Cow genome map

Conread name: Mixn-0035g19

Conread position: 2-159
Cow position: chr6:17862693-17862538 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 129, 43

Conread position: 7-262
Cow position: chr6:61128674-61128931 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 33, 128

Conread position: 9-218
Cow position: chr6:50882853-50882650 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 165
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 32, 75

Conread position: 9-364
Cow position: chr6:48469257-48468931 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 243
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 335, 41

Conread position: 9-439
Cow position: chr6:60740286-60739859 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 302
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 9, 42

Conread position: 9-465
Cow position: chr6:35993858-35993394 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 79

Conread position: 9-574
Cow position: chr6:7130610-7131160 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 78

Conread position: 9-667
Cow position: chr6:5944025-5944681 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 421
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 40, 79

Conread position: 9-670
Cow position: chr6:67215020-67214359 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 22

Conread position: 10-152
Cow position: chr6:63409047-63409186 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 37

Conread position: 10-153
Cow position: chr6:61544136-61544282 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 9

Conread position: 10-179
Cow position: chr6:20548788-20548617 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 80

Conread position: 10-315
Cow position: chr6:20606240-20605930 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 45

Conread position: 11-168
Cow position: chr6:18615308-18615467 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 123

Conread position: 11-205
Cow position: chr6:10224463-10224274 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 71, 37

Conread position: 11-219
Cow position: chr6:32809565-32809350 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 6, 148

Conread position: 11-261
Cow position: chr6:18454079-18454316 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 77

Conread position: 11-309
Cow position: chr6:46331199-46330901 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 203
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 20

Conread position: 11-478
Cow position: chr6:6401213-6400753 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 75

Conread position: 11-487
Cow position: chr6:6098001-6098486 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 343
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 36, 75

Conread position: 11-679
Cow position: chr6:55039938-55040612 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 77

Conread position: 12-192
Cow position: chr6:35628315-35628141 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 42, 74

Conread position: 13-240
Cow position: chr6:139380-139597 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 73, 35

Conread position: 14-231
Cow position: chr6:38234503-38234289 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 41, 85

Conread position: 14-497
Cow position: chr6:67456985-67456488 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 72

Conread position: 15-667
Cow position: chr6:9750802-9751431 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 37

Conread position: 17-201
Cow position: chr6:54364487-54364685 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 69, 37

Conread position: 17-463
Cow position: chr6:37783668-37783234 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 72

Conread position: 20-197
Cow position: chr6:13326914-13327084 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 69

Conread position: 20-219
Cow position: chr6:3447989-3447799 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 34, 68

Conread position: 20-256
Cow position: chr6:21066609-21066852 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 33, 0

Conread position: 20-313
Cow position: chr6:35896089-35896362 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 27, 65

Conread position: 20-458
Cow position: chr6:30974316-30973866 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 68

Conread position: 20-584
Cow position: chr6:60057399-60057964 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 68

Conread position: 20-646
Cow position: chr6:54141060-54140465 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 68

Conread position: 20-670
Cow position: chr6:47339086-47339746 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 114

Conread position: 20-680
Cow position: chr6:35103047-35103718 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 416

Conread position: 21-591
Cow position: chr6:5609204-5609764 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 60

Conread position: 23-217
Cow position: chr6:46997528-46997723 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 63, 25

Conread position: 24-123
Cow position: chr6:66531533-66531634 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 24-256
Cow position: chr6:54349968-54349726 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 74

Conread position: 24-348
Cow position: chr6:21514351-21514666 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 211
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 63, 47

Conread position: 24-479
Cow position: chr6:37199281-37199741 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 24

Conread position: 25-236
Cow position: chr6:35702093-35702293 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 63

Conread position: 25-680
Cow position: chr6:5302168-5302794 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 56

Conread position: 26-232
Cow position: chr6:53513746-53513966 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 32-282
Cow position: chr6:49096201-49096445 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 57

Conread position: 43-516
Cow position: chr6:34475315-34475774 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 315
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 25, 71

Conread position: 45-249
Cow position: chr6:19507951-19508149 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 46-487
Cow position: chr6:38641735-38641294 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 61

Conread position: 47-416
Cow position: chr6:3080875-3081265 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 248
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 39, 84

