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Cow genome map

           
Conread name:
           
Mixn-0035g19
        

               
Conread position:
               
9-128
               

               
Cow position:
               
chr13:20271454-20271337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
110, 15
               

               
Conread position:
               
9-231
               

               
Cow position:
               
chr13:7702367-7702161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
9-235
               

               
Cow position:
               
chr13:21192853-21193066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
158, 32
               

               
Conread position:
               
9-246
               

               
Cow position:
               
chr13:39398406-39398634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
38, 79
               

               
Conread position:
               
9-280
               

               
Cow position:
               
chr13:37621597-37621342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
9-333
               

               
Cow position:
               
chr13:25380720-25381027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
38, 79
               

               
Conread position:
               
9-365
               

               
Cow position:
               
chr13:55727636-55728011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
36, 134
               

               
Conread position:
               
9-449
               

               
Cow position:
               
chr13:21283962-21283515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 10
               

               
Conread position:
               
9-479
               

               
Cow position:
               
chr13:20679090-20679566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
38, 30
               

               
Conread position:
               
9-513
               

               
Cow position:
               
chr13:45023447-45022955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 79
               

               
Conread position:
               
9-560
               

               
Cow position:
               
chr13:9266073-9265512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
10-191
               

               
Cow position:
               
chr13:3948251-3948431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
37, 78
               

               
Conread position:
               
11-138
               

               
Cow position:
               
chr13:45142158-45142036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 73
               

               
Conread position:
               
11-668
               

               
Cow position:
               
chr13:34037331-34037972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 78
               

               
Conread position:
               
11-670
               

               
Cow position:
               
chr13:20684373-20683718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 78
               

               
Conread position:
               
13-122
               

               
Cow position:
               
chr13:372631-372522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
13-246
               

               
Cow position:
               
chr13:11532442-11532671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
34, 73
               

               
Conread position:
               
13-246
               

               
Cow position:
               
chr13:11538586-11538815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
34, 73
               

               
Conread position:
               
13-428
               

               
Cow position:
               
chr13:4420081-4420517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
21, 152
               

               
Conread position:
               
13-503
               

               
Cow position:
               
chr13:20706446-20705960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
14-216
               

               
Cow position:
               
chr13:53309373-53309173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
33, 75
               

               
Conread position:
               
14-243
               

               
Cow position:
               
chr13:32387260-32387022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
14-600
               

               
Cow position:
               
chr13:45604657-45604072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
14-670
               

               
Cow position:
               
chr13:8609789-8609153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
14-695
               

               
Cow position:
               
chr13:37517406-37516711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 34
               

               
Conread position:
               
15-212
               

               
Cow position:
               
chr13:17229482-17229666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 75
               

               
Conread position:
               
17-403
               

               
Cow position:
               
chr13:18696607-18696989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
17-500
               

               
Cow position:
               
chr13:13176381-13176889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 281
               

               
Conread position:
               
17-502
               

               
Cow position:
               
chr13:7076024-7076498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
19-404
               

               
Cow position:
               
chr13:39367707-39368103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 24
               

               
Conread position:
               
19-441
               

               
Cow position:
               
chr13:11643698-11644116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 19
               

               
Conread position:
               
20-204
               

               
Cow position:
               
chr13:4980801-4980988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
27, 107
               

               
Conread position:
               
20-204
               

               
Cow position:
               
chr13:57995105-57995287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
20-211
               

               
Cow position:
               
chr13:26365654-26365853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
20-218
               

               
Cow position:
               
chr13:4718984-4719179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
20-282
               

               
Cow position:
               
chr13:6183644-6183401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
20-479
               

               
Cow position:
               
chr13:13466007-13465569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 44
               

               
Conread position:
               
20-485
               

               
Cow position:
               
chr13:55316436-55315962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 146
               

               
Conread position:
               
20-668
               

               
Cow position:
               
chr13:185292-185916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 68
               

               
Conread position:
               
20-670
               

               
Cow position:
               
chr13:20440831-20440193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 87
               

               
Conread position:
               
21-189
               

               
Cow position:
               
chr13:37021241-37021070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
22-574
               

               
Cow position:
               
chr13:37381563-37382125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
23-236
               

               
Cow position:
               
chr13:20531706-20531501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
24, 65
               

               
Conread position:
               
23-273
               

               
Cow position:
               
chr13:19750487-19750725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
175, 25
               

               
Conread position:
               
24-218
               

               
Cow position:
               
chr13:27419299-27419121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
24-236
               

               
Cow position:
               
chr13:29631379-29631581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
24-267
               

               
Cow position:
               
chr13:8567488-8567740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 241
               

               
Conread position:
               
24-273
               

               
Cow position:
               
chr13:13181959-13182204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
62, 108
               

               
Conread position:
               
24-279
               

               
Cow position:
               
chr13:25450724-25450470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
23, 65
               

               
Conread position:
               
24-286
               

               
Cow position:
               
chr13:51814180-51813914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 155
               

               
Conread position:
               
24-314
               

               
Cow position:
               
chr13:3211301-3211599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
23, 267
               

               
Conread position:
               
