:8801236-8801675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 121
               

               
Conread position:
               
17-458
               

               
Cow position:
               
chr4:2141479-2141907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 30
               

               
Conread position:
               
18-198
               

               
Cow position:
               
chr4:56514205-56514016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
104, 30
               

               
Conread position:
               
18-208
               

               
Cow position:
               
chr4:11090952-11090764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
111, 29
               

               
Conread position:
               
18-212
               

               
Cow position:
               
chr4:7249835-7249635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
18-223
               

               
Cow position:
               
chr4:54667957-54667743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
18-226
               

               
Cow position:
               
chr4:2244254-2244038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
31, 60
               

               
Conread position:
               
18-232
               

               
Cow position:
               
chr4:61391467-61391251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
110, 27
               

               
Conread position:
               
18-287
               

               
Cow position:
               
chr4:54501715-54501428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
104, 30
               

               
Conread position:
               
18-287
               

               
Cow position:
               
chr4:56233425-56233688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
102, 29
               

               
Conread position:
               
18-293
               

               
Cow position:
               
chr4:13877928-13878193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
18-303
               

               
Cow position:
               
chr4:30690458-30690737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
112, 30
               

               
Conread position:
               
18-320
               

               
Cow position:
               
chr4:20299003-20299314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 139
               

               
Conread position:
               
18-322
               

               
Cow position:
               
chr4:285389-285683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
109, 30
               

               
Conread position:
               
18-333
               

               
Cow position:
               
chr4:58261419-58261098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
115, 21
               

               
Conread position:
               
18-347
               

               
Cow position:
               
chr4:42672905-42673242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
18-347
               

               
Cow position:
               
chr4:68362673-68362987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
29, 108
               

               
Conread position:
               
18-348
               

               
Cow position:
               
chr4:54468562-54468236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
102, 153
               

               
Conread position:
               
18-357
               

               
Cow position:
               
chr4:24744679-24744330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 30
               

               
Conread position:
               
18-357
               

               
Cow position:
               
chr4:47773898-47773566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
95, 20
               

               
Conread position:
               
18-386
               

               
Cow position:
               
chr4:5461119-5460757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 42
               

               
Conread position:
               
18-387
               

               
Cow position:
               
chr4:37342851-37343228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
18-388
               

               
Cow position:
               
chr4:13589825-13590190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
32, 44
               

               
Conread position:
               
18-393
               

               
Cow position:
               
chr4:3850287-3850662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 29
               

               
Conread position:
               
18-393
               

               
Cow position:
               
chr4:22842082-22842455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 39
               

               
Conread position:
               
18-393
               

               
Cow position:
               
chr4:64039838-64040227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 103
               

               
Conread position:
               
18-396
               

               
Cow position:
               
chr4:36730924-36731306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
18-397
               

               
Cow position:
               
chr4:39128263-39128654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 30
               

               
Conread position:
               
18-400
               

               
Cow position:
               
chr4:17052864-17052475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
104, 30
               

               
Conread position:
               
18-401
               

               
Cow position:
               
chr4:3687662-3688048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 31
               

               
Conread position:
               
18-403
               

               
Cow position:
               
chr4:203414-203022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 238
               

               
Conread position:
               
18-404
               

               
Cow position:
               
chr4:4185852-4186242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
25, 15
               

               
Conread position:
               
18-404
               

               
Cow position:
               
chr4:46550118-46550508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 30
               

               
Conread position:
               
18-405
               

               
Cow position:
               
chr4:8413376-8412997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
106, 30
               

               
Conread position:
               
18-407
               

               
Cow position:
               
chr4:4085402-4084982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
18-407
               

               
Cow position:
               
chr4:10731953-10732347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
18-407
               

               
Cow position:
               
chr4:31136489-31136881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
18-441
               

               
Cow position:
               
chr4:570534-570951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
18-447
               

               
Cow position:
               
chr4:10412113-10412538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 29
               

               
Conread position:
               
18-447
               

               
Cow position:
               
chr4:58707449-58707006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 34
               

               
Conread position:
               
18-452
               

               
Cow position:
               
chr4:53134345-53134789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
91, 30
               

               
Conread position:
               
18-459
               

               
Cow position:
               
chr4:44496118-44496560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 31
               

               
Conread position:
               
18-460
               

               
Cow position:
               
chr4:60897539-60897094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 31
               

               
Conread position:
               
18-461
               

               
Cow position:
               
chr4:23599904-23600355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
19-286
               

               
Cow position:
               
chr4:26746219-26746488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
101, 32
               

               
Conread position:
               
19-300
               

               
Cow position:
               
chr4:52017115-52016837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
143, 28
               

               
Conread position:
               
19-303
               

               
Cow position:
               
chr4:27561131-27561419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
101, 29
               

               
Conread position:
               
19-347
               

               
Cow position:
               
chr4:7763-7433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
107, 29
               

               
Conread position:
               
19-347
               

               
Cow position:
               
chr4:27664740-27665079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
99, 29
               

               
Conread position:
               
19-359
               

               
Cow position:
               
chr4:66112342-66111993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
19-405
               

               
Cow position:
               
chr4:15904833-15905225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 30
               

               
Conread position:
               
19-406
               

               
Cow position:
               
chr4:52748723-52748333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 29
               

               
Conread position:
               
19-455
               

               
Cow position:
               
chr4:35981724-35982169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 29
               

               
Conread position:
               
19-459
               

               
Cow position:
               
chr4:46597118-46597553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 30
               

               
Conread position:
               
19-461
               

               
Cow position:
               
chr4:14505265-14504847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
232, 29
               

               
Conread position:
               
20-312
               

               
Cow position:
               
chr4:6792178-6792469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
91, 27
               

               
Conread position:
               
20-397
               

               
Cow position:
               
chr4:49629233-49629596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 28
               

               
Conread position:
               
20-405
               

               
Cow position:
               
chr4:58248144-58248524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 27
               

               
Conread position:
               
21-402
               

               
Cow position:
               
chr4:21874568-21874924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
366, 14
               

               
Conread position:
               
21-452
               

               
Cow position:
               
chr4:23311526-23311096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
107, 31
               

               
Conread position:
               
22-320
               

               
Cow position:
               
chr4:7501621-7501908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
22-386
               

               
Cow position:
               
chr4:20661-21017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
84, 25
               

               
Conread position:
               