Conread position: 48-212
Cow position: chr6:36516194-36516036 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 50-197
Cow position: chr6:63471473-63471322 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 50-322
Cow position: chr6:55535507-55535780 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 201
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 29, 87

Conread position: 51-546
Cow position: chr6:49421551-49422043 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 333
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 26, 15

Conread position: 59-244
Cow position: chr6:47676238-47676060 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 24, 0

Conread position: 61-403
Cow position: chr6:43134716-43135066 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 250
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 13, 31

Conread position: 68-668
Cow position: chr6:45690389-45690990 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 71-670
Cow position: chr6:6060358-6060940 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 59

Conread position: 75-219
Cow position: chr6:18440266-18440409 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 30

Conread position: 75-236
Cow position: chr6:45159846-45160006 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 37

Conread position: 75-244
Cow position: chr6:107210-107381 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 75-245
Cow position: chr6:36225319-36225151 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 37

Conread position: 75-253
Cow position: chr6:22876719-22876896 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 13, 30

Conread position: 75-303
Cow position: chr6:48379402-48379628 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 30, 16

Conread position: 75-314
Cow position: chr6:41014765-41015000 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 57

Conread position: 75-322
Cow position: chr6:5330623-5330379 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 12, 30

Conread position: 75-393
Cow position: chr6:10039935-10039609 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 218
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 11, 37

Conread position: 75-393
Cow position: chr6:46173049-46173370 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 221
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 29

Conread position: 75-404
Cow position: chr6:19045837-19045500 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 222
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 12, 58

Conread position: 75-408
Cow position: chr6:62670080-62669747 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 227
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 15, 202

Conread position: 75-421
Cow position: chr6:17313947-17313595 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 249
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 12, 37

Conread position: 75-437
Cow position: chr6:19446462-19446106 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 259
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 12, 30

Conread position: 75-459
Cow position: chr6:19013274-19012893 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 232
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 195, 60

Conread position: 75-530
Cow position: chr6:38853447-38853903 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 56

Conread position: 75-533
Cow position: chr6:15243048-15242588 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 30

Conread position: 75-670
Cow position: chr6:4468975-4468377 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 37

Conread position: 75-670
Cow position: chr6:8562927-8562333 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 30

Conread position: 75-689
Cow position: chr6:21004889-21004256 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 55

Conread position: 78-679
Cow position: chr6:7801189-7801758 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 21

Conread position: 79-314
Cow position: chr6:57089408-57089173 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 141, 34

Conread position: 79-504
Cow position: chr6:14949275-14949700 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 301
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 34, 8

Conread position: 80-412
Cow position: chr6:36189904-36189567 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 230
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 7, 31

Conread position: 81-310
Cow position: chr6:42567699-42567472 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 154
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 6, 31

Conread position: 81-614
Cow position: chr6:10176096-10176627 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 31

Conread position: 82-668
Cow position: chr6:18048820-18049406 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 78

Conread position: 82-670
Cow position: chr6:23696205-23695615 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 19

Conread position: 83-513
Cow position: chr6:8787833-8788268 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 299
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 20, 28

Conread position: 83-670
Cow position: chr6:35181054-35181629 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 24

Conread position: 84-524
Cow position: chr6:20097754-20098203 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 264
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 62, 214

Conread position: 85-404
Cow position: chr6:582070-582394 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 30, 47

Conread position: 85-471
Cow position: chr6:47799496-47799110 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 85-677
Cow position: chr6:6343633-6343030 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 57

Conread position: 86-245
Cow position: chr6:37603764-37603611 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 86-528
Cow position: chr6:54990799-54991235 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 310
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 45, 34

Conread position: 87-530
Cow position: chr6:1002063-1002479 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 402, 43

Conread position: 89-260
Cow position: chr6:60451624-60451455 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 89-670
Cow position: chr6:222262-222822 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 18

Conread position: 95-559
Cow position: chr6:65903434-65903891 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 294
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 192, 20

Conread position: 96-450
Cow position: chr6:16764455-16764809 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 254
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 123, 34

Conread position: 99-235
Cow position: chr6:32184859-32184995 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 99-418
Cow position: chr6:21235231-21234908 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 215
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 122, 32

Conread position: 101-339
Cow position: chr6:18144383-18144137 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 109, 30

Conread position: 101-344
Cow position: chr6:19131618-19131377 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 170

