Cow genome map

Conread name: Mixn-0035g19

Conread position: 8-130
Cow position: chr11:30111804-30111684 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 39, 10

Conread position: 8-211
Cow position: chr11:80596550-80596357 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 43, 80

Conread position: 8-236
Cow position: chr11:36917570-36917782 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 39, 80

Conread position: 8-261
Cow position: chr11:47883019-47882773 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 80

Conread position: 8-285
Cow position: chr11:2639449-2639712 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 80

Conread position: 8-670
Cow position: chr11:43430245-43430901 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 34

Conread position: 9-123
Cow position: chr11:3234335-3234218 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 9-219
Cow position: chr11:61178585-61178369 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 8, 69

Conread position: 9-243
Cow position: chr11:70710006-70709771 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 16, 81

Conread position: 9-251
Cow position: chr11:84775285-84775054 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 39, 0

Conread position: 9-272
Cow position: chr11:64867801-64868062 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 74, 19

Conread position: 9-277
Cow position: chr11:48233033-48232772 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 202
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 212, 39

Conread position: 9-278
Cow position: chr11:30888064-30888330 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 179, 39

Conread position: 9-283
Cow position: chr11:54741870-54742132 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 184
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 32

Conread position: 9-307
Cow position: chr11:64351572-64351867 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 35, 23

Conread position: 9-512
Cow position: chr11:3283236-3282773 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 80

Conread position: 9-624
Cow position: chr11:49210622-49211229 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 80

Conread position: 9-649
Cow position: chr11:59702709-59702065 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 79

Conread position: 9-650
Cow position: chr11:17321860-17321241 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 11

Conread position: 9-668
Cow position: chr11:69119514-69118859 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 80

Conread position: 9-670
Cow position: chr11:48272438-48271759 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 11

Conread position: 9-670
Cow position: chr11:61454307-61454978 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 66

Conread position: 10-333
Cow position: chr11:69076126-69075809 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 218
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 44, 79

Conread position: 10-547
Cow position: chr11:36849150-36848622 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 261

Conread position: 10-576
Cow position: chr11:4436527-4435972 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 51

Conread position: 10-670
Cow position: chr11:19788348-19787708 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 75

Conread position: 10-694
Cow position: chr11:1485667-1486335 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 78

Conread position: 10-695
Cow position: chr11:23137833-23138538 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 227

Conread position: 11-123
Cow position: chr11:17991418-17991302 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 11-256
Cow position: chr11:73983799-73984029 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 9

Conread position: 11-262
Cow position: chr11:53717599-53717838 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 60, 0

Conread position: 11-316
Cow position: chr11:79018816-79019144 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 223
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 270

Conread position: 11-324
Cow position: chr11:61181134-61181442 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 206
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 36, 68

Conread position: 11-670
Cow position: chr11:21893957-21894589 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 77

Conread position: 11-671
Cow position: chr11:48650178-48649505 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 75

Conread position: 12-490
Cow position: chr11:30597228-30596730 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 342
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 15, 44

Conread position: 13-212
Cow position: chr11:34623405-34623189 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 171
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 11, 0

Conread position: 14-212
Cow position: chr11:75246559-75246367 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 157
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 67

Conread position: 14-232
Cow position: chr11:59916359-59916144 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 12, 75

Conread position: 14-261
Cow position: chr11:58938526-58938775 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 11, 75

Conread position: 14-574
Cow position: chr11:41811694-41812259 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 119

Conread position: 14-614
Cow position: chr11:30879908-30879290 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 231

Conread position: 15-213
Cow position: chr11:13843661-13843465 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 34, 75

Conread position: 16-670
Cow position: chr11:77750575-77751207 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 14

Conread position: 17-278
Cow position: chr11:81763055-81762815 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 17-324
Cow position: chr11:69307716-69307416 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 34, 60

Conread position: 19-430
Cow position: chr11:27932486-27932063 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 67

Conread position: 20-137
Cow position: chr11:48932406-48932524 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 33, 66

Conread position: 20-139
Cow position: chr11:8419747-8419866 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 65

Conread position: 20-212
Cow position: chr11:83578963-83579158 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 29, 21

Conread position: 20-245
Cow position: chr11:37982365-37982592 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 68

Conread position: 20-246
Cow position: chr11:81606061-81605843 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 34, 71

Conread position: 20-314
Cow position: chr11:22747125-22747410 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 27, 69

Conread position: 20-333
Cow position: chr11:14466273-14466588 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 216
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 68

Conread position: 20-395
Cow position: chr11:16906848-16907214 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 260
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 29, 68

Conread position: 20-397
Cow position: chr11:53512310-53511908 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 272
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 177

Conread position: 20-403
Cow position: chr11:26845386-26845760 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 257
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 27, 68

Conread position: 20-479
Cow position: chr11:33311192-33310716 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 248

Conread position: 20-667
Cow position: chr11:17831023-17831671 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 69

Conread position: 21-661
Cow position: chr11:952468-951842 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 66

Conread position: 21-669
Cow position: chr11:44234557-44233926 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 69

Conread position: 22-215
Cow position: chr11:17966073-17966249 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 26, 63

Conread position: 22-249
Cow position: chr11:70517397-70517612 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 27, 58

Conread position: 22-444
Cow position: chr11:17574150-17574540 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 289
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 294, 25

Conread position: 24-197
Cow position: chr11:63550034-63549859 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 72