23-296
               

               
Cow position:
               
chr4:52167103-52166836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
95, 5
               

               
Conread position:
               
23-382
               

               
Cow position:
               
chr4:3283710-3283346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 26
               

               
Conread position:
               
23-405
               

               
Cow position:
               
chr4:62983814-62983437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
95, 24
               

               
Conread position:
               
24-404
               

               
Cow position:
               
chr4:23445311-23444924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 23
               

               
Conread position:
               
24-404
               

               
Cow position:
               
chr4:43909492-43909885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
85, 25
               

               
Conread position:
               
25-229
               

               
Cow position:
               
chr4:12260041-12259830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
68, 171
               

               
Conread position:
               
25-307
               

               
Cow position:
               
chr4:14919740-14920019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
102, 6
               

               
Conread position:
               
25-311
               

               
Cow position:
               
chr4:38181422-38181714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
99, 155
               

               
Conread position:
               
25-457
               

               
Cow position:
               
chr4:49794420-49794847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 23
               

               
Conread position:
               
26-204
               

               
Cow position:
               
chr4:2536575-2536757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
26-209
               

               
Cow position:
               
chr4:56409925-56410118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
96, 21
               

               
Conread position:
               
26-211
               

               
Cow position:
               
chr4:10471965-10472157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
98, 22
               

               
Conread position:
               
26-222
               

               
Cow position:
               
chr4:21064262-21064061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
26-264
               

               
Cow position:
               
chr4:53763377-53763136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
94, 158
               

               
Conread position:
               
26-271
               

               
Cow position:
               
chr4:1237374-1237124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
88, 22
               

               
Conread position:
               
26-283
               

               
Cow position:
               
chr4:561143-561403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
86, 21
               

               
Conread position:
               
26-283
               

               
Cow position:
               
chr4:23060262-23059994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
94, 131
               

               
Conread position:
               
26-283
               

               
Cow position:
               
chr4:43495644-43495899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
26-298
               

               
Cow position:
               
chr4:2422324-2422593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
115, 22
               

               
Conread position:
               
26-300
               

               
Cow position:
               
chr4:47289812-47290097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
26-311
               

               
Cow position:
               
chr4:24458355-24458073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
102, 24
               

               
Conread position:
               
26-331
               

               
Cow position:
               
chr4:123459-123160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
26-340
               

               
Cow position:
               
chr4:19265315-19265632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 21
               

               
Conread position:
               
26-340
               

               
Cow position:
               
chr4:51866736-51867051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
66, 138
               

               
Conread position:
               
26-346
               

               
Cow position:
               
chr4:15439338-15439641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
26-348
               

               
Cow position:
               
chr4:25806641-25806966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
87, 22
               

               
Conread position:
               
26-350
               

               
Cow position:
               
chr4:23853946-23854249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
75, 22
               

               
Conread position:
               
26-354
               

               
Cow position:
               
chr4:35940269-35939933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
94, 21
               

               
Conread position:
               
26-358
               

               
Cow position:
               
chr4:22741650-22741339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
311, 22
               

               
Conread position:
               
26-373
               

               
Cow position:
               
chr4:17112135-17111782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 28
               

               
Conread position:
               
26-375
               

               
Cow position:
               
chr4:55395510-55395855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 22
               

               
Conread position:
               
26-378
               

               
Cow position:
               
chr4:37691566-37691215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
87, 22
               

               
Conread position:
               
26-378
               

               
Cow position:
               
chr4:66256427-66256783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
17, 226
               

               
Conread position:
               
26-387
               

               
Cow position:
               
chr4:41867186-41867541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
26-388
               

               
Cow position:
               
chr4:10378840-10379218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 227
               

               
Conread position:
               
26-389
               

               
Cow position:
               
chr4:28399665-28399305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
304, 22
               

               
Conread position:
               
26-397
               

               
Cow position:
               
chr4:41301249-41300881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
26-400
               

               
Cow position:
               
chr4:33097220-33096863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
26-400
               

               
Cow position:
               
chr4:47348574-47348944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 22
               

               
Conread position:
               
26-401
               

               
Cow position:
               
chr4:65179389-65179030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
95, 22
               

               
Conread position:
               
26-404
               

               
Cow position:
               
chr4:395692-396055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
138, 22
               

               
Conread position:
               
26-404
               

               
Cow position:
               
chr4:53100548-53100922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
26-405
               

               
Cow position:
               
chr4:509156-508785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 22
               

               
Conread position:
               
26-405
               

               
Cow position:
               
chr4:3340693-3341076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
26-405
               

               
Cow position:
               
chr4:19541868-19542257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
96, 23
               

               
Conread position:
               
26-405
               

               
Cow position:
               
chr4:19584446-19584826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
26-405
               

               
Cow position:
               
chr4:34641987-34641602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 22
               

               
Conread position:
               
26-405
               

               
Cow position:
               
chr4:44782116-44782499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
26-405
               

               
Cow position:
               
chr4:54190842-54191214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 23
               

               
Conread position:
               
26-405
               

               
Cow position:
               
chr4:65919360-65919733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 13
               

               
Conread position:
               
26-406
               

               
Cow position:
               
chr4:36841019-36841389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
24, 232
               

               
Conread position:
               
26-407
               

               
Cow position:
               
chr4:1985391-1985778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
58, 22
               

               
Conread position:
               
26-407
               

               
Cow position:
               
chr4:31004662-31004284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
26-407
               

               
Cow position:
               
chr4:34310713-34310334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
26-407
               

               
Cow position:
               
chr4:42424059-42423678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 21
               

               
Conread position:
               
26-407
               

               
Cow position:
               
chr4:47730604-47730991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 22
               

               
Conread position:
               
26-432
               

               
Cow position:
               
chr4:36893095-36893513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 25
               

               
Conread position:
               
26-435
               

               
Cow position:
               
chr4:65116469-65116037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
91, 20
               

               
Conread position:
               
26-439
               

               
Cow position:
               
chr4:17124549-17124130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 101
               

               
Conread position:
               
26-451
               

               
Cow position:
               
chr4:10968643-10968206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
75, 22
               

               
Conread position:
               
26-453
               

               
Cow position:
               
chr4:66548011-66547599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
413, 22
               

               
Conread position:
               
26-454
               

               
Cow position:
               
chr4:22249701-22249274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
94, 27
               

               
Conread position:
               