Conread position: 102-377
Cow position: chr6:3592582-3592305 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 151, 29

Conread position: 102-486
Cow position: chr6:66131489-66131105 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 274
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 119, 29

Conread position: 102-694
Cow position: chr6:46571291-46570719 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 153

Conread position: 103-271
Cow position: chr6:8600181-8600017 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 103-362
Cow position: chr6:60517011-60516754 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 57

Conread position: 103-430
Cow position: chr6:46282819-46283142 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 216
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 190, 172

Conread position: 103-435
Cow position: chr6:4691792-4692136 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 28

Conread position: 103-510
Cow position: chr6:46865406-46865824 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 173

Conread position: 104-679
Cow position: chr6:5095359-5095945 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 28

Conread position: 105-404
Cow position: chr6:38610147-38609845 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 214
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 27, 43

Conread position: 105-480
Cow position: chr6:5113874-5114244 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 267
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 211, 26

Conread position: 105-513
Cow position: chr6:67951131-67950731 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 26

Conread position: 105-572
Cow position: chr6:6201606-6201161 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 26

Conread position: 106-512
Cow position: chr6:38441352-38440955 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 278
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 164, 11

Conread position: 106-568
Cow position: chr6:6264835-6264363 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 25

Conread position: 106-693
Cow position: chr6:43345260-43345866 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 170

Conread position: 107-321
Cow position: chr6:56986471-56986675 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 107-446
Cow position: chr6:15243435-15243088 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 241
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 23

Conread position: 107-478
Cow position: chr6:12091811-12092179 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 252
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 41, 169

Conread position: 107-495
Cow position: chr6:17997141-17997528 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 24

Conread position: 107-635
Cow position: chr6:47305515-47304980 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 21

Conread position: 108-219
Cow position: chr6:44543971-44544080 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 108-259
Cow position: chr6:8468844-8468694 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 109-313
Cow position: chr6:24339459-24339261 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 93, 20

Conread position: 109-321
Cow position: chr6:55502946-55502735 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 13, 167

Conread position: 109-372
Cow position: chr6:17794586-17794847 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 207, 22

Conread position: 109-457
Cow position: chr6:60819690-60819341 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 207, 21

Conread position: 109-507
Cow position: chr6:38207314-38207717 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 22

Conread position: 109-645
Cow position: chr6:323129-323668 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 26

Conread position: 109-646
Cow position: chr6:445501-444968 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 23

Conread position: 109-668
Cow position: chr6:1886487-1887028 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 111

Conread position: 110-408
Cow position: chr6:53841329-53841626 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 190
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 200, 22

Conread position: 110-513
Cow position: chr6:44194373-44194773 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 274
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 194, 21

Conread position: 110-668
Cow position: chr6:40032367-40031812 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 21

Conread position: 110-670
Cow position: chr6:13367462-13366916 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 21

Conread position: 110-670
Cow position: chr6:39093925-39093380 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 18

Conread position: 111-219
Cow position: chr6:26408329-26408436 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 111-234
Cow position: chr6:35984961-35985083 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 18

Conread position: 111-245
Cow position: chr6:58076569-58076436 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 111-280
Cow position: chr6:21467092-21467256 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 111-286
Cow position: chr6:51530012-51530188 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 138, 20

Conread position: 111-291
Cow position: chr6:8731588-8731403 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 124, 18

Conread position: 111-292
Cow position: chr6:57079599-57079419 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 111-304
Cow position: chr6:32453560-32453373 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 28, 19

Conread position: 111-306
Cow position: chr6:20219601-20219794 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 5

Conread position: 111-324
Cow position: chr6:18608637-18608848 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 205, 19

Conread position: 111-333
Cow position: chr6:44867370-44867582 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 204, 19

Conread position: 111-359
Cow position: chr6:62437590-62437347 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 201, 18

Conread position: 111-381
Cow position: chr6:33509962-33509685 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 147, 20

Conread position: 111-399
Cow position: chr6:22850079-22850363 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 193
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 203, 43

Conread position: 111-440
Cow position: chr6:57546053-57546373 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 220
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 205, 20

Conread position: 111-446
Cow position: chr6:14914060-14914402 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 132, 18

Conread position: 111-456
Cow position: chr6:12669271-12668934 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 248
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 205, 44