Conread position: 24-224
Cow position: chr11:47904312-47904125 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 194, 17

Conread position: 24-224
Cow position: chr11:70513794-70513594 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 23, 64

Conread position: 24-230
Cow position: chr11:56895753-56895974 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 23, 153

Conread position: 24-243
Cow position: chr11:74379072-74378862 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 64

Conread position: 24-284
Cow position: chr11:82730805-82731051 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 17, 64

Conread position: 24-314
Cow position: chr11:6202635-6202366 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 64

Conread position: 24-336
Cow position: chr11:41293625-41293920 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 57

Conread position: 24-423
Cow position: chr11:72375487-72375884 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 64

Conread position: 24-492
Cow position: chr11:377441-377919 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 107

Conread position: 24-503
Cow position: chr11:33340940-33341422 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 40

Conread position: 25-277
Cow position: chr11:62754120-62754365 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 29, 63

Conread position: 26-231
Cow position: chr11:4436938-4436747 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 55

Conread position: 26-670
Cow position: chr11:50073132-50072530 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 53

Conread position: 29-338
Cow position: chr11:6633900-6633599 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 217
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 24, 59

Conread position: 31-558
Cow position: chr11:73924360-73924890 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 17

Conread position: 32-245
Cow position: chr11:6092572-6092368 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 32

Conread position: 33-212
Cow position: chr11:45437478-45437297 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 101

Conread position: 34-668
Cow position: chr11:62150688-62151317 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 188

Conread position: 48-278
Cow position: chr11:6245503-6245271 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 16, 177

Conread position: 48-475
Cow position: chr11:2832505-2832921 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 163

Conread position: 48-679
Cow position: chr11:18508846-18509462 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 67

Conread position: 50-219
Cow position: chr11:42067222-42067065 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 50-261
Cow position: chr11:62778616-62778414 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 50-389
Cow position: chr11:70114654-70114304 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 228
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 79, 334

Conread position: 52-324
Cow position: chr11:55203291-55203550 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 264, 34

Conread position: 69-333
Cow position: chr11:68913303-68913043 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 175
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 8, 41

Conread position: 70-276
Cow position: chr11:71854125-71854324 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 9, 22

Conread position: 70-308
Cow position: chr11:83033079-83033311 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 62, 17

Conread position: 70-456
Cow position: chr11:70422436-70422801 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 255
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 20, 62

Conread position: 74-670
Cow position: chr11:77758606-77759198 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 17

Conread position: 75-246
Cow position: chr11:21830058-21830225 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 12, 37

Conread position: 75-251
Cow position: chr11:42084520-42084696 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 12, 41

Conread position: 75-261
Cow position: chr11:62889739-62889924 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 30

Conread position: 75-271
Cow position: chr11:36521033-36520834 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 57

Conread position: 75-282
Cow position: chr11:41213205-41212990 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 37

Conread position: 75-308
Cow position: chr11:57503633-57503407 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 12, 56

Conread position: 75-314
Cow position: chr11:56288698-56288467 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 12, 34

Conread position: 75-323
Cow position: chr11:1067285-1067532 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 30

Conread position: 75-382
Cow position: chr11:32254063-32254377 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 214
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 55

Conread position: 75-430
Cow position: chr11:19591840-19592200 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 248
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 34, 16

Conread position: 75-458
Cow position: chr11:25620237-25620629 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 273
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 12, 37

Conread position: 75-492
Cow position: chr11:53773836-53773404 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 290
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 15, 34

Conread position: 75-598
Cow position: chr11:70483698-70484234 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 31

Conread position: 75-668
Cow position: chr11:75479869-75480474 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 37

Conread position: 75-679
Cow position: chr11:30165664-30165046 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 62

Conread position: 77-670
Cow position: chr11:40459261-40458680 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 28

Conread position: 78-465
Cow position: chr11:26143944-26144325 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 274
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 9, 27

Conread position: 78-480
Cow position: chr11:66188169-66188577 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 277
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 9, 27

Conread position: 79-513
Cow position: chr11:49149195-49148759 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 322
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 11, 26

Conread position: 81-271
Cow position: chr11:29786346-29786539 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 81-636
Cow position: chr11:63156775-63157310 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 376
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 13, 17

Conread position: 81-670
Cow position: chr11:58400398-58399829 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 51

Conread position: 82-323
Cow position: chr11:66518633-66518400 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 94, 0

Conread position: 83-223
Cow position: chr11:6156183-6156326 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 53

Conread position: 84-280
Cow position: chr11:56290655-56290462 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 84-509
Cow position: chr11:56654710-56654266 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 309
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 28, 17

Conread position: 85-192
Cow position: chr11:36128549-36128443 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 85-280
Cow position: chr11:5789755-5789949 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 85-519
Cow position: chr11:21497670-21497247 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 255
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 33, 170

Conread position: 85-552
Cow position: chr11:80761228-80761702 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 126

Conread position: 85-619
Cow position: chr11:28644230-28643697 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 44

Conread position: 86-243
Cow position: chr11:25604092-25603935 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 24

Conread position: 86-276
Cow position: chr11:29983575-29983762 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 88-305
Cow position: chr11:47837461-47837246 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 89-408
Cow position: chr11:70277970-70278294 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 221
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 44

Conread position: 90-408
Cow position: chr11:15373979-15373667 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 58, 41

Conread position: 90-434
Cow position: chr11:61958603-61958959 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 68

