Cow genome map

Conread name: Mixn-0035n12

Conread position: 1-364
Cow position: chr15:21801888-21802263 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 263
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 40, 107

Conread position: 1-389
Cow position: chr15:19781815-19781432 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 255
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 36, 62

Conread position: 1-396
Cow position: chr15:18715512-18715119 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 254
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 80

Conread position: 1-453
Cow position: chr15:40065418-40065886 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 20

Conread position: 4-601
Cow position: chr15:9072150-9072779 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 465

Conread position: 4-626
Cow position: chr15:10580874-10581513 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 347

Conread position: 55-622
Cow position: chr15:53712373-53712937 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 33

Conread position: 80-381
Cow position: chr15:11289267-11288964 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 217
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 58, 24

Conread position: 80-622
Cow position: chr15:23265346-23265875 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 24

Conread position: 80-625
Cow position: chr15:37470401-37469863 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 68

Conread position: 88-622
Cow position: chr15:6523859-6523347 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 352
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 15, 167

Conread position: 89-626
Cow position: chr15:52868402-52868921 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 35

Conread position: 90-397
Cow position: chr15:17150323-17150625 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 201
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 63

Conread position: 92-356
Cow position: chr15:5912850-5912583 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 75, 58

Conread position: 92-392
Cow position: chr15:1893105-1892804 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 196
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 43, 59

Conread position: 93-390
Cow position: chr15:22713647-22713953 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 48, 63

Conread position: 93-390
Cow position: chr15:43275107-43275412 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 197
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 72

Conread position: 95-625
Cow position: chr15:44797708-44797163 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 65

Conread position: 97-407
Cow position: chr15:4623657-4623346 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 162, 39

Conread position: 116-528
Cow position: chr15:31918388-31917977 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 295
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 22, 269

Conread position: 157-403
Cow position: chr15:39288434-39288178 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 104, 210

Conread position: 158-615
Cow position: chr15:37492054-37491609 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 249

Conread position: 161-615
Cow position: chr15:53728622-53728182 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 96

Conread position: 162-398
Cow position: chr15:14811551-14811316 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 102, 114

Conread position: 178-620
Cow position: chr15:25683346-25683796 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 293

Conread position: 230-620
Cow position: chr15:18403646-18404025 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 274
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 31, 150

Conread position: 250-623
Cow position: chr15:11997471-11997850 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 8

Conread position: 260-393
Cow position: chr15:14974439-14974304 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 260-416
Cow position: chr15:35041828-35041985 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 42, 142

Conread position: 260-622
Cow position: chr15:37633098-37633463 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 244
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 41, 232

Conread position: 299-453
Cow position: chr15:4721322-4721472 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 67

Conread position: 302-532
Cow position: chr15:50243104-50243321 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 47

Conread position: 302-624
Cow position: chr15:27971989-27971675 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 231
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 90, 142

Conread position: 304-417
Cow position: chr15:30569947-30570064 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 363-623
Cow position: chr15:12048894-12048636 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 86

Conread position: 384-620
Cow position: chr15:1887947-1888173 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 17

Conread position: 387-621
Cow position: chr15:578929-579158 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 125, 47

Conread position: 406-623
Cow position: chr15:35042276-35042482 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 112, 32

Conread position: 445-625
Cow position: chr15:16669501-16669323 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 451-624
Cow position: chr15:36864629-36864453 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 101, 39

Conread position: 465-622
Cow position: chr15:8630281-8630440 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 87, 25

Conread position: 482-621
Cow position: chr15:9437459-9437603 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 54, 9

Show alignments to all cow chromosomes.