24-395
               

               
Cow position:
               
chr13:51116265-51115889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 95
               

               
Conread position:
               
24-474
               

               
Cow position:
               
chr13:37803670-37804095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
23, 62
               

               
Conread position:
               
24-670
               

               
Cow position:
               
chr13:52586271-52585617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
25-278
               

               
Cow position:
               
chr13:5005774-5006012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
26-303
               

               
Cow position:
               
chr13:9117809-9117533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
28-333
               

               
Cow position:
               
chr13:17563514-17563803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 58
               

               
Conread position:
               
29-447
               

               
Cow position:
               
chr13:14771215-14771650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 10
               

               
Conread position:
               
29-565
               

               
Cow position:
               
chr13:23167322-23166791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 12
               

               
Conread position:
               
31-670
               

               
Cow position:
               
chr13:2413801-2414432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 52
               

               
Conread position:
               
32-212
               

               
Cow position:
               
chr13:56300069-56299908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
50-477
               

               
Cow position:
               
chr13:18172131-18172559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 33
               

               
Conread position:
               
50-619
               

               
Cow position:
               
chr13:1043176-1042597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 83
               

               
Conread position:
               
52-246
               

               
Cow position:
               
chr13:1075257-1075056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
52-315
               

               
Cow position:
               
chr13:43829026-43829293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
28, 225
               

               
Conread position:
               
54-695
               

               
Cow position:
               
chr13:60509329-60508694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 59
               

               
Conread position:
               
56-572
               

               
Cow position:
               
chr13:56148306-56148852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 236
               

               
Conread position:
               
56-572
               

               
Cow position:
               
chr13:56160661-56160115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 236
               

               
Conread position:
               
59-621
               

               
Cow position:
               
chr13:17159082-17158503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 54
               

               
Conread position:
               
62-459
               

               
Cow position:
               
chr13:547297-547689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
172, 19
               

               
Conread position:
               
65-278
               

               
Cow position:
               
chr13:24215868-24215658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 13
               

               
Conread position:
               
65-670
               

               
Cow position:
               
chr13:45352834-45353438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
67-670
               

               
Cow position:
               
chr13:46181601-46182181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 16
               

               
Conread position:
               
70-492
               

               
Cow position:
               
chr13:10925112-10924671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 43
               

               
Conread position:
               
70-510
               

               
Cow position:
               
chr13:23960996-23960556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
73-280
               

               
Cow position:
               
chr13:44003511-44003716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
73-649
               

               
Cow position:
               
chr13:46515871-46516449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
74-457
               

               
Cow position:
               
chr13:26369336-26369725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 56
               

               
Conread position:
               
75-222
               

               
Cow position:
               
chr13:17624136-17624281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 37
               

               
Conread position:
               
75-262
               

               
Cow position:
               
chr13:30315317-30315506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 57
               

               
Conread position:
               
75-276
               

               
Cow position:
               
chr13:15993200-15993399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 37
               

               
Conread position:
               
75-322
               

               
Cow position:
               
chr13:54128781-54128537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
75-324
               

               
Cow position:
               
chr13:25579377-25579130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
75-333
               

               
Cow position:
               
chr13:42672613-42672355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
75-359
               

               
Cow position:
               
chr13:620431-620156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
75-441
               

               
Cow position:
               
chr13:49503721-49503345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 62
               

               
Conread position:
               
75-452
               

               
Cow position:
               
chr13:52055776-52055398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
12, 55
               

               
Conread position:
               
75-460
               

               
Cow position:
               
chr13:19223468-19223851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
75-530
               

               
Cow position:
               
chr13:32282941-32283397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 37
               

               
Conread position:
               
75-605
               

               
Cow position:
               
chr13:8362930-8362401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
75-635
               

               
Cow position:
               
chr13:12670635-12670084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 54
               

               
Conread position:
               
75-650
               

               
Cow position:
               
chr13:15868926-15869506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 57
               

               
Conread position:
               
78-236
               

               
Cow position:
               
chr13:13796997-13796838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 54
               

               
Conread position:
               
78-245
               

               
Cow position:
               
chr13:11146873-11147039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 34
               

               
Conread position:
               
78-333
               

               
Cow position:
               
chr13:20137637-20137891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
78-359
               

               
Cow position:
               
chr13:18929345-18929632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
78-601
               

               
Cow position:
               
chr13:32017696-32017182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
79-427
               

               
Cow position:
               
chr13:49823845-49824193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
182, 32
               

               
Conread position:
               
81-246
               

               
Cow position:
               
chr13:3153570-3153733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
83-246
               

               
Cow position:
               
chr13:6608569-6608399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
83-279
               

               
Cow position:
               
chr13:47676111-47675919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
83-458
               

               
Cow position:
               
chr13:24230035-24230413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
20, 49
               

               
Conread position:
               
85-223
               

               
Cow position:
               
chr13:15808591-15808726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
25, 14
               

               
Conread position:
               
85-670
               

               
Cow position:
               
chr13:36771598-36771014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 87
               

               
Conread position:
               
86-636
               

               
Cow position:
               
chr13:51940559-51941103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 5
               

               
Conread position:
               