Conread position: 90-505
Cow position: chr11:34032057-34032477 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 91-262
Cow position: chr11:58173763-58173594 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 91-482
Cow position: chr11:77128801-77128411 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 268
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 52, 306

Conread position: 92-403
Cow position: chr11:40573199-40573513 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 219
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 224, 14

Conread position: 92-670
Cow position: chr11:71168455-71169016 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 49

Conread position: 93-314
Cow position: chr11:70826085-70825870 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 93-401
Cow position: chr11:71500998-71501312 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 218
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 223, 27

Conread position: 94-389
Cow position: chr11:40478714-40479020 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 220
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 27, 178

Conread position: 94-651
Cow position: chr11:29946778-29947360 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 38

Conread position: 94-663
Cow position: chr11:25387207-25386637 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 60

Conread position: 95-655
Cow position: chr11:17278540-17279088 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 37

Conread position: 97-259
Cow position: chr11:67312913-67312752 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 99-223
Cow position: chr11:49486909-49486786 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 101-277
Cow position: chr11:63919925-63920100 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 101-487
Cow position: chr11:55334036-55333646 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 34

Conread position: 102-440
Cow position: chr11:36238908-36238566 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 244
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 21, 113

Conread position: 103-240
Cow position: chr11:30404694-30404559 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 116, 38

Conread position: 103-314
Cow position: chr11:3740081-3739872 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 172, 0

Conread position: 103-540
Cow position: chr11:34963196-34962749 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 28

Conread position: 103-670
Cow position: chr11:73512317-73512863 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 15

Conread position: 104-235
Cow position: chr11:2835984-2835854 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 104-393
Cow position: chr11:3418957-3419241 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 187
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 174, 161

Conread position: 104-446
Cow position: chr11:34144799-34145138 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 244
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 212, 27

Conread position: 104-473
Cow position: chr11:2084269-2083899 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 259
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 212, 28

Conread position: 104-502
Cow position: chr11:30476125-30475724 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 279
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 9, 28

Conread position: 104-635
Cow position: chr11:33753788-33754325 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 34

Conread position: 104-668
Cow position: chr11:33414362-33413803 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 27

Conread position: 104-670
Cow position: chr11:4207434-4206854 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 27

Conread position: 104-670
Cow position: chr11:7924468-7925033 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 26

Conread position: 105-362
Cow position: chr11:59024236-59024495 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 172
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 236, 27

Conread position: 105-435
Cow position: chr11:36286825-36286488 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 239
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 68

Conread position: 105-512
Cow position: chr11:48474828-48474419 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 26

Conread position: 106-282
Cow position: chr11:35351917-35352092 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 164, 24

Conread position: 106-402
Cow position: chr11:30955124-30954820 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 204
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 208, 25

Conread position: 107-261
Cow position: chr11:6395874-6395725 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 107-289
Cow position: chr11:71111016-71110835 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 26, 164

Conread position: 107-325
Cow position: chr11:21508128-21507912 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 6, 25

Conread position: 107-457
Cow position: chr11:32436455-32436096 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 24

Conread position: 107-457
Cow position: chr11:42043872-42044223 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 56

Conread position: 107-664
Cow position: chr11:67345542-67346079 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 21

Conread position: 108-318
Cow position: chr11:72333710-72333507 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 208, 22

Conread position: 108-344
Cow position: chr11:35573370-35573601 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 207, 22

Conread position: 108-635
Cow position: chr11:18086226-18086744 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 21

Conread position: 108-679
Cow position: chr11:8524994-8525555 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 22

Conread position: 109-251
Cow position: chr11:17517519-17517378 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 109-333
Cow position: chr11:80412892-80413111 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 128, 116

Conread position: 109-419
Cow position: chr11:13592856-13592542 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 21

Conread position: 109-501
Cow position: chr11:79728548-79728948 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 5

Conread position: 109-513
Cow position: chr11:83066607-83066209 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 294
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 207, 11

Conread position: 109-668
Cow position: chr11:46329618-46329061 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 19

Conread position: 110-314
Cow position: chr11:82289698-82289494 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 167, 21

Conread position: 110-494
Cow position: chr11:21549598-21549225 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 270
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 206, 20

Conread position: 110-552
Cow position: chr11:51756417-51755990 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 20

Conread position: 110-582
Cow position: chr11:54334448-54333977 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 21

Conread position: 110-670
Cow position: chr11:2344370-2343846 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 18

Conread position: 111-254
Cow position: chr11:25783831-25783689 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 111-272
Cow position: chr11:45849379-45849541 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 91, 19

Conread position: 111-273
Cow position: chr11:34136359-34136201 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 111-278
Cow position: chr11:29659679-29659512 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 32, 18

Conread position: 111-278
Cow position: chr11:35109420-35109585 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 85, 20

Conread position: 111-280
Cow position: chr11:13940305-13940141 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 19

Conread position: 111-287
Cow position: chr11:3714939-3714769 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 111-292
Cow position: chr11:76835506-76835690 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 159, 20

Conread position: 111-314
Cow position: chr11:50472435-50472237 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 111-322
Cow position: chr11:35926791-35926995 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 111-325
Cow position: chr11:8670134-8669916 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 21

Conread position: 111-333
Cow position: chr11:30808475-30808701 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 20

Conread position: 111-357
Cow position: chr11:53816972-53816736 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 19