Conread position: 111-458
Cow position: chr6:8125502-8125157 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 240
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 215, 20

Conread position: 111-478
Cow position: chr6:19695982-19695611 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 267
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 207, 18

Conread position: 111-501
Cow position: chr6:58304589-58304214 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 257
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 266, 21

Conread position: 111-508
Cow position: chr6:41733808-41733404 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 283
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 100, 19

Conread position: 111-517
Cow position: chr6:50984398-50983976 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 304
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 207, 40

Conread position: 111-540
Cow position: chr6:3952694-3952270 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 19

Conread position: 111-669
Cow position: chr6:18447342-18447895 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 20

Conread position: 112-245
Cow position: chr6:62478695-62478827 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 112-279
Cow position: chr6:48436004-48435844 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 112-424
Cow position: chr6:21399581-21399895 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 211
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 228, 18

Conread position: 112-429
Cow position: chr6:47832940-47833261 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 214
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 18

Conread position: 112-431
Cow position: chr6:54035968-54036283 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 203
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 179, 18

Conread position: 112-478
Cow position: chr6:52413034-52412659 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 18

Conread position: 112-487
Cow position: chr6:31261170-31260783 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 276
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 70, 18

Conread position: 112-496
Cow position: chr6:20157508-20157112 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 18

Conread position: 112-558
Cow position: chr6:50747172-50746704 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 18

Conread position: 112-679
Cow position: chr6:10331926-10332503 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 17

Conread position: 112-679
Cow position: chr6:16765226-16765787 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 31

Conread position: 113-271
Cow position: chr6:31865266-31865115 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 113-292
Cow position: chr6:21475900-21475722 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 164, 18

Conread position: 113-333
Cow position: chr6:13565260-13565042 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 170, 18

Conread position: 113-452
Cow position: chr6:11246941-11246595 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 244
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 83, 38

Conread position: 113-622
Cow position: chr6:28483190-28482679 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 19

Conread position: 113-627
Cow position: chr6:54867691-54867179 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 19

Conread position: 113-635
Cow position: chr6:15305744-15305241 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 17

Conread position: 113-669
Cow position: chr6:33302569-33302029 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 17

Conread position: 113-670
Cow position: chr6:25407216-25407787 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 46

Conread position: 114-239
Cow position: chr6:35654377-35654501 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 115-260
Cow position: chr6:66947650-66947790 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 115-438
Cow position: chr6:7128231-7128555 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 218
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 148, 39

Conread position: 115-505
Cow position: chr6:55282122-55282509 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 261
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 69, 16

Conread position: 115-562
Cow position: chr6:21535213-21534782 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 168

Conread position: 115-596
Cow position: chr6:46558227-46557747 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 14

Conread position: 115-669
Cow position: chr6:53932674-53933230 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 33

Conread position: 115-670
Cow position: chr6:56850190-56849613 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 16

Conread position: 116-314
Cow position: chr6:12965025-12964829 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 25

Conread position: 116-359
Cow position: chr6:2153428-2153671 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 200, 15

Conread position: 116-408
Cow position: chr6:50467306-50467008 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 199
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 104, 14

Conread position: 116-513
Cow position: chr6:60350119-60350527 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 179

Conread position: 116-665
Cow position: chr6:1770026-1770572 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 14

Conread position: 116-668
Cow position: chr6:48567183-48567726 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 14

Conread position: 117-246
Cow position: chr6:15058546-15058418 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 117-280
Cow position: chr6:9718744-9718904 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 117-314
Cow position: chr6:22525499-22525309 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 117-333
Cow position: chr6:37395230-37395450 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 60, 14

Conread position: 117-458
Cow position: chr6:59104772-59104433 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 227
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 83, 13

Conread position: 117-512
Cow position: chr6:37149359-37148968 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 14

Conread position: 117-670
Cow position: chr6:6067531-6068071 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 14

Conread position: 117-670
Cow position: chr6:39358170-39358718 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 162

Conread position: 117-678
Cow position: chr6:67187854-67187305 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 14

Conread position: 117-695
Cow position: chr6:32126225-32125663 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 14

Conread position: 117-695
Cow position: chr6:64432108-64431543 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 13

Conread position: 118-283
Cow position: chr6:39138045-39137879 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 152, 0

Conread position: 118-423
Cow position: chr6:16316485-16316169 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 85, 13