26-454
               

               
Cow position:
               
chr4:25972641-25973074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
77, 23
               

               
Conread position:
               
26-458
               

               
Cow position:
               
chr4:17379076-17378666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
200, 23
               

               
Conread position:
               
26-458
               

               
Cow position:
               
chr4:23647101-23646674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
26-459
               

               
Cow position:
               
chr4:63096333-63095898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 22
               

               
Conread position:
               
26-460
               

               
Cow position:
               
chr4:961921-961466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
26-461
               

               
Cow position:
               
chr4:2609980-2610403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
97, 23
               

               
Conread position:
               
27-225
               

               
Cow position:
               
chr4:51408222-51408026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 149
               

               
Conread position:
               
27-244
               

               
Cow position:
               
chr4:57555709-57555937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
27-293
               

               
Cow position:
               
chr4:33357674-33357948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
95, 21
               

               
Conread position:
               
27-313
               

               
Cow position:
               
chr4:49424581-49424857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
99, 21
               

               
Conread position:
               
27-349
               

               
Cow position:
               
chr4:50203490-50203821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
95, 21
               

               
Conread position:
               
27-352
               

               
Cow position:
               
chr4:26307757-26307418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
27-371
               

               
Cow position:
               
chr4:16602308-16601973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 20
               

               
Conread position:
               
27-371
               

               
Cow position:
               
chr4:59008626-59008265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
93, 20
               

               
Conread position:
               
27-388
               

               
Cow position:
               
chr4:36813115-36813484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
27-391
               

               
Cow position:
               
chr4:25983970-25984330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 160
               

               
Conread position:
               
27-393
               

               
Cow position:
               
chr4:16736246-16736628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
27-397
               

               
Cow position:
               
chr4:25879139-25879507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 24
               

               
Conread position:
               
27-403
               

               
Cow position:
               
chr4:45583385-45583000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
27-405
               

               
Cow position:
               
chr4:45367479-45367864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 25
               

               
Conread position:
               
27-409
               

               
Cow position:
               
chr4:19316254-19315878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
27-451
               

               
Cow position:
               
chr4:31348451-31348009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
27-456
               

               
Cow position:
               
chr4:19597570-19597136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 20
               

               
Conread position:
               
27-460
               

               
Cow position:
               
chr4:54146732-54146294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
28-340
               

               
Cow position:
               
chr4:10905715-10905406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
87, 20
               

               
Conread position:
               
28-381
               

               
Cow position:
               
chr4:42922102-42921760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
28-395
               

               
Cow position:
               
chr4:38952303-38952666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
28-406
               

               
Cow position:
               
chr4:63965247-63964865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
28-457
               

               
Cow position:
               
chr4:40823371-40822933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
96, 20
               

               
Conread position:
               
28-459
               

               
Cow position:
               
chr4:18439829-18439396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
82, 20
               

               
Conread position:
               
29-202
               

               
Cow position:
               
chr4:40410375-40410194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
30-188
               

               
Cow position:
               
chr4:41292234-41292066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
30-215
               

               
Cow position:
               
chr4:26549209-26549397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
99, 18
               

               
Conread position:
               
30-287
               

               
Cow position:
               
chr4:27511017-27511271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
87, 18
               

               
Conread position:
               
30-293
               

               
Cow position:
               
chr4:52632224-52631952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 18
               

               
Conread position:
               
30-331
               

               
Cow position:
               
chr4:64072607-64072305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
30-400
               

               
Cow position:
               
chr4:49089540-49089904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 19
               

               
Conread position:
               
30-403
               

               
Cow position:
               
chr4:7571155-7571535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
30-405
               

               
Cow position:
               
chr4:65815946-65815583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
97, 18
               

               
Conread position:
               
30-412
               

               
Cow position:
               
chr4:13327212-13326824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
90, 18
               

               
Conread position:
               
30-445
               

               
Cow position:
               
chr4:20157667-20157247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 105
               

               
Conread position:
               
30-447
               

               
Cow position:
               
chr4:53125885-53126284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
361, 22
               

               
Conread position:
               
30-457
               

               
Cow position:
               
chr4:35869961-35870382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
100, 18
               

               
Conread position:
               
30-459
               

               
Cow position:
               
chr4:12676559-12676994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 17
               

               
Conread position:
               
30-459
               

               
Cow position:
               
chr4:22236729-22236307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
67, 75
               

               
Conread position:
               
31-283
               

               
Cow position:
               
chr4:19561441-19561682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
31-308
               

               
Cow position:
               
chr4:24119163-24118880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
89, 196
               

               
Conread position:
               
32-283
               

               
Cow position:
               
chr4:18577029-18576768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 123
               

               
Conread position:
               
32-461
               

               
Cow position:
               
chr4:14414598-14414152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
33-404
               

               
Cow position:
               
chr4:7808327-7808695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
14, 155
               

               
Conread position:
               
33-412
               

               
Cow position:
               
chr4:1495651-1495278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
34-405
               

               
Cow position:
               
chr4:37502568-37502936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
6, 217
               

               
Conread position:
               
35-302
               

               
Cow position:
               
chr4:44025067-44024798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
83, 13
               

               
Conread position:
               
35-354
               

               
Cow position:
               
chr4:21233121-21232801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 225
               

               
Conread position:
               
35-405
               

               
Cow position:
               
chr4:19322328-19321953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 13
               

               
Conread position:
               
35-407
               

               
Cow position:
               
chr4:11099918-11099531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
35-461
               

               
Cow position:
               
chr4:12560787-12561220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 6
               

               
Conread position:
               
39-405
               

               
Cow position:
               
chr4:64192417-64192063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
134, 50
               

               
Conread position:
               
40-296
               

               
Cow position:
               
chr4:65538653-65538402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
122, 83
               

               
Conread position:
               
40-461
               

               
Cow position:
               
chr4:13406461-13406876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
78, 118
               

               
Conread position:
               
41-259
               

               
Cow position:
               
chr4:16091644-16091421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
79, 165
               

               
Conread position:
               
41-277
               

               
Cow position:
               
chr4:65891747-65891988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
67, 183
               

               
Conread position:
               
41-408
               

               
Cow position:
               
chr4:12127887-12127511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 193
               

               
Conread position:
               
42-282
               

               
Cow position:
               
chr4:53447909-53447651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
78, 154
               

               
Conread position:
               
42-288
               

               
Cow position:
               
chr4:46370567-46370832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
42-300
               