86-670
               

               
Cow position:
               
chr13:10929163-10928584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 36
               

               
Conread position:
               
91-404
               

               
Cow position:
               
chr13:37640421-37640734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
234, 37
               

               
Conread position:
               
91-479
               

               
Cow position:
               
chr13:43869279-43868897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
218, 45
               

               
Conread position:
               
92-623
               

               
Cow position:
               
chr13:40651764-40652294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 38
               

               
Conread position:
               
93-679
               

               
Cow position:
               
chr13:60430247-60429662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
96-280
               

               
Cow position:
               
chr13:26889056-26889239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 35
               

               
Conread position:
               
96-552
               

               
Cow position:
               
chr13:43194002-43194464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
24, 5
               

               
Conread position:
               
99-278
               

               
Cow position:
               
chr13:42640224-42640397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
101-512
               

               
Cow position:
               
chr13:3315836-3315421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 30
               

               
Conread position:
               
101-635
               

               
Cow position:
               
chr13:30798563-30799095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 28
               

               
Conread position:
               
102-553
               

               
Cow position:
               
chr13:38873104-38872682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
103-259
               

               
Cow position:
               
chr13:21294916-21295071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
103-357
               

               
Cow position:
               
chr13:53330113-53330369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 28
               

               
Conread position:
               
103-459
               

               
Cow position:
               
chr13:59170497-59170858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
5, 21
               

               
Conread position:
               
103-638
               

               
Cow position:
               
chr13:20820984-20820462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 28
               

               
Conread position:
               
103-670
               

               
Cow position:
               
chr13:51901425-51902025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 25
               

               
Conread position:
               
104-363
               

               
Cow position:
               
chr13:43893482-43893224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
72, 167
               

               
Conread position:
               
104-405
               

               
Cow position:
               
chr13:9900001-9900298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
212, 27
               

               
Conread position:
               
104-504
               

               
Cow position:
               
chr13:5279360-5278944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
96, 27
               

               
Conread position:
               
104-508
               

               
Cow position:
               
chr13:37069187-37069597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 27
               

               
Conread position:
               
104-675
               

               
Cow position:
               
chr13:23856053-23856651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 27
               

               
Conread position:
               
107-302
               

               
Cow position:
               
chr13:41157250-41157440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
108-492
               

               
Cow position:
               
chr13:25547736-25547358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
208, 22
               

               
Conread position:
               
108-548
               

               
Cow position:
               
chr13:12574478-12574922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 160
               

               
Conread position:
               
109-234
               

               
Cow position:
               
chr13:25521069-25520944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-333
               

               
Cow position:
               
chr13:55162057-55162278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 160
               

               
Conread position:
               
110-372
               

               
Cow position:
               
chr13:14576061-14576322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
190, 21
               

               
Conread position:
               
110-482
               

               
Cow position:
               
chr13:43919414-43919031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
224, 160
               

               
Conread position:
               
111-246
               

               
Cow position:
               
chr13:53865485-53865619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
111-247
               

               
Cow position:
               
chr13:8637547-8637682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
111-261
               

               
Cow position:
               
chr13:14411744-14411893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 19
               

               
Conread position:
               
111-262
               

               
Cow position:
               
chr13:18615231-18615383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
85, 20
               

               
Conread position:
               
111-278
               

               
Cow position:
               
chr13:2776137-2776303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
111-280
               

               
Cow position:
               
chr13:28071722-28071890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
111, 19
               

               
Conread position:
               
111-309
               

               
Cow position:
               
chr13:34873438-34873633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
111-310
               

               
Cow position:
               
chr13:20288501-20288698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
91, 18
               

               
Conread position:
               
111-313
               

               
Cow position:
               
chr13:48554215-48554420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
159, 19
               

               
Conread position:
               
111-314
               

               
Cow position:
               
chr13:52641099-52640902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
111-324
               

               
Cow position:
               
chr13:12925628-12925831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
111-329
               

               
Cow position:
               
chr13:52459631-52459418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
203, 20
               

               
Conread position:
               
111-333
               

               
Cow position:
               
chr13:18994975-18995193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
130, 19
               

               
Conread position:
               
111-339
               

               
Cow position:
               
chr13:8667468-8667694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
137, 19
               

               
Conread position:
               
111-354
               

               
Cow position:
               
chr13:21127489-21127244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
111-373
               

               
Cow position:
               
chr13:10220810-10221066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
215, 20
               

               
Conread position:
               
111-399
               

               
Cow position:
               
chr13:20360128-20360413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
205, 20
               

               
Conread position:
               
111-404
               

               
Cow position:
               
chr13:18999384-18999690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
175, 19
               

               
Conread position:
               
111-460
               

               
Cow position:
               
chr13:37593098-37592736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 18
               

               
Conread position:
               
111-510
               

               
Cow position:
               
chr13:37985895-37985501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
158, 18
               

               
Conread position:
               
111-526
               

               
Cow position:
               
chr13:15041622-15041206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 19
               

               
Conread position:
               
111-544
               

               
Cow position:
               
chr13:37521893-37521451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
193, 20
               

               
Conread position:
               