Conread position: 111-360
Cow position: chr11:29677324-29677071 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 174
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 110, 19

Conread position: 111-377
Cow position: chr11:63435639-63435364 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 167, 20

Conread position: 111-395
Cow position: chr11:30209704-30209992 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 202
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 170, 20

Conread position: 111-403
Cow position: chr11:37804435-37804734 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 211
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 215, 21

Conread position: 111-421
Cow position: chr11:41215851-41215550 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 212
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 182, 20

Conread position: 111-424
Cow position: chr11:70600710-70601020 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 227
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 159, 20

Conread position: 111-497
Cow position: chr11:83398024-83397632 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 278
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 206, 18

Conread position: 111-509
Cow position: chr11:81138329-81137939 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 273
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 146, 18

Conread position: 111-525
Cow position: chr11:85723811-85723403 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 19

Conread position: 111-534
Cow position: chr11:71868484-71868911 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 20

Conread position: 111-545
Cow position: chr11:6233761-6234196 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 30

Conread position: 111-553
Cow position: chr11:46747742-46748190 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 19

Conread position: 111-561
Cow position: chr11:70609917-70609456 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 309
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 110, 84

Conread position: 111-565
Cow position: chr11:42835832-42836298 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 317
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 110, 23

Conread position: 111-589
Cow position: chr11:38236370-38235875 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 19

Conread position: 111-646
Cow position: chr11:84385520-84386050 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 19

Conread position: 111-670
Cow position: chr11:30708622-30708053 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 18

Conread position: 111-670
Cow position: chr11:42016521-42017066 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 19

Conread position: 111-679
Cow position: chr11:13500131-13499567 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 19

Conread position: 112-262
Cow position: chr11:66939475-66939624 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 112-338
Cow position: chr11:29308698-29308468 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 155
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 151, 18

Conread position: 112-339
Cow position: chr11:53510385-53510611 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 99, 17

Conread position: 112-358
Cow position: chr11:19232834-19233080 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 165
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 214, 18

Conread position: 112-367
Cow position: chr11:69016093-69015831 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 175
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 20

Conread position: 112-368
Cow position: chr11:76653137-76652876 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 18

Conread position: 112-404
Cow position: chr11:83687316-83687608 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 204, 17

Conread position: 112-441
Cow position: chr11:35724086-35723760 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 217
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 165, 22

Conread position: 112-468
Cow position: chr11:25783582-25783248 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 235
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 244, 18

Conread position: 112-478
Cow position: chr11:45872194-45872572 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 264
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 182, 18

Conread position: 112-486
Cow position: chr11:36940478-36940862 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 271
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 202, 18

Conread position: 112-519
Cow position: chr11:13191352-13190927 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 17

Conread position: 112-531
Cow position: chr11:1070973-1071398 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 19

Conread position: 112-535
Cow position: chr11:7315032-7315433 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 18

Conread position: 112-543
Cow position: chr11:32595575-32595150 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 18

Conread position: 112-650
Cow position: chr11:43524726-43524202 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 18

Conread position: 112-668
Cow position: chr11:59903008-59902459 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 22

Conread position: 112-677
Cow position: chr11:8496149-8495586 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 18

Conread position: 113-238
Cow position: chr11:60720339-60720463 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 113-276
Cow position: chr11:13863985-13864150 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 113-276
Cow position: chr11:62811413-62811252 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 113-278
Cow position: chr11:15369506-15369339 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 113-318
Cow position: chr11:17721684-17721889 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 167, 182

Conread position: 113-446
Cow position: chr11:15772596-15772945 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 254
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 184, 108

Conread position: 113-459
Cow position: chr11:62620493-62620150 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 230
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 136, 17

Conread position: 113-512
Cow position: chr11:67804859-67804465 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 288
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 203, 28

Conread position: 113-609
Cow position: chr11:37975050-37974545 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 19

Conread position: 113-670
Cow position: chr11:30192296-30191722 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 17

Conread position: 113-677
Cow position: chr11:40467008-40467573 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 19

Conread position: 113-677
Cow position: chr11:66733946-66733384 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 17

Conread position: 113-679
Cow position: chr11:17889612-17890175 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 17

Conread position: 114-249
Cow position: chr11:71767717-71767583 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 114-477
Cow position: chr11:3726403-3726033 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 257
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 202, 69

Conread position: 114-516
Cow position: chr11:36981682-36981278 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 174

Conread position: 115-324
Cow position: chr11:35536701-35536497 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 115-324
Cow position: chr11:52690407-52690612 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 115-330
Cow position: chr11:35213053-35213265 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 168, 15

Conread position: 115-402
Cow position: chr11:2933261-2932974 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 107, 15

Conread position: 115-459
Cow position: chr11:11469536-11469868 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 225
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 53, 15

Conread position: 115-468
Cow position: chr11:62239859-62239506 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 236
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 170, 15

Conread position: 115-478
Cow position: chr11:13043031-13043395 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 16

Conread position: 115-534
Cow position: chr11:36182809-36182381 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 16

Conread position: 115-668
Cow position: chr11:259059-259619 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 366
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 148, 16

Conread position: 115-676
Cow position: chr11:7590303-7589747 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 16

Conread position: 115-682
Cow position: chr11:52297106-52297677 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 6

Conread position: 116-270
Cow position: chr11:9237733-9237886 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 116-348
Cow position: chr11:31875206-31874970 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 198, 16