               
Cow position:
               
chr4:5984288-5984027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
75, 166
               

               
Conread position:
               
42-385
               

               
Cow position:
               
chr4:31023198-31023548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 221
               

               
Conread position:
               
42-404
               

               
Cow position:
               
chr4:21531884-21531520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 45
               

               
Conread position:
               
42-404
               

               
Cow position:
               
chr4:43895048-43894693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
84, 202
               

               
Conread position:
               
42-405
               

               
Cow position:
               
chr4:11897542-11897183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
91, 221
               

               
Conread position:
               
42-405
               

               
Cow position:
               
chr4:34383580-34383219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 76
               

               
Conread position:
               
42-405
               

               
Cow position:
               
chr4:54455587-54455223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 221
               

               
Conread position:
               
42-455
               

               
Cow position:
               
chr4:61897782-61897357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 204
               

               
Conread position:
               
42-461
               

               
Cow position:
               
chr4:29291279-29291707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 56
               

               
Conread position:
               
43-287
               

               
Cow position:
               
chr4:48137667-48137918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
75, 210
               

               
Conread position:
               
43-325
               

               
Cow position:
               
chr4:37620130-37619843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
80, 210
               

               
Conread position:
               
43-334
               

               
Cow position:
               
chr4:44956432-44956129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
43-349
               

               
Cow position:
               
chr4:13043028-13043331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
80, 137
               

               
Conread position:
               
43-366
               

               
Cow position:
               
chr4:65431903-65432235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
77, 48
               

               
Conread position:
               
43-405
               

               
Cow position:
               
chr4:58881209-58880837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 205
               

               
Conread position:
               
43-409
               

               
Cow position:
               
chr4:13255853-13256204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
58, 11
               

               
Conread position:
               
43-453
               

               
Cow position:
               
chr4:59871251-59871645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
343, 64
               

               
Conread position:
               
44-226
               

               
Cow position:
               
chr4:11004957-11004772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 10
               

               
Conread position:
               
44-288
               

               
Cow position:
               
chr4:52497816-52497590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
116, 80
               

               
Conread position:
               
44-360
               

               
Cow position:
               
chr4:65842003-65841687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
44-387
               

               
Cow position:
               
chr4:29805604-29805268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
84, 50
               

               
Conread position:
               
44-388
               

               
Cow position:
               
chr4:63459457-63459116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
76, 198
               

               
Conread position:
               
44-404
               

               
Cow position:
               
chr4:32725981-32726347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 211
               

               
Conread position:
               
44-405
               

               
Cow position:
               
chr4:28836285-28836657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
76, 174
               

               
Conread position:
               
44-407
               

               
Cow position:
               
chr4:26659064-26659427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 43
               

               
Conread position:
               
44-457
               

               
Cow position:
               
chr4:21073390-21072976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 28
               

               
Conread position:
               
45-311
               

               
Cow position:
               
chr4:20502414-20502668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
106, 60
               

               
Conread position:
               
46-402
               

               
Cow position:
               
chr4:6653496-6653842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
72, 31
               

               
Conread position:
               
46-405
               

               
Cow position:
               
chr4:10916080-10915712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 8
               

               
Conread position:
               
46-437
               

               
Cow position:
               
chr4:22724884-22725247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
180, 34
               

               
Conread position:
               
47-440
               

               
Cow position:
               
chr4:34166213-34165806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
73, 104
               

               
Conread position:
               
47-461
               

               
Cow position:
               
chr4:21258979-21259406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
73, 5
               

               
Conread position:
               
48-223
               

               
Cow position:
               
chr4:43295929-43295749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
48-227
               

               
Cow position:
               
chr4:23911826-23911634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 32
               

               
Conread position:
               
48-456
               

               
Cow position:
               
chr4:25356543-25356134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
74, 112
               

               
Conread position:
               
49-261
               

               
Cow position:
               
chr4:39009729-39009953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
71, 177
               

               
Conread position:
               
49-279
               

               
Cow position:
               
chr4:53832809-53833044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
71, 45
               

               
Conread position:
               
49-281
               

               
Cow position:
               
chr4:53999743-53999510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
71, 208
               

               
Conread position:
               
49-404
               

               
Cow position:
               
chr4:26323497-26323864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
71, 38
               

               
Conread position:
               
50-315
               

               
Cow position:
               
chr4:19463255-19463530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
22, 199
               

               
Conread position:
               
51-280
               

               
Cow position:
               
chr4:41908026-41907802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 170
               

               
Conread position:
               
51-405
               

               
Cow position:
               
chr4:2601995-2602355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 207
               

               
Conread position:
               
54-387
               

               
Cow position:
               
chr4:4319382-4319045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
23, 179
               

               
Conread position:
               
54-387
               

               
Cow position:
               
chr4:8704753-8705100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
54-388
               

               
Cow position:
               
chr4:37344664-37344322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
68, 123
               

               
Conread position:
               
54-405
               

               
Cow position:
               
chr4:46501123-46501494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 169
               

               
Conread position:
               
54-409
               

               
Cow position:
               
chr4:13693909-13693547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 194
               

               
Conread position:
               
54-428
               

               
Cow position:
               
chr4:3388313-3388688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
66, 182
               

               
Conread position:
               
55-387
               

               
Cow position:
               
chr4:13222406-13222081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
65, 85
               

               
Conread position:
               
55-461
               

               
Cow position:
               
chr4:41602618-41603025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 155
               

               
Conread position:
               
56-451
               

               
Cow position:
               
chr4:22860935-22860536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 110
               

               
Conread position:
               
57-226
               

               
Cow position:
               
chr4:44902215-44902384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
57-405
               

               
Cow position:
               
chr4:56590802-56591162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 189
               

               
Conread position:
               
59-451
               

               
Cow position:
               
chr4:36945418-36945021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
65, 94
               

               
Conread position:
               
61-350
               

               
Cow position:
               
chr4:44973418-44973703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
66, 181
               

               
Conread position:
               
62-293
               

               
Cow position:
               
chr4:27687700-27687939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
63-401
               

               
Cow position:
               
chr4:16762954-16762605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
59, 128
               

               
Conread position:
               
66-447
               

               
Cow position:
               
chr4:46058970-46058614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
54, 172
               

               
Conread position:
               
71-287
               

               
Cow position:
               
chr4:36724828-36725047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
47, 186
               