111-623
               

               
Cow position:
               
chr13:21275708-21276217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 20
               

               
Conread position:
               
111-637
               

               
Cow position:
               
chr13:12876123-12875609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 19
               

               
Conread position:
               
111-670
               

               
Cow position:
               
chr13:52893998-52894535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 19
               

               
Conread position:
               
111-677
               

               
Cow position:
               
chr13:15872290-15872865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 23
               

               
Conread position:
               
111-679
               

               
Cow position:
               
chr13:33256350-33256937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 18
               

               
Conread position:
               
111-682
               

               
Cow position:
               
chr13:16247497-16248079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 36
               

               
Conread position:
               
112-267
               

               
Cow position:
               
chr13:17813321-17813475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
112-324
               

               
Cow position:
               
chr13:17837801-17838007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
112-386
               

               
Cow position:
               
chr13:17338279-17338568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
166, 18
               

               
Conread position:
               
112-389
               

               
Cow position:
               
chr13:14879101-14878819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
176, 18
               

               
Conread position:
               
112-403
               

               
Cow position:
               
chr13:1363544-1363841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
200, 18
               

               
Conread position:
               
112-404
               

               
Cow position:
               
chr13:2822719-2823007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
214, 152
               

               
Conread position:
               
112-428
               

               
Cow position:
               
chr13:28689318-28689637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
202, 18
               

               
Conread position:
               
112-434
               

               
Cow position:
               
chr13:607409-607085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
112-472
               

               
Cow position:
               
chr13:53195428-53195078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
152, 18
               

               
Conread position:
               
112-526
               

               
Cow position:
               
chr13:18166584-18166996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 19
               

               
Conread position:
               
112-532
               

               
Cow position:
               
chr13:19023998-19023567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 18
               

               
Conread position:
               
112-664
               

               
Cow position:
               
chr13:3143099-3143640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 18
               

               
Conread position:
               
112-668
               

               
Cow position:
               
chr13:12977430-12977961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 18
               

               
Conread position:
               
112-670
               

               
Cow position:
               
chr13:1155853-1155300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 18
               

               
Conread position:
               
112-670
               

               
Cow position:
               
chr13:12045492-12044933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 17
               

               
Conread position:
               
112-677
               

               
Cow position:
               
chr13:33875526-33876081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 18
               

               
Conread position:
               
112-679
               

               
Cow position:
               
chr13:8203016-8202472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 18
               

               
Conread position:
               
112-679
               

               
Cow position:
               
chr13:20893790-20893220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
113-252
               

               
Cow position:
               
chr13:24094464-24094328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
113-261
               

               
Cow position:
               
chr13:48222697-48222550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
113-284
               

               
Cow position:
               
chr13:52934278-52934448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
113-338
               

               
Cow position:
               
chr13:37503732-37503510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
83, 17
               

               
Conread position:
               
113-460
               

               
Cow position:
               
chr13:15282083-15281734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
215, 18
               

               
Conread position:
               
113-464
               

               
Cow position:
               
chr13:46111822-46112173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
256, 18
               

               
Conread position:
               
113-472
               

               
Cow position:
               
chr13:15257516-15257164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
201, 17
               

               
Conread position:
               
113-554
               

               
Cow position:
               
chr13:51822021-51821594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 18
               

               
Conread position:
               
113-668
               

               
Cow position:
               
chr13:42113870-42114416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 17
               

               
Conread position:
               
113-670
               

               
Cow position:
               
chr13:20174591-20175147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 177
               

               
Conread position:
               
113-670
               

               
Cow position:
               
chr13:20378469-20377934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 22
               

               
Conread position:
               
113-670
               

               
Cow position:
               
chr13:51528591-51528039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 17
               

               
Conread position:
               
113-679
               

               
Cow position:
               
chr13:20879972-20879416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 22
               

               
Conread position:
               
113-679
               

               
Cow position:
               
chr13:50690548-50689972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 178
               

               
Conread position:
               
114-276
               

               
Cow position:
               
chr13:3149579-3149420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
114-349
               

               
Cow position:
               
chr13:62007959-62008193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
166, 17
               

               
Conread position:
               
114-470
               

               
Cow position:
               
chr13:60340661-60341026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
106, 16
               

               
Conread position:
               
114-668
               

               
Cow position:
               
chr13:58043479-58044034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 311
               

               
Conread position:
               
115-276
               

               
Cow position:
               
chr13:49356194-49356035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
155, 13
               

               
Conread position:
               
115-459
               

               
Cow position:
               
chr13:48597762-48598105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
106, 15
               

               
Conread position:
               
115-522
               

               
Cow position:
               
chr13:19393145-19393547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
201, 16
               

               
Conread position:
               
115-577
               

               
Cow position:
               
chr13:44201862-44202306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 26
               

               
Conread position:
               
115-585
               

               
Cow position:
               
chr13:2883912-2884375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 172
               

               
Conread position:
               
115-626
               

               
Cow position:
               
chr13:13320650-13321141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 16
               

               
Conread position:
               
115-647
               

               
Cow position:
               
chr13:41806625-41807152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 15
               

               
Conread position:
               
115-670
               

               
Cow position:
               
chr13:972044-971488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 15
               

               
Conread position:
               
