Cow genome map

Conread name: Mixn-0035n12

Conread position: 1-390
Cow position: chr11:17192493-17192087 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 265
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 84

Conread position: 5-619
Cow position: chr11:77772890-77772278 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 48

Conread position: 5-622
Cow position: chr11:5221625-5221013 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 48

Conread position: 5-623
Cow position: chr11:35252191-35251569 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 40

Conread position: 10-519
Cow position: chr11:60822924-60822417 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 341
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 79

Conread position: 57-624
Cow position: chr11:82528741-82529280 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 76

Conread position: 73-377
Cow position: chr11:33103778-33103475 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 211
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 186, 67

Conread position: 80-329
Cow position: chr11:12896869-12897121 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 18, 109

Conread position: 80-588
Cow position: chr11:51177378-51177860 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 31

Conread position: 80-623
Cow position: chr11:24007955-24008515 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 29

Conread position: 88-615
Cow position: chr11:25807870-25807326 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 16

Conread position: 94-369
Cow position: chr11:21121145-21121414 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 17

Conread position: 94-409
Cow position: chr11:9971094-9970776 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 220
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 171, 56

Conread position: 94-620
Cow position: chr11:10877129-10877669 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 144

Conread position: 94-622
Cow position: chr11:69491298-69491835 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 355

Conread position: 96-622
Cow position: chr11:57061770-57062282 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 45

Conread position: 97-410
Cow position: chr11:23738884-23738577 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 231
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 161, 44

Conread position: 98-624
Cow position: chr11:43831901-43831387 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 44

Conread position: 116-620
Cow position: chr11:77756850-77756344 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 26

Conread position: 142-415
Cow position: chr11:25972974-25972696 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 14

Conread position: 144-409
Cow position: chr11:1775097-1774826 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 112, 12

Conread position: 145-418
Cow position: chr11:12790739-12791017 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 18, 205

Conread position: 149-622
Cow position: chr11:40574820-40574354 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 31

Conread position: 157-388
Cow position: chr11:43435084-43435325 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 161-588
Cow position: chr11:9423866-9424299 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 61

Conread position: 165-588
Cow position: chr11:52859415-52859850 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 306
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 99, 291

Conread position: 170-624
Cow position: chr11:55119446-55119888 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 168

Conread position: 190-621
Cow position: chr11:39831240-39830806 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 73

Conread position: 191-623
Cow position: chr11:18154268-18153827 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 30

Conread position: 221-455
Cow position: chr11:7130957-7131206 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 71

Conread position: 274-618
Cow position: chr11:57153593-57153249 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 181

Conread position: 275-563
Cow position: chr11:34265479-34265759 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 27, 80

Conread position: 275-621
Cow position: chr11:34303534-34303885 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 167

Conread position: 277-599
Cow position: chr11:34024634-34024966 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 52

Conread position: 284-621
Cow position: chr11:21893390-21893067 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 254
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 18, 32

Conread position: 287-624
Cow position: chr11:34761632-34761312 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 152

Conread position: 303-429
Cow position: chr11:74171598-74171472 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 303-625
Cow position: chr11:77820165-77819855 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 231
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 246, 38

Conread position: 304-621
Cow position: chr11:22851139-22851457 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 245
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 93, 142

Conread position: 310-623
Cow position: chr11:57753280-57752960 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 232
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 85, 10

Conread position: 358-622
Cow position: chr11:34397638-34397896 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 48, 92

Conread position: 373-621
Cow position: chr11:18452969-18452729 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 191
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 21, 59

Conread position: 389-623
Cow position: chr11:21525339-21525557 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 201, 24

Conread position: 389-627
Cow position: chr11:21544244-21544470 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 201, 48

Conread position: 391-620
Cow position: chr11:8087959-8087743 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 161, 46

Conread position: 391-622
Cow position: chr11:58793804-58793590 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 161, 72

Conread position: 482-625
Cow position: chr11:58579885-58580031 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 67, 7

Show alignments to all cow chromosomes.