               
Conread position:
               
72-421
               

               
Cow position:
               
chr4:31506243-31505884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
73-422
               

               
Cow position:
               
chr4:13974182-13973830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
47, 5
               

               
Conread position:
               
76-403
               

               
Cow position:
               
chr4:16593873-16594203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 92
               

               
Conread position:
               
76-407
               

               
Cow position:
               
chr4:24810652-24810326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
46, 165
               

               
Conread position:
               
76-414
               

               
Cow position:
               
chr4:48321819-48322170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
42, 135
               

               
Conread position:
               
76-416
               

               
Cow position:
               
chr4:13941249-13941590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
14, 121
               

               
Conread position:
               
76-459
               

               
Cow position:
               
chr4:29384428-29384042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
44, 137
               

               
Conread position:
               
78-400
               

               
Cow position:
               
chr4:51768905-51769222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
42, 104
               

               
Conread position:
               
78-407
               

               
Cow position:
               
chr4:38944472-38944131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 183
               

               
Conread position:
               
79-407
               

               
Cow position:
               
chr4:38935152-38935488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 282
               

               
Conread position:
               
79-461
               

               
Cow position:
               
chr4:275265-275645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
258, 48
               

               
Conread position:
               
86-323
               

               
Cow position:
               
chr4:21517202-21516961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 7
               

               
Conread position:
               
86-378
               

               
Cow position:
               
chr4:27344870-27344582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
86-396
               

               
Cow position:
               
chr4:11496830-11496535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 130
               

               
Conread position:
               
93-404
               

               
Cow position:
               
chr4:45685285-45685581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
21, 31
               

               
Conread position:
               
96-403
               

               
Cow position:
               
chr4:11272281-11271972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 11
               

               
Conread position:
               
98-363
               

               
Cow position:
               
chr4:45711191-45711444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
99-400
               

               
Cow position:
               
chr4:43515541-43515834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
100-451
               

               
Cow position:
               
chr4:48143645-48143998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
13, 270
               

               
Conread position:
               
102-453
               

               
Cow position:
               
chr4:17774535-17774172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 148
               

               
Conread position:
               
103-451
               

               
Cow position:
               
chr4:54111569-54111914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 47
               

               
Conread position:
               
107-347
               

               
Cow position:
               
chr4:44676018-44676259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 96
               

               
Conread position:
               
107-408
               

               
Cow position:
               
chr4:45077247-45076951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
13, 85
               

               
Conread position:
               
107-451
               

               
Cow position:
               
chr4:50769942-50769594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
19, 127
               

               
Conread position:
               
108-347
               

               
Cow position:
               
chr4:46393261-46393503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
108-358
               

               
Cow position:
               
chr4:46552489-46552261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
108-405
               

               
Cow position:
               
chr4:20147018-20147306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
108-455
               

               
Cow position:
               
chr4:9681130-9681485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 37
               

               
Conread position:
               
111-347
               

               
Cow position:
               
chr4:40918117-40918362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
111-405
               

               
Cow position:
               
chr4:9925799-9925506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
41, 113
               

               
Conread position:
               
111-407
               

               
Cow position:
               
chr4:17186517-17186222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 7
               

               
Conread position:
               
111-456
               

               
Cow position:
               
chr4:55508404-55508065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
279, 23
               

               
Conread position:
               
112-349
               

               
Cow position:
               
chr4:29106736-29106975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 121
               

               
Conread position:
               
116-308
               

               
Cow position:
               
chr4:46720327-46720140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 116
               

               
Conread position:
               
116-322
               

               
Cow position:
               
chr4:3689545-3689745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 66
               

               
Conread position:
               
116-353
               

               
Cow position:
               
chr4:11331929-11332169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 136
               

               
Conread position:
               
116-389
               

               
Cow position:
               
chr4:59277639-59277372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
11, 94
               

               
Conread position:
               
116-397
               

               
Cow position:
               
chr4:61148430-61148730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
11, 287
               

               
Conread position:
               
116-404
               

               
Cow position:
               
chr4:34210994-34211291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 148
               

               
Conread position:
               
116-404
               

               
Cow position:
               
chr4:54479067-54478798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
116-418
               

               
Cow position:
               
chr4:1026388-1026098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 77
               

               
Conread position:
               
116-456
               

               
Cow position:
               
chr4:39767186-39767527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
13, 186
               

               
Conread position:
               
116-458
               

               
Cow position:
               
chr4:27632286-27632639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
116-461
               

               
Cow position:
               
chr4:28839462-28839811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
11, 118
               

               
Conread position:
               
116-461
               

               
Cow position:
               
chr4:36929154-36929493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
11, 116
               

               
Conread position:
               
117-405
               

               
Cow position:
               
chr4:59377753-59378034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 91
               

               
Conread position:
               
118-334
               

               
Cow position:
               
chr4:38705935-38705720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
43, 179
               

               
Conread position:
               
119-347
               

               
Cow position:
               
chr4:14542838-14542612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
46, 142
               

               
Conread position:
               
119-377
               

               
Cow position:
               
chr4:34022746-34022489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
119-393
               

               
Cow position:
               
chr4:65950489-65950767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
32, 138
               

               
Conread position:
               
120-461
               

               
Cow position:
               
chr4:52779698-52780036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
122-396
               

               
Cow position:
               
chr4:44449660-44449395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
124-405
               

               
Cow position:
               
chr4:61313362-61313088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
28, 71
               

               
Conread position:
               
125-406
               

               
Cow position:
               
chr4:19118853-19119143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
126-349
               

               
Cow position:
               
chr4:4843399-4843176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 111
               

               
Conread position:
               
126-384
               

               
Cow position:
               
chr4:53346174-53346434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
67, 85
               

               
Conread position:
               
126-396
               

               
Cow position:
               
chr4:19501236-19500976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
262, 53
               

               
Conread position:
               
126-402
               

               
Cow position:
               
chr4:14152936-14153229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
27, 21
               

               
Conread position:
               
126-403
               

               
Cow position:
               
chr4:36290476-36290747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 21
               

               
Conread position:
               
126-405
               

               
Cow position:
               
chr4:30791816-30792093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
126-418
               

               
Cow position:
               
chr4:2099481-2099766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
30, 96
               

               
Conread position:
               
126-448
               

               
Cow position:
               
chr4:34369605-34369277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
36, 46
               

