Cow genome map
Conread name: | Mixn-0035n12 |
Conread position: | 1-390 |
Cow position: | chr11:17192493-17192087 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 265 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 40, 84 |
Conread position: | 5-619 |
Cow position: | chr11:77772890-77772278 (view UCSC Genome Browser custom track) |
Alignm length: | 634 |
Alignm identity: | 415 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 48 |
Conread position: | 5-622 |
Cow position: | chr11:5221625-5221013 (view UCSC Genome Browser custom track) |
Alignm length: | 639 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 48 |
Conread position: | 5-623 |
Cow position: | chr11:35252191-35251569 (view UCSC Genome Browser custom track) |
Alignm length: | 643 |
Alignm identity: | 447 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 40 |
Conread position: | 10-519 |
Cow position: | chr11:60822924-60822417 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 341 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 28, 79 |
Conread position: | 57-624 |
Cow position: | chr11:82528741-82529280 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 76 |
Conread position: | 73-377 |
Cow position: | chr11:33103778-33103475 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 211 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 186, 67 |
Conread position: | 80-329 |
Cow position: | chr11:12896869-12897121 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 184 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 18, 109 |
Conread position: | 80-588 |
Cow position: | chr11:51177378-51177860 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 31 |
Conread position: | 80-623 |
Cow position: | chr11:24007955-24008515 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 29 |
Conread position: | 88-615 |
Cow position: | chr11:25807870-25807326 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 16 |
Conread position: | 94-369 |
Cow position: | chr11:21121145-21121414 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 189 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 50, 17 |
Conread position: | 94-409 |
Cow position: | chr11:9971094-9970776 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 220 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 171, 56 |
Conread position: | 94-620 |
Cow position: | chr11:10877129-10877669 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 144 |
Conread position: | 94-622 |
Cow position: | chr11:69491298-69491835 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 355 |
Conread position: | 96-622 |
Cow position: | chr11:57061770-57062282 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 45 |
Conread position: | 97-410 |
Cow position: | chr11:23738884-23738577 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 231 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 161, 44 |
Conread position: | 98-624 |
Cow position: | chr11:43831901-43831387 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 44 |
Conread position: | 116-620 |
Cow position: | chr11:77756850-77756344 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 26 |
Conread position: | 142-415 |
Cow position: | chr11:25972974-25972696 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 14 |
Conread position: | 144-409 |
Cow position: | chr11:1775097-1774826 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 194 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 112, 12 |
Conread position: | 145-418 |
Cow position: | chr11:12790739-12791017 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 200 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 18, 205 |
Conread position: | 149-622 |
Cow position: | chr11:40574820-40574354 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 31 |
Conread position: | 157-388 |
Cow position: | chr11:43435084-43435325 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 165 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 161-588 |
Cow position: | chr11:9423866-9424299 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 61 |
Conread position: | 165-588 |
Cow position: | chr11:52859415-52859850 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 306 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 99, 291 |
Conread position: | 170-624 |
Cow position: | chr11:55119446-55119888 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 168 |
Conread position: | 190-621 |
Cow position: | chr11:39831240-39830806 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 73 |
Conread position: | 191-623 |
Cow position: | chr11:18154268-18153827 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 30 |
Conread position: | 221-455 |
Cow position: | chr11:7130957-7131206 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 172 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 33, 71 |
Conread position: | 274-618 |
Cow position: | chr11:57153593-57153249 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 181 |
Conread position: | 275-563 |
Cow position: | chr11:34265479-34265759 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 209 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 27, 80 |
Conread position: | 275-621 |
Cow position: | chr11:34303534-34303885 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 167 |
Conread position: | 277-599 |
Cow position: | chr11:34024634-34024966 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 230 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 25, 52 |
Conread position: | 284-621 |
Cow position: | chr11:21893390-21893067 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 254 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 18, 32 |
Conread position: | 287-624 |
Cow position: | chr11:34761632-34761312 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 152 |
Conread position: | 303-429 |
Cow position: | chr11:74171598-74171472 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 102 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 303-625 |
Cow position: | chr11:77820165-77819855 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 231 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 246, 38 |
Conread position: | 304-621 |
Cow position: | chr11:22851139-22851457 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 245 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 93, 142 |
Conread position: | 310-623 |
Cow position: | chr11:57753280-57752960 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 232 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 85, 10 |
Conread position: | 358-622 |
Cow position: | chr11:34397638-34397896 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 193 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 48, 92 |
Conread position: | 373-621 |
Cow position: | chr11:18452969-18452729 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 191 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 21, 59 |
Conread position: | 389-623 |
Cow position: | chr11:21525339-21525557 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 166 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 201, 24 |
Conread position: | 389-627 |
Cow position: | chr11:21544244-21544470 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 165 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 201, 48 |
Conread position: | 391-620 |
Cow position: | chr11:8087959-8087743 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 173 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 161, 46 |
Conread position: | 391-622 |
Cow position: | chr11:58793804-58793590 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 171 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 161, 72 |
Conread position: | 482-625 |
Cow position: | chr11:58579885-58580031 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 115 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 67, 7 |
Show alignments to all cow chromosomes.