Cow genome map
| Conread name: | Mixn-0035n12 |
| Conread position: | 1-453 |
| Cow position: | chr16:37442321-37441856 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 325 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 69, 29 |
| Conread position: | 1-454 |
| Cow position: | chr16:17867667-17867208 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 107 |
| Conread position: | 1-553 |
| Cow position: | chr16:36911224-36910672 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 26 |
| Conread position: | 1-620 |
| Cow position: | chr16:43851019-43850402 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 75 |
| Conread position: | 4-397 |
| Cow position: | chr16:23747768-23747384 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 60 |
| Conread position: | 4-623 |
| Cow position: | chr16:41680957-41680329 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 160 |
| Conread position: | 5-625 |
| Cow position: | chr16:23035483-23034869 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 285 |
| Conread position: | 10-622 |
| Cow position: | chr16:22786233-22785609 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 452 |
| Conread position: | 42-529 |
| Cow position: | chr16:19152557-19153047 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 19 |
| Conread position: | 45-621 |
| Cow position: | chr16:30572745-30572198 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 382 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 222, 108 |
| Conread position: | 46-288 |
| Cow position: | chr16:5132021-5131778 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 76-623 |
| Cow position: | chr16:13043713-13044280 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 28 |
| Conread position: | 80-403 |
| Cow position: | chr16:19445676-19446000 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 16, 43 |
| Conread position: | 80-488 |
| Cow position: | chr16:341158-341555 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 62, 85 |
| Conread position: | 80-614 |
| Cow position: | chr16:12243667-12243121 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 381 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 20, 37 |
| Conread position: | 80-622 |
| Cow position: | chr16:15508836-15509362 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 17 |
| Conread position: | 93-416 |
| Cow position: | chr16:5593343-5593662 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 44, 23 |
| Conread position: | 94-253 |
| Cow position: | chr16:14441801-14441961 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 17 |
| Conread position: | 94-413 |
| Cow position: | chr16:47728930-47729257 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 47, 65 |
| Conread position: | 94-448 |
| Cow position: | chr16:52814267-52813919 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 260 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 49, 18 |
| Conread position: | 94-455 |
| Cow position: | chr16:15734486-15734846 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 22 |
| Conread position: | 94-621 |
| Cow position: | chr16:14799836-14799307 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 109 |
| Conread position: | 95-397 |
| Cow position: | chr16:4825953-4825652 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 48, 66 |
| Conread position: | 97-432 |
| Cow position: | chr16:45551743-45552080 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 74 |
| Conread position: | 98-574 |
| Cow position: | chr16:29205129-29204670 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 323 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 165, 65 |
| Conread position: | 113-393 |
| Cow position: | chr16:45157549-45157269 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 15, 42 |
| Conread position: | 132-621 |
| Cow position: | chr16:47781244-47781729 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 199-423 |
| Cow position: | chr16:4856475-4856238 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 66, 43 |
| Conread position: | 210-424 |
| Cow position: | chr16:2375980-2375761 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 92, 39 |
| Conread position: | 222-626 |
| Cow position: | chr16:16118490-16118892 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 135 |
| Conread position: | 258-464 |
| Cow position: | chr16:11161489-11161693 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 56, 134 |
| Conread position: | 258-577 |
| Cow position: | chr16:31375100-31374787 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 38, 88 |
| Conread position: | 258-600 |
| Cow position: | chr16:53516554-53516221 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 165, 84 |
| Conread position: | 263-575 |
| Cow position: | chr16:14443992-14444294 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 171 |
| Conread position: | 302-455 |
| Cow position: | chr16:5131633-5131479 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 98, 139 |
| Conread position: | 316-624 |
| Cow position: | chr16:42405995-42406294 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 82, 17 |
| Conread position: | 341-458 |
| Cow position: | chr16:6031480-6031359 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 371-615 |
| Cow position: | chr16:48894632-48894398 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 175, 45 |
| Conread position: | 387-622 |
| Cow position: | chr16:3742937-3742705 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 76, 56 |
| Conread position: | 391-627 |
| Cow position: | chr16:45057615-45057842 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 159, 61 |
| Conread position: | 407-621 |
| Cow position: | chr16:9703387-9703181 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 175, 31 |
| Conread position: | 449-621 |
| Cow position: | chr16:2371540-2371373 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 101, 39 |
| Conread position: | 457-615 |
| Cow position: | chr16:23878609-23878769 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 24 |
Show alignments to all cow chromosomes.