Conread position: 119-438
Cow position: chr6:67323477-67323161 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 216
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 177, 11

Conread position: 119-475
Cow position: chr6:65264378-65264727 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 250
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 231, 11

Conread position: 119-480
Cow position: chr6:528117-528475 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 254
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 197, 16

Conread position: 119-592
Cow position: chr6:15937685-15938171 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 144

Conread position: 119-666
Cow position: chr6:17557548-17556996 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 21

Conread position: 122-478
Cow position: chr6:63720367-63720004 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 242
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 37

Conread position: 122-670
Cow position: chr6:28976874-28977432 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 239

Conread position: 123-294
Cow position: chr6:58608281-58608451 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 76, 9

Conread position: 123-504
Cow position: chr6:35436159-35435784 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 253
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 227, 152

Conread position: 128-562
Cow position: chr6:51387910-51387489 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 293
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 39, 147

Conread position: 129-671
Cow position: chr6:36652581-36652040 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 23

Conread position: 130-258
Cow position: chr6:46841368-46841496 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 130-322
Cow position: chr6:2585100-2584910 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 145, 0

Conread position: 130-349
Cow position: chr6:67451213-67451430 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 146
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 145, 0

Conread position: 130-502
Cow position: chr6:8966255-8965873 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 265
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 142, 168

Conread position: 130-558
Cow position: chr6:42961205-42961640 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 90

Conread position: 130-670
Cow position: chr6:11169861-11169325 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 101

Conread position: 130-679
Cow position: chr6:17414287-17414848 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 166

Conread position: 131-278
Cow position: chr6:10488116-10488260 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 131-324
Cow position: chr6:47958969-47958779 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 91

Conread position: 131-479
Cow position: chr6:16191828-16191471 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 254
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 139, 65

Conread position: 131-487
Cow position: chr6:15300678-15301021 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 253
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 210, 16

Conread position: 131-556
Cow position: chr6:16352197-16352590 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 117

Conread position: 131-635
Cow position: chr6:35990077-35990574 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 141

Conread position: 131-637
Cow position: chr6:26728377-26728879 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 10

Conread position: 131-646
Cow position: chr6:2547413-2546885 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 297

Conread position: 131-662
Cow position: chr6:38771437-38770930 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 89

Conread position: 131-670
Cow position: chr6:10612998-10612474 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 89

Conread position: 131-670
Cow position: chr6:29210645-29210119 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 23

Conread position: 132-296
Cow position: chr6:67805859-67806024 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 153, 0

Conread position: 132-322
Cow position: chr6:55417372-55417558 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 112, 151

Conread position: 132-409
Cow position: chr6:31814593-31814865 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 181
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 224, 154

Conread position: 132-554
Cow position: chr6:61515037-61515466 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 45

Conread position: 132-609
Cow position: chr6:19681369-19681840 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 238

Conread position: 132-664
Cow position: chr6:42565843-42565308 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 22

Conread position: 132-670
Cow position: chr6:49398463-49399000 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 124

Conread position: 133-578
Cow position: chr6:38218821-38218372 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 41

Conread position: 135-324
Cow position: chr6:44623763-44623574 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 149

Conread position: 135-465
Cow position: chr6:47575059-47574723 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 236
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 179, 140

Conread position: 135-508
Cow position: chr6:46860015-46860390 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 254
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 173, 19

Conread position: 135-513
Cow position: chr6:63298878-63299258 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 252
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 180, 140

Conread position: 135-592
Cow position: chr6:47520206-47519744 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 151

Conread position: 135-607
Cow position: chr6:9008459-9008929 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 91

Conread position: 135-636
Cow position: chr6:55475408-55474901 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 131

Conread position: 135-670
Cow position: chr6:143222-143742 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 349
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 199, 98

Conread position: 137-408
Cow position: chr6:60667561-60667294 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 184
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 204, 40

Conread position: 140-307
Cow position: chr6:13053945-13053778 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 81, 145

Conread position: 140-344
Cow position: chr6:37463170-37462961 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 140, 0

Conread position: 140-479
Cow position: chr6:32268740-32269066 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 222
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 198, 80

Conread position: 140-679
Cow position: chr6:32122056-32121503 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 146

Conread position: 141-694
Cow position: chr6:14696218-14696778 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 152