115-670
               

               
Cow position:
               
chr13:6974015-6974579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 16
               

               
Conread position:
               
115-670
               

               
Cow position:
               
chr13:20666533-20665983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 16
               

               
Conread position:
               
115-670
               

               
Cow position:
               
chr13:38284126-38283576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 15
               

               
Conread position:
               
116-310
               

               
Cow position:
               
chr13:15984862-15985054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
105, 14
               

               
Conread position:
               
116-401
               

               
Cow position:
               
chr13:49520969-49520677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
108, 142
               

               
Conread position:
               
116-438
               

               
Cow position:
               
chr13:39232969-39232659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
225, 14
               

               
Conread position:
               
116-539
               

               
Cow position:
               
chr13:61047068-61047485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 14
               

               
Conread position:
               
116-651
               

               
Cow position:
               
chr13:42860716-42860184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 14
               

               
Conread position:
               
116-679
               

               
Cow position:
               
chr13:12547054-12546486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 14
               

               
Conread position:
               
116-694
               

               
Cow position:
               
chr13:6616905-6616316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
117-248
               

               
Cow position:
               
chr13:9124781-9124909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
117-252
               

               
Cow position:
               
chr13:30148708-30148574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
117-278
               

               
Cow position:
               
chr13:55765323-55765163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
117-324
               

               
Cow position:
               
chr13:17823095-17822893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
166, 14
               

               
Conread position:
               
117-423
               

               
Cow position:
               
chr13:20579767-20580071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
181, 14
               

               
Conread position:
               
117-478
               

               
Cow position:
               
chr13:18491451-18491814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
161, 14
               

               
Conread position:
               
117-479
               

               
Cow position:
               
chr13:5263426-5263065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 14
               

               
Conread position:
               
117-510
               

               
Cow position:
               
chr13:42200473-42200868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 166
               

               
Conread position:
               
117-512
               

               
Cow position:
               
chr13:14063668-14063276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
117-533
               

               
Cow position:
               
chr13:60966624-60967037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 12
               

               
Conread position:
               
117-600
               

               
Cow position:
               
chr13:40491069-40491581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
117-668
               

               
Cow position:
               
chr13:52057410-52057944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
117-679
               

               
Cow position:
               
chr13:15445902-15446462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 12
               

               
Conread position:
               
118-344
               

               
Cow position:
               
chr13:24110336-24110560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
152, 13
               

               
Conread position:
               
118-669
               

               
Cow position:
               
chr13:4552675-4553202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 22
               

               
Conread position:
               
118-669
               

               
Cow position:
               
chr13:34556458-34555941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 12
               

               
Conread position:
               
118-677
               

               
Cow position:
               
chr13:46324931-46324373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 12
               

               
Conread position:
               
119-236
               

               
Cow position:
               
chr13:16163439-16163555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
119-333
               

               
Cow position:
               
chr13:13533807-13533603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
142, 12
               

               
Conread position:
               
119-333
               

               
Cow position:
               
chr13:56035002-56034792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
196, 11
               

               
Conread position:
               
119-440
               

               
Cow position:
               
chr13:19188158-19188486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
197, 11
               

               
Conread position:
               
119-670
               

               
Cow position:
               
chr13:37484422-37483856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 12
               

               
Conread position:
               
121-638
               

               
Cow position:
               
chr13:18835061-18835562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
123-669
               

               
Cow position:
               
chr13:56686294-56686838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 90
               

               
Conread position:
               
126-679
               

               
Cow position:
               
chr13:13260867-13261435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
128-512
               

               
Cow position:
               
chr13:48037488-48037878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
186, 85
               

               
Conread position:
               
128-672
               

               
Cow position:
               
chr13:20650117-20649578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
129-273
               

               
Cow position:
               
chr13:45593787-45593929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
135, 70
               

               
Conread position:
               
129-665
               

               
Cow position:
               
chr13:12989717-12990247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
129-670
               

               
Cow position:
               
chr13:311304-311840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 89
               

               
Conread position:
               
130-372
               

               
Cow position:
               
chr13:27550606-27550855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
184, 165
               

               
Conread position:
               
130-422
               

               
Cow position:
               
chr13:54582741-54583042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
148, 65
               

               
Conread position:
               
130-441
               

               
Cow position:
               
chr13:55583065-55583382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
186, 11
               

               
Conread position:
               
130-461
               

               
Cow position:
               
chr13:52749603-52749285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
186, 91
               

               
Conread position:
               
130-465
               

               
Cow position:
               
chr13:13338723-13339071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
147, 156
               

               
Conread position:
               
130-472
               

               
Cow position:
               
chr13:52228233-52227886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
180, 133
               

               
Conread position:
               
130-487
               

               
Cow position:
               
chr13:21242217-21241863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
43, 29
               

               
Conread position:
               
130-560
               

               
Cow position:
               
chr13:25817394-25817813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 74
               

               
Conread position:
               
130-614
               

               
Cow position:
               
chr13:17613212-17613700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 34
               

               
Conread position:
               
130-634
               

               
Cow position:
               
chr13:9975209-9974694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 43
               

               
Conread position:
               
