Cow genome map
| Conread name: | Mixn-0035n12 |
| Conread position: | 1-281 |
| Cow position: | chr18:34021165-34021449 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-350 |
| Cow position: | chr18:16258643-16258996 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 187, 46 |
| Conread position: | 1-529 |
| Cow position: | chr18:48549767-48550291 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 56 |
| Conread position: | 1-621 |
| Cow position: | chr18:32860422-32861049 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 78 |
| Conread position: | 4-445 |
| Cow position: | chr18:29224456-29224928 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 77 |
| Conread position: | 7-623 |
| Cow position: | chr18:28085352-28085975 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 66 |
| Conread position: | 55-524 |
| Cow position: | chr18:8170025-8170486 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 74 |
| Conread position: | 94-284 |
| Cow position: | chr18:22434060-22433866 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 47, 27 |
| Conread position: | 94-323 |
| Cow position: | chr18:23317235-23316998 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 44, 65 |
| Conread position: | 94-402 |
| Cow position: | chr18:21291136-21290815 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 94-625 |
| Cow position: | chr18:22065478-22064964 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 96-411 |
| Cow position: | chr18:23669393-23669065 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 48, 313 |
| Conread position: | 113-422 |
| Cow position: | chr18:31393487-31393798 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 29 |
| Conread position: | 158-411 |
| Cow position: | chr18:1062068-1061820 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 119, 146 |
| Conread position: | 243-462 |
| Cow position: | chr18:8204559-8204778 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 59, 15 |
| Conread position: | 261-532 |
| Cow position: | chr18:27404950-27405217 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 134, 41 |
| Conread position: | 264-510 |
| Cow position: | chr18:32300586-32300825 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 192, 66 |
| Conread position: | 273-625 |
| Cow position: | chr18:35471744-35471402 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 189 |
| Conread position: | 299-621 |
| Cow position: | chr18:22433701-22433387 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 56, 65 |
| Conread position: | 302-570 |
| Cow position: | chr18:23504511-23504249 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 88, 142 |
| Conread position: | 302-622 |
| Cow position: | chr18:1700683-1700980 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 72 |
| Conread position: | 313-623 |
| Cow position: | chr18:53028804-53029110 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 54, 133 |
| Conread position: | 345-621 |
| Cow position: | chr18:16259394-16259662 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 205, 65 |
| Conread position: | 389-619 |
| Cow position: | chr18:33896014-33896238 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 158, 47 |
| Conread position: | 391-621 |
| Cow position: | chr18:50880661-50880880 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 58 |
| Conread position: | 392-604 |
| Cow position: | chr18:21290593-21290390 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 158, 46 |
| Conread position: | 451-627 |
| Cow position: | chr18:16539142-16539319 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 98, 32 |
| Conread position: | 457-626 |
| Cow position: | chr18:53047822-53047651 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 93, 26 |
Show alignments to all cow chromosomes.