Conread position: 142-506
Cow position: chr6:51893354-51893734 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 258
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 172, 140

Conread position: 143-377
Cow position: chr6:7119474-7119706 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 173, 142

Conread position: 143-465
Cow position: chr6:27888496-27888168 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 232
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 140, 195

Conread position: 143-668
Cow position: chr6:24031521-24030994 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 69

Conread position: 143-670
Cow position: chr6:18988354-18987837 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 79

Conread position: 143-677
Cow position: chr6:12551415-12550878 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 80

Conread position: 144-512
Cow position: chr6:66874493-66874135 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 259
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 172, 22

Conread position: 144-586
Cow position: chr6:31526190-31525751 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 128

Conread position: 144-650
Cow position: chr6:4864403-4864901 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 79

Conread position: 145-545
Cow position: chr6:7989274-7989677 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 276
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 75, 9

Conread position: 147-404
Cow position: chr6:20206416-20206153 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 169, 123

Conread position: 149-582
Cow position: chr6:63272473-63272914 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 37

Conread position: 150-489
Cow position: chr6:32517742-32518080 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 221
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 248, 136

Conread position: 157-679
Cow position: chr6:51718840-51718310 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 33

Conread position: 160-635
Cow position: chr6:28083894-28084361 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 313
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 92, 53

Conread position: 167-439
Cow position: chr6:55763974-55763698 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 149, 58

Conread position: 172-514
Cow position: chr6:49002624-49002953 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 226
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 203, 47

Conread position: 172-670
Cow position: chr6:10695976-10695477 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 17

Conread position: 173-574
Cow position: chr6:19329652-19330043 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 32

Conread position: 174-507
Cow position: chr6:38614926-38614602 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 138, 40

Conread position: 177-668
Cow position: chr6:65711926-65711446 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 110

Conread position: 179-678
Cow position: chr6:28810889-28811396 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 92

Conread position: 180-679
Cow position: chr6:42519096-42518575 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 10

Conread position: 181-445
Cow position: chr6:12542824-12543095 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 135, 10

Conread position: 183-668
Cow position: chr6:59597753-59597276 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 30

Conread position: 184-679
Cow position: chr6:34549506-34549010 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 317
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 248, 165

Conread position: 186-668
Cow position: chr6:6642506-6642966 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 61

Conread position: 186-695
Cow position: chr6:48170040-48169541 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 89

Conread position: 191-670
Cow position: chr6:62924899-62925383 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 86

Conread position: 196-662
Cow position: chr6:8804439-8804918 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 30

Conread position: 196-666
Cow position: chr6:9323236-9322761 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 27

Conread position: 196-670
Cow position: chr6:44099178-44098705 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 22

Conread position: 199-670
Cow position: chr6:25359151-25358694 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 91

Conread position: 223-676
Cow position: chr6:13741752-13741306 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 78

Conread position: 226-670
Cow position: chr6:38234021-38233609 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 307
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 324, 48

Conread position: 227-670
Cow position: chr6:34076090-34075643 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 56

Conread position: 227-677
Cow position: chr6:24652133-24652573 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 55

Conread position: 232-677
Cow position: chr6:5957972-5958408 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 43

Conread position: 235-669
Cow position: chr6:9732786-9733213 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 59

Conread position: 240-504
Cow position: chr6:5462010-5462267 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 102, 50

Conread position: 241-670
Cow position: chr6:60456876-60456448 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 124

Conread position: 242-489
Cow position: chr6:52025604-52025861 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 76, 48

Conread position: 242-670
Cow position: chr6:53345836-53345413 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 33

Conread position: 247-670
Cow position: chr6:47540559-47540142 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 20

Conread position: 248-671
Cow position: chr6:10254273-10253837 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 303
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 70, 49

Conread position: 300-668
Cow position: chr6:4948928-4948561 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 62

Conread position: 302-670
Cow position: chr6:60018044-60017690 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 57

Conread position: 306-670
Cow position: chr6:8753332-8753691 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 37

Conread position: 317-478
Cow position: chr6:33277009-33276844 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 96

Conread position: 317-670
Cow position: chr6:16737986-16737638 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 106

Conread position: 317-670
Cow position: chr6:23986782-23987122 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 245
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 194, 22

