Cow genome map
| Conread name: | Mixn-0035n12 |
| Conread position: | 2-408 |
| Cow position: | chr13:22276989-22277421 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 295 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 27, 99 |
| Conread position: | 4-248 |
| Cow position: | chr13:34333766-34334016 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 17, 156 |
| Conread position: | 10-624 |
| Cow position: | chr13:55406495-55407107 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 55 |
| Conread position: | 80-262 |
| Cow position: | chr13:46465062-46464877 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 37 |
| Conread position: | 80-378 |
| Cow position: | chr13:47591049-47591342 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 27, 47 |
| Conread position: | 80-423 |
| Cow position: | chr13:1368111-1367755 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 165, 24 |
| Conread position: | 92-397 |
| Cow position: | chr13:43384544-43384862 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 233 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 52, 9 |
| Conread position: | 93-373 |
| Cow position: | chr13:24373489-24373214 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 172, 19 |
| Conread position: | 93-570 |
| Cow position: | chr13:37497644-37498115 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 139 |
| Conread position: | 93-621 |
| Cow position: | chr13:12325021-12325537 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 105 |
| Conread position: | 94-390 |
| Cow position: | chr13:8960451-8960157 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 134, 36 |
| Conread position: | 98-390 |
| Cow position: | chr13:46637048-46637341 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 125 |
| Conread position: | 99-618 |
| Cow position: | chr13:39487259-39487768 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 57 |
| Conread position: | 111-622 |
| Cow position: | chr13:45497198-45497717 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 33 |
| Conread position: | 127-396 |
| Cow position: | chr13:46349458-46349732 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 27, 12 |
| Conread position: | 156-623 |
| Cow position: | chr13:38535404-38534952 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 227 |
| Conread position: | 163-454 |
| Cow position: | chr13:38362293-38361990 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 289 |
| Conread position: | 177-621 |
| Cow position: | chr13:34265086-34264657 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 69 |
| Conread position: | 190-541 |
| Cow position: | chr13:30951648-30951328 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 219-620 |
| Cow position: | chr13:19115466-19115853 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 293 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 42, 9 |
| Conread position: | 231-621 |
| Cow position: | chr13:34885019-34885417 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 112 |
| Conread position: | 259-623 |
| Cow position: | chr13:34336350-34336691 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 55, 66 |
| Conread position: | 260-620 |
| Cow position: | chr13:46464731-46464386 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 24 |
| Conread position: | 267-621 |
| Cow position: | chr13:24675762-24676105 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 258 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 33, 131 |
| Conread position: | 275-545 |
| Cow position: | chr13:9103801-9103547 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 9, 155 |
| Conread position: | 286-441 |
| Cow position: | chr13:11441464-11441622 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 302-518 |
| Cow position: | chr13:59997899-59997688 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 90, 114 |
| Conread position: | 302-548 |
| Cow position: | chr13:62271996-62271764 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 93, 126 |
| Conread position: | 302-622 |
| Cow position: | chr13:51240859-51241166 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 135 |
| Conread position: | 302-625 |
| Cow position: | chr13:47325773-47325446 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 159 |
| Conread position: | 312-424 |
| Cow position: | chr13:25699421-25699531 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 313-621 |
| Cow position: | chr13:25955477-25955185 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 235, 49 |
| Conread position: | 319-622 |
| Cow position: | chr13:17169346-17169636 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 81, 119 |
| Conread position: | 330-620 |
| Cow position: | chr13:44144256-44143968 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 62, 109 |
| Conread position: | 362-623 |
| Cow position: | chr13:21878498-21878238 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 38, 90 |
| Conread position: | 364-577 |
| Cow position: | chr13:18839113-18839323 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 36, 78 |
| Conread position: | 377-625 |
| Cow position: | chr13:26943003-26943249 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 60, 84 |
| Conread position: | 388-621 |
| Cow position: | chr13:20656543-20656768 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 158, 46 |
| Conread position: | 388-621 |
| Cow position: | chr13:43803135-43803364 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 9, 52 |
| Conread position: | 389-622 |
| Cow position: | chr13:28605624-28605857 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 51, 63 |
| Conread position: | 389-625 |
| Cow position: | chr13:33239730-33239960 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 150, 43 |
| Conread position: | 403-621 |
| Cow position: | chr13:43385026-43385236 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 187, 70 |
| Conread position: | 471-626 |
| Cow position: | chr13:5619393-5619236 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 78, 22 |
| Conread position: | 490-620 |
| Cow position: | chr13:27844103-27843976 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 107, 11 |
Show alignments to all cow chromosomes.