Conread position: 116-590
Cow position: chr11:4323472-4323003 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 15

Conread position: 116-637
Cow position: chr11:23251480-23252011 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 15

Conread position: 116-641
Cow position: chr11:61203279-61202742 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 14

Conread position: 116-668
Cow position: chr11:44819207-44818669 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 14

Conread position: 117-245
Cow position: chr11:86895489-86895362 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 117-256
Cow position: chr11:68173645-68173506 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 117-261
Cow position: chr11:64409083-64408946 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 117-277
Cow position: chr11:35669840-35669998 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 117-306
Cow position: chr11:61675581-61675396 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 117-322
Cow position: chr11:7385551-7385349 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 117-324
Cow position: chr11:40395553-40395348 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 131, 166

Conread position: 117-333
Cow position: chr11:48660047-48659832 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 117-399
Cow position: chr11:30830501-30830791 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 192
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 15

Conread position: 117-414
Cow position: chr11:70086445-70086134 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 217
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 15

Conread position: 117-416
Cow position: chr11:23271888-23272193 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 209
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 28, 13

Conread position: 117-417
Cow position: chr11:27913398-27913080 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 213
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 162, 0

Conread position: 117-447
Cow position: chr11:39462736-39462395 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 14

Conread position: 117-495
Cow position: chr11:19247087-19247467 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 13

Conread position: 117-504
Cow position: chr11:83043250-83043638 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 259
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 132, 13

Conread position: 117-507
Cow position: chr11:17083198-17083578 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 14

Conread position: 117-513
Cow position: chr11:11125775-11125376 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 14

Conread position: 117-527
Cow position: chr11:78380952-78381345 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 13

Conread position: 117-609
Cow position: chr11:68206729-68207230 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 14

Conread position: 117-670
Cow position: chr11:3393097-3393651 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 14

Conread position: 117-670
Cow position: chr11:53778727-53778175 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 14

Conread position: 117-670
Cow position: chr11:77745138-77745705 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 270

Conread position: 118-403
Cow position: chr11:47004457-47004171 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 194
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 161, 33

Conread position: 118-422
Cow position: chr11:3703064-3702753 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 200
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 265

Conread position: 118-447
Cow position: chr11:23586750-23586413 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 238
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 198, 16

Conread position: 118-522
Cow position: chr11:3720365-3719956 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 282
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 169, 12

Conread position: 118-541
Cow position: chr11:87155633-87155199 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 298
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 13, 111

Conread position: 118-638
Cow position: chr11:55744579-55744064 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 13

Conread position: 118-670
Cow position: chr11:44032123-44031557 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 12

Conread position: 119-506
Cow position: chr11:66041389-66040991 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 12

Conread position: 119-582
Cow position: chr11:64089986-64090441 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 28

Conread position: 120-539
Cow position: chr11:18588476-18588892 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 9

Conread position: 123-401
Cow position: chr11:77118806-77118534 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 188
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 208, 8

Conread position: 123-487
Cow position: chr11:22499261-22499613 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 256
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 197, 9

Conread position: 123-670
Cow position: chr11:81931010-81931511 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 421, 8

Conread position: 125-274
Cow position: chr11:12804193-12804340 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 128-507
Cow position: chr11:62155741-62155350 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 312

Conread position: 129-333
Cow position: chr11:33345547-33345344 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 146, 0

Conread position: 129-487
Cow position: chr11:27747025-27746655 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 256
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 40, 19

Conread position: 129-493
Cow position: chr11:62573906-62574268 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 234
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 36, 127

Conread position: 129-554
Cow position: chr11:40792603-40793028 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 110

Conread position: 130-259
Cow position: chr11:43914392-43914263 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 130-278
Cow position: chr11:62230281-62230133 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 130-451
Cow position: chr11:29960396-29960078 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 212
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 295, 83

Conread position: 130-470
Cow position: chr11:82940524-82940862 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 251
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 11, 18

Conread position: 130-472
Cow position: chr11:36799207-36799546 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 158, 30

Conread position: 130-476
Cow position: chr11:20238779-20238421 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 225
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 288

Conread position: 130-479
Cow position: chr11:17495641-17496000 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 245
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 134, 161

Conread position: 130-489
Cow position: chr11:2917486-2917841 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 245
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 196, 29

Conread position: 130-533
Cow position: chr11:41985945-41986350 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 152

Conread position: 130-619
Cow position: chr11:80923222-80923727 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 30

Conread position: 130-638
Cow position: chr11:43898239-43897726 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 104

Conread position: 130-668
Cow position: chr11:25745407-25744883 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 82

Conread position: 130-670
Cow position: chr11:15285514-15286059 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 145

Conread position: 130-670
Cow position: chr11:27248591-27248054 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 29

Conread position: 131-235
Cow position: chr11:63485037-63484931 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 131-324
Cow position: chr11:51729386-51729197 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 144, 0

Conread position: 131-423
Cow position: chr11:71492762-71493056 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 202
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 157, 95

Conread position: 131-478
Cow position: chr11:3234175-3233827 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 244
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 90, 95

Conread position: 131-487
Cow position: chr11:31228062-31227732 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 250
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 151, 0

Conread position: 131-487
Cow position: chr11:52380772-52381133 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 243
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 36, 21

Conread position: 131-490
Cow position: chr11:55052971-55052607 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 238
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 157, 143

Conread position: 131-501
Cow position: chr11:17227545-17227914 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 265
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 139, 83