               
Conread position:
               
126-459
               

               
Cow position:
               
chr4:16881515-16881176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
127-349
               

               
Cow position:
               
chr4:2885695-2885472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
127-396
               

               
Cow position:
               
chr4:41371091-41370823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
127-407
               

               
Cow position:
               
chr4:22713642-22713367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
37, 99
               

               
Conread position:
               
127-412
               

               
Cow position:
               
chr4:13344395-13344668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
127-412
               

               
Cow position:
               
chr4:52823556-52823271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
127-447
               

               
Cow position:
               
chr4:51605759-51605452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
99, 60
               

               
Conread position:
               
127-459
               

               
Cow position:
               
chr4:23166753-23167078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
24, 103
               

               
Conread position:
               
128-299
               

               
Cow position:
               
chr4:47047743-47047913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
128-339
               

               
Cow position:
               
chr4:58423965-58423742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
128-397
               

               
Cow position:
               
chr4:68889707-68889446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
128-399
               

               
Cow position:
               
chr4:69543028-69543301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
26, 100
               

               
Conread position:
               
128-458
               

               
Cow position:
               
chr4:23758654-23758981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 134
               

               
Conread position:
               
128-461
               

               
Cow position:
               
chr4:33091229-33091552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
36, 95
               

               
Conread position:
               
129-402
               

               
Cow position:
               
chr4:54524479-54524224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
129-448
               

               
Cow position:
               
chr4:48409415-48409097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 44
               

               
Conread position:
               
130-407
               

               
Cow position:
               
chr4:45249828-45250101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
259, 32
               

               
Conread position:
               
131-402
               

               
Cow position:
               
chr4:36577777-36577507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
160, 97
               

               
Conread position:
               
131-405
               

               
Cow position:
               
chr4:20027248-20026980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
31, 59
               

               
Conread position:
               
131-447
               

               
Cow position:
               
chr4:52087788-52088095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
253, 56
               

               
Conread position:
               
132-397
               

               
Cow position:
               
chr4:19408146-19407881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 203
               

               
Conread position:
               
132-405
               

               
Cow position:
               
chr4:54927586-54927317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
133-400
               

               
Cow position:
               
chr4:18756288-18756554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
256, 88
               

               
Conread position:
               
133-404
               

               
Cow position:
               
chr4:4826980-4827250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
29, 116
               

               
Conread position:
               
133-426
               

               
Cow position:
               
chr4:37313025-37313310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 35
               

               
Conread position:
               
135-461
               

               
Cow position:
               
chr4:20184570-20184884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
244, 55
               

               
Conread position:
               
137-405
               

               
Cow position:
               
chr4:48172998-48173259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
15, 6
               

               
Conread position:
               
140-300
               

               
Cow position:
               
chr4:26011714-26011869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
140-402
               

               
Cow position:
               
chr4:21874036-21874296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
140-405
               

               
Cow position:
               
chr4:25537407-25537673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
182, 116
               

               
Conread position:
               
140-407
               

               
Cow position:
               
chr4:14500391-14500117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
87, 70
               

               
Conread position:
               
145-427
               

               
Cow position:
               
chr4:39609600-39609865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
146-402
               

               
Cow position:
               
chr4:48396927-48396676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
8, 80
               

               
Conread position:
               
146-405
               

               
Cow position:
               
chr4:52832150-52831890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
96, 59
               

               
Conread position:
               
147-454
               

               
Cow position:
               
chr4:25226820-25227127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
195, 16
               

               
Conread position:
               
148-387
               

               
Cow position:
               
chr4:15134338-15134093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
107, 12
               

               
Conread position:
               
148-447
               

               
Cow position:
               
chr4:34700168-34699857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
78, 151
               

               
Conread position:
               
148-452
               

               
Cow position:
               
chr4:65463615-65463321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
241, 42
               

               
Conread position:
               
149-456
               

               
Cow position:
               
chr4:13026173-13026489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 17
               

               
Conread position:
               
150-405
               

               
Cow position:
               
chr4:45073936-45074184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
233, 68
               

               
Conread position:
               
150-407
               

               
Cow position:
               
chr4:19578275-19578514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
175, 40
               

               
Conread position:
               
150-421
               

               
Cow position:
               
chr4:38946081-38946353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
76, 13
               

               
Conread position:
               
150-461
               

               
Cow position:
               
chr4:5580433-5580740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
225, 9
               

               
Conread position:
               
151-405
               

               
Cow position:
               
chr4:12473725-12473970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
151-405
               

               
Cow position:
               
chr4:13284259-13284503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
41, 9
               

               
Conread position:
               
152-401
               

               
Cow position:
               
chr4:1419096-1419347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
192, 80
               

               
Conread position:
               
153-378
               

               
Cow position:
               
chr4:46183287-46183510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
130, 7
               

               
Conread position:
               
153-399
               

               
Cow position:
               
chr4:65175261-65175026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
235, 7
               

               
Conread position:
               
153-457
               

               
Cow position:
               
chr4:5913473-5913167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
224, 79
               

               
Conread position:
               
153-458
               

               
Cow position:
               
chr4:55937782-55938078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 78
               

               
Conread position:
               
160-358
               

               
Cow position:
               
chr4:18107276-18107083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
160-412
               

               
Cow position:
               
chr4:19430243-19430493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
161-457
               

               
Cow position:
               
chr4:45724759-45725060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
153, 9
               

               
Conread position:
               
162-387
               

               
Cow position:
               
chr4:38157207-38156982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
162-405
               

               
Cow position:
               
chr4:37675499-37675737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
68, 87
               

               
Conread position:
               
163-348
               

               
Cow position:
               
chr4:67466607-67466789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
163-400
               

               
Cow position:
               
chr4:11380169-11380399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
163-403
               

               
Cow position:
               
chr4:213904-214138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
216, 41
               

               
Conread position:
               
163-405
               

               
Cow position:
               
chr4:45636049-45636291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 24
               

               
Conread position:
               
163-405
               

               
Cow position:
               
chr4:47280024-47280252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
226, 34
               

               
Conread position:
               
163-406
               

               
Cow position:
               
chr4:16513635-16513401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
143, 60
               

               
Conread position:
               
163-406
               

               
Cow position:
               
chr4:46494181-46494429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
126, 81
               

               
Conread position:
               
163-407
               

               
Cow position:
               
chr4:59873316-59873553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
164-404
               