130-670
               

               
Cow position:
               
chr13:25926657-25927221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 153
               

               
Conread position:
               
130-679
               

               
Cow position:
               
chr13:56155284-56154747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 29
               

               
Conread position:
               
131-436
               

               
Cow position:
               
chr13:20231322-20231022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 63
               

               
Conread position:
               
131-483
               

               
Cow position:
               
chr13:15193018-15192669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
185, 89
               

               
Conread position:
               
131-509
               

               
Cow position:
               
chr13:24715109-24715486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
90, 151
               

               
Conread position:
               
131-597
               

               
Cow position:
               
chr13:13088898-13089363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 20
               

               
Conread position:
               
131-607
               

               
Cow position:
               
chr13:15289053-15288585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 90
               

               
Conread position:
               
131-634
               

               
Cow position:
               
chr13:38329484-38330004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 171
               

               
Conread position:
               
131-670
               

               
Cow position:
               
chr13:16014679-16015223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 146
               

               
Conread position:
               
131-670
               

               
Cow position:
               
chr13:40722839-40722276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 294
               

               
Conread position:
               
131-670
               

               
Cow position:
               
chr13:43762037-43762579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 16
               

               
Conread position:
               
132-448
               

               
Cow position:
               
chr13:15195334-15195019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
184, 22
               

               
Conread position:
               
132-487
               

               
Cow position:
               
chr13:23667122-23667491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
186, 126
               

               
Conread position:
               
132-487
               

               
Cow position:
               
chr13:43185010-43184643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 10
               

               
Conread position:
               
132-508
               

               
Cow position:
               
chr13:11460502-11460871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
180, 134
               

               
Conread position:
               
132-508
               

               
Cow position:
               
chr13:13501748-13501374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
194, 22
               

               
Conread position:
               
132-512
               

               
Cow position:
               
chr13:23478899-23479281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 96
               

               
Conread position:
               
132-668
               

               
Cow position:
               
chr13:12408418-12407878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 12
               

               
Conread position:
               
133-314
               

               
Cow position:
               
chr13:19778983-19778801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
103, 134
               

               
Conread position:
               
133-489
               

               
Cow position:
               
chr13:11060857-11061218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
50, 174
               

               
Conread position:
               
133-503
               

               
Cow position:
               
chr13:55674338-55673962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
52, 26
               

               
Conread position:
               
133-612
               

               
Cow position:
               
chr13:21176449-21175971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 26
               

               
Conread position:
               
134-404
               

               
Cow position:
               
chr13:6442234-6441952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
136, 87
               

               
Conread position:
               
135-423
               

               
Cow position:
               
chr13:20473811-20473525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 132
               

               
Conread position:
               
135-514
               

               
Cow position:
               
chr13:20784462-20784842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 292
               

               
Conread position:
               
135-594
               

               
Cow position:
               
chr13:37981872-37981418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 74
               

               
Conread position:
               
135-669
               

               
Cow position:
               
chr13:25435251-25434723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 51
               

               
Conread position:
               
135-670
               

               
Cow position:
               
chr13:57770114-57769617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
147, 79
               

               
Conread position:
               
135-677
               

               
Cow position:
               
chr13:24753759-24754308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 91
               

               
Conread position:
               
135-680
               

               
Cow position:
               
chr13:31813747-31814280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 133
               

               
Conread position:
               
135-682
               

               
Cow position:
               
chr13:19883164-19882616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
135-695
               

               
Cow position:
               
chr13:25695895-25695342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 54
               

               
Conread position:
               
136-534
               

               
Cow position:
               
chr13:6079539-6079145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
210, 134
               

               
Conread position:
               
137-439
               

               
Cow position:
               
chr13:5758469-5758164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
20, 147
               

               
Conread position:
               
140-455
               

               
Cow position:
               
chr13:8652566-8652240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 240
               

               
Conread position:
               
140-460
               

               
Cow position:
               
chr13:9593383-9593709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
176, 19
               

               
Conread position:
               
140-477
               

               
Cow position:
               
chr13:45074037-45073716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
198, 74
               

               
Conread position:
               
141-487
               

               
Cow position:
               
chr13:8524745-8524392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 139
               

               
Conread position:
               
142-423
               

               
Cow position:
               
chr13:15902903-15903179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
184, 141
               

               
Conread position:
               
142-508
               

               
Cow position:
               
chr13:15974496-15974858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 107
               

               
Conread position:
               
143-597
               

               
Cow position:
               
chr13:43139334-43138892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 71
               

               
Conread position:
               
143-600
               

               
Cow position:
               
chr13:890293-889844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 86
               

               
Conread position:
               
143-628
               

               
Cow position:
               
chr13:151843-152308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 118
               

               
Conread position:
               
143-670
               

               
Cow position:
               
chr13:20562873-20563399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 147
               

               
Conread position:
               
143-671
               

               
Cow position:
               
chr13:46736095-46736624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 132
               

               
Conread position:
               
144-479
               

               
Cow position:
               
chr13:10845485-10845814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
168, 65
               

               
Conread position:
               