Conread position: 131-504
Cow position: chr11:1362368-1362758 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 95

Conread position: 131-516
Cow position: chr11:8988132-8988519 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 24

Conread position: 131-561
Cow position: chr11:30934516-30934085 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 293
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 174, 89

Conread position: 131-608
Cow position: chr11:49153048-49152559 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 78

Conread position: 131-637
Cow position: chr11:61427693-61427206 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 53

Conread position: 131-670
Cow position: chr11:1380775-1380253 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 163

Conread position: 131-670
Cow position: chr11:42359219-42358683 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 164

Conread position: 131-670
Cow position: chr11:43360685-43361231 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 10

Conread position: 131-670
Cow position: chr11:44636655-44637202 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 12

Conread position: 131-670
Cow position: chr11:45631666-45632232 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 21

Conread position: 131-670
Cow position: chr11:76114742-76114212 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 47

Conread position: 131-670
Cow position: chr11:77705850-77705323 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 23

Conread position: 131-677
Cow position: chr11:67747379-67746833 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 28

Conread position: 132-397
Cow position: chr11:8544919-8545186 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 183, 93

Conread position: 132-463
Cow position: chr11:4662949-4663277 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 226
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 171, 23

Conread position: 132-479
Cow position: chr11:34121299-34120944 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 245
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 10, 24

Conread position: 132-487
Cow position: chr11:63482332-63482688 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 9

Conread position: 132-513
Cow position: chr11:8147800-8148178 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 265
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 184, 129

Conread position: 132-609
Cow position: chr11:20602325-20601857 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 54

Conread position: 132-626
Cow position: chr11:30638851-30639329 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 143

Conread position: 132-665
Cow position: chr11:33349602-33350136 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 153

Conread position: 132-695
Cow position: chr11:58588443-58587874 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 58

Conread position: 133-487
Cow position: chr11:36194394-36194030 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 238
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 97, 103

Conread position: 133-636
Cow position: chr11:34113363-34112856 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 135

Conread position: 133-663
Cow position: chr11:26483803-26483302 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 14

Conread position: 133-670
Cow position: chr11:23128442-23128993 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 162

Conread position: 133-670
Cow position: chr11:50152715-50153255 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 27

Conread position: 133-679
Cow position: chr11:25791597-25792146 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 108

Conread position: 134-331
Cow position: chr11:30370201-30370010 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 134-523
Cow position: chr11:80530455-80530074 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 275
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 181, 68

Conread position: 134-534
Cow position: chr11:23232423-23232820 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 291
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 87, 53

Conread position: 134-544
Cow position: chr11:60301873-60302275 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 56

Conread position: 134-682
Cow position: chr11:4052148-4052685 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 48

Conread position: 135-316
Cow position: chr11:36920479-36920662 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 47, 143

Conread position: 135-404
Cow position: chr11:9270631-9270908 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 199
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 183, 27

Conread position: 135-408
Cow position: chr11:1157739-1157460 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 174, 80

Conread position: 135-513
Cow position: chr11:41272233-41271852 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 259
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 181, 103

Conread position: 135-513
Cow position: chr11:43646316-43646703 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 258
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 161, 155

Conread position: 136-429
Cow position: chr11:38334618-38334310 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 178, 139

Conread position: 136-620
Cow position: chr11:76606767-76606296 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 139

Conread position: 136-635
Cow position: chr11:21852207-21852691 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 38

Conread position: 137-508
Cow position: chr11:73353966-73354337 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 247
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 175, 159

Conread position: 137-668
Cow position: chr11:42083562-42083038 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 83

Conread position: 139-546
Cow position: chr11:287244-287653 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 279
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 167, 135

Conread position: 139-668
Cow position: chr11:83357486-83356956 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 72

Conread position: 140-556
Cow position: chr11:39118848-39118456 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 283
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 55, 135

Conread position: 140-590
Cow position: chr11:35873912-35874337 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 306
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 154, 121

Conread position: 140-679
Cow position: chr11:67246876-67246353 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 343
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 310, 70

Conread position: 141-462
Cow position: chr11:63433970-63434293 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 221
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 175, 27

Conread position: 141-513
Cow position: chr11:49934641-49935030 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 270
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 139, 225

Conread position: 142-457
Cow position: chr11:33348099-33348417 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 227
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 174, 13

Conread position: 142-670
Cow position: chr11:36987038-36986525 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 119

Conread position: 142-670
Cow position: chr11:64638437-64638955 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 78

Conread position: 142-679
Cow position: chr11:26067094-26067633 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 132

Conread position: 142-695
Cow position: chr11:33527141-33526605 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 141

Conread position: 143-314
Cow position: chr11:56734717-56734548 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 84

Conread position: 143-489
Cow position: chr11:81162345-81162695 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 240
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 154, 219

Conread position: 143-492
Cow position: chr11:34829698-34830048 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 245
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 173, 70

Conread position: 143-612
Cow position: chr11:3833276-3833733 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 36

Conread position: 143-666
Cow position: chr11:74316796-74316248 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 11

Conread position: 143-670
Cow position: chr11:13061147-13061660 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 148

Conread position: 143-670
Cow position: chr11:63469963-63469446 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 16

Conread position: 143-670
Cow position: chr11:64044321-64043808 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 139

Conread position: 144-492
Cow position: chr11:45897962-45898324 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 260
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 13, 136

