Cow genome map
| Conread name: | Mixn-0035n12 |
| Conread position: | 1-409 |
| Cow position: | chr10:51779246-51778830 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 137, 77 |
| Conread position: | 1-498 |
| Cow position: | chr10:4994775-4994264 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 340 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 49, 72 |
| Conread position: | 1-623 |
| Cow position: | chr10:11275449-11276078 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 55 |
| Conread position: | 4-612 |
| Cow position: | chr10:69250314-69250930 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 410 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 37, 91 |
| Conread position: | 11-532 |
| Cow position: | chr10:57405142-57404605 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 189 |
| Conread position: | 56-408 |
| Cow position: | chr10:15618915-15618570 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 40 |
| Conread position: | 80-380 |
| Cow position: | chr10:22843551-22843863 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 80-463 |
| Cow position: | chr10:41637521-41637906 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 32 |
| Conread position: | 88-257 |
| Cow position: | chr10:52815111-52815282 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 65 |
| Conread position: | 88-621 |
| Cow position: | chr10:16669491-16668937 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 16 |
| Conread position: | 90-532 |
| Cow position: | chr10:67050592-67051010 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 224, 21 |
| Conread position: | 93-390 |
| Cow position: | chr10:33605406-33605101 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 39, 52 |
| Conread position: | 94-350 |
| Cow position: | chr10:24077760-24077497 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 47, 10 |
| Conread position: | 94-605 |
| Cow position: | chr10:1351822-1352339 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 49 |
| Conread position: | 94-621 |
| Cow position: | chr10:68979462-68979931 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 353 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 73, 18 |
| Conread position: | 97-548 |
| Cow position: | chr10:31219880-31220356 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 318 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 10, 55 |
| Conread position: | 102-622 |
| Cow position: | chr10:22455085-22455604 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 56 |
| Conread position: | 103-622 |
| Cow position: | chr10:68204206-68203681 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 341 |
| Conread position: | 164-441 |
| Cow position: | chr10:12875859-12875577 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 100, 227 |
| Conread position: | 168-489 |
| Cow position: | chr10:48193724-48193399 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 167 |
| Conread position: | 170-532 |
| Cow position: | chr10:28566290-28565920 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 282 |
| Conread position: | 191-425 |
| Cow position: | chr10:48313094-48312852 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 78, 234 |
| Conread position: | 193-571 |
| Cow position: | chr10:22860175-22859794 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 22 |
| Conread position: | 194-602 |
| Cow position: | chr10:43061130-43060706 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 304 |
| Conread position: | 199-531 |
| Cow position: | chr10:45650661-45650976 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 243 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 55, 76 |
| Conread position: | 199-621 |
| Cow position: | chr10:37428689-37428279 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 8 |
| Conread position: | 201-616 |
| Cow position: | chr10:767789-767386 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 113 |
| Conread position: | 202-624 |
| Cow position: | chr10:3317850-3318286 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 254 |
| Conread position: | 239-622 |
| Cow position: | chr10:23880123-23879747 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 18 |
| Conread position: | 265-621 |
| Cow position: | chr10:38472255-38472616 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 266 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 37, 191 |
| Conread position: | 302-575 |
| Cow position: | chr10:48208692-48208426 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 28, 136 |
| Conread position: | 304-548 |
| Cow position: | chr10:60243062-60243301 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 88, 139 |
| Conread position: | 314-625 |
| Cow position: | chr10:12199114-12199422 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 126 |
| Conread position: | 327-621 |
| Cow position: | chr10:53375156-53374881 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 65, 12 |
| Conread position: | 328-623 |
| Cow position: | chr10:18862996-18863276 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 340-621 |
| Cow position: | chr10:27222901-27223179 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 219 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 23, 96 |
| Conread position: | 389-624 |
| Cow position: | chr10:17923204-17923432 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 158, 44 |
| Conread position: | 391-624 |
| Cow position: | chr10:17415698-17415480 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 202, 22 |
| Conread position: | 400-581 |
| Cow position: | chr10:55438082-55437910 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 439-622 |
| Cow position: | chr10:15824301-15824120 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 151, 13 |
Show alignments to all cow chromosomes.