144-679
               

               
Cow position:
               
chr13:20570616-20571146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 33
               

               
Conread position:
               
144-679
               

               
Cow position:
               
chr13:22085865-22085339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 150
               

               
Conread position:
               
147-671
               

               
Cow position:
               
chr13:49804861-49805376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 50
               

               
Conread position:
               
148-479
               

               
Cow position:
               
chr13:33054488-33054174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
184, 142
               

               
Conread position:
               
148-592
               

               
Cow position:
               
chr13:17622173-17622616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 127
               

               
Conread position:
               
151-670
               

               
Cow position:
               
chr13:25531902-25531382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 75
               

               
Conread position:
               
152-425
               

               
Cow position:
               
chr13:13238466-13238745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
136, 34
               

               
Conread position:
               
154-508
               

               
Cow position:
               
chr13:8201592-8201237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
155-404
               

               
Cow position:
               
chr13:29831535-29831285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
133, 17
               

               
Conread position:
               
157-457
               

               
Cow position:
               
chr13:23512264-23512558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
159, 98
               

               
Conread position:
               
166-399
               

               
Cow position:
               
chr13:52929614-52929852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
146, 107
               

               
Conread position:
               
169-595
               

               
Cow position:
               
chr13:19138346-19138772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 117
               

               
Conread position:
               
170-679
               

               
Cow position:
               
chr13:34941743-34941237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 132
               

               
Conread position:
               
172-664
               

               
Cow position:
               
chr13:47007810-47007338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 90
               

               
Conread position:
               
179-436
               

               
Cow position:
               
chr13:49022952-49022692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
162, 103
               

               
Conread position:
               
184-668
               

               
Cow position:
               
chr13:31808442-31808919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 54
               

               
Conread position:
               
186-669
               

               
Cow position:
               
chr13:36353034-36352582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
82, 72
               

               
Conread position:
               
191-679
               

               
Cow position:
               
chr13:41253549-41254046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
125, 84
               

               
Conread position:
               
215-679
               

               
Cow position:
               
chr13:21231549-21231083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 23
               

               
Conread position:
               
226-670
               

               
Cow position:
               
chr13:61170755-61170317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 54
               

               
Conread position:
               
227-491
               

               
Cow position:
               
chr13:30026073-30026347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
59, 48
               

               
Conread position:
               
227-670
               

               
Cow position:
               
chr13:1011295-1011740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 80
               

               
Conread position:
               
227-670
               

               
Cow position:
               
chr13:18215408-18215838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 39
               

               
Conread position:
               
228-670
               

               
Cow position:
               
chr13:47312882-47313304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
64, 128
               

               
Conread position:
               
234-670
               

               
Cow position:
               
chr13:22775327-22774892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
244-487
               

               
Cow position:
               
chr13:9884748-9884997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
67, 38
               

               
Conread position:
               
266-670
               

               
Cow position:
               
chr13:54237356-54237745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 19
               

               
Conread position:
               
270-670
               

               
Cow position:
               
chr13:5175568-5175975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 5
               

               
Conread position:
               
287-669
               

               
Cow position:
               
chr13:26098180-26098549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
300-679
               

               
Cow position:
               
chr13:51484161-51483782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 42
               

               
Conread position:
               
301-675
               

               
Cow position:
               
chr13:20537634-20537996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 34
               

               
Conread position:
               
303-679
               

               
Cow position:
               
chr13:18329176-18329554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 40
               

               
Conread position:
               
312-650
               

               
Cow position:
               
chr13:6606969-6606632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 111
               

               
Conread position:
               
317-509
               

               
Cow position:
               
chr13:38012414-38012610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
29, 96
               

               
Conread position:
               
317-562
               

               
Cow position:
               
chr13:15740122-15740365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
20, 98
               

               
Conread position:
               
317-670
               

               
Cow position:
               
chr13:3701497-3701839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 61
               

               
Conread position:
               
317-670
               

               
Cow position:
               
chr13:20863955-20863614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 42
               

               
Conread position:
               
320-670
               

               
Cow position:
               
chr13:35541335-35540984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 97
               

               
Conread position:
               
320-679
               

               
Cow position:
               
chr13:27027713-27027358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 95
               

               
Conread position:
               
320-679
               

               
Cow position:
               
chr13:30793878-30794240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 44
               

               
Conread position:
               
320-679
               

               
Cow position:
               
chr13:43106582-43106945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 93
               

               
Conread position:
               
322-668
               

               
Cow position:
               
chr13:60879833-60879497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
324-668
               

               
Cow position:
               
chr13:4945329-4944984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
324-668
               

               
Cow position:
               
chr13:19426627-19426292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
324-670
               

               
Cow position:
               
chr13:35761503-35761161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
25, 89
               

               
Conread position:
               
324-694
               

               
Cow position:
               
chr13:18534372-18534002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 89
               

               
Conread position:
               
327-679
               

               
Cow position:
               
chr13:15281210-15280859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 7
               

               
Conread position:
               
334-668
               

               
Cow position:
               
chr13:25412755-25413084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
89, 18
               

               
Conread position:
               
335-668
               

               
Cow position:
               
chr13:32755159-32754835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
335-668
               