Conread position: 144-670
Cow position: chr11:38639198-38638679 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 104

Conread position: 144-673
Cow position: chr11:5418169-5418704 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 22

Conread position: 146-485
Cow position: chr11:47545216-47544867 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 237
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 120, 63

Conread position: 149-492
Cow position: chr11:5226649-5227007 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 242
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 65, 133

Conread position: 150-665
Cow position: chr11:29916622-29916111 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 252

Conread position: 157-516
Cow position: chr11:70304143-70303797 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 247
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 129, 81

Conread position: 158-430
Cow position: chr11:49231946-49231671 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 158, 124

Conread position: 167-578
Cow position: chr11:30120598-30121013 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 59

Conread position: 167-650
Cow position: chr11:25337129-25336650 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 119

Conread position: 168-533
Cow position: chr11:70273369-70272997 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 107

Conread position: 172-492
Cow position: chr11:24937724-24937394 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 228
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 154, 122

Conread position: 174-664
Cow position: chr11:4732399-4731904 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 95

Conread position: 177-668
Cow position: chr11:80787853-80788351 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 106

Conread position: 179-522
Cow position: chr11:65444791-65445132 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 224
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 310, 156

Conread position: 183-670
Cow position: chr11:39115541-39115061 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 24

Conread position: 184-483
Cow position: chr11:56728996-56728688 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 221
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 130, 111

Conread position: 184-695
Cow position: chr11:8827826-8827321 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 112

Conread position: 185-670
Cow position: chr11:21857009-21856519 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 146

Conread position: 190-670
Cow position: chr11:22931930-22932417 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 325
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 82, 208

Conread position: 195-668
Cow position: chr11:10076804-10076335 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 80

Conread position: 196-634
Cow position: chr11:27386304-27386745 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 197

Conread position: 199-670
Cow position: chr11:6154440-6153974 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 28

Conread position: 215-670
Cow position: chr11:16251228-16251697 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 155

Conread position: 215-670
Cow position: chr11:62979506-62979036 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 69

Conread position: 222-671
Cow position: chr11:66942955-66943400 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 82

Conread position: 227-512
Cow position: chr11:38194161-38193866 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 89, 192

Conread position: 227-636
Cow position: chr11:3303825-3303429 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 91

Conread position: 227-651
Cow position: chr11:4412018-4412442 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 71

Conread position: 230-670
Cow position: chr11:30110963-30110515 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 45

Conread position: 231-677
Cow position: chr11:31866600-31866148 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 44

Conread position: 232-668
Cow position: chr11:79994822-79995247 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 295
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 48, 55

Conread position: 239-670
Cow position: chr11:64334843-64334416 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 27

Conread position: 243-670
Cow position: chr11:4384607-4384189 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 32

Conread position: 245-694
Cow position: chr11:55117450-55117008 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 25

Conread position: 285-670
Cow position: chr11:19890810-19890443 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 20

Conread position: 285-670
Cow position: chr11:68570717-68571113 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 152

Conread position: 294-677
Cow position: chr11:33001932-33001551 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 119

Conread position: 300-562
Cow position: chr11:46451541-46451283 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 16, 112

Conread position: 317-670
Cow position: chr11:31885427-31885071 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 69

Conread position: 317-670
Cow position: chr11:31900955-31900607 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 82

Conread position: 317-670
Cow position: chr11:41577105-41577446 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 94

Conread position: 317-670
Cow position: chr11:62376527-62376878 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 45

Conread position: 318-670
Cow position: chr11:16795250-16795589 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 10

Conread position: 318-670
Cow position: chr11:37118397-37118034 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 95

Conread position: 320-670
Cow position: chr11:1267648-1267997 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 44

Conread position: 320-670
Cow position: chr11:26433406-26433053 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 240
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 29, 177

Conread position: 320-670
Cow position: chr11:68137052-68136701 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 46

Conread position: 321-668
Cow position: chr11:15500866-15501211 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 40

Conread position: 321-668
Cow position: chr11:41166836-41167184 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 24

Conread position: 321-668
Cow position: chr11:56145243-56144902 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 237
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 15, 40

Conread position: 322-666
Cow position: chr11:11991846-11991509 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 39

Conread position: 322-668
Cow position: chr11:31860783-31860435 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 12, 22

Conread position: 322-678
Cow position: chr11:12316182-12316539 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 39

Conread position: 322-679
Cow position: chr11:14259115-14259469 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 37

Conread position: 322-679
Cow position: chr11:32076237-32076591 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 39

Conread position: 322-679
Cow position: chr11:35737505-35737866 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 253
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 14, 39

Conread position: 324-668
Cow position: chr11:77750106-77749780 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 244
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 21, 40

Conread position: 324-679
Cow position: chr11:33600783-33601141 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 39

Conread position: 325-679
Cow position: chr11:5272725-5273079 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 36

Conread position: 330-669
Cow position: chr11:75510339-75510693 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 28

Conread position: 335-668
Cow position: chr11:8212665-8212337 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 233
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 88, 25

Conread position: 335-670
Cow position: chr11:41598838-41599180 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 23

Conread position: 335-679
Cow position: chr11:26121104-26121445 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 25

Conread position: 335-679
Cow position: chr11:30172261-30171918 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 246
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 97, 23

Conread position: 335-679
Cow position: chr11:51208304-51207974 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 241
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 86, 23

Conread position: 335-679
Cow position: chr11:54178647-54178991 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 8