Conread position: 317-670
Cow position: chr6:46667078-46666724 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 101

Conread position: 317-677
Cow position: chr6:10605654-10605291 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 94

Conread position: 317-679
Cow position: chr6:1783811-1784160 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 45

Conread position: 317-679
Cow position: chr6:50119820-50120181 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 77

Conread position: 320-667
Cow position: chr6:180403-180743 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 244
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 102, 40

Conread position: 320-668
Cow position: chr6:14225225-14225574 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 97

Conread position: 320-668
Cow position: chr6:44145830-44146182 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 242
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 29, 95

Conread position: 320-670
Cow position: chr6:9737152-9737497 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 58

Conread position: 320-670
Cow position: chr6:55388854-55388504 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 97

Conread position: 320-679
Cow position: chr6:27173961-27173596 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 62

Conread position: 320-679
Cow position: chr6:58748178-58747816 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 44

Conread position: 321-679
Cow position: chr6:27525892-27526250 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 40

Conread position: 321-695
Cow position: chr6:12623432-12623067 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 94

Conread position: 322-668
Cow position: chr6:41232572-41232231 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 39

Conread position: 322-670
Cow position: chr6:56440967-56441313 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 22

Conread position: 324-677
Cow position: chr6:67429925-67430282 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 17, 40

Conread position: 324-679
Cow position: chr6:38872418-38872773 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 87

Conread position: 325-679
Cow position: chr6:41193460-41193102 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 249
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 16, 39

Conread position: 325-695
Cow position: chr6:42931150-42931500 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 260
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 11, 38

Conread position: 334-670
Cow position: chr6:41823877-41824211 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 12

Conread position: 335-668
Cow position: chr6:66566404-66566075 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 25

Conread position: 335-670
Cow position: chr6:46205959-46205635 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 69

Conread position: 335-670
Cow position: chr6:64721237-64720914 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 241
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 92, 25

Conread position: 335-677
Cow position: chr6:32915980-32916312 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 23

Conread position: 335-679
Cow position: chr6:11720829-11721173 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 25

Conread position: 335-679
Cow position: chr6:20552155-20552498 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 239
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 88, 29

Conread position: 335-679
Cow position: chr6:35872640-35872980 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 241
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 86, 25

Conread position: 341-668
Cow position: chr6:126016-126339 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 21

Conread position: 341-695
Cow position: chr6:14063723-14064062 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 345-670
Cow position: chr6:2088598-2088276 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 218
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 158, 60

Conread position: 353-677
Cow position: chr6:17865468-17865147 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 44

Conread position: 353-679
Cow position: chr6:8206268-8205942 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 57

Conread position: 353-679
Cow position: chr6:44578468-44578789 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 48

Conread position: 353-679
Cow position: chr6:51877839-51877510 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 230
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 226, 57

Conread position: 354-668
Cow position: chr6:3444744-3445048 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 69, 56

Conread position: 355-679
Cow position: chr6:11868857-11869182 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 60

Conread position: 356-669
Cow position: chr6:6470846-6471152 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 55

Conread position: 358-667
Cow position: chr6:33921330-33921633 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 207
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 103, 60

Conread position: 358-670
Cow position: chr6:33865169-33865473 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 228
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 67, 52

Conread position: 358-679
Cow position: chr6:2185426-2185747 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 52

Conread position: 359-668
Cow position: chr6:9321360-9321049 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 51, 137

Conread position: 359-668
Cow position: chr6:9742241-9741934 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 55

Conread position: 359-668
Cow position: chr6:13494015-13494324 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 64, 51

Conread position: 359-668
Cow position: chr6:54201968-54202275 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 220
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 64, 51

Conread position: 359-668
Cow position: chr6:67403292-67403599 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 218
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 64, 55

Conread position: 359-679
Cow position: chr6:2074567-2074253 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 311, 59

Conread position: 360-670
Cow position: chr6:37331882-37331579 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 227
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 189, 50

Conread position: 369-668
Cow position: chr6:3885440-3885738 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 41

Conread position: 375-667
Cow position: chr6:68272218-68272501 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 35

Conread position: 382-679
Cow position: chr6:181490-181787 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 216
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 41, 28

Conread position: 383-694
Cow position: chr6:66303949-66304245 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 384-679
Cow position: chr6:6596477-6596192 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 217
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 105, 26