               
Cow position:
               
chr13:33163133-33162803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 25
               

               
Conread position:
               
335-670
               

               
Cow position:
               
chr13:3003522-3003852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 74
               

               
Conread position:
               
335-679
               

               
Cow position:
               
chr13:33467336-33466991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
98, 25
               

               
Conread position:
               
335-679
               

               
Cow position:
               
chr13:55372085-55371741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 25
               

               
Conread position:
               
338-679
               

               
Cow position:
               
chr13:62019013-62018667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
152, 87
               

               
Conread position:
               
346-667
               

               
Cow position:
               
chr13:23682654-23682345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
353-668
               

               
Cow position:
               
chr13:30307309-30306999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 65
               

               
Conread position:
               
353-678
               

               
Cow position:
               
chr13:3162590-3162916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 106
               

               
Conread position:
               
353-679
               

               
Cow position:
               
chr13:25453263-25453590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 57
               

               
Conread position:
               
353-679
               

               
Cow position:
               
chr13:34346197-34345873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
359-679
               

               
Cow position:
               
chr13:42215226-42215548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
375-670
               

               
Cow position:
               
chr13:47510017-47509724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 39
               

               
Conread position:
               
379-668
               

               
Cow position:
               
chr13:21126951-21126670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 16
               

               
Conread position:
               
381-677
               

               
Cow position:
               
chr13:40989196-40989495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
383-670
               

               
Cow position:
               
chr13:32826284-32825999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
383-671
               

               
Cow position:
               
chr13:48628397-48628117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
383-679
               

               
Cow position:
               
chr13:31607571-31607868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
384-670
               

               
Cow position:
               
chr13:52010456-52010178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
394-695
               

               
Cow position:
               
chr13:24729083-24729377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
399-679
               

               
Cow position:
               
chr13:9538086-9537806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
24, 11
               

               
Conread position:
               
413-679
               

               
Cow position:
               
chr13:59169710-59169976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
415-666
               

               
Cow position:
               
chr13:28569987-28570249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
422-670
               

               
Cow position:
               
chr13:14589686-14589930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
431-679
               

               
Cow position:
               
chr13:31637999-31638246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
63, 75
               

               
Conread position:
               
439-691
               

               
Cow position:
               
chr13:21282292-21282051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
24, 43
               

               
Conread position:
               
440-670
               

               
Cow position:
               
chr13:17439393-17439165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
28, 51
               

               
Conread position:
               
443-672
               

               
Cow position:
               
chr13:8652074-8651846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
451-668
               

               
Cow position:
               
chr13:52859226-52859421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
464-670
               

               
Cow position:
               
chr13:4420516-4420718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
466-679
               

               
Cow position:
               
chr13:5621612-5621824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
204, 24
               

               
Conread position:
               
471-679
               

               
Cow position:
               
chr13:11147975-11148182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 19
               

               
Conread position:
               
472-668
               

               
Cow position:
               
chr13:13222536-13222728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
489-679
               

               
Cow position:
               
chr13:2558281-2558090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
181, 127
               

               
Conread position:
               
489-679
               

               
Cow position:
               
chr13:4487613-4487424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
181, 114
               

               
Conread position:
               
492-668
               

               
Cow position:
               
chr13:2800643-2800469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
492-668
               

               
Cow position:
               
chr13:7465338-7465512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
492-670
               

               
Cow position:
               
chr13:5262115-5261942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
492-670
               

               
Cow position:
               
chr13:5278741-5278565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
492-670
               

               
Cow position:
               
chr13:14302228-14302404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
494-668
               

               
Cow position:
               
chr13:43974201-43974373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr13:17567754-17567581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr13:20597262-20597091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
495-695
               

               
Cow position:
               
chr13:31580575-31580386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
498-677
               

               
Cow position:
               
chr13:18003047-18002869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
170, 45
               

               
Conread position:
               
502-670
               

               
Cow position:
               
chr13:9570259-9570425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
502-670
               

               
Cow position:
               
chr13:14063256-14063090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
502-670
               

               
Cow position:
               
chr13:22780231-22780397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
502-670
               

               
Cow position:
               
chr13:43594846-43594676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
26, 112
               

               
Conread position:
               
504-665
               

               
Cow position:
               
chr13:8195350-8195510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
56, 113
               

               
Conread position:
               
504-670
               

               
Cow position:
               
chr13:23166628-23166462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
13, 114
               

               
Conread position:
               
505-670
               

               
Cow position:
               
chr13:2339799-2339963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
12, 112
               

               
Conread position:
               
505-679
               

               
Cow position:
               
chr13:11821561-11821735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
165, 110
               

               
Conread position:
               
507-670
               

               
Cow position:
               
chr13:35660032-35660193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
510-694
               

               
Cow position:
               
chr13:24099737-24099555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
512-670
               

               
Cow position:
               
chr13:53574252-53574406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
515-670
               

               
Cow position:
               
chr13:48038381-48038534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
528-670
               

               
Cow position:
               
chr13:11202490-11202630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
532-670
               

               
Cow position:
               
chr13:45073149-45073013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               
Show alignments to all cow chromosomes.