               
Cow position:
               
chr4:17084455-17084217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
225, 208
               

               
Conread position:
               
165-406
               

               
Cow position:
               
chr4:22546951-22546717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
165-407
               

               
Cow position:
               
chr4:37732596-37732352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
226, 85
               

               
Conread position:
               
166-405
               

               
Cow position:
               
chr4:19098357-19098597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
82, 24
               

               
Conread position:
               
167-425
               

               
Cow position:
               
chr4:45013275-45013031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
222, 65
               

               
Conread position:
               
168-387
               

               
Cow position:
               
chr4:45596140-45595926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
168-405
               

               
Cow position:
               
chr4:65265421-65265181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
67, 82
               

               
Conread position:
               
169-461
               

               
Cow position:
               
chr4:61066665-61066954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
218, 77
               

               
Conread position:
               
170-451
               

               
Cow position:
               
chr4:11610768-11611055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
192, 74
               

               
Conread position:
               
170-460
               

               
Cow position:
               
chr4:2774609-2774894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
157, 60
               

               
Conread position:
               
171-406
               

               
Cow position:
               
chr4:46136644-46136875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
218, 73
               

               
Conread position:
               
175-405
               

               
Cow position:
               
chr4:45837734-45837505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
74, 35
               

               
Conread position:
               
178-410
               

               
Cow position:
               
chr4:47510290-47510512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
179-407
               

               
Cow position:
               
chr4:32693685-32693915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
51, 76
               

               
Conread position:
               
179-455
               

               
Cow position:
               
chr4:29709863-29709584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
183, 32
               

               
Conread position:
               
179-457
               

               
Cow position:
               
chr4:44184210-44183922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
181-381
               

               
Cow position:
               
chr4:9128-8934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
181-407
               

               
Cow position:
               
chr4:46566572-46566343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
181-407
               

               
Cow position:
               
chr4:54921184-54920965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
182-400
               

               
Cow position:
               
chr4:45563646-45563864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
104, 68
               

               
Conread position:
               
183-362
               

               
Cow position:
               
chr4:51729857-51730031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
183-396
               

               
Cow position:
               
chr4:34503197-34503412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
107, 54
               

               
Conread position:
               
183-397
               

               
Cow position:
               
chr4:10851548-10851334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
28, 56
               

               
Conread position:
               
184-405
               

               
Cow position:
               
chr4:20143002-20142787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
47, 71
               

               
Conread position:
               
186-391
               

               
Cow position:
               
chr4:19102977-19102771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 86
               

               
Conread position:
               
186-405
               

               
Cow position:
               
chr4:44773138-44772920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
37, 67
               

               
Conread position:
               
187-426
               

               
Cow position:
               
chr4:38822409-38822176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
188-403
               

               
Cow position:
               
chr4:64657386-64657180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
52, 106
               

               
Conread position:
               
189-403
               

               
Cow position:
               
chr4:19323884-19324097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
204, 11
               

               
Conread position:
               
189-458
               

               
Cow position:
               
chr4:19292631-19292912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
212, 55
               

               
Conread position:
               
192-388
               

               
Cow position:
               
chr4:49826167-49826358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
192-391
               

               
Cow position:
               
chr4:66136691-66136498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
192-458
               

               
Cow position:
               
chr4:63472160-63471892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
201, 45
               

               
Conread position:
               
194-405
               

               
Cow position:
               
chr4:1786-1996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
189, 50
               

               
Conread position:
               
198-356
               

               
Cow position:
               
chr4:19493472-19493630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
199-374
               

               
Cow position:
               
chr4:13991034-13990866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
199-402
               

               
Cow position:
               
chr4:26830623-26830826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
84, 43
               

               
Conread position:
               
199-425
               

               
Cow position:
               
chr4:20505161-20504944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
202-460
               

               
Cow position:
               
chr4:60719023-60719292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
203-380
               

               
Cow position:
               
chr4:61478526-61478704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
19, 44
               

               
Conread position:
               
203-386
               

               
Cow position:
               
chr4:61235278-61235101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
204-397
               

               
Cow position:
               
chr4:48422801-48422993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
211-402
               

               
Cow position:
               
chr4:54541708-54541515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
211-405
               

               
Cow position:
               
chr4:47038699-47038890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
211-405
               

               
Cow position:
               
chr4:49800626-49800817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
178, 21
               

               
Conread position:
               
211-448
               

               
Cow position:
               
chr4:36517553-36517311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
32, 78
               

               
Conread position:
               
211-455
               

               
Cow position:
               
chr4:34509771-34510024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
173, 26
               

               
Conread position:
               
211-456
               

               
Cow position:
               
chr4:20142034-20141792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
168, 24
               

               
Conread position:
               
212-378
               

               
Cow position:
               
chr4:42176538-42176377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
213-400
               

               
Cow position:
               
chr4:17851318-17851133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
175, 39
               

               
Conread position:
               
213-405
               

               
Cow position:
               
chr4:39984329-39984529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 107
               

               
Conread position:
               
213-461
               

               
Cow position:
               
chr4:28701289-28701546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
216-397
               

               
Cow position:
               
chr4:34562317-34562498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
70, 91
               

               
Conread position:
               
219-404
               

               
Cow position:
               
chr4:65131514-65131330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
223-457
               

               
Cow position:
               
chr4:38700214-38699980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
230-458
               

               
Cow position:
               
chr4:35638954-35638708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
150, 223
               

               
Conread position:
               
231-434
               

               
Cow position:
               
chr4:44854340-44854138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
157, 42
               

               
Conread position:
               
234-407
               

               
Cow position:
               
chr4:68590730-68590898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
155, 59
               

               
Conread position:
               
234-422
               

               
Cow position:
               
chr4:22196258-22196079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
235-406
               

               
Cow position:
               
chr4:10558491-10558663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
144, 14
               

               
Conread position:
               
235-414
               

               
Cow position:
               
chr4:16221920-16221745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
237-447
               

               
Cow position:
               
chr4:31758225-31758439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
138, 27
               

               
Conread position:
               
237-455
               

               
Cow position:
               
chr4:60141560-60141347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
172, 10
               

               
Conread position:
               
238-406
               

               
Cow position:
               
chr4:59002182-59002012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
151, 79
               

               
Conread position:
               
238-407
               

               
Cow position:
               
chr4:3268405-3268243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
238-409
               