Conread position: 385-680
Cow position: chr6:56502205-56501916 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 34

Conread position: 388-665
Cow position: chr6:42416734-42416465 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 388-667
Cow position: chr6:46585183-46584904 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 35, 22

Conread position: 388-668
Cow position: chr6:2090305-2090027 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 34, 22

Conread position: 391-668
Cow position: chr6:3271435-3271712 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 32, 19

Conread position: 391-679
Cow position: chr6:8599679-8599393 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 19

Conread position: 394-670
Cow position: chr6:42106164-42106429 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 171
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 68, 0

Conread position: 403-670
Cow position: chr6:52215873-52216138 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 100, 11

Conread position: 403-670
Cow position: chr6:52235364-52235629 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 100, 11

Conread position: 409-667
Cow position: chr6:68252661-68252404 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 84

Conread position: 416-677
Cow position: chr6:20245950-20245691 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 8

Conread position: 422-670
Cow position: chr6:58390013-58390257 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 65, 0

Conread position: 422-689
Cow position: chr6:62015506-62015242 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 68

Conread position: 454-677
Cow position: chr6:63094636-63094414 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 215, 35

Conread position: 457-671
Cow position: chr6:59296604-59296401 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 464-670
Cow position: chr6:63252074-63252282 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 111, 150

Conread position: 469-679
Cow position: chr6:49445080-49444873 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 201, 14

Conread position: 470-670
Cow position: chr6:40774558-40774752 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 24, 0

Conread position: 471-668
Cow position: chr6:15310051-15310244 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 19

Conread position: 481-670
Cow position: chr6:31927849-31927667 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 156
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 9, 0

Conread position: 484-670
Cow position: chr6:479496-479313 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 5, 0

Conread position: 489-666
Cow position: chr6:89309-89484 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 123, 0

Conread position: 489-670
Cow position: chr6:59687546-59687362 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 8, 57

Conread position: 491-670
Cow position: chr6:34115810-34115633 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 146
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 125, 0

Conread position: 492-648
Cow position: chr6:5462486-5462636 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 78, 0

Conread position: 492-668
Cow position: chr6:34494611-34494437 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 111, 0

Conread position: 492-670
Cow position: chr6:3484463-3484639 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 124, 0

Conread position: 492-679
Cow position: chr6:46246312-46246490 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 178, 40

Conread position: 494-666
Cow position: chr6:21396281-21396447 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 494-679
Cow position: chr6:15182675-15182493 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 74, 18

Conread position: 498-670
Cow position: chr6:19695329-19695159 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 113, 0

Conread position: 498-670
Cow position: chr6:61136952-61136785 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 27, 0

Conread position: 499-679
Cow position: chr6:39330596-39330777 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 171, 119

Conread position: 500-670
Cow position: chr6:540069-539903 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 92

Conread position: 502-665
Cow position: chr6:43788740-43788895 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 502-670
Cow position: chr6:47640714-47640885 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 104, 128

Conread position: 502-676
Cow position: chr6:57384283-57384112 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 168, 28

Conread position: 502-679
Cow position: chr6:12100370-12100193 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 54, 66

Conread position: 502-690
Cow position: chr6:49685342-49685160 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 116, 0

Conread position: 502-695
Cow position: chr6:29484895-29484708 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 114, 0

Conread position: 502-695
Cow position: chr6:66874111-66873924 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 151
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 114, 0

Conread position: 504-666
Cow position: chr6:42742525-42742367 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 504-670
Cow position: chr6:19045119-19044956 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 504-677
Cow position: chr6:17345128-17344952 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 52, 111

Conread position: 506-676
Cow position: chr6:68049029-68048859 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 164, 97

Conread position: 509-670
Cow position: chr6:26914871-26914715 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 510-679
Cow position: chr6:24659178-24659344 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 141, 36

Conread position: 512-679
Cow position: chr6:50983956-50983788 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 160, 104

Conread position: 515-670
Cow position: chr6:51581623-51581777 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 91, 102

Conread position: 519-679
Cow position: chr6:47988827-47988666 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 130, 92

Conread position: 522-669
Cow position: chr6:50114609-50114464 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 88, 0

Conread position: 552-668
Cow position: chr6:55170346-55170232 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 59, 0

Show alignments to all cow chromosomes.