Conread position: 337-676
Cow position: chr11:60515090-60515415 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 15

Conread position: 341-668
Cow position: chr11:24907761-24907443 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 227
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 82, 17

Conread position: 344-670
Cow position: chr11:10948590-10948913 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 79, 66

Conread position: 344-671
Cow position: chr11:30466739-30467053 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 81, 15

Conread position: 345-670
Cow position: chr11:2910944-2911253 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 346-668
Cow position: chr11:46780241-46780560 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 14

Conread position: 346-689
Cow position: chr11:4064272-4064602 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 238
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 14

Conread position: 347-679
Cow position: chr11:393927-393601 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 13

Conread position: 352-670
Cow position: chr11:39152549-39152246 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 36

Conread position: 352-678
Cow position: chr11:56751513-56751832 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 62

Conread position: 353-670
Cow position: chr11:62008978-62009293 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 224
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 70, 57

Conread position: 353-679
Cow position: chr11:53428009-53428337 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 54

Conread position: 358-694
Cow position: chr11:64048187-64047855 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 359-668
Cow position: chr11:17103893-17104196 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 59, 0

Conread position: 359-679
Cow position: chr11:36166943-36167262 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 227
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 75, 55

Conread position: 360-668
Cow position: chr11:80592157-80591850 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 41, 51

Conread position: 364-670
Cow position: chr11:7120162-7120466 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 46

Conread position: 376-670
Cow position: chr11:10044044-10043752 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 38

Conread position: 376-670
Cow position: chr11:50197594-50197885 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 34

Conread position: 376-690
Cow position: chr11:48659539-48659238 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 382-679
Cow position: chr11:1149552-1149250 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 41, 25

Conread position: 383-670
Cow position: chr11:12762407-12762690 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 7

Conread position: 383-677
Cow position: chr11:59959135-59959435 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 28

Conread position: 391-679
Cow position: chr11:61396836-61397125 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 211
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 32, 23

Conread position: 391-679
Cow position: chr11:62792667-62792387 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 279, 27

Conread position: 393-679
Cow position: chr11:18397951-18398236 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 214
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 30, 10

Conread position: 409-650
Cow position: chr11:35981605-35981843 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 82

Conread position: 409-679
Cow position: chr11:47596131-47595860 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 84

Conread position: 418-684
Cow position: chr11:19592327-19592588 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 69

Conread position: 433-670
Cow position: chr11:18591979-18592205 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 178
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 434-695
Cow position: chr11:75558254-75558504 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 200
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 100, 33

Conread position: 443-670
Cow position: chr11:21832185-21832407 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 467-679
Cow position: chr11:26118305-26118515 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 171
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 202, 14

Conread position: 470-670
Cow position: chr11:38071150-38070952 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 66

Conread position: 471-671
Cow position: chr11:9653795-9653988 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 19, 0

Conread position: 471-680
Cow position: chr11:6364565-6364773 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 199, 16

Conread position: 472-679
Cow position: chr11:13067764-13067970 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 170
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 20, 9

Conread position: 472-679
Cow position: chr11:13162233-13162027 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 170
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 20, 9

Conread position: 474-668
Cow position: chr11:56889159-56889349 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 16, 0

Conread position: 481-670
Cow position: chr11:62239230-62239041 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 8, 124

Conread position: 489-670
Cow position: chr11:34830259-34830439 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 144
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 163, 127

Conread position: 491-681
Cow position: chr11:37564466-37564653 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 90, 28

Conread position: 494-668
Cow position: chr11:45647103-45647277 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 89, 119

Conread position: 498-670
Cow position: chr11:83043880-83044049 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 501-679
Cow position: chr11:49098975-49099155 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 169, 106

Conread position: 502-670
Cow position: chr11:17514819-17514652 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 14, 115

Conread position: 504-669
Cow position: chr11:42003274-42003439 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 114

Conread position: 504-670
Cow position: chr11:11124857-11124694 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 147, 49

Conread position: 504-670
Cow position: chr11:41176911-41177074 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 135
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 105, 0

Conread position: 504-677
Cow position: chr11:21984155-21983982 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 166, 12

Conread position: 506-667
Cow position: chr11:38831694-38831853 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 102, 0

Conread position: 506-668
Cow position: chr11:81300961-81301119 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 63, 0

Conread position: 508-670
Cow position: chr11:17036863-17037025 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 133, 115

Conread position: 509-663
Cow position: chr11:63518690-63518538 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 101, 0

Conread position: 509-679
Cow position: chr11:8713981-8713810 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 161, 107

Conread position: 510-677
Cow position: chr11:40300105-40300272 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 162, 98

Conread position: 513-670
Cow position: chr11:25165117-25164962 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 513-670
Cow position: chr11:70639474-70639320 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 518-671
Cow position: chr11:40609048-40609198 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 520-671
Cow position: chr11:2962864-2962717 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 131, 33

Conread position: 522-670
Cow position: chr11:10149701-10149847 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 527-641
Cow position: chr11:44111105-44111217 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 527-670
Cow position: chr11:14470150-14470008 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 84

Conread position: 538-670
Cow position: chr11:83323288-83323159 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 538-679
Cow position: chr11:11592625-11592483 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 132, 73

Conread position: 546-670
Cow position: chr11:47608039-47607918 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 555-679
Cow position: chr11:39140913-39140789 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 103, 63

Show alignments to all cow chromosomes.