               
Cow position:
               
chr4:19256653-19256823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
153, 9
               

               
Conread position:
               
238-414
               

               
Cow position:
               
chr4:65173058-65173235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 172
               

               
Conread position:
               
238-456
               

               
Cow position:
               
chr4:45626670-45626445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
151, 114
               

               
Conread position:
               
238-457
               

               
Cow position:
               
chr4:46050043-46049821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
144, 53
               

               
Conread position:
               
239-404
               

               
Cow position:
               
chr4:51920502-51920668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
16, 8
               

               
Conread position:
               
239-405
               

               
Cow position:
               
chr4:19431740-19431572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
239-452
               

               
Cow position:
               
chr4:28574191-28573973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
64, 8
               

               
Conread position:
               
239-461
               

               
Cow position:
               
chr4:42232064-42231832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
150, 8
               

               
Conread position:
               
241-403
               

               
Cow position:
               
chr4:21161063-21161228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
242-402
               

               
Cow position:
               
chr4:26012358-26012520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
72, 99
               

               
Conread position:
               
243-460
               

               
Cow position:
               
chr4:50687900-50687664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 135
               

               
Conread position:
               
244-402
               

               
Cow position:
               
chr4:45706007-45706160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
244-404
               

               
Cow position:
               
chr4:12135964-12135803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
245-407
               

               
Cow position:
               
chr4:34653905-34653740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
246-405
               

               
Cow position:
               
chr4:14020465-14020620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
138, 47
               

               
Conread position:
               
247-401
               

               
Cow position:
               
chr4:5964024-5963870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 7
               

               
Conread position:
               
247-405
               

               
Cow position:
               
chr4:33181510-33181667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
247-405
               

               
Cow position:
               
chr4:48381347-48381503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
138, 68
               

               
Conread position:
               
249-407
               

               
Cow position:
               
chr4:34983528-34983376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
253-405
               

               
Cow position:
               
chr4:19539265-19539112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
253-405
               

               
Cow position:
               
chr4:50676198-50676047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
136, 60
               

               
Conread position:
               
254-397
               

               
Cow position:
               
chr4:46560153-46560299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
109, 87
               

               
Conread position:
               
254-405
               

               
Cow position:
               
chr4:60363323-60363473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
129, 78
               

               
Conread position:
               
254-407
               

               
Cow position:
               
chr4:38210002-38209848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
254-459
               

               
Cow position:
               
chr4:43542498-43542283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
254-461
               

               
Cow position:
               
chr4:64029091-64029294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
137, 9
               

               
Conread position:
               
255-397
               

               
Cow position:
               
chr4:29318102-29317957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
255-404
               

               
Cow position:
               
chr4:19456713-19456565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
256-403
               

               
Cow position:
               
chr4:15462278-15462128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
257-388
               

               
Cow position:
               
chr4:12441871-12442001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
257-388
               

               
Cow position:
               
chr4:13241601-13241731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
257-396
               

               
Cow position:
               
chr4:4295562-4295700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
257-400
               

               
Cow position:
               
chr4:32272997-32272855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 6
               

               
Conread position:
               
257-404
               

               
Cow position:
               
chr4:36744556-36744700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 57
               

               
Conread position:
               
257-405
               

               
Cow position:
               
chr4:60443064-60442920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
257-406
               

               
Cow position:
               
chr4:46404928-46404782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
257-407
               

               
Cow position:
               
chr4:19333362-19333513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
257-412
               

               
Cow position:
               
chr4:13918957-13919110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
132, 41
               

               
Conread position:
               
257-451
               

               
Cow position:
               
chr4:5727820-5728022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 157
               

               
Conread position:
               
258-406
               

               
Cow position:
               
chr4:386415-386268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
131, 56
               

               
Conread position:
               
259-389
               

               
Cow position:
               
chr4:43916266-43916396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
259-405
               

               
Cow position:
               
chr4:46435301-46435449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
261-397
               

               
Cow position:
               
chr4:10472169-10472308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
261-406
               

               
Cow position:
               
chr4:33838820-33838677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
128, 52
               

               
Conread position:
               
261-407
               

               
Cow position:
               
chr4:60527160-60527309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
261-453
               

               
Cow position:
               
chr4:21506976-21506771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
138, 121
               

               
Conread position:
               
265-458
               

               
Cow position:
               
chr4:61268175-61268376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
267-407
               

               
Cow position:
               
chr4:41907596-41907455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
268-455
               

               
Cow position:
               
chr4:8083812-8083613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
273-456
               

               
Cow position:
               
chr4:32790011-32789820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
107, 54
               

               
Conread position:
               
274-407
               

               
Cow position:
               
chr4:54650492-54650357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
274-460
               

               
Cow position:
               
chr4:33360099-33360293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
123, 21
               

               
Conread position:
               
276-408
               

               
Cow position:
               
chr4:56410340-56410473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
113, 81
               

               
Conread position:
               
276-455
               

               
Cow position:
               
chr4:18576539-18576362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
281-404
               

               
Cow position:
               
chr4:58389242-58389119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
106, 119
               

               
Conread position:
               
282-405
               

               
Cow position:
               
chr4:61887637-61887763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
285-405
               

               
Cow position:
               
chr4:46761611-46761732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
285-456
               

               
Cow position:
               
chr4:30003821-30003651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
104, 114
               

               
Conread position:
               
286-460
               

               
Cow position:
               
chr4:54501018-54500845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
107, 37
               

               
Conread position:
               
287-400
               

               
Cow position:
               
chr4:5047140-5047026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
287-407
               

               
Cow position:
               
chr4:13508235-13508112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
287-407
               

               
Cow position:
               
chr4:51083332-51083214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
287-461
               

               
Cow position:
               
chr4:65537058-65536892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
289-459
               

               
Cow position:
               
chr4:21275593-21275413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
292-407
               

               
Cow position:
               
chr4:479781-479666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
97, 111
               

               
Conread position:
               
303-457
               

               
Cow position:
               
chr4:10544572-10544724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
104, 95
               

               
Conread position:
               
306-420
               

               
Cow position:
               
chr4:20115992-20115874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
308-461
               

               
Cow position:
               
chr4:19558712-19558868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
310-407
               

               
Cow position:
               
chr4:30943983-30944081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
316-457
               

               
Cow position:
               
chr4:66509672-66509823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               
Show alignments to all cow chromosomes.